Multiple sequence alignment - TraesCS2A01G331300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G331300 chr2A 100.000 4482 0 0 1 4482 564263128 564267609 0.000000e+00 8277.0
1 TraesCS2A01G331300 chr2A 92.697 178 12 1 1 178 98897585 98897409 5.750000e-64 255.0
2 TraesCS2A01G331300 chr2A 96.341 82 3 0 1703 1784 576496534 576496615 7.820000e-28 135.0
3 TraesCS2A01G331300 chr2A 89.423 104 10 1 1862 1965 53597337 53597439 3.640000e-26 130.0
4 TraesCS2A01G331300 chr2A 86.726 113 10 2 1860 1972 750586555 750586448 2.190000e-23 121.0
5 TraesCS2A01G331300 chr2B 91.042 2534 187 23 1964 4482 497877540 497875032 0.000000e+00 3386.0
6 TraesCS2A01G331300 chr2B 87.561 619 41 20 172 778 497879285 497878691 0.000000e+00 684.0
7 TraesCS2A01G331300 chr2B 86.644 599 39 15 782 1377 497878643 497878083 3.810000e-175 625.0
8 TraesCS2A01G331300 chr2B 85.784 204 12 5 1374 1562 497878047 497877846 2.730000e-47 200.0
9 TraesCS2A01G331300 chr2B 96.296 81 2 1 1780 1859 497877623 497877543 1.010000e-26 132.0
10 TraesCS2A01G331300 chr2D 90.389 2414 155 34 1964 4372 424000554 423998213 0.000000e+00 3101.0
11 TraesCS2A01G331300 chr2D 94.165 617 21 10 174 778 424007786 424007173 0.000000e+00 926.0
12 TraesCS2A01G331300 chr2D 89.351 601 44 9 782 1377 424007125 424006540 0.000000e+00 737.0
13 TraesCS2A01G331300 chr2D 94.798 173 9 0 1 173 68920504 68920676 2.050000e-68 270.0
14 TraesCS2A01G331300 chr2D 91.549 142 9 2 1576 1715 424006233 424006093 4.580000e-45 193.0
15 TraesCS2A01G331300 chr2D 83.636 220 14 7 1374 1577 424006504 424006291 2.130000e-43 187.0
16 TraesCS2A01G331300 chr2D 85.593 118 13 3 1864 1979 406969899 406969784 2.190000e-23 121.0
17 TraesCS2A01G331300 chr2D 91.837 49 3 1 1780 1827 424006067 424006019 2.890000e-07 67.6
18 TraesCS2A01G331300 chr1A 93.143 175 12 0 1 175 355717841 355718015 1.600000e-64 257.0
19 TraesCS2A01G331300 chr1A 96.386 83 0 2 1704 1783 343396815 343396733 2.810000e-27 134.0
20 TraesCS2A01G331300 chr1A 88.679 106 9 3 1862 1965 15435269 15435373 4.710000e-25 126.0
21 TraesCS2A01G331300 chr1D 93.064 173 12 0 1 173 491721646 491721474 2.070000e-63 254.0
22 TraesCS2A01G331300 chr1D 90.566 106 7 3 1862 1965 14482518 14482414 2.170000e-28 137.0
23 TraesCS2A01G331300 chr5D 93.064 173 11 1 1 173 363885141 363884970 7.440000e-63 252.0
24 TraesCS2A01G331300 chr5D 93.064 173 11 1 1 173 535902029 535902200 7.440000e-63 252.0
25 TraesCS2A01G331300 chr1B 91.398 186 11 5 1 182 120889391 120889207 2.680000e-62 250.0
26 TraesCS2A01G331300 chrUn 91.667 180 13 1 1 178 8098626 8098805 9.630000e-62 248.0
27 TraesCS2A01G331300 chr4D 92.529 174 11 1 1 174 498379266 498379437 9.630000e-62 248.0
28 TraesCS2A01G331300 chr5B 90.826 109 6 2 1858 1966 315893443 315893339 4.670000e-30 143.0
29 TraesCS2A01G331300 chr7A 89.908 109 9 1 1858 1966 516148409 516148303 6.050000e-29 139.0
30 TraesCS2A01G331300 chr7A 95.294 85 3 1 1700 1783 32944407 32944491 2.810000e-27 134.0
31 TraesCS2A01G331300 chr7A 93.333 90 2 3 1695 1784 636957145 636957060 3.640000e-26 130.0
32 TraesCS2A01G331300 chr7A 93.182 88 5 1 1697 1783 730748295 730748208 1.310000e-25 128.0
33 TraesCS2A01G331300 chr3A 98.718 78 1 0 1706 1783 265543452 265543375 6.050000e-29 139.0
34 TraesCS2A01G331300 chr6D 97.500 80 2 0 1704 1783 464671978 464671899 2.170000e-28 137.0
35 TraesCS2A01G331300 chr3D 98.684 76 0 1 1712 1787 572131001 572131075 2.810000e-27 134.0
36 TraesCS2A01G331300 chr4A 89.423 104 11 0 1862 1965 521842062 521842165 1.010000e-26 132.0
37 TraesCS2A01G331300 chr3B 88.889 108 11 1 1861 1968 248580832 248580726 1.010000e-26 132.0
38 TraesCS2A01G331300 chr3B 83.654 104 13 4 1681 1783 526694720 526694820 1.330000e-15 95.3
39 TraesCS2A01G331300 chr6A 96.154 78 3 0 1706 1783 477910886 477910809 1.310000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G331300 chr2A 564263128 564267609 4481 False 8277.00 8277 100.0000 1 4482 1 chr2A.!!$F2 4481
1 TraesCS2A01G331300 chr2B 497875032 497879285 4253 True 1005.40 3386 89.4654 172 4482 5 chr2B.!!$R1 4310
2 TraesCS2A01G331300 chr2D 423998213 424000554 2341 True 3101.00 3101 90.3890 1964 4372 1 chr2D.!!$R2 2408
3 TraesCS2A01G331300 chr2D 424006019 424007786 1767 True 422.12 926 90.1076 174 1827 5 chr2D.!!$R3 1653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.037326 TTCGGCTCGCTTCAGTGATT 60.037 50.0 0.0 0.0 33.67 2.57 F
946 1023 0.316841 TTCAGGGCATTTGAAACGGC 59.683 50.0 0.0 0.0 31.98 5.68 F
1876 2112 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.0 0.0 0.0 0.00 4.37 F
2847 3085 0.036105 TCGCTTGGATGTGTCTGCAT 60.036 50.0 0.0 0.0 0.00 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 2095 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.00 0.00 2.73 R
2820 3058 0.110486 ACATCCAAGCGAACAGGGTT 59.890 50.0 0.00 0.00 0.00 4.11 R
2863 3101 0.396811 GACCACCTGCACTACCAAGT 59.603 55.0 0.00 0.00 35.91 3.16 R
3979 4225 0.251073 AAATCTCGTGGTTACCCGGG 59.749 55.0 22.25 22.25 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.917760 CGAGGGAGGGGCGATGAC 61.918 72.222 0.00 0.00 0.00 3.06
28 29 2.764128 GAGGGAGGGGCGATGACA 60.764 66.667 0.00 0.00 0.00 3.58
29 30 2.765807 AGGGAGGGGCGATGACAG 60.766 66.667 0.00 0.00 0.00 3.51
30 31 4.554036 GGGAGGGGCGATGACAGC 62.554 72.222 0.00 0.00 0.00 4.40
31 32 4.899239 GGAGGGGCGATGACAGCG 62.899 72.222 9.11 9.11 35.00 5.18
32 33 4.899239 GAGGGGCGATGACAGCGG 62.899 72.222 15.74 0.00 35.00 5.52
40 41 4.704833 ATGACAGCGGCGCACCTT 62.705 61.111 35.02 14.65 0.00 3.50
51 52 3.491652 GCACCTTCGGCTCGCTTC 61.492 66.667 0.00 0.00 0.00 3.86
52 53 2.048222 CACCTTCGGCTCGCTTCA 60.048 61.111 0.00 0.00 0.00 3.02
53 54 2.097038 CACCTTCGGCTCGCTTCAG 61.097 63.158 0.00 0.00 0.00 3.02
54 55 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
55 56 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
56 57 1.080501 CTTCGGCTCGCTTCAGTGA 60.081 57.895 0.00 0.00 0.00 3.41
57 58 0.459237 CTTCGGCTCGCTTCAGTGAT 60.459 55.000 0.00 0.00 33.67 3.06
58 59 0.037326 TTCGGCTCGCTTCAGTGATT 60.037 50.000 0.00 0.00 33.67 2.57
59 60 0.737367 TCGGCTCGCTTCAGTGATTG 60.737 55.000 0.00 0.00 33.67 2.67
60 61 1.016130 CGGCTCGCTTCAGTGATTGT 61.016 55.000 0.00 0.00 33.67 2.71
61 62 1.735700 CGGCTCGCTTCAGTGATTGTA 60.736 52.381 0.00 0.00 33.67 2.41
62 63 1.929836 GGCTCGCTTCAGTGATTGTAG 59.070 52.381 0.00 0.00 33.67 2.74
63 64 2.611518 GCTCGCTTCAGTGATTGTAGT 58.388 47.619 0.00 0.00 33.67 2.73
64 65 2.996621 GCTCGCTTCAGTGATTGTAGTT 59.003 45.455 0.00 0.00 33.67 2.24
65 66 3.181526 GCTCGCTTCAGTGATTGTAGTTG 60.182 47.826 0.00 0.00 33.67 3.16
66 67 3.990092 TCGCTTCAGTGATTGTAGTTGT 58.010 40.909 0.00 0.00 0.00 3.32
67 68 3.987868 TCGCTTCAGTGATTGTAGTTGTC 59.012 43.478 0.00 0.00 0.00 3.18
68 69 3.740832 CGCTTCAGTGATTGTAGTTGTCA 59.259 43.478 0.00 0.00 0.00 3.58
69 70 4.376413 CGCTTCAGTGATTGTAGTTGTCAC 60.376 45.833 0.00 0.00 41.88 3.67
76 77 4.929808 GTGATTGTAGTTGTCACTAGGTGG 59.070 45.833 0.00 0.00 39.24 4.61
77 78 4.591498 TGATTGTAGTTGTCACTAGGTGGT 59.409 41.667 0.00 0.00 36.09 4.16
78 79 4.595762 TTGTAGTTGTCACTAGGTGGTC 57.404 45.455 0.00 0.00 36.09 4.02
79 80 3.840991 TGTAGTTGTCACTAGGTGGTCT 58.159 45.455 0.00 0.00 36.09 3.85
80 81 4.989277 TGTAGTTGTCACTAGGTGGTCTA 58.011 43.478 0.00 0.00 36.09 2.59
81 82 4.763793 TGTAGTTGTCACTAGGTGGTCTAC 59.236 45.833 0.00 1.20 36.09 2.59
82 83 2.818432 AGTTGTCACTAGGTGGTCTACG 59.182 50.000 0.00 0.00 33.87 3.51
83 84 1.830279 TGTCACTAGGTGGTCTACGG 58.170 55.000 0.00 0.00 33.87 4.02
84 85 1.352017 TGTCACTAGGTGGTCTACGGA 59.648 52.381 0.00 0.00 33.87 4.69
85 86 2.025605 TGTCACTAGGTGGTCTACGGAT 60.026 50.000 0.00 0.00 33.87 4.18
86 87 3.022406 GTCACTAGGTGGTCTACGGATT 58.978 50.000 0.00 0.00 33.87 3.01
87 88 3.446516 GTCACTAGGTGGTCTACGGATTT 59.553 47.826 0.00 0.00 33.87 2.17
88 89 3.446161 TCACTAGGTGGTCTACGGATTTG 59.554 47.826 0.00 0.00 33.87 2.32
89 90 2.764572 ACTAGGTGGTCTACGGATTTGG 59.235 50.000 0.00 0.00 0.00 3.28
90 91 1.946984 AGGTGGTCTACGGATTTGGA 58.053 50.000 0.00 0.00 0.00 3.53
91 92 2.478292 AGGTGGTCTACGGATTTGGAT 58.522 47.619 0.00 0.00 0.00 3.41
92 93 2.170607 AGGTGGTCTACGGATTTGGATG 59.829 50.000 0.00 0.00 0.00 3.51
93 94 2.093128 GGTGGTCTACGGATTTGGATGT 60.093 50.000 0.00 0.00 0.00 3.06
94 95 3.133362 GGTGGTCTACGGATTTGGATGTA 59.867 47.826 0.00 0.00 0.00 2.29
95 96 4.383335 GGTGGTCTACGGATTTGGATGTAA 60.383 45.833 0.00 0.00 0.00 2.41
96 97 5.365619 GTGGTCTACGGATTTGGATGTAAT 58.634 41.667 0.00 0.00 0.00 1.89
97 98 5.820947 GTGGTCTACGGATTTGGATGTAATT 59.179 40.000 0.00 0.00 0.00 1.40
98 99 6.317893 GTGGTCTACGGATTTGGATGTAATTT 59.682 38.462 0.00 0.00 0.00 1.82
99 100 6.887545 TGGTCTACGGATTTGGATGTAATTTT 59.112 34.615 0.00 0.00 0.00 1.82
100 101 7.394923 TGGTCTACGGATTTGGATGTAATTTTT 59.605 33.333 0.00 0.00 0.00 1.94
101 102 8.895737 GGTCTACGGATTTGGATGTAATTTTTA 58.104 33.333 0.00 0.00 0.00 1.52
130 131 8.683550 TTTCTAGTGTTCGTTGTACTATCATG 57.316 34.615 0.00 0.00 0.00 3.07
131 132 7.619964 TCTAGTGTTCGTTGTACTATCATGA 57.380 36.000 0.00 0.00 0.00 3.07
132 133 8.221965 TCTAGTGTTCGTTGTACTATCATGAT 57.778 34.615 13.81 13.81 0.00 2.45
133 134 8.683615 TCTAGTGTTCGTTGTACTATCATGATT 58.316 33.333 14.65 0.00 0.00 2.57
134 135 7.757097 AGTGTTCGTTGTACTATCATGATTC 57.243 36.000 14.65 3.54 0.00 2.52
135 136 7.320399 AGTGTTCGTTGTACTATCATGATTCA 58.680 34.615 14.65 6.06 0.00 2.57
136 137 7.817478 AGTGTTCGTTGTACTATCATGATTCAA 59.183 33.333 14.65 11.36 0.00 2.69
137 138 8.110612 GTGTTCGTTGTACTATCATGATTCAAG 58.889 37.037 14.65 7.97 0.00 3.02
138 139 8.032451 TGTTCGTTGTACTATCATGATTCAAGA 58.968 33.333 14.65 10.38 0.00 3.02
139 140 8.869897 GTTCGTTGTACTATCATGATTCAAGAA 58.130 33.333 14.65 14.24 0.00 2.52
140 141 8.634475 TCGTTGTACTATCATGATTCAAGAAG 57.366 34.615 14.65 6.44 0.00 2.85
141 142 8.466798 TCGTTGTACTATCATGATTCAAGAAGA 58.533 33.333 14.65 10.61 0.00 2.87
142 143 9.087424 CGTTGTACTATCATGATTCAAGAAGAA 57.913 33.333 14.65 0.00 41.28 2.52
152 153 9.910267 TCATGATTCAAGAAGAATAGATTGGAA 57.090 29.630 0.00 0.00 46.76 3.53
154 155 9.917887 ATGATTCAAGAAGAATAGATTGGAAGT 57.082 29.630 0.00 0.00 46.76 3.01
155 156 9.745018 TGATTCAAGAAGAATAGATTGGAAGTT 57.255 29.630 0.00 0.00 46.76 2.66
205 206 3.394719 GAGGAAAGAAGAAGCACGAACT 58.605 45.455 0.00 0.00 0.00 3.01
227 234 2.359975 AAGGTAGCAAGCGTGGCC 60.360 61.111 0.00 0.00 0.00 5.36
253 260 3.787001 GGGAGAGAAGGGCACGGG 61.787 72.222 0.00 0.00 0.00 5.28
290 298 0.433492 CGCACTTTAACGACCGTGAG 59.567 55.000 0.00 0.00 0.00 3.51
295 303 2.099592 ACTTTAACGACCGTGAGTGTGA 59.900 45.455 0.00 0.00 0.00 3.58
338 346 3.523157 TGGTCCAGAGGATCAATTGCTAA 59.477 43.478 0.00 0.00 40.22 3.09
624 634 2.710377 TGATTGGTTGAATCCCTCGTG 58.290 47.619 0.00 0.00 40.00 4.35
665 675 4.037565 ACTCGTTATTCGACATAGATGCCA 59.962 41.667 0.00 0.00 44.01 4.92
757 778 5.428184 TGTGGGAAAAACTGGACAAAATT 57.572 34.783 0.00 0.00 0.00 1.82
780 845 7.408132 TTTATGAGAAAGTGAGCATATACGC 57.592 36.000 0.00 0.00 0.00 4.42
813 878 2.844451 GCTGCCGTTCAGGTGCAAA 61.844 57.895 0.00 0.00 43.06 3.68
835 900 6.469782 AACCATATATGCTTGTGGAAAAGG 57.530 37.500 7.24 0.00 35.69 3.11
836 901 4.895297 ACCATATATGCTTGTGGAAAAGGG 59.105 41.667 7.24 0.00 35.69 3.95
838 903 2.230130 TATGCTTGTGGAAAAGGGGG 57.770 50.000 0.00 0.00 0.00 5.40
875 940 4.018779 TGGGGTGGGTTAGATTTAAGTGAG 60.019 45.833 0.00 0.00 0.00 3.51
901 978 6.602179 ACTTCATTTTGTATCACACATGTCG 58.398 36.000 0.00 0.00 36.90 4.35
937 1014 1.547372 GCACATCAACTTCAGGGCATT 59.453 47.619 0.00 0.00 0.00 3.56
939 1016 3.581755 CACATCAACTTCAGGGCATTTG 58.418 45.455 0.00 0.00 0.00 2.32
940 1017 3.256383 CACATCAACTTCAGGGCATTTGA 59.744 43.478 0.00 0.00 0.00 2.69
941 1018 3.896888 ACATCAACTTCAGGGCATTTGAA 59.103 39.130 0.00 0.00 33.76 2.69
942 1019 4.344679 ACATCAACTTCAGGGCATTTGAAA 59.655 37.500 0.00 0.00 34.41 2.69
943 1020 4.320608 TCAACTTCAGGGCATTTGAAAC 57.679 40.909 0.00 0.00 34.41 2.78
944 1021 3.052036 CAACTTCAGGGCATTTGAAACG 58.948 45.455 0.00 0.00 34.41 3.60
945 1022 1.613437 ACTTCAGGGCATTTGAAACGG 59.387 47.619 0.00 0.00 34.41 4.44
946 1023 0.316841 TTCAGGGCATTTGAAACGGC 59.683 50.000 0.00 0.00 31.98 5.68
974 1051 6.206243 CACACCAATTTGGCCAAATAAATCAA 59.794 34.615 37.45 14.16 42.67 2.57
1003 1080 1.001181 CACCAACTTCAGGGCAAATGG 59.999 52.381 0.00 0.00 0.00 3.16
1023 1100 4.601084 TGGTAAAAAGTCCTGTTTCACCA 58.399 39.130 6.96 6.96 34.45 4.17
1140 1217 4.436998 CCACGTCACCCTCTCGCC 62.437 72.222 0.00 0.00 0.00 5.54
1162 1239 4.162888 CCGGTTCACTAAAGGTATTACCCT 59.837 45.833 9.31 0.09 39.75 4.34
1186 1263 7.364232 CCTGATCCAGACAGTAAACACTATCTT 60.364 40.741 0.00 0.00 32.44 2.40
1189 1266 6.464222 TCCAGACAGTAAACACTATCTTTGG 58.536 40.000 0.00 0.00 0.00 3.28
1229 1306 7.507616 ACCCTGTTATATTTTCTTGTGTTTGGA 59.492 33.333 0.00 0.00 0.00 3.53
1230 1307 8.364142 CCCTGTTATATTTTCTTGTGTTTGGAA 58.636 33.333 0.00 0.00 0.00 3.53
1231 1308 9.927668 CCTGTTATATTTTCTTGTGTTTGGAAT 57.072 29.630 0.00 0.00 0.00 3.01
1266 1343 8.247562 ACTCTACTCATCTGAAGAACATGTTAC 58.752 37.037 11.95 6.98 0.00 2.50
1277 1354 9.950680 CTGAAGAACATGTTACTGTTGTTTTAT 57.049 29.630 11.95 0.00 41.19 1.40
1394 1551 5.373222 TGTGCACTTGACAATTTAGTAGGT 58.627 37.500 19.41 0.00 0.00 3.08
1431 1588 3.737559 TTCCATTTACAGGCATCTGGT 57.262 42.857 0.00 0.00 44.99 4.00
1433 1590 4.422073 TCCATTTACAGGCATCTGGTAG 57.578 45.455 0.00 0.00 44.99 3.18
1451 1608 4.398988 TGGTAGTTTGATCATTGATGGTGC 59.601 41.667 3.32 0.00 0.00 5.01
1476 1634 6.077838 GTGCACGTTGTCTAAGGAAAATTAG 58.922 40.000 0.00 0.00 34.63 1.73
1490 1648 6.248433 AGGAAAATTAGATCACAAAGAGGCA 58.752 36.000 0.00 0.00 0.00 4.75
1503 1675 3.391506 AAGAGGCAAGAAAATGGTTGC 57.608 42.857 0.00 0.00 46.88 4.17
1597 1830 9.944376 TCTTCTAGCATGGACCAAATATATAAC 57.056 33.333 0.00 0.00 0.00 1.89
1616 1849 2.086869 ACCACATGATCAAGCTTTCCG 58.913 47.619 0.00 0.00 0.00 4.30
1627 1860 8.506168 TGATCAAGCTTTCCGATTTTTATAGT 57.494 30.769 0.00 0.00 0.00 2.12
1628 1861 8.612619 TGATCAAGCTTTCCGATTTTTATAGTC 58.387 33.333 0.00 0.00 0.00 2.59
1629 1862 7.915293 TCAAGCTTTCCGATTTTTATAGTCA 57.085 32.000 0.00 0.00 0.00 3.41
1630 1863 8.330466 TCAAGCTTTCCGATTTTTATAGTCAA 57.670 30.769 0.00 0.00 0.00 3.18
1631 1864 8.450964 TCAAGCTTTCCGATTTTTATAGTCAAG 58.549 33.333 0.00 0.00 0.00 3.02
1632 1865 6.786207 AGCTTTCCGATTTTTATAGTCAAGC 58.214 36.000 0.00 0.00 34.43 4.01
1690 1925 3.913163 AGGACCTTTGAGATGAGAACCTT 59.087 43.478 0.00 0.00 0.00 3.50
1715 1950 6.735130 AGCTGGTTTAATTGTTCTGTTGTAC 58.265 36.000 0.00 0.00 0.00 2.90
1717 1952 6.856426 GCTGGTTTAATTGTTCTGTTGTACTC 59.144 38.462 0.00 0.00 0.00 2.59
1718 1953 7.266922 TGGTTTAATTGTTCTGTTGTACTCC 57.733 36.000 0.00 0.00 0.00 3.85
1719 1954 6.263617 TGGTTTAATTGTTCTGTTGTACTCCC 59.736 38.462 0.00 0.00 0.00 4.30
1721 1956 7.308408 GGTTTAATTGTTCTGTTGTACTCCCTC 60.308 40.741 0.00 0.00 0.00 4.30
1722 1957 3.764237 TTGTTCTGTTGTACTCCCTCC 57.236 47.619 0.00 0.00 0.00 4.30
1724 1959 1.617357 GTTCTGTTGTACTCCCTCCGT 59.383 52.381 0.00 0.00 0.00 4.69
1726 1961 1.891150 TCTGTTGTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
1727 1962 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
1729 1964 1.345415 GTTGTACTCCCTCCGTTCCAA 59.655 52.381 0.00 0.00 0.00 3.53
1731 1966 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
1734 1969 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1735 1970 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1736 1971 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
1738 1973 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
1740 1975 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
1741 1976 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
1742 1977 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1743 1978 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1744 1979 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1745 1980 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1746 1981 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1747 1982 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
1748 1983 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
1749 1984 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
1750 1985 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
1751 1986 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
1752 1987 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
1753 1988 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
1754 1989 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
1755 1990 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
1756 1991 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
1757 1992 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
1758 1993 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
1759 1994 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
1760 1995 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
1761 1996 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
1762 1997 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
1763 1998 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
1764 1999 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
1765 2000 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
1766 2001 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
1814 2049 4.180817 GGTAGTAAATGCATTTTGGTGGC 58.819 43.478 28.45 14.12 0.00 5.01
1815 2050 4.322349 GGTAGTAAATGCATTTTGGTGGCA 60.322 41.667 28.45 7.20 42.43 4.92
1816 2051 3.663025 AGTAAATGCATTTTGGTGGCAC 58.337 40.909 28.45 18.19 40.83 5.01
1817 2052 2.634815 AAATGCATTTTGGTGGCACA 57.365 40.000 18.99 2.61 40.83 4.57
1875 2111 1.273759 AAAAGTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
1876 2112 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
1877 2113 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1878 2114 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1879 2115 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1880 2116 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1881 2117 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1882 2118 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1883 2119 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1884 2120 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1885 2121 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1886 2122 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1887 2123 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1888 2124 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1889 2125 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1890 2126 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1891 2127 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1892 2128 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
1893 2129 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
1894 2130 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
1895 2131 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
1896 2132 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
1897 2133 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
1898 2134 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
1899 2135 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
1900 2136 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
1906 2142 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
1907 2143 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
1908 2144 9.310716 AGTGTCTCAACTTTGTACTAACTTTAC 57.689 33.333 0.00 0.00 0.00 2.01
1909 2145 9.310716 GTGTCTCAACTTTGTACTAACTTTACT 57.689 33.333 0.00 0.00 0.00 2.24
1910 2146 9.309516 TGTCTCAACTTTGTACTAACTTTACTG 57.690 33.333 0.00 0.00 0.00 2.74
1911 2147 8.274248 GTCTCAACTTTGTACTAACTTTACTGC 58.726 37.037 0.00 0.00 0.00 4.40
1912 2148 7.982919 TCTCAACTTTGTACTAACTTTACTGCA 59.017 33.333 0.00 0.00 0.00 4.41
1913 2149 8.495361 TCAACTTTGTACTAACTTTACTGCAA 57.505 30.769 0.00 0.00 0.00 4.08
1914 2150 8.948145 TCAACTTTGTACTAACTTTACTGCAAA 58.052 29.630 0.00 0.00 0.00 3.68
1915 2151 9.006215 CAACTTTGTACTAACTTTACTGCAAAC 57.994 33.333 0.00 0.00 0.00 2.93
1916 2152 8.502105 ACTTTGTACTAACTTTACTGCAAACT 57.498 30.769 0.00 0.00 0.00 2.66
1917 2153 8.395633 ACTTTGTACTAACTTTACTGCAAACTG 58.604 33.333 0.00 0.00 0.00 3.16
1918 2154 6.295039 TGTACTAACTTTACTGCAAACTGC 57.705 37.500 0.00 0.00 45.29 4.40
1932 2168 5.866503 GCAAACTGCAAAGTTGTACTAAC 57.133 39.130 0.00 0.00 44.26 2.34
1933 2169 4.738252 GCAAACTGCAAAGTTGTACTAACC 59.262 41.667 0.00 0.00 44.26 2.85
1934 2170 5.449999 GCAAACTGCAAAGTTGTACTAACCT 60.450 40.000 0.00 0.00 44.26 3.50
1935 2171 6.560711 CAAACTGCAAAGTTGTACTAACCTT 58.439 36.000 0.00 0.00 31.64 3.50
1936 2172 5.751243 ACTGCAAAGTTGTACTAACCTTG 57.249 39.130 11.81 11.81 0.00 3.61
1937 2173 5.433526 ACTGCAAAGTTGTACTAACCTTGA 58.566 37.500 16.80 7.17 0.00 3.02
1938 2174 5.527582 ACTGCAAAGTTGTACTAACCTTGAG 59.472 40.000 16.80 13.89 0.00 3.02
1939 2175 5.676552 TGCAAAGTTGTACTAACCTTGAGA 58.323 37.500 16.80 6.03 0.00 3.27
1940 2176 5.526111 TGCAAAGTTGTACTAACCTTGAGAC 59.474 40.000 16.80 6.37 0.00 3.36
1941 2177 5.526111 GCAAAGTTGTACTAACCTTGAGACA 59.474 40.000 16.80 0.00 0.00 3.41
1942 2178 6.511282 GCAAAGTTGTACTAACCTTGAGACAC 60.511 42.308 16.80 3.22 0.00 3.67
1943 2179 6.481434 AAGTTGTACTAACCTTGAGACACT 57.519 37.500 0.00 0.00 0.00 3.55
1944 2180 6.481434 AGTTGTACTAACCTTGAGACACTT 57.519 37.500 0.00 0.00 0.00 3.16
1945 2181 7.592885 AGTTGTACTAACCTTGAGACACTTA 57.407 36.000 0.00 0.00 0.00 2.24
1946 2182 8.191534 AGTTGTACTAACCTTGAGACACTTAT 57.808 34.615 0.00 0.00 0.00 1.73
1947 2183 8.648693 AGTTGTACTAACCTTGAGACACTTATT 58.351 33.333 0.00 0.00 0.00 1.40
1948 2184 9.269453 GTTGTACTAACCTTGAGACACTTATTT 57.731 33.333 0.00 0.00 0.00 1.40
1949 2185 9.841295 TTGTACTAACCTTGAGACACTTATTTT 57.159 29.630 0.00 0.00 0.00 1.82
1950 2186 9.268268 TGTACTAACCTTGAGACACTTATTTTG 57.732 33.333 0.00 0.00 0.00 2.44
1951 2187 7.745620 ACTAACCTTGAGACACTTATTTTGG 57.254 36.000 0.00 0.00 0.00 3.28
1952 2188 6.715264 ACTAACCTTGAGACACTTATTTTGGG 59.285 38.462 0.00 0.00 0.00 4.12
1953 2189 5.319043 ACCTTGAGACACTTATTTTGGGA 57.681 39.130 0.00 0.00 0.00 4.37
1954 2190 5.070685 ACCTTGAGACACTTATTTTGGGAC 58.929 41.667 0.00 0.00 0.00 4.46
1955 2191 4.154195 CCTTGAGACACTTATTTTGGGACG 59.846 45.833 0.00 0.00 0.00 4.79
1956 2192 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
1957 2193 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
1958 2194 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1959 2195 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1960 2196 2.374170 ACACTTATTTTGGGACGGAGGT 59.626 45.455 0.00 0.00 0.00 3.85
1961 2197 3.583966 ACACTTATTTTGGGACGGAGGTA 59.416 43.478 0.00 0.00 0.00 3.08
1962 2198 4.189231 CACTTATTTTGGGACGGAGGTAG 58.811 47.826 0.00 0.00 0.00 3.18
1971 2207 5.323382 TGGGACGGAGGTAGTACATTATA 57.677 43.478 2.06 0.00 0.00 0.98
1980 2216 6.437793 GGAGGTAGTACATTATATCCTGCAGT 59.562 42.308 13.81 0.00 33.35 4.40
2002 2238 0.809385 CAAGCCATGCTCTTCCACAG 59.191 55.000 0.00 0.00 38.25 3.66
2015 2251 1.668826 TCCACAGGATTAGCTTGGGT 58.331 50.000 0.00 0.00 0.00 4.51
2125 2363 3.058639 CAGCTTTCAGTTTCTACCAGTGC 60.059 47.826 0.00 0.00 0.00 4.40
2133 2371 2.018355 TTCTACCAGTGCAGTGGGTA 57.982 50.000 37.49 26.09 42.54 3.69
2177 2415 4.734108 GCCAAAATTGCAACAAAATGTGCT 60.734 37.500 0.00 0.00 0.00 4.40
2183 2421 7.493743 AATTGCAACAAAATGTGCTAATGAA 57.506 28.000 0.00 0.00 0.00 2.57
2192 2430 5.940192 AATGTGCTAATGAAAACACTCGA 57.060 34.783 0.00 0.00 34.14 4.04
2207 2445 3.006323 ACACTCGAGCTGAAGAGTTGAAT 59.994 43.478 13.61 0.00 44.46 2.57
2228 2466 2.382882 TCGAGATCAGATCAAGCAGGT 58.617 47.619 13.14 0.00 0.00 4.00
2239 2477 2.494059 TCAAGCAGGTGAACTTGTAGC 58.506 47.619 0.00 0.00 43.05 3.58
2255 2493 3.743521 TGTAGCAGCAGTTGAAGATGTT 58.256 40.909 0.00 0.00 0.00 2.71
2321 2559 5.114780 GGGATTCCTTTCGGTAAGTAACTC 58.885 45.833 2.01 0.00 31.56 3.01
2354 2592 5.759763 ACAAAGGCAAAATCCTGTCATTTTC 59.240 36.000 0.00 0.00 34.37 2.29
2356 2594 6.916360 AAGGCAAAATCCTGTCATTTTCTA 57.084 33.333 0.00 0.00 34.37 2.10
2387 2625 5.329035 AGCATGTGGGTGAATGTAAAATC 57.671 39.130 0.00 0.00 0.00 2.17
2407 2645 1.580845 CTGCCGCAGAAGTTTCCTGG 61.581 60.000 15.74 0.00 32.44 4.45
2412 2650 0.178990 GCAGAAGTTTCCTGGTGGGT 60.179 55.000 0.00 0.00 36.25 4.51
2413 2651 1.754201 GCAGAAGTTTCCTGGTGGGTT 60.754 52.381 0.00 0.00 36.25 4.11
2424 2662 2.158842 CCTGGTGGGTTTGATTTTGCAA 60.159 45.455 0.00 0.00 0.00 4.08
2436 2674 6.761731 TTGATTTTGCAAATACCAGTTTCG 57.238 33.333 13.65 0.00 0.00 3.46
2437 2675 4.683781 TGATTTTGCAAATACCAGTTTCGC 59.316 37.500 13.65 0.00 0.00 4.70
2438 2676 4.314740 TTTTGCAAATACCAGTTTCGCT 57.685 36.364 13.65 0.00 0.00 4.93
2453 2691 6.403309 CCAGTTTCGCTTTTAGGAGAATTACC 60.403 42.308 0.00 0.00 0.00 2.85
2459 2697 8.241497 TCGCTTTTAGGAGAATTACCAGTATA 57.759 34.615 4.35 0.00 0.00 1.47
2460 2698 8.139989 TCGCTTTTAGGAGAATTACCAGTATAC 58.860 37.037 0.00 0.00 0.00 1.47
2461 2699 7.924412 CGCTTTTAGGAGAATTACCAGTATACA 59.076 37.037 5.50 0.00 0.00 2.29
2505 2743 7.194607 TCTTCAGCTTGTTAATGAAAGTGAG 57.805 36.000 0.00 0.00 32.87 3.51
2506 2744 5.362556 TCAGCTTGTTAATGAAAGTGAGC 57.637 39.130 0.00 0.00 0.00 4.26
2507 2745 4.821260 TCAGCTTGTTAATGAAAGTGAGCA 59.179 37.500 0.00 0.00 0.00 4.26
2508 2746 5.049198 TCAGCTTGTTAATGAAAGTGAGCAG 60.049 40.000 0.00 0.00 0.00 4.24
2509 2747 4.823989 AGCTTGTTAATGAAAGTGAGCAGT 59.176 37.500 0.00 0.00 0.00 4.40
2510 2748 5.997746 AGCTTGTTAATGAAAGTGAGCAGTA 59.002 36.000 0.00 0.00 0.00 2.74
2567 2805 5.880332 TCTCACTGCATAATTACCCAAACTC 59.120 40.000 0.00 0.00 0.00 3.01
2572 2810 4.157656 TGCATAATTACCCAAACTCACTGC 59.842 41.667 0.00 0.00 0.00 4.40
2575 2813 6.263168 GCATAATTACCCAAACTCACTGCTAT 59.737 38.462 0.00 0.00 0.00 2.97
2592 2830 6.286758 ACTGCTATAGTGTTGATTGATCCTG 58.713 40.000 0.84 0.00 38.49 3.86
2606 2844 6.209986 TGATTGATCCTGCAAGTTTCAGAAAT 59.790 34.615 3.90 0.00 33.54 2.17
2610 2848 3.005050 TCCTGCAAGTTTCAGAAATGCTG 59.995 43.478 18.18 17.10 46.31 4.41
2625 2863 8.698210 TCAGAAATGCTGCAATTTTCCTTATAT 58.302 29.630 19.62 3.61 44.52 0.86
2630 2868 6.973843 TGCTGCAATTTTCCTTATATAGCAG 58.026 36.000 0.00 0.00 46.95 4.24
2706 2944 7.693969 ATCCTAAACCAGTTGAAAATGAGAG 57.306 36.000 0.00 0.00 0.00 3.20
2709 2947 5.520376 AAACCAGTTGAAAATGAGAGTGG 57.480 39.130 0.00 0.00 38.33 4.00
2780 3018 8.458843 CCTTATTTCATTAACGGTTTCATCAGT 58.541 33.333 0.00 0.00 0.00 3.41
2792 3030 5.163854 CGGTTTCATCAGTCTTGAATGGTAC 60.164 44.000 0.00 0.00 36.78 3.34
2795 3033 4.104086 TCATCAGTCTTGAATGGTACCCT 58.896 43.478 10.07 0.00 36.78 4.34
2801 3039 5.046591 CAGTCTTGAATGGTACCCTGTAGAA 60.047 44.000 10.07 0.00 0.00 2.10
2819 3057 7.189693 TGTAGAAAGTAGCACTGAAAACATG 57.810 36.000 0.00 0.00 0.00 3.21
2820 3058 6.989759 TGTAGAAAGTAGCACTGAAAACATGA 59.010 34.615 0.00 0.00 0.00 3.07
2823 3061 5.438761 AAGTAGCACTGAAAACATGAACC 57.561 39.130 0.00 0.00 0.00 3.62
2829 3067 4.610945 CACTGAAAACATGAACCCTGTTC 58.389 43.478 0.00 0.07 35.84 3.18
2846 3084 0.250252 TTCGCTTGGATGTGTCTGCA 60.250 50.000 0.00 0.00 0.00 4.41
2847 3085 0.036105 TCGCTTGGATGTGTCTGCAT 60.036 50.000 0.00 0.00 0.00 3.96
3170 3408 4.521146 CTGTCCTTGCATGGAAGTATTCT 58.479 43.478 21.99 0.00 46.56 2.40
3205 3443 1.063031 GTAACTACCGTGCACGTTCC 58.937 55.000 34.81 12.36 37.74 3.62
3206 3444 0.672889 TAACTACCGTGCACGTTCCA 59.327 50.000 34.81 16.98 37.74 3.53
3210 3448 0.869068 TACCGTGCACGTTCCATTTG 59.131 50.000 34.81 20.34 37.74 2.32
3613 3851 1.079503 CTAGTCTTGGGTTCGCTTGC 58.920 55.000 0.00 0.00 0.00 4.01
3754 3992 3.305813 CCAGTTACCTCTTGACGCACTTA 60.306 47.826 0.00 0.00 0.00 2.24
3818 4056 7.326305 CACTGAACATATAGCCTTGATACGTAC 59.674 40.741 0.00 0.00 0.00 3.67
3935 4173 2.681344 GTGAAACAACAGTTCGGGAGTT 59.319 45.455 0.00 0.00 36.32 3.01
3957 4195 2.609002 GAGTTTTAACGGGAACACACGT 59.391 45.455 0.00 0.00 46.48 4.49
4012 4258 2.292569 CGAGATTTCATTCCATGGCCAG 59.707 50.000 13.05 3.10 0.00 4.85
4014 4260 4.150359 GAGATTTCATTCCATGGCCAGAT 58.850 43.478 13.05 0.00 0.00 2.90
4039 4285 9.632638 ATGGTTACAATCTGCTAATACAAGATT 57.367 29.630 0.00 0.00 0.00 2.40
4040 4286 8.892723 TGGTTACAATCTGCTAATACAAGATTG 58.107 33.333 18.37 18.37 46.45 2.67
4047 4293 8.969260 ATCTGCTAATACAAGATTGTGAATGA 57.031 30.769 8.46 0.00 42.31 2.57
4059 4305 2.607499 TGTGAATGAAATGGTGGCCTT 58.393 42.857 3.32 0.00 0.00 4.35
4075 4321 1.618343 GCCTTATTGCAACCAACAGGT 59.382 47.619 0.00 0.00 37.20 4.00
4088 4334 3.532896 ACAGGTGGTGTTATGAGCG 57.467 52.632 0.00 0.00 34.94 5.03
4122 4369 1.523758 AGCGAGACAATGTGAAACCC 58.476 50.000 0.00 0.00 34.36 4.11
4147 4394 7.566879 CCTATTATGGGACCTAGCTATCTCAAT 59.433 40.741 1.08 0.00 0.00 2.57
4190 4437 9.973661 TCTACCATTTGATTCTTGATTTCCTTA 57.026 29.630 0.00 0.00 0.00 2.69
4193 4440 8.869109 ACCATTTGATTCTTGATTTCCTTAACA 58.131 29.630 0.00 0.00 0.00 2.41
4227 4474 0.968405 TGATTTGGCAAGGGAAGCAC 59.032 50.000 0.00 0.00 0.00 4.40
4228 4475 1.260544 GATTTGGCAAGGGAAGCACT 58.739 50.000 0.00 0.00 0.00 4.40
4235 4482 2.436417 GCAAGGGAAGCACTGACATAA 58.564 47.619 0.00 0.00 0.00 1.90
4237 4484 3.255642 GCAAGGGAAGCACTGACATAAAA 59.744 43.478 0.00 0.00 0.00 1.52
4238 4485 4.616835 GCAAGGGAAGCACTGACATAAAAG 60.617 45.833 0.00 0.00 0.00 2.27
4252 4499 8.359642 ACTGACATAAAAGAGAGAGCTATCATC 58.640 37.037 11.60 5.50 0.00 2.92
4295 4544 2.050918 AGGCTAGACTATTGAAGGGCC 58.949 52.381 0.00 0.00 38.71 5.80
4298 4547 2.436173 GCTAGACTATTGAAGGGCCAGT 59.564 50.000 6.18 0.00 0.00 4.00
4327 4576 9.841880 CATTCCTATCATTATTGCTTGAATCTG 57.158 33.333 0.00 0.00 0.00 2.90
4365 4614 3.354948 TGCAATAGAACATCAGCTGGT 57.645 42.857 15.13 2.68 0.00 4.00
4377 4626 4.157289 ACATCAGCTGGTATGAAGCAAAAG 59.843 41.667 19.28 0.00 43.37 2.27
4381 4630 5.181245 TCAGCTGGTATGAAGCAAAAGTAAC 59.819 40.000 15.13 0.00 43.37 2.50
4387 4636 5.472137 GGTATGAAGCAAAAGTAACCTCACA 59.528 40.000 0.00 0.00 0.00 3.58
4388 4637 6.016610 GGTATGAAGCAAAAGTAACCTCACAA 60.017 38.462 0.00 0.00 0.00 3.33
4389 4638 6.655078 ATGAAGCAAAAGTAACCTCACAAT 57.345 33.333 0.00 0.00 0.00 2.71
4390 4639 6.463995 TGAAGCAAAAGTAACCTCACAATT 57.536 33.333 0.00 0.00 0.00 2.32
4406 4655 6.239120 CCTCACAATTGTTGTTCCTCAAGATT 60.239 38.462 8.77 0.00 43.23 2.40
4417 4666 1.071385 CCTCAAGATTATGCCCGCTCT 59.929 52.381 0.00 0.00 0.00 4.09
4425 4674 0.181114 TATGCCCGCTCTTGCTGATT 59.819 50.000 0.00 0.00 36.97 2.57
4432 4681 2.286872 CGCTCTTGCTGATTCATCCTT 58.713 47.619 0.00 0.00 36.97 3.36
4452 4701 0.613260 TGAGGACAAAGACCCATCCG 59.387 55.000 0.00 0.00 36.28 4.18
4454 4703 1.201429 AGGACAAAGACCCATCCGCT 61.201 55.000 0.00 0.00 36.28 5.52
4462 4711 2.398588 AGACCCATCCGCTGATAAAGA 58.601 47.619 0.00 0.00 0.00 2.52
4463 4712 2.771943 AGACCCATCCGCTGATAAAGAA 59.228 45.455 0.00 0.00 0.00 2.52
4474 4723 4.105486 GCTGATAAAGAAAACCAATCCGC 58.895 43.478 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.917760 GTCATCGCCCCTCCCTCG 61.918 72.222 0.00 0.00 0.00 4.63
11 12 2.764128 TGTCATCGCCCCTCCCTC 60.764 66.667 0.00 0.00 0.00 4.30
12 13 2.765807 CTGTCATCGCCCCTCCCT 60.766 66.667 0.00 0.00 0.00 4.20
13 14 4.554036 GCTGTCATCGCCCCTCCC 62.554 72.222 0.00 0.00 0.00 4.30
14 15 4.899239 CGCTGTCATCGCCCCTCC 62.899 72.222 0.00 0.00 0.00 4.30
15 16 4.899239 CCGCTGTCATCGCCCCTC 62.899 72.222 0.00 0.00 0.00 4.30
23 24 4.704833 AAGGTGCGCCGCTGTCAT 62.705 61.111 11.67 0.00 40.50 3.06
38 39 0.459237 ATCACTGAAGCGAGCCGAAG 60.459 55.000 0.00 0.00 0.00 3.79
39 40 0.037326 AATCACTGAAGCGAGCCGAA 60.037 50.000 0.00 0.00 0.00 4.30
40 41 0.737367 CAATCACTGAAGCGAGCCGA 60.737 55.000 0.00 0.00 0.00 5.54
41 42 1.016130 ACAATCACTGAAGCGAGCCG 61.016 55.000 0.00 0.00 0.00 5.52
42 43 1.929836 CTACAATCACTGAAGCGAGCC 59.070 52.381 0.00 0.00 0.00 4.70
43 44 2.611518 ACTACAATCACTGAAGCGAGC 58.388 47.619 0.00 0.00 0.00 5.03
44 45 3.990469 ACAACTACAATCACTGAAGCGAG 59.010 43.478 0.00 0.00 0.00 5.03
45 46 3.987868 GACAACTACAATCACTGAAGCGA 59.012 43.478 0.00 0.00 0.00 4.93
46 47 3.740832 TGACAACTACAATCACTGAAGCG 59.259 43.478 0.00 0.00 0.00 4.68
47 48 5.023551 GTGACAACTACAATCACTGAAGC 57.976 43.478 0.00 0.00 39.72 3.86
53 54 4.929808 CCACCTAGTGACAACTACAATCAC 59.070 45.833 0.00 0.00 42.54 3.06
54 55 4.591498 ACCACCTAGTGACAACTACAATCA 59.409 41.667 0.00 0.00 37.88 2.57
55 56 5.047235 AGACCACCTAGTGACAACTACAATC 60.047 44.000 0.00 0.00 37.88 2.67
56 57 4.838986 AGACCACCTAGTGACAACTACAAT 59.161 41.667 0.00 0.00 37.88 2.71
57 58 4.220724 AGACCACCTAGTGACAACTACAA 58.779 43.478 0.00 0.00 37.88 2.41
58 59 3.840991 AGACCACCTAGTGACAACTACA 58.159 45.455 0.00 0.00 37.88 2.74
59 60 4.142730 CGTAGACCACCTAGTGACAACTAC 60.143 50.000 0.00 0.00 37.88 2.73
60 61 4.005650 CGTAGACCACCTAGTGACAACTA 58.994 47.826 0.00 0.00 37.88 2.24
61 62 2.818432 CGTAGACCACCTAGTGACAACT 59.182 50.000 0.00 0.00 40.67 3.16
62 63 2.094854 CCGTAGACCACCTAGTGACAAC 60.095 54.545 0.00 0.00 35.23 3.32
63 64 2.165167 CCGTAGACCACCTAGTGACAA 58.835 52.381 0.00 0.00 35.23 3.18
64 65 1.352017 TCCGTAGACCACCTAGTGACA 59.648 52.381 0.00 0.00 35.23 3.58
65 66 2.119801 TCCGTAGACCACCTAGTGAC 57.880 55.000 0.00 0.00 35.23 3.67
66 67 3.377253 AATCCGTAGACCACCTAGTGA 57.623 47.619 0.00 0.00 35.23 3.41
67 68 3.430374 CCAAATCCGTAGACCACCTAGTG 60.430 52.174 0.00 0.00 0.00 2.74
68 69 2.764572 CCAAATCCGTAGACCACCTAGT 59.235 50.000 0.00 0.00 0.00 2.57
69 70 3.028850 TCCAAATCCGTAGACCACCTAG 58.971 50.000 0.00 0.00 0.00 3.02
70 71 3.104519 TCCAAATCCGTAGACCACCTA 57.895 47.619 0.00 0.00 0.00 3.08
71 72 1.946984 TCCAAATCCGTAGACCACCT 58.053 50.000 0.00 0.00 0.00 4.00
72 73 2.093128 ACATCCAAATCCGTAGACCACC 60.093 50.000 0.00 0.00 0.00 4.61
73 74 3.261981 ACATCCAAATCCGTAGACCAC 57.738 47.619 0.00 0.00 0.00 4.16
74 75 5.623956 ATTACATCCAAATCCGTAGACCA 57.376 39.130 0.00 0.00 0.00 4.02
75 76 6.937436 AAATTACATCCAAATCCGTAGACC 57.063 37.500 0.00 0.00 0.00 3.85
104 105 9.302345 CATGATAGTACAACGAACACTAGAAAT 57.698 33.333 0.00 0.00 0.00 2.17
105 106 8.517056 TCATGATAGTACAACGAACACTAGAAA 58.483 33.333 0.00 0.00 0.00 2.52
106 107 8.047413 TCATGATAGTACAACGAACACTAGAA 57.953 34.615 0.00 0.00 0.00 2.10
107 108 7.619964 TCATGATAGTACAACGAACACTAGA 57.380 36.000 0.00 0.00 0.00 2.43
108 109 8.858003 AATCATGATAGTACAACGAACACTAG 57.142 34.615 9.04 0.00 0.00 2.57
109 110 8.463607 TGAATCATGATAGTACAACGAACACTA 58.536 33.333 9.04 0.00 0.00 2.74
110 111 7.320399 TGAATCATGATAGTACAACGAACACT 58.680 34.615 9.04 0.00 0.00 3.55
111 112 7.520119 TGAATCATGATAGTACAACGAACAC 57.480 36.000 9.04 0.00 0.00 3.32
112 113 8.032451 TCTTGAATCATGATAGTACAACGAACA 58.968 33.333 9.04 0.00 0.00 3.18
113 114 8.407457 TCTTGAATCATGATAGTACAACGAAC 57.593 34.615 9.04 0.00 0.00 3.95
114 115 8.996024 TTCTTGAATCATGATAGTACAACGAA 57.004 30.769 9.04 13.47 0.00 3.85
115 116 8.466798 TCTTCTTGAATCATGATAGTACAACGA 58.533 33.333 9.04 9.50 0.00 3.85
116 117 8.634475 TCTTCTTGAATCATGATAGTACAACG 57.366 34.615 9.04 7.80 0.00 4.10
126 127 9.910267 TTCCAATCTATTCTTCTTGAATCATGA 57.090 29.630 0.00 0.00 43.69 3.07
128 129 9.917887 ACTTCCAATCTATTCTTCTTGAATCAT 57.082 29.630 0.00 0.00 43.69 2.45
129 130 9.745018 AACTTCCAATCTATTCTTCTTGAATCA 57.255 29.630 0.00 0.00 43.69 2.57
134 135 9.631452 GGAAAAACTTCCAATCTATTCTTCTTG 57.369 33.333 0.00 0.00 40.79 3.02
135 136 8.515414 CGGAAAAACTTCCAATCTATTCTTCTT 58.485 33.333 4.85 0.00 41.16 2.52
136 137 7.121315 CCGGAAAAACTTCCAATCTATTCTTCT 59.879 37.037 0.00 0.00 41.16 2.85
137 138 7.094334 ACCGGAAAAACTTCCAATCTATTCTTC 60.094 37.037 9.46 0.00 41.16 2.87
138 139 6.719829 ACCGGAAAAACTTCCAATCTATTCTT 59.280 34.615 9.46 0.00 41.16 2.52
139 140 6.246163 ACCGGAAAAACTTCCAATCTATTCT 58.754 36.000 9.46 0.00 41.16 2.40
140 141 6.510879 ACCGGAAAAACTTCCAATCTATTC 57.489 37.500 9.46 0.00 41.16 1.75
141 142 8.411991 TTTACCGGAAAAACTTCCAATCTATT 57.588 30.769 9.46 0.00 41.16 1.73
142 143 8.411991 TTTTACCGGAAAAACTTCCAATCTAT 57.588 30.769 9.46 0.00 41.16 1.98
143 144 7.820578 TTTTACCGGAAAAACTTCCAATCTA 57.179 32.000 9.46 0.00 41.16 1.98
144 145 6.718522 TTTTACCGGAAAAACTTCCAATCT 57.281 33.333 9.46 0.00 41.16 2.40
168 169 3.464111 TCCTCCTCGACGTTTCTTTTT 57.536 42.857 0.00 0.00 0.00 1.94
169 170 3.464111 TTCCTCCTCGACGTTTCTTTT 57.536 42.857 0.00 0.00 0.00 2.27
170 171 3.069158 TCTTTCCTCCTCGACGTTTCTTT 59.931 43.478 0.00 0.00 0.00 2.52
171 172 2.626743 TCTTTCCTCCTCGACGTTTCTT 59.373 45.455 0.00 0.00 0.00 2.52
172 173 2.236766 TCTTTCCTCCTCGACGTTTCT 58.763 47.619 0.00 0.00 0.00 2.52
205 206 1.227823 ACGCTTGCTACCTTGCACA 60.228 52.632 0.00 0.00 43.20 4.57
219 226 2.357517 CGTCTTCTTGGCCACGCT 60.358 61.111 3.88 0.00 0.00 5.07
227 234 1.205893 CCCTTCTCTCCCGTCTTCTTG 59.794 57.143 0.00 0.00 0.00 3.02
253 260 2.490115 TGCGACTCTTCTTCCTTCTCTC 59.510 50.000 0.00 0.00 0.00 3.20
290 298 5.957842 TTTATCCAAGGAATGTGTCACAC 57.042 39.130 8.08 0.00 34.56 3.82
295 303 7.315066 ACCAAAATTTATCCAAGGAATGTGT 57.685 32.000 0.00 0.00 0.00 3.72
338 346 4.077108 GTCATCCCGAGGGTTAAAAAGTT 58.923 43.478 8.20 0.00 36.47 2.66
456 466 0.410270 AGAGACGAGGAAGGAGGGTT 59.590 55.000 0.00 0.00 0.00 4.11
511 521 1.935327 GACTTGGACCGAGGTCGAGG 61.935 65.000 20.64 17.44 45.41 4.63
592 602 4.963373 TCAACCAATCAAGGAACTCGTTA 58.037 39.130 0.00 0.00 38.49 3.18
624 634 4.081586 ACGAGTTTCTCATCTAGGGTTTCC 60.082 45.833 0.00 0.00 0.00 3.13
757 778 5.629435 CGCGTATATGCTCACTTTCTCATAA 59.371 40.000 14.81 0.00 0.00 1.90
813 878 4.895297 CCCTTTTCCACAAGCATATATGGT 59.105 41.667 11.64 11.64 40.78 3.55
846 911 2.859971 TAACCCACCCCACCCCAC 60.860 66.667 0.00 0.00 0.00 4.61
847 912 2.440196 ATCTAACCCACCCCACCCCA 62.440 60.000 0.00 0.00 0.00 4.96
849 914 0.708209 AAATCTAACCCACCCCACCC 59.292 55.000 0.00 0.00 0.00 4.61
850 915 3.010920 ACTTAAATCTAACCCACCCCACC 59.989 47.826 0.00 0.00 0.00 4.61
851 916 4.014406 CACTTAAATCTAACCCACCCCAC 58.986 47.826 0.00 0.00 0.00 4.61
852 917 3.917629 TCACTTAAATCTAACCCACCCCA 59.082 43.478 0.00 0.00 0.00 4.96
853 918 4.018688 ACTCACTTAAATCTAACCCACCCC 60.019 45.833 0.00 0.00 0.00 4.95
854 919 5.175388 ACTCACTTAAATCTAACCCACCC 57.825 43.478 0.00 0.00 0.00 4.61
855 920 6.944096 AGTACTCACTTAAATCTAACCCACC 58.056 40.000 0.00 0.00 0.00 4.61
856 921 8.092687 TGAAGTACTCACTTAAATCTAACCCAC 58.907 37.037 0.00 0.00 45.18 4.61
857 922 8.197592 TGAAGTACTCACTTAAATCTAACCCA 57.802 34.615 0.00 0.00 45.18 4.51
875 940 7.688167 CGACATGTGTGATACAAAATGAAGTAC 59.312 37.037 1.15 0.00 43.77 2.73
891 968 2.099141 ATGAGTTCCCGACATGTGTG 57.901 50.000 1.15 0.00 0.00 3.82
901 978 2.170166 TGTGCCAATCAATGAGTTCCC 58.830 47.619 0.00 0.00 0.00 3.97
937 1014 3.587933 GGTGTGCCGCCGTTTCAA 61.588 61.111 0.00 0.00 0.00 2.69
939 1016 2.414840 AATTGGTGTGCCGCCGTTTC 62.415 55.000 1.14 0.00 36.72 2.78
940 1017 2.022240 AAATTGGTGTGCCGCCGTTT 62.022 50.000 1.14 2.60 36.72 3.60
941 1018 2.494530 AAATTGGTGTGCCGCCGTT 61.495 52.632 1.14 0.00 36.72 4.44
942 1019 2.909965 AAATTGGTGTGCCGCCGT 60.910 55.556 1.14 0.00 36.72 5.68
943 1020 2.430582 CAAATTGGTGTGCCGCCG 60.431 61.111 1.14 0.00 36.72 6.46
944 1021 2.048316 CCAAATTGGTGTGCCGCC 60.048 61.111 3.34 0.00 37.67 6.13
945 1022 2.738139 GCCAAATTGGTGTGCCGC 60.738 61.111 14.17 0.00 40.46 6.53
946 1023 2.048316 GGCCAAATTGGTGTGCCG 60.048 61.111 14.17 0.00 40.46 5.69
1003 1080 5.449304 CGATGGTGAAACAGGACTTTTTAC 58.551 41.667 0.00 0.00 39.98 2.01
1023 1100 3.846180 GCCATGTGGGATTGCGAT 58.154 55.556 0.54 0.00 40.01 4.58
1074 1151 3.842923 CCATGCCTCCGAGCGACT 61.843 66.667 0.00 0.00 34.65 4.18
1140 1217 5.105228 TCAGGGTAATACCTTTAGTGAACCG 60.105 44.000 9.58 0.00 39.34 4.44
1277 1354 7.732025 TCTAGTGGTCAATTGTCAAGAACTTA 58.268 34.615 5.13 0.00 0.00 2.24
1363 1442 4.466567 TTGTCAAGTGCACATAAACTCG 57.533 40.909 21.04 0.00 0.00 4.18
1419 1576 3.264193 TGATCAAACTACCAGATGCCTGT 59.736 43.478 0.00 0.00 38.74 4.00
1422 1579 4.883585 TCAATGATCAAACTACCAGATGCC 59.116 41.667 0.00 0.00 0.00 4.40
1431 1588 4.094739 CACGCACCATCAATGATCAAACTA 59.905 41.667 0.00 0.00 0.00 2.24
1433 1590 3.173599 CACGCACCATCAATGATCAAAC 58.826 45.455 0.00 0.00 0.00 2.93
1451 1608 1.493772 TTCCTTAGACAACGTGCACG 58.506 50.000 35.99 35.99 46.33 5.34
1476 1634 5.166398 CCATTTTCTTGCCTCTTTGTGATC 58.834 41.667 0.00 0.00 0.00 2.92
1490 1648 4.282703 AGCAGATTCAGCAACCATTTTCTT 59.717 37.500 3.76 0.00 0.00 2.52
1503 1675 7.149569 TCCAAATTTCTACAAGCAGATTCAG 57.850 36.000 0.00 0.00 0.00 3.02
1563 1735 4.154918 GGTCCATGCTAGAAGAACAAACTG 59.845 45.833 0.00 0.00 0.00 3.16
1567 1739 4.365514 TTGGTCCATGCTAGAAGAACAA 57.634 40.909 0.00 0.00 33.69 2.83
1569 1741 8.854614 ATATATTTGGTCCATGCTAGAAGAAC 57.145 34.615 0.00 0.00 0.00 3.01
1573 1745 8.664992 TGGTTATATATTTGGTCCATGCTAGAA 58.335 33.333 0.00 0.00 0.00 2.10
1597 1830 2.358957 TCGGAAAGCTTGATCATGTGG 58.641 47.619 0.00 0.00 0.00 4.17
1612 1845 6.730960 AACGCTTGACTATAAAAATCGGAA 57.269 33.333 0.00 0.00 0.00 4.30
1627 1860 3.501828 ACATGCACTGATTAAACGCTTGA 59.498 39.130 0.00 0.00 33.42 3.02
1628 1861 3.825308 ACATGCACTGATTAAACGCTTG 58.175 40.909 0.00 0.00 34.82 4.01
1629 1862 5.818136 ATACATGCACTGATTAAACGCTT 57.182 34.783 0.00 0.00 0.00 4.68
1630 1863 5.818136 AATACATGCACTGATTAAACGCT 57.182 34.783 0.00 0.00 0.00 5.07
1631 1864 6.195244 CAGAAATACATGCACTGATTAAACGC 59.805 38.462 0.00 0.00 0.00 4.84
1632 1865 6.195244 GCAGAAATACATGCACTGATTAAACG 59.805 38.462 2.66 0.00 42.11 3.60
1675 1910 3.840666 ACCAGCTAAGGTTCTCATCTCAA 59.159 43.478 0.00 0.00 39.34 3.02
1690 1925 6.952773 ACAACAGAACAATTAAACCAGCTA 57.047 33.333 0.00 0.00 0.00 3.32
1715 1950 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
1717 1952 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1718 1953 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1719 1954 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
1721 1956 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
1722 1957 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1724 1959 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
1726 1961 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
1727 1962 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
1729 1964 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
1731 1966 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
1734 1969 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
1735 1970 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
1736 1971 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
1738 1973 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
1740 1975 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
1768 2003 9.547279 ACCAATGGTGATATGTATCTAGATGTA 57.453 33.333 15.79 4.44 32.98 2.29
1769 2004 8.441311 ACCAATGGTGATATGTATCTAGATGT 57.559 34.615 15.79 4.15 32.98 3.06
1771 2006 9.775539 ACTACCAATGGTGATATGTATCTAGAT 57.224 33.333 16.41 10.73 36.19 1.98
1777 2012 9.231297 GCATTTACTACCAATGGTGATATGTAT 57.769 33.333 16.41 0.00 36.19 2.29
1778 2013 8.214364 TGCATTTACTACCAATGGTGATATGTA 58.786 33.333 16.41 8.08 36.19 2.29
1814 2049 4.921515 CCAAAATGCATCTCAAGACTTGTG 59.078 41.667 14.75 12.47 0.00 3.33
1815 2050 4.586001 ACCAAAATGCATCTCAAGACTTGT 59.414 37.500 14.75 0.00 0.00 3.16
1816 2051 4.921515 CACCAAAATGCATCTCAAGACTTG 59.078 41.667 9.03 9.03 0.00 3.16
1817 2052 4.586001 ACACCAAAATGCATCTCAAGACTT 59.414 37.500 0.00 0.00 0.00 3.01
1859 2095 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
1860 2096 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1861 2097 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1862 2098 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1863 2099 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1864 2100 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1865 2101 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1866 2102 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1867 2103 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1868 2104 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
1869 2105 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
1870 2106 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
1871 2107 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
1872 2108 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
1873 2109 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
1874 2110 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
1880 2116 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
1881 2117 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
1882 2118 9.310716 GTAAAGTTAGTACAAAGTTGAGACACT 57.689 33.333 0.00 0.00 0.00 3.55
1883 2119 9.310716 AGTAAAGTTAGTACAAAGTTGAGACAC 57.689 33.333 0.00 0.00 0.00 3.67
1884 2120 9.309516 CAGTAAAGTTAGTACAAAGTTGAGACA 57.690 33.333 0.00 0.00 0.00 3.41
1885 2121 8.274248 GCAGTAAAGTTAGTACAAAGTTGAGAC 58.726 37.037 0.00 0.00 0.00 3.36
1886 2122 7.982919 TGCAGTAAAGTTAGTACAAAGTTGAGA 59.017 33.333 0.00 0.00 0.00 3.27
1887 2123 8.138365 TGCAGTAAAGTTAGTACAAAGTTGAG 57.862 34.615 0.00 0.00 0.00 3.02
1888 2124 8.495361 TTGCAGTAAAGTTAGTACAAAGTTGA 57.505 30.769 0.00 0.00 0.00 3.18
1889 2125 9.006215 GTTTGCAGTAAAGTTAGTACAAAGTTG 57.994 33.333 5.05 0.00 32.73 3.16
1890 2126 8.953313 AGTTTGCAGTAAAGTTAGTACAAAGTT 58.047 29.630 5.05 0.00 32.79 2.66
1891 2127 8.395633 CAGTTTGCAGTAAAGTTAGTACAAAGT 58.604 33.333 5.05 5.69 35.15 2.66
1892 2128 7.376072 GCAGTTTGCAGTAAAGTTAGTACAAAG 59.624 37.037 5.05 0.00 44.26 2.77
1893 2129 7.190871 GCAGTTTGCAGTAAAGTTAGTACAAA 58.809 34.615 0.00 1.71 44.26 2.83
1894 2130 6.721321 GCAGTTTGCAGTAAAGTTAGTACAA 58.279 36.000 0.00 0.00 44.26 2.41
1895 2131 6.295039 GCAGTTTGCAGTAAAGTTAGTACA 57.705 37.500 0.00 0.00 44.26 2.90
1910 2146 4.738252 GGTTAGTACAACTTTGCAGTTTGC 59.262 41.667 0.00 0.00 40.66 3.68
1911 2147 6.131544 AGGTTAGTACAACTTTGCAGTTTG 57.868 37.500 0.00 3.24 40.66 2.93
1912 2148 6.376018 TCAAGGTTAGTACAACTTTGCAGTTT 59.624 34.615 19.04 0.00 40.66 2.66
1913 2149 5.883673 TCAAGGTTAGTACAACTTTGCAGTT 59.116 36.000 19.04 0.00 44.72 3.16
1914 2150 5.433526 TCAAGGTTAGTACAACTTTGCAGT 58.566 37.500 19.04 0.00 37.22 4.40
1915 2151 5.758296 TCTCAAGGTTAGTACAACTTTGCAG 59.242 40.000 19.04 17.06 37.22 4.41
1916 2152 5.526111 GTCTCAAGGTTAGTACAACTTTGCA 59.474 40.000 19.04 10.97 37.22 4.08
1917 2153 5.526111 TGTCTCAAGGTTAGTACAACTTTGC 59.474 40.000 19.04 11.42 37.22 3.68
1918 2154 6.761714 AGTGTCTCAAGGTTAGTACAACTTTG 59.238 38.462 18.34 18.34 38.21 2.77
1919 2155 6.885922 AGTGTCTCAAGGTTAGTACAACTTT 58.114 36.000 0.00 0.00 0.00 2.66
1920 2156 6.481434 AGTGTCTCAAGGTTAGTACAACTT 57.519 37.500 0.00 0.00 0.00 2.66
1921 2157 6.481434 AAGTGTCTCAAGGTTAGTACAACT 57.519 37.500 0.00 0.00 0.00 3.16
1922 2158 8.828688 AATAAGTGTCTCAAGGTTAGTACAAC 57.171 34.615 0.00 0.00 0.00 3.32
1923 2159 9.841295 AAAATAAGTGTCTCAAGGTTAGTACAA 57.159 29.630 0.00 0.00 0.00 2.41
1924 2160 9.268268 CAAAATAAGTGTCTCAAGGTTAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
1925 2161 8.718734 CCAAAATAAGTGTCTCAAGGTTAGTAC 58.281 37.037 0.00 0.00 0.00 2.73
1926 2162 7.881232 CCCAAAATAAGTGTCTCAAGGTTAGTA 59.119 37.037 0.00 0.00 0.00 1.82
1927 2163 6.715264 CCCAAAATAAGTGTCTCAAGGTTAGT 59.285 38.462 0.00 0.00 0.00 2.24
1928 2164 6.940298 TCCCAAAATAAGTGTCTCAAGGTTAG 59.060 38.462 0.00 0.00 0.00 2.34
1929 2165 6.713450 GTCCCAAAATAAGTGTCTCAAGGTTA 59.287 38.462 0.00 0.00 0.00 2.85
1930 2166 5.535030 GTCCCAAAATAAGTGTCTCAAGGTT 59.465 40.000 0.00 0.00 0.00 3.50
1931 2167 5.070685 GTCCCAAAATAAGTGTCTCAAGGT 58.929 41.667 0.00 0.00 0.00 3.50
1932 2168 4.154195 CGTCCCAAAATAAGTGTCTCAAGG 59.846 45.833 0.00 0.00 0.00 3.61
1933 2169 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
1934 2170 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1935 2171 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1936 2172 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1937 2173 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1938 2174 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1939 2175 2.374170 ACCTCCGTCCCAAAATAAGTGT 59.626 45.455 0.00 0.00 0.00 3.55
1940 2176 3.067684 ACCTCCGTCCCAAAATAAGTG 57.932 47.619 0.00 0.00 0.00 3.16
1941 2177 3.842436 ACTACCTCCGTCCCAAAATAAGT 59.158 43.478 0.00 0.00 0.00 2.24
1942 2178 4.482952 ACTACCTCCGTCCCAAAATAAG 57.517 45.455 0.00 0.00 0.00 1.73
1943 2179 4.776837 TGTACTACCTCCGTCCCAAAATAA 59.223 41.667 0.00 0.00 0.00 1.40
1944 2180 4.352009 TGTACTACCTCCGTCCCAAAATA 58.648 43.478 0.00 0.00 0.00 1.40
1945 2181 3.175594 TGTACTACCTCCGTCCCAAAAT 58.824 45.455 0.00 0.00 0.00 1.82
1946 2182 2.607499 TGTACTACCTCCGTCCCAAAA 58.393 47.619 0.00 0.00 0.00 2.44
1947 2183 2.307496 TGTACTACCTCCGTCCCAAA 57.693 50.000 0.00 0.00 0.00 3.28
1948 2184 2.537633 ATGTACTACCTCCGTCCCAA 57.462 50.000 0.00 0.00 0.00 4.12
1949 2185 2.537633 AATGTACTACCTCCGTCCCA 57.462 50.000 0.00 0.00 0.00 4.37
1950 2186 5.359292 GGATATAATGTACTACCTCCGTCCC 59.641 48.000 0.00 0.00 0.00 4.46
1951 2187 6.095160 CAGGATATAATGTACTACCTCCGTCC 59.905 46.154 0.00 0.00 0.00 4.79
1952 2188 6.404513 GCAGGATATAATGTACTACCTCCGTC 60.405 46.154 0.00 0.00 0.00 4.79
1953 2189 5.418209 GCAGGATATAATGTACTACCTCCGT 59.582 44.000 0.00 0.00 0.00 4.69
1954 2190 5.417894 TGCAGGATATAATGTACTACCTCCG 59.582 44.000 0.00 0.00 0.00 4.63
1955 2191 6.437793 ACTGCAGGATATAATGTACTACCTCC 59.562 42.308 19.93 0.00 0.00 4.30
1956 2192 7.469537 ACTGCAGGATATAATGTACTACCTC 57.530 40.000 19.93 0.00 0.00 3.85
1957 2193 9.191479 GATACTGCAGGATATAATGTACTACCT 57.809 37.037 19.93 0.00 0.00 3.08
1958 2194 8.967918 TGATACTGCAGGATATAATGTACTACC 58.032 37.037 19.93 0.00 0.00 3.18
1961 2197 8.037758 GCTTGATACTGCAGGATATAATGTACT 58.962 37.037 19.93 0.00 0.00 2.73
1962 2198 7.278868 GGCTTGATACTGCAGGATATAATGTAC 59.721 40.741 19.93 0.53 0.00 2.90
1971 2207 2.860009 CATGGCTTGATACTGCAGGAT 58.140 47.619 12.48 12.48 0.00 3.24
1980 2216 2.239402 TGTGGAAGAGCATGGCTTGATA 59.761 45.455 4.32 0.00 39.88 2.15
2002 2238 5.876357 TGGTCATTATACCCAAGCTAATCC 58.124 41.667 0.00 0.00 38.90 3.01
2125 2363 2.094675 CAAATGGCTTCCTACCCACTG 58.905 52.381 0.00 0.00 33.17 3.66
2133 2371 2.104622 CACCAAAACCAAATGGCTTCCT 59.895 45.455 0.00 0.00 40.51 3.36
2177 2415 5.538118 TCTTCAGCTCGAGTGTTTTCATTA 58.462 37.500 15.13 0.00 0.00 1.90
2183 2421 3.126831 CAACTCTTCAGCTCGAGTGTTT 58.873 45.455 15.13 0.00 40.18 2.83
2192 2430 4.527509 TCTCGAATTCAACTCTTCAGCT 57.472 40.909 6.22 0.00 0.00 4.24
2207 2445 2.762887 ACCTGCTTGATCTGATCTCGAA 59.237 45.455 17.82 4.29 0.00 3.71
2228 2466 3.192541 TCAACTGCTGCTACAAGTTCA 57.807 42.857 0.00 0.00 0.00 3.18
2239 2477 3.686726 GGGAGTAACATCTTCAACTGCTG 59.313 47.826 0.00 0.00 31.69 4.41
2321 2559 7.065683 ACAGGATTTTGCCTTTGTTGTAAAAAG 59.934 33.333 0.00 0.00 35.66 2.27
2354 2592 6.698008 TCACCCACATGCTTATTCAATTAG 57.302 37.500 0.00 0.00 0.00 1.73
2356 2594 5.999205 TTCACCCACATGCTTATTCAATT 57.001 34.783 0.00 0.00 0.00 2.32
2366 2604 4.160252 AGGATTTTACATTCACCCACATGC 59.840 41.667 0.00 0.00 0.00 4.06
2387 2625 1.302832 AGGAAACTTCTGCGGCAGG 60.303 57.895 28.18 16.33 37.44 4.85
2407 2645 5.059833 TGGTATTTGCAAAATCAAACCCAC 58.940 37.500 17.19 3.41 38.58 4.61
2412 2650 6.292596 GCGAAACTGGTATTTGCAAAATCAAA 60.293 34.615 17.19 0.57 39.87 2.69
2413 2651 5.176590 GCGAAACTGGTATTTGCAAAATCAA 59.823 36.000 17.19 5.01 37.18 2.57
2424 2662 5.801380 TCTCCTAAAAGCGAAACTGGTATT 58.199 37.500 0.00 0.00 0.00 1.89
2436 2674 9.780186 ATGTATACTGGTAATTCTCCTAAAAGC 57.220 33.333 4.17 0.00 0.00 3.51
2469 2707 9.716507 TTAACAAGCTGAAGAAAATAATATCGC 57.283 29.630 0.00 0.00 0.00 4.58
2483 2721 5.299028 TGCTCACTTTCATTAACAAGCTGAA 59.701 36.000 0.00 0.00 0.00 3.02
2505 2743 4.053295 TCAAACAGTTACGACCTTACTGC 58.947 43.478 0.00 0.00 42.28 4.40
2506 2744 6.257193 ACTTTCAAACAGTTACGACCTTACTG 59.743 38.462 0.00 0.00 43.72 2.74
2507 2745 6.343703 ACTTTCAAACAGTTACGACCTTACT 58.656 36.000 0.00 0.00 0.00 2.24
2508 2746 6.594284 ACTTTCAAACAGTTACGACCTTAC 57.406 37.500 0.00 0.00 0.00 2.34
2509 2747 8.715191 TTTACTTTCAAACAGTTACGACCTTA 57.285 30.769 0.00 0.00 0.00 2.69
2510 2748 7.550196 TCTTTACTTTCAAACAGTTACGACCTT 59.450 33.333 0.00 0.00 0.00 3.50
2572 2810 6.765036 ACTTGCAGGATCAATCAACACTATAG 59.235 38.462 1.40 0.00 0.00 1.31
2575 2813 4.910195 ACTTGCAGGATCAATCAACACTA 58.090 39.130 1.40 0.00 0.00 2.74
2592 2830 2.746269 TGCAGCATTTCTGAAACTTGC 58.254 42.857 16.92 16.92 45.72 4.01
2606 2844 6.772233 TCTGCTATATAAGGAAAATTGCAGCA 59.228 34.615 11.41 0.00 44.08 4.41
2625 2863 9.376075 CTCTGACATTCTTTAGAATTTCTGCTA 57.624 33.333 15.72 4.57 42.41 3.49
2630 2868 9.500864 GCAATCTCTGACATTCTTTAGAATTTC 57.499 33.333 10.33 10.33 42.41 2.17
2635 2873 5.190528 AGGGCAATCTCTGACATTCTTTAGA 59.809 40.000 0.00 0.00 32.90 2.10
2638 2876 4.313020 AGGGCAATCTCTGACATTCTTT 57.687 40.909 0.00 0.00 32.90 2.52
2640 2878 3.618351 CAAGGGCAATCTCTGACATTCT 58.382 45.455 0.00 0.00 33.82 2.40
2642 2880 2.097825 GCAAGGGCAATCTCTGACATT 58.902 47.619 0.00 0.00 37.62 2.71
2648 2886 5.097234 ACCTATATAGCAAGGGCAATCTCT 58.903 41.667 4.04 0.00 44.61 3.10
2649 2887 5.428184 ACCTATATAGCAAGGGCAATCTC 57.572 43.478 4.04 0.00 44.61 2.75
2686 2924 5.009610 GCCACTCTCATTTTCAACTGGTTTA 59.990 40.000 0.00 0.00 0.00 2.01
2695 2933 3.754850 CAGTCATGCCACTCTCATTTTCA 59.245 43.478 0.00 0.00 0.00 2.69
2727 2965 6.772716 ACATTTCCTGTTTGAAGTATGACTGT 59.227 34.615 0.00 0.00 32.90 3.55
2761 2999 6.227522 TCAAGACTGATGAAACCGTTAATGA 58.772 36.000 0.00 0.00 0.00 2.57
2763 3001 7.362056 CCATTCAAGACTGATGAAACCGTTAAT 60.362 37.037 0.00 0.00 39.98 1.40
2792 3030 4.537135 TTCAGTGCTACTTTCTACAGGG 57.463 45.455 0.00 0.00 0.00 4.45
2795 3033 6.989759 TCATGTTTTCAGTGCTACTTTCTACA 59.010 34.615 0.00 0.00 0.00 2.74
2801 3039 4.278419 GGGTTCATGTTTTCAGTGCTACTT 59.722 41.667 0.00 0.00 0.00 2.24
2819 3057 0.804989 CATCCAAGCGAACAGGGTTC 59.195 55.000 0.00 0.00 0.00 3.62
2820 3058 0.110486 ACATCCAAGCGAACAGGGTT 59.890 50.000 0.00 0.00 0.00 4.11
2823 3061 0.798776 GACACATCCAAGCGAACAGG 59.201 55.000 0.00 0.00 0.00 4.00
2829 3067 1.655484 TATGCAGACACATCCAAGCG 58.345 50.000 0.00 0.00 0.00 4.68
2863 3101 0.396811 GACCACCTGCACTACCAAGT 59.603 55.000 0.00 0.00 35.91 3.16
2864 3102 0.687354 AGACCACCTGCACTACCAAG 59.313 55.000 0.00 0.00 0.00 3.61
3170 3408 6.926826 CGGTAGTTACCAGTAAATATGCATGA 59.073 38.462 10.16 0.00 46.80 3.07
3179 3417 3.652274 GTGCACGGTAGTTACCAGTAAA 58.348 45.455 0.00 0.00 46.80 2.01
3463 3701 1.040893 TCTACGATGATGGTGCCGGT 61.041 55.000 1.90 0.00 0.00 5.28
3613 3851 0.804989 AAAAATCCAAGAGCTCGCCG 59.195 50.000 8.37 0.29 0.00 6.46
3641 3879 6.349300 TCCTGCCAGTATTATTTTCTCAGAC 58.651 40.000 0.00 0.00 0.00 3.51
3644 3882 6.064060 CCATCCTGCCAGTATTATTTTCTCA 58.936 40.000 0.00 0.00 0.00 3.27
3648 3886 5.957774 ACAACCATCCTGCCAGTATTATTTT 59.042 36.000 0.00 0.00 0.00 1.82
3818 4056 2.032722 TCGTTCAAAATTCCGTCCGTTG 60.033 45.455 0.00 0.00 0.00 4.10
3848 4086 2.225068 AGAACCATCGCCTGAATACG 57.775 50.000 0.00 0.00 0.00 3.06
3863 4101 6.584185 TCTTATTTGCCTACCCAAAAGAAC 57.416 37.500 0.00 0.00 38.12 3.01
3901 4139 4.099113 TGTTGTTTCACTGATGCAATGGAA 59.901 37.500 0.00 0.00 0.00 3.53
3935 4173 2.608546 CGTGTGTTCCCGTTAAAACTCA 59.391 45.455 0.00 0.00 0.00 3.41
3979 4225 0.251073 AAATCTCGTGGTTACCCGGG 59.749 55.000 22.25 22.25 0.00 5.73
3994 4240 5.479621 ACCATCTGGCCATGGAATGAAATC 61.480 45.833 28.56 0.00 45.79 2.17
3995 4241 3.631605 ACCATCTGGCCATGGAATGAAAT 60.632 43.478 28.56 4.64 45.79 2.17
3999 4245 1.784358 AACCATCTGGCCATGGAATG 58.216 50.000 28.56 18.20 45.79 2.67
4012 4258 8.662781 TCTTGTATTAGCAGATTGTAACCATC 57.337 34.615 0.00 0.00 0.00 3.51
4014 4260 8.892723 CAATCTTGTATTAGCAGATTGTAACCA 58.107 33.333 11.39 0.00 40.25 3.67
4039 4285 2.307496 AGGCCACCATTTCATTCACA 57.693 45.000 5.01 0.00 0.00 3.58
4040 4286 5.111293 CAATAAGGCCACCATTTCATTCAC 58.889 41.667 5.01 0.00 0.00 3.18
4047 4293 2.027285 GGTTGCAATAAGGCCACCATTT 60.027 45.455 5.01 0.00 46.06 2.32
4053 4299 1.617850 CTGTTGGTTGCAATAAGGCCA 59.382 47.619 5.01 1.28 0.00 5.36
4075 4321 1.133598 CTCGTACCGCTCATAACACCA 59.866 52.381 0.00 0.00 0.00 4.17
4082 4328 3.386768 AATTATGCTCGTACCGCTCAT 57.613 42.857 3.80 0.00 0.00 2.90
4088 4334 3.913163 GTCTCGCTAATTATGCTCGTACC 59.087 47.826 5.69 0.00 0.00 3.34
4122 4369 7.962995 TTGAGATAGCTAGGTCCCATAATAG 57.037 40.000 0.00 0.00 0.00 1.73
4133 4380 8.738645 AGTTTAAACCAATTGAGATAGCTAGG 57.261 34.615 14.72 0.00 0.00 3.02
4215 4462 2.113860 TATGTCAGTGCTTCCCTTGC 57.886 50.000 0.00 0.00 0.00 4.01
4217 4464 4.985538 TCTTTTATGTCAGTGCTTCCCTT 58.014 39.130 0.00 0.00 0.00 3.95
4227 4474 7.538334 CGATGATAGCTCTCTCTTTTATGTCAG 59.462 40.741 0.00 0.00 0.00 3.51
4228 4475 7.229506 TCGATGATAGCTCTCTCTTTTATGTCA 59.770 37.037 0.00 0.00 0.00 3.58
4235 4482 4.518970 GGACTCGATGATAGCTCTCTCTTT 59.481 45.833 0.00 0.00 0.00 2.52
4237 4484 3.674997 GGACTCGATGATAGCTCTCTCT 58.325 50.000 0.00 0.00 0.00 3.10
4238 4485 2.415168 CGGACTCGATGATAGCTCTCTC 59.585 54.545 0.00 0.00 39.00 3.20
4252 4499 2.022129 GTTGCACTGGTCGGACTCG 61.022 63.158 8.23 2.14 37.82 4.18
4262 4509 1.002430 TCTAGCCTTCCTGTTGCACTG 59.998 52.381 0.00 0.00 0.00 3.66
4266 4513 3.828875 ATAGTCTAGCCTTCCTGTTGC 57.171 47.619 0.00 0.00 0.00 4.17
4295 4544 7.741027 AGCAATAATGATAGGAATGTCACTG 57.259 36.000 0.00 0.00 0.00 3.66
4298 4547 8.750515 TTCAAGCAATAATGATAGGAATGTCA 57.249 30.769 0.00 0.00 0.00 3.58
4357 4606 3.754965 ACTTTTGCTTCATACCAGCTGA 58.245 40.909 17.39 0.00 38.19 4.26
4358 4607 5.393962 GTTACTTTTGCTTCATACCAGCTG 58.606 41.667 6.78 6.78 38.19 4.24
4365 4614 7.759489 ATTGTGAGGTTACTTTTGCTTCATA 57.241 32.000 0.00 0.00 0.00 2.15
4377 4626 5.298276 TGAGGAACAACAATTGTGAGGTTAC 59.702 40.000 12.82 16.54 44.59 2.50
4381 4630 4.580167 TCTTGAGGAACAACAATTGTGAGG 59.420 41.667 12.82 7.68 44.59 3.86
4387 4636 6.351286 GGGCATAATCTTGAGGAACAACAATT 60.351 38.462 0.00 0.00 34.56 2.32
4388 4637 5.127682 GGGCATAATCTTGAGGAACAACAAT 59.872 40.000 0.00 0.00 34.56 2.71
4389 4638 4.462483 GGGCATAATCTTGAGGAACAACAA 59.538 41.667 0.00 0.00 34.56 2.83
4390 4639 4.016444 GGGCATAATCTTGAGGAACAACA 58.984 43.478 0.00 0.00 34.56 3.33
4417 4666 4.305539 TCCTCAAAGGATGAATCAGCAA 57.694 40.909 0.00 0.00 40.06 3.91
4432 4681 1.003118 CGGATGGGTCTTTGTCCTCAA 59.997 52.381 0.00 0.00 0.00 3.02
4439 4688 2.620251 TATCAGCGGATGGGTCTTTG 57.380 50.000 9.82 0.00 34.89 2.77
4452 4701 4.105486 GCGGATTGGTTTTCTTTATCAGC 58.895 43.478 0.00 0.00 31.39 4.26
4454 4703 4.157656 CCAGCGGATTGGTTTTCTTTATCA 59.842 41.667 0.00 0.00 33.38 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.