Multiple sequence alignment - TraesCS2A01G327100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G327100 chr2A 100.000 4564 0 0 1 4564 558535238 558530675 0.000000e+00 8429.0
1 TraesCS2A01G327100 chr2B 93.378 1948 67 28 2175 4107 506176555 506178455 0.000000e+00 2826.0
2 TraesCS2A01G327100 chr2B 93.045 1639 69 25 547 2164 506174891 506176505 0.000000e+00 2353.0
3 TraesCS2A01G327100 chr2B 82.174 230 24 12 4106 4319 678956656 678956428 1.010000e-41 182.0
4 TraesCS2A01G327100 chr2B 97.403 77 2 0 4488 4564 506207572 506207648 1.030000e-26 132.0
5 TraesCS2A01G327100 chr2B 91.398 93 7 1 4272 4364 216462986 216463077 4.790000e-25 126.0
6 TraesCS2A01G327100 chr2B 97.436 39 1 0 4453 4491 506206758 506206720 2.950000e-07 67.6
7 TraesCS2A01G327100 chr2D 93.461 1927 81 23 2175 4070 429084688 429086600 0.000000e+00 2819.0
8 TraesCS2A01G327100 chr2D 91.258 1304 61 20 573 1851 429082868 429084143 0.000000e+00 1727.0
9 TraesCS2A01G327100 chr2D 86.413 184 18 4 1978 2154 429084207 429084390 1.300000e-45 195.0
10 TraesCS2A01G327100 chr2D 95.181 83 4 0 4363 4445 429087146 429087228 1.030000e-26 132.0
11 TraesCS2A01G327100 chr2D 95.455 44 2 0 4448 4491 429087275 429087232 2.280000e-08 71.3
12 TraesCS2A01G327100 chr4A 85.533 394 48 8 139 529 109429515 109429128 1.980000e-108 403.0
13 TraesCS2A01G327100 chr4A 93.333 150 8 1 1 148 109429687 109429538 2.140000e-53 220.0
14 TraesCS2A01G327100 chr4A 85.075 134 15 4 4235 4364 36531574 36531706 1.030000e-26 132.0
15 TraesCS2A01G327100 chr4D 83.911 404 48 14 133 529 355853531 355853924 2.010000e-98 370.0
16 TraesCS2A01G327100 chr4D 97.297 37 1 0 4457 4493 392724903 392724939 3.810000e-06 63.9
17 TraesCS2A01G327100 chr7D 82.663 398 55 13 138 529 4410611 4410222 1.570000e-89 340.0
18 TraesCS2A01G327100 chr7D 92.000 150 10 1 1 148 4410782 4410633 4.630000e-50 209.0
19 TraesCS2A01G327100 chr7D 97.959 49 1 0 1 49 4410988 4410940 8.140000e-13 86.1
20 TraesCS2A01G327100 chr4B 81.790 324 27 12 1 299 439314701 439315017 4.560000e-60 243.0
21 TraesCS2A01G327100 chr3D 81.685 273 36 11 4105 4364 168186566 168186295 9.940000e-52 215.0
22 TraesCS2A01G327100 chr7B 80.882 272 40 9 4108 4367 29313121 29313392 2.150000e-48 204.0
23 TraesCS2A01G327100 chr7B 81.091 275 35 6 4105 4364 586328557 586328829 2.150000e-48 204.0
24 TraesCS2A01G327100 chr7B 89.781 137 12 1 4108 4242 108987896 108987760 1.690000e-39 174.0
25 TraesCS2A01G327100 chr7B 81.679 131 20 1 407 533 552125339 552125209 6.240000e-19 106.0
26 TraesCS2A01G327100 chr5D 80.970 268 39 8 4108 4364 57849798 57850064 7.740000e-48 202.0
27 TraesCS2A01G327100 chr5D 90.625 96 8 1 4272 4367 390357146 390357240 4.790000e-25 126.0
28 TraesCS2A01G327100 chr5D 90.625 96 7 2 4279 4373 544664132 544664038 4.790000e-25 126.0
29 TraesCS2A01G327100 chr5B 81.091 275 33 11 4106 4361 71715629 71715903 7.740000e-48 202.0
30 TraesCS2A01G327100 chr3B 79.336 271 37 8 4108 4364 694098826 694099091 6.070000e-39 172.0
31 TraesCS2A01G327100 chr6B 84.337 166 21 4 4103 4263 333895365 333895530 1.700000e-34 158.0
32 TraesCS2A01G327100 chr6B 86.486 74 9 1 385 457 49738439 49738512 3.790000e-11 80.5
33 TraesCS2A01G327100 chr5A 85.517 145 11 6 4230 4364 303232310 303232166 4.760000e-30 143.0
34 TraesCS2A01G327100 chr5A 84.932 146 17 5 4235 4378 570012670 570012528 4.760000e-30 143.0
35 TraesCS2A01G327100 chr7A 83.544 158 14 7 4230 4376 337925940 337926096 2.210000e-28 137.0
36 TraesCS2A01G327100 chr7A 100.000 44 0 0 1 44 4202091 4202048 1.050000e-11 82.4
37 TraesCS2A01G327100 chr1B 90.625 96 8 1 4272 4367 442069060 442068966 4.790000e-25 126.0
38 TraesCS2A01G327100 chr1B 83.206 131 21 1 4232 4362 600266338 600266467 8.020000e-23 119.0
39 TraesCS2A01G327100 chr6D 89.691 97 10 0 2724 2820 160749038 160749134 1.720000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G327100 chr2A 558530675 558535238 4563 True 8429.00 8429 100.00000 1 4564 1 chr2A.!!$R1 4563
1 TraesCS2A01G327100 chr2B 506174891 506178455 3564 False 2589.50 2826 93.21150 547 4107 2 chr2B.!!$F3 3560
2 TraesCS2A01G327100 chr2D 429082868 429087228 4360 False 1218.25 2819 91.57825 573 4445 4 chr2D.!!$F1 3872
3 TraesCS2A01G327100 chr4A 109429128 109429687 559 True 311.50 403 89.43300 1 529 2 chr4A.!!$R1 528
4 TraesCS2A01G327100 chr7D 4410222 4410988 766 True 211.70 340 90.87400 1 529 3 chr7D.!!$R1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
536 784 0.181587 TCACAACCCGGCTGAAAAGA 59.818 50.0 8.63 0.0 0.00 2.52 F
550 798 0.324091 AAAAGATCAGCTGGCAGGGG 60.324 55.0 17.64 0.0 0.00 4.79 F
1694 1984 0.689623 AACCAGCTCCAGGTGAGAAG 59.310 55.0 7.36 0.0 45.66 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1863 2160 0.803768 CGAAGCATCCACTCAGTCCG 60.804 60.000 0.0 0.0 0.00 4.79 R
1957 2254 1.202582 CAGACCCACTCTTCGTACCAG 59.797 57.143 0.0 0.0 0.00 4.00 R
3658 4258 0.250727 GCAGGTGCTTGTAAGGTCCA 60.251 55.000 0.0 0.0 38.21 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 290 0.610174 CTAGAGCTGCCACCACTCAA 59.390 55.000 0.00 0.00 32.71 3.02
155 398 2.609610 CCCTTTCTCCCCCGGACA 60.610 66.667 0.73 0.00 0.00 4.02
163 406 3.861797 CCCCCGGACAATCTCCCG 61.862 72.222 0.73 0.00 44.94 5.14
165 408 2.186903 CCCGGACAATCTCCCGTG 59.813 66.667 0.73 0.00 43.93 4.94
173 416 1.613630 AATCTCCCGTGGGCACTCT 60.614 57.895 0.00 0.00 34.68 3.24
174 417 0.325296 AATCTCCCGTGGGCACTCTA 60.325 55.000 0.00 0.00 34.68 2.43
179 422 2.656646 CGTGGGCACTCTACTGCA 59.343 61.111 0.00 0.00 39.08 4.41
203 446 1.208706 CCTTTCTCCTTCCCTCCTCC 58.791 60.000 0.00 0.00 0.00 4.30
204 447 1.274126 CCTTTCTCCTTCCCTCCTCCT 60.274 57.143 0.00 0.00 0.00 3.69
205 448 2.115427 CTTTCTCCTTCCCTCCTCCTC 58.885 57.143 0.00 0.00 0.00 3.71
206 449 1.398799 TTCTCCTTCCCTCCTCCTCT 58.601 55.000 0.00 0.00 0.00 3.69
207 450 0.930726 TCTCCTTCCCTCCTCCTCTC 59.069 60.000 0.00 0.00 0.00 3.20
208 451 0.933700 CTCCTTCCCTCCTCCTCTCT 59.066 60.000 0.00 0.00 0.00 3.10
211 454 1.133482 CCTTCCCTCCTCCTCTCTCTC 60.133 61.905 0.00 0.00 0.00 3.20
212 455 1.852965 CTTCCCTCCTCCTCTCTCTCT 59.147 57.143 0.00 0.00 0.00 3.10
214 457 1.010793 TCCCTCCTCCTCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
226 471 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
229 474 1.070758 CTCTCTCTCTCTCTCTCCCCG 59.929 61.905 0.00 0.00 0.00 5.73
255 500 1.963515 GGCCCTCTCTCTGATTCTCTC 59.036 57.143 0.00 0.00 0.00 3.20
271 516 0.974383 TCTCTCTCGGGTGTTTTCCC 59.026 55.000 0.00 0.00 43.78 3.97
283 528 0.660300 GTTTTCCCGCAACAAGCTCG 60.660 55.000 0.00 0.00 42.61 5.03
433 681 4.747810 CAAAACTTTTCTGCAACTGGACT 58.252 39.130 0.00 0.00 0.00 3.85
435 683 5.405935 AAACTTTTCTGCAACTGGACTTT 57.594 34.783 0.00 0.00 0.00 2.66
449 697 6.816134 ACTGGACTTTTGTTGCAAAATTTT 57.184 29.167 0.00 0.00 0.00 1.82
493 741 2.815384 TGAAGGTGTCACTCGACCA 58.185 52.632 2.35 0.00 41.85 4.02
497 745 0.467474 AGGTGTCACTCGACCACTCA 60.467 55.000 2.35 0.00 41.85 3.41
504 752 1.446792 CTCGACCACTCAATGCGCT 60.447 57.895 9.73 0.00 0.00 5.92
507 755 1.148157 CGACCACTCAATGCGCTAGG 61.148 60.000 9.73 2.34 0.00 3.02
519 767 2.407428 CGCTAGGTCTGACGGCTCA 61.407 63.158 13.84 0.00 0.00 4.26
531 779 4.329545 GGCTCACAACCCGGCTGA 62.330 66.667 8.63 0.00 0.00 4.26
532 780 2.281484 GCTCACAACCCGGCTGAA 60.281 61.111 8.63 0.00 0.00 3.02
533 781 1.896660 GCTCACAACCCGGCTGAAA 60.897 57.895 8.63 0.00 0.00 2.69
534 782 1.452145 GCTCACAACCCGGCTGAAAA 61.452 55.000 8.63 0.00 0.00 2.29
535 783 0.593128 CTCACAACCCGGCTGAAAAG 59.407 55.000 8.63 0.25 0.00 2.27
536 784 0.181587 TCACAACCCGGCTGAAAAGA 59.818 50.000 8.63 0.00 0.00 2.52
537 785 1.202879 TCACAACCCGGCTGAAAAGAT 60.203 47.619 8.63 0.00 0.00 2.40
538 786 1.200020 CACAACCCGGCTGAAAAGATC 59.800 52.381 8.63 0.00 0.00 2.75
539 787 1.202879 ACAACCCGGCTGAAAAGATCA 60.203 47.619 8.63 0.00 36.38 2.92
548 796 1.830279 TGAAAAGATCAGCTGGCAGG 58.170 50.000 17.64 0.00 33.04 4.85
549 797 1.101331 GAAAAGATCAGCTGGCAGGG 58.899 55.000 17.64 0.00 0.00 4.45
550 798 0.324091 AAAAGATCAGCTGGCAGGGG 60.324 55.000 17.64 0.00 0.00 4.79
551 799 2.850828 AAAGATCAGCTGGCAGGGGC 62.851 60.000 17.64 2.33 40.13 5.80
552 800 4.119363 GATCAGCTGGCAGGGGCA 62.119 66.667 17.64 0.00 43.71 5.36
553 801 3.426836 ATCAGCTGGCAGGGGCAT 61.427 61.111 17.64 0.00 43.71 4.40
554 802 2.060567 GATCAGCTGGCAGGGGCATA 62.061 60.000 17.64 0.00 43.71 3.14
555 803 2.065470 ATCAGCTGGCAGGGGCATAG 62.065 60.000 17.64 0.00 43.71 2.23
556 804 4.201122 AGCTGGCAGGGGCATAGC 62.201 66.667 17.64 0.00 46.12 2.97
557 805 4.511246 GCTGGCAGGGGCATAGCA 62.511 66.667 17.64 0.00 45.50 3.49
558 806 2.203308 CTGGCAGGGGCATAGCAG 60.203 66.667 6.61 0.00 43.71 4.24
559 807 3.786884 CTGGCAGGGGCATAGCAGG 62.787 68.421 6.61 0.00 43.71 4.85
571 819 2.548920 GCATAGCAGGCCCGGATATATC 60.549 54.545 0.73 3.96 0.00 1.63
625 878 4.612259 CGCAGGAGAGAAAAAGTCATGTTG 60.612 45.833 0.00 0.00 0.00 3.33
655 908 6.118852 AGAGGCAAGATTATTGAGGTCTTTC 58.881 40.000 0.00 0.00 30.19 2.62
656 909 4.878397 AGGCAAGATTATTGAGGTCTTTCG 59.122 41.667 0.00 0.00 30.19 3.46
679 932 4.022329 GGGGTAGGAAAATTGTGTTCAGTG 60.022 45.833 0.00 0.00 0.00 3.66
749 1003 2.730183 CGTGAGCGTTCAAGAAACAA 57.270 45.000 9.47 0.00 37.77 2.83
750 1004 3.046285 CGTGAGCGTTCAAGAAACAAA 57.954 42.857 9.47 0.00 37.77 2.83
773 1027 3.627577 TGACTGTTTCTTGAACCAGAAGC 59.372 43.478 13.48 4.78 37.45 3.86
789 1043 2.079925 GAAGCAGAAGAAGCCGTTCAT 58.920 47.619 0.00 0.00 34.82 2.57
790 1044 1.731720 AGCAGAAGAAGCCGTTCATC 58.268 50.000 0.00 0.00 34.82 2.92
791 1045 1.002430 AGCAGAAGAAGCCGTTCATCA 59.998 47.619 0.00 0.00 33.60 3.07
799 1053 2.472695 AGCCGTTCATCAGCAGTAAA 57.527 45.000 0.00 0.00 0.00 2.01
802 1056 2.333926 CCGTTCATCAGCAGTAAACGA 58.666 47.619 7.44 0.00 43.89 3.85
806 1060 4.783036 CGTTCATCAGCAGTAAACGAATTG 59.217 41.667 0.00 0.00 43.89 2.32
829 1101 3.137176 TCACCCTGGATCAGATTTGGATC 59.863 47.826 0.00 0.00 40.31 3.36
911 1185 3.314331 CCGACTGCACCCTCCAGT 61.314 66.667 0.00 0.00 45.61 4.00
914 1188 2.122413 ACTGCACCCTCCAGTCCA 60.122 61.111 0.00 0.00 39.19 4.02
915 1189 2.219875 ACTGCACCCTCCAGTCCAG 61.220 63.158 0.00 0.00 39.19 3.86
1694 1984 0.689623 AACCAGCTCCAGGTGAGAAG 59.310 55.000 7.36 0.00 45.66 2.85
1696 1986 1.675801 CAGCTCCAGGTGAGAAGCA 59.324 57.895 0.00 0.00 45.66 3.91
1704 1994 2.286872 CAGGTGAGAAGCATGTCATCC 58.713 52.381 0.00 0.00 30.35 3.51
1712 2002 5.072736 TGAGAAGCATGTCATCCCATATCTT 59.927 40.000 0.00 0.00 0.00 2.40
1713 2003 5.950023 AGAAGCATGTCATCCCATATCTTT 58.050 37.500 0.00 0.00 0.00 2.52
1714 2004 7.083062 AGAAGCATGTCATCCCATATCTTTA 57.917 36.000 0.00 0.00 0.00 1.85
1715 2005 7.166851 AGAAGCATGTCATCCCATATCTTTAG 58.833 38.462 0.00 0.00 0.00 1.85
1716 2006 6.692849 AGCATGTCATCCCATATCTTTAGA 57.307 37.500 0.00 0.00 0.00 2.10
1746 2036 7.195374 TCTGTTTATTTAGAGCCCATGTAGT 57.805 36.000 0.00 0.00 0.00 2.73
1827 2124 6.151144 GTGTGTTTGTCTAGGATTAGGCATTT 59.849 38.462 0.00 0.00 40.95 2.32
1851 2148 1.134551 TGCCACTGTGAGCGCATATTA 60.135 47.619 11.47 0.00 0.00 0.98
1852 2149 1.528586 GCCACTGTGAGCGCATATTAG 59.471 52.381 11.47 3.50 0.00 1.73
1855 2152 1.414181 ACTGTGAGCGCATATTAGGCT 59.586 47.619 11.47 0.00 40.29 4.58
1856 2153 1.797046 CTGTGAGCGCATATTAGGCTG 59.203 52.381 11.47 0.00 37.10 4.85
1857 2154 1.138859 TGTGAGCGCATATTAGGCTGT 59.861 47.619 11.47 0.00 37.10 4.40
1858 2155 1.795286 GTGAGCGCATATTAGGCTGTC 59.205 52.381 11.47 0.00 37.10 3.51
1859 2156 1.688735 TGAGCGCATATTAGGCTGTCT 59.311 47.619 11.47 0.00 37.10 3.41
1861 2158 3.134458 GAGCGCATATTAGGCTGTCTTT 58.866 45.455 11.47 0.00 37.10 2.52
1863 2160 3.561725 AGCGCATATTAGGCTGTCTTTTC 59.438 43.478 11.47 0.00 35.31 2.29
1890 2187 4.433615 TGAGTGGATGCTTCGAATTACTC 58.566 43.478 0.00 7.35 35.20 2.59
1892 2189 5.359860 TGAGTGGATGCTTCGAATTACTCTA 59.640 40.000 0.00 0.00 35.54 2.43
1920 2217 9.169592 GTGCTAAATAGTTTGGGTACTGATTTA 57.830 33.333 0.00 0.00 0.00 1.40
1957 2254 6.073331 GCTAGATTTGTGAGTTCTGATATGCC 60.073 42.308 0.00 0.00 0.00 4.40
1967 2264 4.051922 GTTCTGATATGCCTGGTACGAAG 58.948 47.826 0.00 0.00 0.00 3.79
2027 2324 2.327325 TAGGATCAGGTATGAGGGCC 57.673 55.000 0.00 0.00 39.29 5.80
2037 2334 2.706190 GGTATGAGGGCCAGTCTGTATT 59.294 50.000 6.18 0.00 0.00 1.89
2158 2696 4.563061 AGGACGCGTTGAAGTACTATTTT 58.437 39.130 15.53 0.00 27.98 1.82
2164 2702 6.630045 ACGCGTTGAAGTACTATTTTTGTTTC 59.370 34.615 5.58 0.00 0.00 2.78
2167 2705 7.853929 GCGTTGAAGTACTATTTTTGTTTCTGA 59.146 33.333 0.00 0.00 0.00 3.27
2168 2706 9.710979 CGTTGAAGTACTATTTTTGTTTCTGAA 57.289 29.630 0.00 0.00 0.00 3.02
2380 2970 7.093992 GGAGAATCATCGATTAAAGTAGGGAG 58.906 42.308 0.00 0.00 36.25 4.30
2407 2997 5.240713 AGTACTTTCATATTGCTTGCTGC 57.759 39.130 0.00 0.00 43.25 5.25
2426 3016 5.186992 TGCTGCTACTGGTAAGAGATGTTTA 59.813 40.000 0.00 0.00 0.00 2.01
2495 3085 6.673154 TCATTTAACAGCAGACATGAGATG 57.327 37.500 0.00 0.12 0.00 2.90
2502 3092 1.865970 GCAGACATGAGATGTGCTAGC 59.134 52.381 8.10 8.10 45.03 3.42
2525 3115 8.847444 AGCTATAAAATGCTGATTTTCTTTCG 57.153 30.769 0.00 0.00 40.31 3.46
2746 3340 7.020827 TCTCTTCCTGATACTGTTGGATTTT 57.979 36.000 0.00 0.00 0.00 1.82
3083 3680 5.591472 CCTGGATGCTCATTTCAATGAACTA 59.409 40.000 0.00 0.00 44.20 2.24
3200 3797 2.743928 GACCTGCTGAACCTGCGG 60.744 66.667 0.00 0.00 35.04 5.69
3407 4004 4.478371 CAGAGGAGCATGGCGGCA 62.478 66.667 16.34 16.34 35.83 5.69
3638 4238 2.166907 ACTCTCGACCTGGGAATCAT 57.833 50.000 0.00 0.00 0.00 2.45
3643 4243 2.091541 TCGACCTGGGAATCATTTTGC 58.908 47.619 0.00 0.00 0.00 3.68
3658 4258 2.325583 TTTGCGTTCCTGTTGACTCT 57.674 45.000 0.00 0.00 0.00 3.24
3660 4260 0.249868 TGCGTTCCTGTTGACTCTGG 60.250 55.000 0.00 0.00 0.00 3.86
3672 4282 2.325484 TGACTCTGGACCTTACAAGCA 58.675 47.619 0.00 0.00 0.00 3.91
3682 4292 0.326264 CTTACAAGCACCTGCCCTCT 59.674 55.000 0.00 0.00 43.38 3.69
3746 4360 0.918983 TCATTTCCATCGAAGGCCCT 59.081 50.000 0.65 0.00 0.00 5.19
3761 4375 1.072648 GGCCCTGGTTGTGTTACTGTA 59.927 52.381 0.00 0.00 0.00 2.74
3762 4376 2.290705 GGCCCTGGTTGTGTTACTGTAT 60.291 50.000 0.00 0.00 0.00 2.29
3793 4407 2.694109 AGGGCTGAAACTCGGTATACTC 59.306 50.000 2.25 0.00 0.00 2.59
3819 4433 7.748683 CGCTTTATTATTAGACTGTTTGCAACA 59.251 33.333 0.00 0.00 39.52 3.33
3928 4542 4.815269 CCAGGTTTTGTTTGTGAGAACAA 58.185 39.130 0.00 0.00 45.07 2.83
3938 4552 4.712122 TTGTGAGAACAAACTTCAACCC 57.288 40.909 0.00 0.00 0.00 4.11
3939 4553 3.963129 TGTGAGAACAAACTTCAACCCT 58.037 40.909 0.00 0.00 0.00 4.34
3940 4554 3.694072 TGTGAGAACAAACTTCAACCCTG 59.306 43.478 0.00 0.00 0.00 4.45
3941 4555 3.694566 GTGAGAACAAACTTCAACCCTGT 59.305 43.478 0.00 0.00 0.00 4.00
3942 4556 3.945285 TGAGAACAAACTTCAACCCTGTC 59.055 43.478 0.00 0.00 0.00 3.51
3943 4557 3.945285 GAGAACAAACTTCAACCCTGTCA 59.055 43.478 0.00 0.00 0.00 3.58
3944 4558 4.536765 AGAACAAACTTCAACCCTGTCAT 58.463 39.130 0.00 0.00 0.00 3.06
3945 4559 4.956075 AGAACAAACTTCAACCCTGTCATT 59.044 37.500 0.00 0.00 0.00 2.57
3946 4560 4.918810 ACAAACTTCAACCCTGTCATTC 57.081 40.909 0.00 0.00 0.00 2.67
3947 4561 3.636764 ACAAACTTCAACCCTGTCATTCC 59.363 43.478 0.00 0.00 0.00 3.01
3948 4562 2.586648 ACTTCAACCCTGTCATTCCC 57.413 50.000 0.00 0.00 0.00 3.97
3949 4563 1.271379 ACTTCAACCCTGTCATTCCCG 60.271 52.381 0.00 0.00 0.00 5.14
3950 4564 1.003118 CTTCAACCCTGTCATTCCCGA 59.997 52.381 0.00 0.00 0.00 5.14
3951 4565 1.060729 TCAACCCTGTCATTCCCGAA 58.939 50.000 0.00 0.00 0.00 4.30
3952 4566 1.633432 TCAACCCTGTCATTCCCGAAT 59.367 47.619 0.00 0.00 0.00 3.34
3954 4568 0.394352 ACCCTGTCATTCCCGAATGC 60.394 55.000 11.77 8.22 45.77 3.56
3955 4569 1.103398 CCCTGTCATTCCCGAATGCC 61.103 60.000 11.77 2.35 45.77 4.40
3981 4622 8.950210 CCTCAATTTGTGAAGTCATACAGTAAT 58.050 33.333 0.12 0.00 35.22 1.89
4111 4779 9.846248 AGTTCAATGCAAAAACATCTTATACTC 57.154 29.630 10.61 0.00 0.00 2.59
4112 4780 9.076596 GTTCAATGCAAAAACATCTTATACTCC 57.923 33.333 0.00 0.00 0.00 3.85
4117 4785 5.007724 GCAAAAACATCTTATACTCCCTCCG 59.992 44.000 0.00 0.00 0.00 4.63
4119 4787 5.952347 AAACATCTTATACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
4122 4790 3.967467 TCTTATACTCCCTCCGTTCCT 57.033 47.619 0.00 0.00 0.00 3.36
4123 4791 5.163012 ACATCTTATACTCCCTCCGTTCCTA 60.163 44.000 0.00 0.00 0.00 2.94
4127 4795 7.529555 TCTTATACTCCCTCCGTTCCTAAATA 58.470 38.462 0.00 0.00 0.00 1.40
4128 4796 7.449704 TCTTATACTCCCTCCGTTCCTAAATAC 59.550 40.741 0.00 0.00 0.00 1.89
4129 4797 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
4130 4798 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
4131 4799 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
4133 4801 3.306613 CCTCCGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
4134 4802 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
4136 4804 3.958798 TCCGTTCCTAAATACTCCCTCTG 59.041 47.826 0.00 0.00 0.00 3.35
4137 4805 3.705072 CCGTTCCTAAATACTCCCTCTGT 59.295 47.826 0.00 0.00 0.00 3.41
4139 4807 5.349809 CGTTCCTAAATACTCCCTCTGTTC 58.650 45.833 0.00 0.00 0.00 3.18
4140 4808 5.672503 GTTCCTAAATACTCCCTCTGTTCC 58.327 45.833 0.00 0.00 0.00 3.62
4142 4810 3.958798 CCTAAATACTCCCTCTGTTCCGA 59.041 47.826 0.00 0.00 0.00 4.55
4143 4811 4.404715 CCTAAATACTCCCTCTGTTCCGAA 59.595 45.833 0.00 0.00 0.00 4.30
4144 4812 5.070580 CCTAAATACTCCCTCTGTTCCGAAT 59.929 44.000 0.00 0.00 0.00 3.34
4145 4813 5.437191 AAATACTCCCTCTGTTCCGAATT 57.563 39.130 0.00 0.00 0.00 2.17
4146 4814 6.555463 AAATACTCCCTCTGTTCCGAATTA 57.445 37.500 0.00 0.00 0.00 1.40
4147 4815 3.889520 ACTCCCTCTGTTCCGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
4148 4816 3.442076 ACTCCCTCTGTTCCGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
4149 4817 3.838903 ACTCCCTCTGTTCCGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
4150 4818 4.184629 CTCCCTCTGTTCCGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
4151 4819 3.581332 TCCCTCTGTTCCGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
4152 4820 3.933332 CCCTCTGTTCCGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
4153 4821 3.612860 CCTCTGTTCCGAATTACTTGTCG 59.387 47.826 0.00 0.00 37.01 4.35
4154 4822 4.235360 CTCTGTTCCGAATTACTTGTCGT 58.765 43.478 0.00 0.00 35.48 4.34
4155 4823 5.375417 TCTGTTCCGAATTACTTGTCGTA 57.625 39.130 0.00 0.00 35.48 3.43
4156 4824 5.396484 TCTGTTCCGAATTACTTGTCGTAG 58.604 41.667 0.00 0.00 35.48 3.51
4157 4825 4.487948 TGTTCCGAATTACTTGTCGTAGG 58.512 43.478 0.00 0.00 35.48 3.18
4158 4826 4.022068 TGTTCCGAATTACTTGTCGTAGGT 60.022 41.667 0.00 0.00 35.48 3.08
4159 4827 5.182950 TGTTCCGAATTACTTGTCGTAGGTA 59.817 40.000 0.00 0.00 35.48 3.08
4160 4828 6.127647 TGTTCCGAATTACTTGTCGTAGGTAT 60.128 38.462 0.00 0.00 35.48 2.73
4161 4829 5.824429 TCCGAATTACTTGTCGTAGGTATG 58.176 41.667 0.00 0.00 35.48 2.39
4162 4830 4.980434 CCGAATTACTTGTCGTAGGTATGG 59.020 45.833 0.00 0.00 35.48 2.74
4163 4831 5.221106 CCGAATTACTTGTCGTAGGTATGGA 60.221 44.000 0.00 0.00 35.48 3.41
4165 4833 6.362551 CGAATTACTTGTCGTAGGTATGGATG 59.637 42.308 0.00 0.00 32.61 3.51
4167 4835 7.828508 ATTACTTGTCGTAGGTATGGATGTA 57.171 36.000 0.00 0.00 0.00 2.29
4168 4836 7.828508 TTACTTGTCGTAGGTATGGATGTAT 57.171 36.000 0.00 0.00 0.00 2.29
4169 4837 6.726490 ACTTGTCGTAGGTATGGATGTATT 57.274 37.500 0.00 0.00 0.00 1.89
4170 4838 7.120923 ACTTGTCGTAGGTATGGATGTATTT 57.879 36.000 0.00 0.00 0.00 1.40
4171 4839 8.241497 ACTTGTCGTAGGTATGGATGTATTTA 57.759 34.615 0.00 0.00 0.00 1.40
4172 4840 8.358148 ACTTGTCGTAGGTATGGATGTATTTAG 58.642 37.037 0.00 0.00 0.00 1.85
4173 4841 8.467963 TTGTCGTAGGTATGGATGTATTTAGA 57.532 34.615 0.00 0.00 0.00 2.10
4174 4842 8.645814 TGTCGTAGGTATGGATGTATTTAGAT 57.354 34.615 0.00 0.00 0.00 1.98
4175 4843 8.520351 TGTCGTAGGTATGGATGTATTTAGATG 58.480 37.037 0.00 0.00 0.00 2.90
4176 4844 8.521176 GTCGTAGGTATGGATGTATTTAGATGT 58.479 37.037 0.00 0.00 0.00 3.06
4177 4845 9.743581 TCGTAGGTATGGATGTATTTAGATGTA 57.256 33.333 0.00 0.00 0.00 2.29
4205 4873 9.554395 TTTATCTAGATACATCCATTTTTGCGA 57.446 29.630 12.12 0.00 0.00 5.10
4206 4874 6.844696 TCTAGATACATCCATTTTTGCGAC 57.155 37.500 0.00 0.00 0.00 5.19
4207 4875 4.536364 AGATACATCCATTTTTGCGACG 57.464 40.909 0.00 0.00 0.00 5.12
4208 4876 4.188462 AGATACATCCATTTTTGCGACGA 58.812 39.130 0.00 0.00 0.00 4.20
4209 4877 2.900122 ACATCCATTTTTGCGACGAG 57.100 45.000 0.00 0.00 0.00 4.18
4210 4878 2.151202 ACATCCATTTTTGCGACGAGT 58.849 42.857 0.00 0.00 0.00 4.18
4211 4879 3.331150 ACATCCATTTTTGCGACGAGTA 58.669 40.909 0.00 0.00 0.00 2.59
4212 4880 3.749088 ACATCCATTTTTGCGACGAGTAA 59.251 39.130 0.00 0.00 0.00 2.24
4213 4881 4.394920 ACATCCATTTTTGCGACGAGTAAT 59.605 37.500 0.00 0.00 0.00 1.89
4214 4882 5.106317 ACATCCATTTTTGCGACGAGTAATT 60.106 36.000 0.00 0.00 0.00 1.40
4215 4883 5.365403 TCCATTTTTGCGACGAGTAATTT 57.635 34.783 0.00 0.00 0.00 1.82
4216 4884 5.150683 TCCATTTTTGCGACGAGTAATTTG 58.849 37.500 0.00 0.00 0.00 2.32
4217 4885 4.323336 CCATTTTTGCGACGAGTAATTTGG 59.677 41.667 0.00 0.00 0.00 3.28
4218 4886 4.815040 TTTTTGCGACGAGTAATTTGGA 57.185 36.364 0.00 0.00 0.00 3.53
4219 4887 4.815040 TTTTGCGACGAGTAATTTGGAA 57.185 36.364 0.00 0.00 0.00 3.53
4220 4888 3.799137 TTGCGACGAGTAATTTGGAAC 57.201 42.857 0.00 0.00 0.00 3.62
4221 4889 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
4222 4890 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
4223 4891 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
4224 4892 3.184541 CGACGAGTAATTTGGAACGGAT 58.815 45.455 0.00 0.00 0.00 4.18
4225 4893 3.000078 CGACGAGTAATTTGGAACGGATG 60.000 47.826 0.00 0.00 0.00 3.51
4226 4894 3.267483 ACGAGTAATTTGGAACGGATGG 58.733 45.455 0.00 0.00 0.00 3.51
4228 4896 3.555956 CGAGTAATTTGGAACGGATGGAG 59.444 47.826 0.00 0.00 0.00 3.86
4235 4903 5.687166 TTTGGAACGGATGGAGTATAAGT 57.313 39.130 0.00 0.00 0.00 2.24
4239 4907 5.068723 TGGAACGGATGGAGTATAAGTCTTC 59.931 44.000 0.00 0.00 0.00 2.87
4242 4910 7.014038 GGAACGGATGGAGTATAAGTCTTCTTA 59.986 40.741 0.00 0.00 39.95 2.10
4264 4932 8.296713 TCTTAGACATTTTAAATGGACAACAGC 58.703 33.333 20.00 1.80 0.00 4.40
4266 4934 6.996509 AGACATTTTAAATGGACAACAGCAT 58.003 32.000 20.00 0.00 0.00 3.79
4267 4935 8.121305 AGACATTTTAAATGGACAACAGCATA 57.879 30.769 20.00 0.00 0.00 3.14
4268 4936 8.028938 AGACATTTTAAATGGACAACAGCATAC 58.971 33.333 20.00 0.00 0.00 2.39
4270 4938 4.955925 TTAAATGGACAACAGCATACGG 57.044 40.909 0.00 0.00 0.00 4.02
4271 4939 2.779755 AATGGACAACAGCATACGGA 57.220 45.000 0.00 0.00 0.00 4.69
4272 4940 3.281727 AATGGACAACAGCATACGGAT 57.718 42.857 0.00 0.00 0.00 4.18
4273 4941 2.022764 TGGACAACAGCATACGGATG 57.977 50.000 2.22 2.22 39.32 3.51
4290 4958 8.865420 ATACGGATGTATGTAGAGTGTAGATT 57.135 34.615 0.00 0.00 39.81 2.40
4291 4959 7.204496 ACGGATGTATGTAGAGTGTAGATTC 57.796 40.000 0.00 0.00 0.00 2.52
4292 4960 6.771267 ACGGATGTATGTAGAGTGTAGATTCA 59.229 38.462 0.00 0.00 0.00 2.57
4293 4961 7.448777 ACGGATGTATGTAGAGTGTAGATTCAT 59.551 37.037 0.00 0.00 0.00 2.57
4295 4963 9.632807 GGATGTATGTAGAGTGTAGATTCATTC 57.367 37.037 0.00 0.00 0.00 2.67
4302 4970 8.668353 TGTAGAGTGTAGATTCATTCATTTTGC 58.332 33.333 0.00 0.00 0.00 3.68
4303 4971 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
4304 4972 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
4305 4973 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
4306 4974 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
4307 4975 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
4310 4978 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
4311 4979 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
4312 4980 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
4313 4981 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
4315 4983 6.597672 TCATTCATTTTGCTCCGTATGTAGTT 59.402 34.615 0.00 0.00 0.00 2.24
4322 4990 5.395682 TGCTCCGTATGTAGTTACTTGTT 57.604 39.130 0.00 0.00 0.00 2.83
4323 4991 5.165676 TGCTCCGTATGTAGTTACTTGTTG 58.834 41.667 0.00 0.00 0.00 3.33
4324 4992 5.047872 TGCTCCGTATGTAGTTACTTGTTGA 60.048 40.000 0.00 0.00 0.00 3.18
4325 4993 5.865552 GCTCCGTATGTAGTTACTTGTTGAA 59.134 40.000 0.00 0.00 0.00 2.69
4326 4994 6.366877 GCTCCGTATGTAGTTACTTGTTGAAA 59.633 38.462 0.00 0.00 0.00 2.69
4328 4996 8.470040 TCCGTATGTAGTTACTTGTTGAAATC 57.530 34.615 0.00 0.00 0.00 2.17
4329 4997 8.308931 TCCGTATGTAGTTACTTGTTGAAATCT 58.691 33.333 0.00 0.00 0.00 2.40
4330 4998 8.592998 CCGTATGTAGTTACTTGTTGAAATCTC 58.407 37.037 0.00 0.00 0.00 2.75
4331 4999 9.355215 CGTATGTAGTTACTTGTTGAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
4338 5006 9.495572 AGTTACTTGTTGAAATCTCTAGAAAGG 57.504 33.333 0.00 0.00 0.00 3.11
4339 5007 6.809630 ACTTGTTGAAATCTCTAGAAAGGC 57.190 37.500 0.00 0.00 0.00 4.35
4340 5008 6.538263 ACTTGTTGAAATCTCTAGAAAGGCT 58.462 36.000 0.00 0.00 0.00 4.58
4342 5010 6.808008 TGTTGAAATCTCTAGAAAGGCTTG 57.192 37.500 0.00 0.00 0.00 4.01
4343 5011 6.299141 TGTTGAAATCTCTAGAAAGGCTTGT 58.701 36.000 0.00 0.00 0.00 3.16
4345 5013 8.103305 TGTTGAAATCTCTAGAAAGGCTTGTAT 58.897 33.333 0.00 0.00 0.00 2.29
4346 5014 8.951243 GTTGAAATCTCTAGAAAGGCTTGTATT 58.049 33.333 0.00 0.00 0.00 1.89
4347 5015 9.520515 TTGAAATCTCTAGAAAGGCTTGTATTT 57.479 29.630 0.00 0.02 0.00 1.40
4348 5016 8.950210 TGAAATCTCTAGAAAGGCTTGTATTTG 58.050 33.333 0.00 0.00 0.00 2.32
4350 5018 8.729805 AATCTCTAGAAAGGCTTGTATTTGAG 57.270 34.615 0.00 4.87 0.00 3.02
4353 5021 7.819900 TCTCTAGAAAGGCTTGTATTTGAGAAC 59.180 37.037 0.00 0.00 0.00 3.01
4355 5023 4.455877 AGAAAGGCTTGTATTTGAGAACGG 59.544 41.667 0.00 0.00 0.00 4.44
4356 5024 3.695830 AGGCTTGTATTTGAGAACGGA 57.304 42.857 0.00 0.00 0.00 4.69
4357 5025 3.600388 AGGCTTGTATTTGAGAACGGAG 58.400 45.455 0.00 0.00 0.00 4.63
4358 5026 2.678336 GGCTTGTATTTGAGAACGGAGG 59.322 50.000 0.00 0.00 0.00 4.30
4359 5027 2.678336 GCTTGTATTTGAGAACGGAGGG 59.322 50.000 0.00 0.00 0.00 4.30
4361 5029 3.887621 TGTATTTGAGAACGGAGGGAG 57.112 47.619 0.00 0.00 0.00 4.30
4389 5345 1.886886 TAGGAACAACAACTTCGGGC 58.113 50.000 0.00 0.00 0.00 6.13
4395 5351 0.523072 CAACAACTTCGGGCATCAGG 59.477 55.000 0.00 0.00 0.00 3.86
4429 5385 1.263217 ACGAATTCCGAACAGTTGTGC 59.737 47.619 0.00 0.00 41.76 4.57
4445 5401 5.762045 AGTTGTGCTAAACTGTAATGCTTG 58.238 37.500 4.11 0.00 38.95 4.01
4446 5402 5.299279 AGTTGTGCTAAACTGTAATGCTTGT 59.701 36.000 4.11 0.00 38.95 3.16
4447 5403 5.107109 TGTGCTAAACTGTAATGCTTGTG 57.893 39.130 0.00 0.00 0.00 3.33
4448 5404 4.819088 TGTGCTAAACTGTAATGCTTGTGA 59.181 37.500 0.00 0.00 0.00 3.58
4449 5405 5.147162 GTGCTAAACTGTAATGCTTGTGAC 58.853 41.667 0.00 0.00 0.00 3.67
4450 5406 4.819088 TGCTAAACTGTAATGCTTGTGACA 59.181 37.500 0.00 0.00 0.00 3.58
4451 5407 5.147162 GCTAAACTGTAATGCTTGTGACAC 58.853 41.667 0.00 0.00 0.00 3.67
4452 5408 3.878086 AACTGTAATGCTTGTGACACG 57.122 42.857 0.22 0.00 0.00 4.49
4453 5409 1.531149 ACTGTAATGCTTGTGACACGC 59.469 47.619 7.15 7.15 0.00 5.34
4454 5410 1.530720 CTGTAATGCTTGTGACACGCA 59.469 47.619 19.02 19.02 42.43 5.24
4458 5414 0.523072 ATGCTTGTGACACGCATTCC 59.477 50.000 21.77 0.00 44.81 3.01
4459 5415 0.534877 TGCTTGTGACACGCATTCCT 60.535 50.000 12.97 0.00 33.83 3.36
4460 5416 0.166814 GCTTGTGACACGCATTCCTC 59.833 55.000 9.31 0.00 0.00 3.71
4461 5417 1.800805 CTTGTGACACGCATTCCTCT 58.199 50.000 0.22 0.00 0.00 3.69
4462 5418 1.728971 CTTGTGACACGCATTCCTCTC 59.271 52.381 0.22 0.00 0.00 3.20
4463 5419 0.678950 TGTGACACGCATTCCTCTCA 59.321 50.000 0.22 0.00 0.00 3.27
4464 5420 1.276138 TGTGACACGCATTCCTCTCAT 59.724 47.619 0.22 0.00 0.00 2.90
4465 5421 2.289631 TGTGACACGCATTCCTCTCATT 60.290 45.455 0.22 0.00 0.00 2.57
4466 5422 2.349886 GTGACACGCATTCCTCTCATTC 59.650 50.000 0.00 0.00 0.00 2.67
4467 5423 1.936547 GACACGCATTCCTCTCATTCC 59.063 52.381 0.00 0.00 0.00 3.01
4468 5424 1.278985 ACACGCATTCCTCTCATTCCA 59.721 47.619 0.00 0.00 0.00 3.53
4469 5425 2.290260 ACACGCATTCCTCTCATTCCAA 60.290 45.455 0.00 0.00 0.00 3.53
4470 5426 2.749076 CACGCATTCCTCTCATTCCAAA 59.251 45.455 0.00 0.00 0.00 3.28
4471 5427 3.012518 ACGCATTCCTCTCATTCCAAAG 58.987 45.455 0.00 0.00 0.00 2.77
4472 5428 3.012518 CGCATTCCTCTCATTCCAAAGT 58.987 45.455 0.00 0.00 0.00 2.66
4473 5429 3.181503 CGCATTCCTCTCATTCCAAAGTG 60.182 47.826 0.00 0.00 0.00 3.16
4474 5430 3.428589 GCATTCCTCTCATTCCAAAGTGC 60.429 47.826 0.00 0.00 0.00 4.40
4475 5431 2.496899 TCCTCTCATTCCAAAGTGCC 57.503 50.000 0.00 0.00 0.00 5.01
4476 5432 1.004745 TCCTCTCATTCCAAAGTGCCC 59.995 52.381 0.00 0.00 0.00 5.36
4477 5433 1.272092 CCTCTCATTCCAAAGTGCCCA 60.272 52.381 0.00 0.00 0.00 5.36
4478 5434 2.517959 CTCTCATTCCAAAGTGCCCAA 58.482 47.619 0.00 0.00 0.00 4.12
4479 5435 2.229784 CTCTCATTCCAAAGTGCCCAAC 59.770 50.000 0.00 0.00 0.00 3.77
4480 5436 1.962807 CTCATTCCAAAGTGCCCAACA 59.037 47.619 0.00 0.00 0.00 3.33
4481 5437 1.962807 TCATTCCAAAGTGCCCAACAG 59.037 47.619 0.00 0.00 0.00 3.16
4482 5438 1.962807 CATTCCAAAGTGCCCAACAGA 59.037 47.619 0.00 0.00 0.00 3.41
4483 5439 1.398692 TTCCAAAGTGCCCAACAGAC 58.601 50.000 0.00 0.00 0.00 3.51
4484 5440 0.550914 TCCAAAGTGCCCAACAGACT 59.449 50.000 0.00 0.00 0.00 3.24
4485 5441 1.771854 TCCAAAGTGCCCAACAGACTA 59.228 47.619 0.00 0.00 0.00 2.59
4486 5442 2.173782 TCCAAAGTGCCCAACAGACTAA 59.826 45.455 0.00 0.00 0.00 2.24
4487 5443 2.293399 CCAAAGTGCCCAACAGACTAAC 59.707 50.000 0.00 0.00 0.00 2.34
4488 5444 2.948979 CAAAGTGCCCAACAGACTAACA 59.051 45.455 0.00 0.00 0.00 2.41
4489 5445 3.290948 AAGTGCCCAACAGACTAACAA 57.709 42.857 0.00 0.00 0.00 2.83
4490 5446 2.572290 AGTGCCCAACAGACTAACAAC 58.428 47.619 0.00 0.00 0.00 3.32
4491 5447 2.172717 AGTGCCCAACAGACTAACAACT 59.827 45.455 0.00 0.00 0.00 3.16
4492 5448 2.949644 GTGCCCAACAGACTAACAACTT 59.050 45.455 0.00 0.00 0.00 2.66
4493 5449 4.131596 GTGCCCAACAGACTAACAACTTA 58.868 43.478 0.00 0.00 0.00 2.24
4494 5450 4.760204 GTGCCCAACAGACTAACAACTTAT 59.240 41.667 0.00 0.00 0.00 1.73
4495 5451 4.759693 TGCCCAACAGACTAACAACTTATG 59.240 41.667 0.00 0.00 0.00 1.90
4496 5452 4.156008 GCCCAACAGACTAACAACTTATGG 59.844 45.833 0.00 0.00 0.00 2.74
4497 5453 5.556915 CCCAACAGACTAACAACTTATGGA 58.443 41.667 0.00 0.00 0.00 3.41
4498 5454 5.411669 CCCAACAGACTAACAACTTATGGAC 59.588 44.000 0.00 0.00 0.00 4.02
4499 5455 5.411669 CCAACAGACTAACAACTTATGGACC 59.588 44.000 0.00 0.00 0.00 4.46
4500 5456 5.818678 ACAGACTAACAACTTATGGACCA 57.181 39.130 0.00 0.00 0.00 4.02
4501 5457 6.182507 ACAGACTAACAACTTATGGACCAA 57.817 37.500 0.00 0.00 0.00 3.67
4502 5458 6.231211 ACAGACTAACAACTTATGGACCAAG 58.769 40.000 0.00 0.00 0.00 3.61
4503 5459 5.643777 CAGACTAACAACTTATGGACCAAGG 59.356 44.000 0.00 0.00 0.00 3.61
4504 5460 5.309806 AGACTAACAACTTATGGACCAAGGT 59.690 40.000 0.00 0.00 0.00 3.50
4505 5461 5.948842 ACTAACAACTTATGGACCAAGGTT 58.051 37.500 0.00 1.17 0.00 3.50
4506 5462 6.002082 ACTAACAACTTATGGACCAAGGTTC 58.998 40.000 0.00 0.00 0.00 3.62
4507 5463 4.447138 ACAACTTATGGACCAAGGTTCA 57.553 40.909 2.03 2.03 38.10 3.18
4508 5464 4.398319 ACAACTTATGGACCAAGGTTCAG 58.602 43.478 6.36 0.00 37.01 3.02
4509 5465 3.721087 ACTTATGGACCAAGGTTCAGG 57.279 47.619 6.36 2.05 37.01 3.86
4510 5466 3.256704 ACTTATGGACCAAGGTTCAGGA 58.743 45.455 6.36 0.00 37.01 3.86
4511 5467 3.264450 ACTTATGGACCAAGGTTCAGGAG 59.736 47.826 6.36 8.52 37.01 3.69
4512 5468 0.995024 ATGGACCAAGGTTCAGGAGG 59.005 55.000 6.36 0.00 37.01 4.30
4513 5469 0.401395 TGGACCAAGGTTCAGGAGGT 60.401 55.000 0.00 0.00 34.76 3.85
4514 5470 0.036875 GGACCAAGGTTCAGGAGGTG 59.963 60.000 0.00 0.00 31.57 4.00
4515 5471 0.036875 GACCAAGGTTCAGGAGGTGG 59.963 60.000 0.00 0.00 31.57 4.61
4516 5472 0.401395 ACCAAGGTTCAGGAGGTGGA 60.401 55.000 0.00 0.00 0.00 4.02
4517 5473 0.326264 CCAAGGTTCAGGAGGTGGAG 59.674 60.000 0.00 0.00 0.00 3.86
4518 5474 0.322008 CAAGGTTCAGGAGGTGGAGC 60.322 60.000 0.00 0.00 31.46 4.70
4519 5475 0.474660 AAGGTTCAGGAGGTGGAGCT 60.475 55.000 0.00 0.00 45.12 4.09
4520 5476 0.413832 AGGTTCAGGAGGTGGAGCTA 59.586 55.000 0.00 0.00 41.05 3.32
4521 5477 0.827368 GGTTCAGGAGGTGGAGCTAG 59.173 60.000 0.00 0.00 0.00 3.42
4522 5478 1.562783 GTTCAGGAGGTGGAGCTAGT 58.437 55.000 0.00 0.00 0.00 2.57
4523 5479 1.205893 GTTCAGGAGGTGGAGCTAGTG 59.794 57.143 0.00 0.00 0.00 2.74
4524 5480 0.324738 TCAGGAGGTGGAGCTAGTGG 60.325 60.000 0.00 0.00 0.00 4.00
4525 5481 0.616111 CAGGAGGTGGAGCTAGTGGT 60.616 60.000 0.00 0.00 0.00 4.16
4526 5482 0.117340 AGGAGGTGGAGCTAGTGGTT 59.883 55.000 0.00 0.00 0.00 3.67
4527 5483 0.250513 GGAGGTGGAGCTAGTGGTTG 59.749 60.000 0.00 0.00 0.00 3.77
4528 5484 0.250513 GAGGTGGAGCTAGTGGTTGG 59.749 60.000 0.00 0.00 0.00 3.77
4529 5485 0.178903 AGGTGGAGCTAGTGGTTGGA 60.179 55.000 0.00 0.00 0.00 3.53
4530 5486 0.690762 GGTGGAGCTAGTGGTTGGAA 59.309 55.000 0.00 0.00 0.00 3.53
4531 5487 1.610886 GGTGGAGCTAGTGGTTGGAAC 60.611 57.143 0.00 0.00 0.00 3.62
4532 5488 1.071699 GTGGAGCTAGTGGTTGGAACA 59.928 52.381 0.00 0.00 0.00 3.18
4549 5505 6.866010 TGGAACAAAGGATATCATTCGATG 57.134 37.500 2.61 1.12 31.92 3.84
4550 5506 6.591001 TGGAACAAAGGATATCATTCGATGA 58.409 36.000 2.61 0.00 38.80 2.92
4551 5507 7.053498 TGGAACAAAGGATATCATTCGATGAA 58.947 34.615 2.61 0.00 38.10 2.57
4552 5508 7.555914 TGGAACAAAGGATATCATTCGATGAAA 59.444 33.333 2.61 0.00 38.10 2.69
4553 5509 8.405531 GGAACAAAGGATATCATTCGATGAAAA 58.594 33.333 2.61 0.00 43.50 2.29
4554 5510 9.956720 GAACAAAGGATATCATTCGATGAAAAT 57.043 29.630 2.61 0.00 43.50 1.82
4556 5512 9.956720 ACAAAGGATATCATTCGATGAAAATTC 57.043 29.630 2.61 0.00 43.50 2.17
4557 5513 9.955208 CAAAGGATATCATTCGATGAAAATTCA 57.045 29.630 2.61 0.00 43.50 2.57
4558 5514 9.956720 AAAGGATATCATTCGATGAAAATTCAC 57.043 29.630 2.61 0.00 43.50 3.18
4559 5515 8.915057 AGGATATCATTCGATGAAAATTCACT 57.085 30.769 4.83 0.00 43.50 3.41
4560 5516 8.781196 AGGATATCATTCGATGAAAATTCACTG 58.219 33.333 4.83 0.00 43.50 3.66
4561 5517 7.536622 GGATATCATTCGATGAAAATTCACTGC 59.463 37.037 4.83 0.00 43.50 4.40
4562 5518 4.650985 TCATTCGATGAAAATTCACTGCG 58.349 39.130 0.00 3.72 40.49 5.18
4563 5519 4.391523 TCATTCGATGAAAATTCACTGCGA 59.608 37.500 11.20 11.20 40.49 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 278 2.203139 CGTGGTTGAGTGGTGGCA 60.203 61.111 0.00 0.00 0.00 4.92
152 395 1.745489 GTGCCCACGGGAGATTGTC 60.745 63.158 6.21 0.00 37.50 3.18
155 398 0.325296 TAGAGTGCCCACGGGAGATT 60.325 55.000 6.21 0.00 37.50 2.40
163 406 1.301677 GCTTGCAGTAGAGTGCCCAC 61.302 60.000 6.87 0.00 43.28 4.61
165 408 1.746991 GGCTTGCAGTAGAGTGCCC 60.747 63.158 6.87 0.00 43.28 5.36
173 416 0.328258 GGAGAAAGGGGCTTGCAGTA 59.672 55.000 0.00 0.00 0.00 2.74
174 417 1.075659 GGAGAAAGGGGCTTGCAGT 59.924 57.895 0.00 0.00 0.00 4.40
179 422 0.478589 AGGGAAGGAGAAAGGGGCTT 60.479 55.000 0.00 0.00 0.00 4.35
203 446 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
204 447 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
205 448 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
206 449 3.309296 GGGAGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
207 450 2.370189 GGGGAGAGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
208 451 2.408565 GGGGAGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
211 454 0.535102 GCGGGGAGAGAGAGAGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
212 455 1.529796 GCGGGGAGAGAGAGAGAGA 59.470 63.158 0.00 0.00 0.00 3.10
214 457 2.598467 GGCGGGGAGAGAGAGAGA 59.402 66.667 0.00 0.00 0.00 3.10
395 642 5.453567 AGTTTTGCAACAAAGGTCCTATC 57.546 39.130 0.00 0.00 35.05 2.08
397 644 5.669164 AAAGTTTTGCAACAAAGGTCCTA 57.331 34.783 0.00 0.00 35.05 2.94
449 697 2.937469 CAACACAGGTCTTGTTGCAA 57.063 45.000 0.00 0.00 45.36 4.08
490 738 0.108138 GACCTAGCGCATTGAGTGGT 60.108 55.000 11.47 6.41 41.99 4.16
493 741 1.134965 GTCAGACCTAGCGCATTGAGT 60.135 52.381 11.47 0.00 0.00 3.41
497 745 1.141881 CCGTCAGACCTAGCGCATT 59.858 57.895 11.47 0.00 0.00 3.56
504 752 0.601558 GTTGTGAGCCGTCAGACCTA 59.398 55.000 0.00 0.00 31.53 3.08
507 755 1.668151 GGGTTGTGAGCCGTCAGAC 60.668 63.158 0.00 0.00 33.01 3.51
519 767 1.202879 TGATCTTTTCAGCCGGGTTGT 60.203 47.619 1.64 0.00 0.00 3.32
529 777 1.615116 CCCTGCCAGCTGATCTTTTCA 60.615 52.381 17.39 0.45 0.00 2.69
530 778 1.101331 CCCTGCCAGCTGATCTTTTC 58.899 55.000 17.39 0.00 0.00 2.29
531 779 0.324091 CCCCTGCCAGCTGATCTTTT 60.324 55.000 17.39 0.00 0.00 2.27
532 780 1.305623 CCCCTGCCAGCTGATCTTT 59.694 57.895 17.39 0.00 0.00 2.52
533 781 3.004951 CCCCTGCCAGCTGATCTT 58.995 61.111 17.39 0.00 0.00 2.40
534 782 3.806667 GCCCCTGCCAGCTGATCT 61.807 66.667 17.39 0.00 0.00 2.75
535 783 2.060567 TATGCCCCTGCCAGCTGATC 62.061 60.000 17.39 7.16 36.33 2.92
536 784 2.065470 CTATGCCCCTGCCAGCTGAT 62.065 60.000 17.39 0.00 36.33 2.90
537 785 2.691996 TATGCCCCTGCCAGCTGA 60.692 61.111 17.39 0.00 36.33 4.26
538 786 2.203308 CTATGCCCCTGCCAGCTG 60.203 66.667 6.78 6.78 36.33 4.24
539 787 4.201122 GCTATGCCCCTGCCAGCT 62.201 66.667 0.00 0.00 39.92 4.24
540 788 4.511246 TGCTATGCCCCTGCCAGC 62.511 66.667 0.00 0.00 42.10 4.85
541 789 2.203308 CTGCTATGCCCCTGCCAG 60.203 66.667 0.00 0.00 36.33 4.85
542 790 3.812544 CCTGCTATGCCCCTGCCA 61.813 66.667 0.00 0.00 36.33 4.92
550 798 0.830648 TATATCCGGGCCTGCTATGC 59.169 55.000 5.85 0.00 0.00 3.14
551 799 2.700371 TGATATATCCGGGCCTGCTATG 59.300 50.000 5.85 0.00 0.00 2.23
552 800 3.046283 TGATATATCCGGGCCTGCTAT 57.954 47.619 5.85 8.03 0.00 2.97
553 801 2.543037 TGATATATCCGGGCCTGCTA 57.457 50.000 5.85 0.00 0.00 3.49
554 802 1.885049 ATGATATATCCGGGCCTGCT 58.115 50.000 5.85 0.00 0.00 4.24
555 803 2.717639 AATGATATATCCGGGCCTGC 57.282 50.000 5.85 0.00 0.00 4.85
556 804 4.895889 TCTCTAATGATATATCCGGGCCTG 59.104 45.833 3.88 3.88 0.00 4.85
557 805 5.144159 TCTCTAATGATATATCCGGGCCT 57.856 43.478 10.25 0.00 0.00 5.19
558 806 5.598830 TCTTCTCTAATGATATATCCGGGCC 59.401 44.000 10.25 0.00 0.00 5.80
559 807 6.716934 TCTTCTCTAATGATATATCCGGGC 57.283 41.667 10.25 0.00 0.00 6.13
560 808 8.972127 TCTTTCTTCTCTAATGATATATCCGGG 58.028 37.037 10.25 0.00 0.00 5.73
602 855 3.070018 ACATGACTTTTTCTCTCCTGCG 58.930 45.455 0.00 0.00 0.00 5.18
625 878 4.433615 TCAATAATCTTGCCTCTCGTCAC 58.566 43.478 0.00 0.00 0.00 3.67
633 886 4.878397 CGAAAGACCTCAATAATCTTGCCT 59.122 41.667 0.00 0.00 33.01 4.75
655 908 3.150767 TGAACACAATTTTCCTACCCCG 58.849 45.455 0.00 0.00 0.00 5.73
656 909 4.022329 CACTGAACACAATTTTCCTACCCC 60.022 45.833 0.00 0.00 0.00 4.95
679 932 2.490903 ACATTCACTGATTGGCTCAAGC 59.509 45.455 6.02 0.00 41.14 4.01
735 989 4.351192 ACAGTCATTTGTTTCTTGAACGC 58.649 39.130 0.00 0.00 41.29 4.84
773 1027 1.396301 GCTGATGAACGGCTTCTTCTG 59.604 52.381 0.00 11.22 46.39 3.02
789 1043 3.496884 GGTGACAATTCGTTTACTGCTGA 59.503 43.478 0.00 0.00 0.00 4.26
790 1044 3.364964 GGGTGACAATTCGTTTACTGCTG 60.365 47.826 0.00 0.00 0.00 4.41
791 1045 2.812011 GGGTGACAATTCGTTTACTGCT 59.188 45.455 0.00 0.00 0.00 4.24
799 1053 1.628340 TGATCCAGGGTGACAATTCGT 59.372 47.619 0.00 0.00 0.00 3.85
802 1056 4.598036 AATCTGATCCAGGGTGACAATT 57.402 40.909 0.00 0.00 31.51 2.32
806 1060 2.239654 TCCAAATCTGATCCAGGGTGAC 59.760 50.000 0.00 0.00 31.51 3.67
913 1187 4.247380 GAGGGCGATGGGGAGCTG 62.247 72.222 0.00 0.00 0.00 4.24
1026 1316 1.877443 GAGAGCACGTAGGAGAGGATC 59.123 57.143 0.00 0.00 0.00 3.36
1694 1984 7.934855 AATCTAAAGATATGGGATGACATGC 57.065 36.000 0.00 0.00 33.73 4.06
1714 2004 8.938883 TGGGCTCTAAATAAACAGATCTAATCT 58.061 33.333 0.00 0.00 41.15 2.40
1715 2005 9.732130 ATGGGCTCTAAATAAACAGATCTAATC 57.268 33.333 0.00 0.00 0.00 1.75
1716 2006 9.512588 CATGGGCTCTAAATAAACAGATCTAAT 57.487 33.333 0.00 0.00 0.00 1.73
1754 2044 5.316167 TGGCTCATCCATGAATATGTTACC 58.684 41.667 0.00 0.53 40.72 2.85
1827 2124 2.253758 GCGCTCACAGTGGCAGAAA 61.254 57.895 0.00 0.00 0.00 2.52
1851 2148 1.001406 CTCAGTCCGAAAAGACAGCCT 59.999 52.381 0.00 0.00 39.34 4.58
1852 2149 1.270358 ACTCAGTCCGAAAAGACAGCC 60.270 52.381 0.00 0.00 39.34 4.85
1855 2152 2.036387 TCCACTCAGTCCGAAAAGACA 58.964 47.619 0.00 0.00 39.34 3.41
1856 2153 2.814280 TCCACTCAGTCCGAAAAGAC 57.186 50.000 0.00 0.00 37.01 3.01
1857 2154 2.612972 GCATCCACTCAGTCCGAAAAGA 60.613 50.000 0.00 0.00 0.00 2.52
1858 2155 1.734465 GCATCCACTCAGTCCGAAAAG 59.266 52.381 0.00 0.00 0.00 2.27
1859 2156 1.347707 AGCATCCACTCAGTCCGAAAA 59.652 47.619 0.00 0.00 0.00 2.29
1861 2158 0.976641 AAGCATCCACTCAGTCCGAA 59.023 50.000 0.00 0.00 0.00 4.30
1863 2160 0.803768 CGAAGCATCCACTCAGTCCG 60.804 60.000 0.00 0.00 0.00 4.79
1890 2187 7.985184 TCAGTACCCAAACTATTTAGCACATAG 59.015 37.037 0.00 0.00 0.00 2.23
1892 2189 6.717289 TCAGTACCCAAACTATTTAGCACAT 58.283 36.000 0.00 0.00 0.00 3.21
1920 2217 7.129457 TCACAAATCTAGCATCCTTACTGAT 57.871 36.000 0.00 0.00 0.00 2.90
1957 2254 1.202582 CAGACCCACTCTTCGTACCAG 59.797 57.143 0.00 0.00 0.00 4.00
1967 2264 4.208746 AGTGCTAGTATACAGACCCACTC 58.791 47.826 5.50 0.00 0.00 3.51
2027 2324 9.330063 TCTGCCAAAATAATAGAATACAGACTG 57.670 33.333 0.00 0.00 0.00 3.51
2101 2405 7.722949 TTAGCATTTTCTCCATCCAAATTCT 57.277 32.000 0.00 0.00 0.00 2.40
2158 2696 4.405358 ACCAAAGCATCCTTTCAGAAACAA 59.595 37.500 0.00 0.00 39.20 2.83
2164 2702 4.589216 TCAAACCAAAGCATCCTTTCAG 57.411 40.909 0.00 0.00 39.20 3.02
2167 2705 5.294734 ACAATCAAACCAAAGCATCCTTT 57.705 34.783 0.00 0.00 41.86 3.11
2168 2706 4.559300 CGACAATCAAACCAAAGCATCCTT 60.559 41.667 0.00 0.00 0.00 3.36
2169 2707 3.057315 CGACAATCAAACCAAAGCATCCT 60.057 43.478 0.00 0.00 0.00 3.24
2171 2709 2.663119 GCGACAATCAAACCAAAGCATC 59.337 45.455 0.00 0.00 0.00 3.91
2172 2710 2.297033 AGCGACAATCAAACCAAAGCAT 59.703 40.909 0.00 0.00 0.00 3.79
2173 2711 1.680735 AGCGACAATCAAACCAAAGCA 59.319 42.857 0.00 0.00 0.00 3.91
2342 2932 6.542370 TCGATGATTCTCCAAATTTCTAACCC 59.458 38.462 0.00 0.00 0.00 4.11
2380 2970 9.443283 CAGCAAGCAATATGAAAGTACTAATTC 57.557 33.333 0.00 0.00 0.00 2.17
2407 2997 8.687242 TCAGACATAAACATCTCTTACCAGTAG 58.313 37.037 0.00 0.00 0.00 2.57
2495 3085 8.348507 AGAAAATCAGCATTTTATAGCTAGCAC 58.651 33.333 18.83 0.00 41.47 4.40
2502 3092 9.013490 CCACGAAAGAAAATCAGCATTTTATAG 57.987 33.333 0.00 0.00 41.47 1.31
2525 3115 3.691609 CAGATCTGAGTTTTTAGGGCCAC 59.308 47.826 18.34 0.00 0.00 5.01
2746 3340 6.944290 ACATTCAGAATCTTCAGATTGGACAA 59.056 34.615 6.79 0.00 44.14 3.18
2999 3596 3.402110 AGATCGCAACTTGTTCATGTGA 58.598 40.909 0.00 0.00 37.90 3.58
3012 3609 5.479724 AGATAGATGATGGAAGAGATCGCAA 59.520 40.000 0.00 0.00 0.00 4.85
3057 3654 3.949754 TCATTGAAATGAGCATCCAGGAC 59.050 43.478 1.55 0.00 40.32 3.85
3083 3680 2.515523 GCAGATGGCAGACCGCAT 60.516 61.111 0.00 0.00 45.17 4.73
3407 4004 2.266372 CTCTCTGCTGCTGCTGCT 59.734 61.111 27.67 0.00 40.48 4.24
3470 4070 2.656069 CCCAACGTCCGAGACCCAT 61.656 63.158 0.00 0.00 0.00 4.00
3594 4194 8.905702 GTTCCGTAAACTTGGTATATACATACG 58.094 37.037 14.70 15.32 35.55 3.06
3638 4238 2.354510 CAGAGTCAACAGGAACGCAAAA 59.645 45.455 0.00 0.00 0.00 2.44
3643 4243 1.605712 GGTCCAGAGTCAACAGGAACG 60.606 57.143 0.00 0.00 0.00 3.95
3658 4258 0.250727 GCAGGTGCTTGTAAGGTCCA 60.251 55.000 0.00 0.00 38.21 4.02
3660 4260 0.960861 GGGCAGGTGCTTGTAAGGTC 60.961 60.000 1.26 0.00 41.70 3.85
3682 4292 0.965439 AATAAACGCCAAAGCCTGCA 59.035 45.000 0.00 0.00 34.57 4.41
3761 4375 8.603304 ACCGAGTTTCAGCCCTATTATTATTAT 58.397 33.333 0.00 0.00 0.00 1.28
3762 4376 7.970102 ACCGAGTTTCAGCCCTATTATTATTA 58.030 34.615 0.00 0.00 0.00 0.98
3819 4433 7.966246 TCAGCAAACAAAATGCATAATTTCT 57.034 28.000 0.00 0.00 46.22 2.52
3928 4542 2.814097 CGGGAATGACAGGGTTGAAGTT 60.814 50.000 0.00 0.00 0.00 2.66
3930 4544 1.003118 TCGGGAATGACAGGGTTGAAG 59.997 52.381 0.00 0.00 0.00 3.02
3931 4545 1.060729 TCGGGAATGACAGGGTTGAA 58.939 50.000 0.00 0.00 0.00 2.69
3932 4546 1.060729 TTCGGGAATGACAGGGTTGA 58.939 50.000 0.00 0.00 0.00 3.18
3933 4547 2.128771 ATTCGGGAATGACAGGGTTG 57.871 50.000 0.00 0.00 0.00 3.77
3943 4557 2.431782 CAAATTGAGGGCATTCGGGAAT 59.568 45.455 0.00 0.00 0.00 3.01
3944 4558 1.824230 CAAATTGAGGGCATTCGGGAA 59.176 47.619 0.00 0.00 0.00 3.97
3945 4559 1.272425 ACAAATTGAGGGCATTCGGGA 60.272 47.619 0.00 0.00 0.00 5.14
3946 4560 1.135024 CACAAATTGAGGGCATTCGGG 60.135 52.381 0.00 0.00 0.00 5.14
3947 4561 1.818060 TCACAAATTGAGGGCATTCGG 59.182 47.619 0.00 0.00 0.00 4.30
3948 4562 3.057315 ACTTCACAAATTGAGGGCATTCG 60.057 43.478 0.00 0.00 35.58 3.34
3949 4563 4.022068 TGACTTCACAAATTGAGGGCATTC 60.022 41.667 0.00 0.00 44.32 2.67
3950 4564 3.896888 TGACTTCACAAATTGAGGGCATT 59.103 39.130 0.00 0.00 44.32 3.56
3951 4565 3.499338 TGACTTCACAAATTGAGGGCAT 58.501 40.909 0.00 0.00 44.32 4.40
3952 4566 2.942804 TGACTTCACAAATTGAGGGCA 58.057 42.857 0.00 0.00 46.94 5.36
3953 4567 4.458989 TGTATGACTTCACAAATTGAGGGC 59.541 41.667 0.00 0.00 39.92 5.19
3954 4568 5.707298 ACTGTATGACTTCACAAATTGAGGG 59.293 40.000 0.00 0.00 35.58 4.30
3955 4569 6.808008 ACTGTATGACTTCACAAATTGAGG 57.192 37.500 0.00 0.00 37.34 3.86
3987 4628 4.619437 ACGTTTAGTTTTCAAAAGCCGA 57.381 36.364 0.00 0.00 0.00 5.54
3988 4629 5.504392 AGTACGTTTAGTTTTCAAAAGCCG 58.496 37.500 0.00 0.00 0.00 5.52
3990 4631 7.633621 AGGTAGTACGTTTAGTTTTCAAAAGC 58.366 34.615 0.00 0.00 0.00 3.51
4077 4720 7.518731 TGTTTTTGCATTGAACTACAAACTC 57.481 32.000 0.00 0.00 42.03 3.01
4111 4779 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
4112 4780 3.306613 AGGGAGTATTTAGGAACGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
4117 4785 5.672503 GGAACAGAGGGAGTATTTAGGAAC 58.327 45.833 0.00 0.00 0.00 3.62
4119 4787 3.958798 CGGAACAGAGGGAGTATTTAGGA 59.041 47.826 0.00 0.00 0.00 2.94
4122 4790 6.555463 AATTCGGAACAGAGGGAGTATTTA 57.445 37.500 0.00 0.00 0.00 1.40
4123 4791 5.437191 AATTCGGAACAGAGGGAGTATTT 57.563 39.130 0.00 0.00 0.00 1.40
4127 4795 3.442076 AGTAATTCGGAACAGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
4128 4796 4.184629 CAAGTAATTCGGAACAGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
4129 4797 3.581332 ACAAGTAATTCGGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
4130 4798 3.933332 GACAAGTAATTCGGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
4131 4799 3.612860 CGACAAGTAATTCGGAACAGAGG 59.387 47.826 0.00 0.00 0.00 3.69
4133 4801 4.247267 ACGACAAGTAATTCGGAACAGA 57.753 40.909 0.00 0.00 39.63 3.41
4134 4802 4.561606 CCTACGACAAGTAATTCGGAACAG 59.438 45.833 0.00 0.00 39.63 3.16
4136 4804 4.488879 ACCTACGACAAGTAATTCGGAAC 58.511 43.478 0.00 0.00 39.63 3.62
4137 4805 4.789012 ACCTACGACAAGTAATTCGGAA 57.211 40.909 0.00 0.00 39.63 4.30
4139 4807 4.980434 CCATACCTACGACAAGTAATTCGG 59.020 45.833 0.00 0.00 39.63 4.30
4140 4808 5.824429 TCCATACCTACGACAAGTAATTCG 58.176 41.667 0.00 0.00 41.14 3.34
4142 4810 7.120923 ACATCCATACCTACGACAAGTAATT 57.879 36.000 0.00 0.00 34.45 1.40
4143 4811 6.726490 ACATCCATACCTACGACAAGTAAT 57.274 37.500 0.00 0.00 34.45 1.89
4144 4812 7.828508 ATACATCCATACCTACGACAAGTAA 57.171 36.000 0.00 0.00 34.45 2.24
4145 4813 7.828508 AATACATCCATACCTACGACAAGTA 57.171 36.000 0.00 0.00 0.00 2.24
4146 4814 6.726490 AATACATCCATACCTACGACAAGT 57.274 37.500 0.00 0.00 0.00 3.16
4147 4815 8.573885 TCTAAATACATCCATACCTACGACAAG 58.426 37.037 0.00 0.00 0.00 3.16
4148 4816 8.467963 TCTAAATACATCCATACCTACGACAA 57.532 34.615 0.00 0.00 0.00 3.18
4149 4817 8.520351 CATCTAAATACATCCATACCTACGACA 58.480 37.037 0.00 0.00 0.00 4.35
4150 4818 8.521176 ACATCTAAATACATCCATACCTACGAC 58.479 37.037 0.00 0.00 0.00 4.34
4151 4819 8.645814 ACATCTAAATACATCCATACCTACGA 57.354 34.615 0.00 0.00 0.00 3.43
4179 4847 9.554395 TCGCAAAAATGGATGTATCTAGATAAA 57.446 29.630 14.09 9.59 0.00 1.40
4180 4848 8.988934 GTCGCAAAAATGGATGTATCTAGATAA 58.011 33.333 14.09 5.70 0.00 1.75
4181 4849 7.328493 CGTCGCAAAAATGGATGTATCTAGATA 59.672 37.037 8.44 8.44 0.00 1.98
4182 4850 6.146184 CGTCGCAAAAATGGATGTATCTAGAT 59.854 38.462 10.73 10.73 0.00 1.98
4183 4851 5.462068 CGTCGCAAAAATGGATGTATCTAGA 59.538 40.000 0.00 0.00 0.00 2.43
4184 4852 5.462068 TCGTCGCAAAAATGGATGTATCTAG 59.538 40.000 0.00 0.00 0.00 2.43
4185 4853 5.353111 TCGTCGCAAAAATGGATGTATCTA 58.647 37.500 0.00 0.00 0.00 1.98
4186 4854 4.188462 TCGTCGCAAAAATGGATGTATCT 58.812 39.130 0.00 0.00 0.00 1.98
4187 4855 4.034048 ACTCGTCGCAAAAATGGATGTATC 59.966 41.667 0.00 0.00 0.00 2.24
4188 4856 3.938963 ACTCGTCGCAAAAATGGATGTAT 59.061 39.130 0.00 0.00 0.00 2.29
4189 4857 3.331150 ACTCGTCGCAAAAATGGATGTA 58.669 40.909 0.00 0.00 0.00 2.29
4190 4858 2.151202 ACTCGTCGCAAAAATGGATGT 58.849 42.857 0.00 0.00 0.00 3.06
4191 4859 2.900122 ACTCGTCGCAAAAATGGATG 57.100 45.000 0.00 0.00 0.00 3.51
4192 4860 5.560966 AATTACTCGTCGCAAAAATGGAT 57.439 34.783 0.00 0.00 0.00 3.41
4193 4861 5.150683 CAAATTACTCGTCGCAAAAATGGA 58.849 37.500 0.00 0.00 0.00 3.41
4194 4862 4.323336 CCAAATTACTCGTCGCAAAAATGG 59.677 41.667 0.00 0.00 0.00 3.16
4195 4863 5.150683 TCCAAATTACTCGTCGCAAAAATG 58.849 37.500 0.00 0.00 0.00 2.32
4196 4864 5.365403 TCCAAATTACTCGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
4197 4865 4.815040 TCCAAATTACTCGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
4198 4866 4.529446 GTTCCAAATTACTCGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
4199 4867 3.363182 CGTTCCAAATTACTCGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
4200 4868 2.156117 CGTTCCAAATTACTCGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
4201 4869 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
4202 4870 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
4203 4871 2.598589 TCCGTTCCAAATTACTCGTCG 58.401 47.619 0.00 0.00 0.00 5.12
4204 4872 3.308866 CCATCCGTTCCAAATTACTCGTC 59.691 47.826 0.00 0.00 0.00 4.20
4205 4873 3.055675 TCCATCCGTTCCAAATTACTCGT 60.056 43.478 0.00 0.00 0.00 4.18
4206 4874 3.527533 TCCATCCGTTCCAAATTACTCG 58.472 45.455 0.00 0.00 0.00 4.18
4207 4875 4.514401 ACTCCATCCGTTCCAAATTACTC 58.486 43.478 0.00 0.00 0.00 2.59
4208 4876 4.569719 ACTCCATCCGTTCCAAATTACT 57.430 40.909 0.00 0.00 0.00 2.24
4209 4877 7.713942 ACTTATACTCCATCCGTTCCAAATTAC 59.286 37.037 0.00 0.00 0.00 1.89
4210 4878 7.798071 ACTTATACTCCATCCGTTCCAAATTA 58.202 34.615 0.00 0.00 0.00 1.40
4211 4879 6.659824 ACTTATACTCCATCCGTTCCAAATT 58.340 36.000 0.00 0.00 0.00 1.82
4212 4880 6.099845 AGACTTATACTCCATCCGTTCCAAAT 59.900 38.462 0.00 0.00 0.00 2.32
4213 4881 5.424252 AGACTTATACTCCATCCGTTCCAAA 59.576 40.000 0.00 0.00 0.00 3.28
4214 4882 4.960469 AGACTTATACTCCATCCGTTCCAA 59.040 41.667 0.00 0.00 0.00 3.53
4215 4883 4.543689 AGACTTATACTCCATCCGTTCCA 58.456 43.478 0.00 0.00 0.00 3.53
4216 4884 5.302313 AGAAGACTTATACTCCATCCGTTCC 59.698 44.000 0.00 0.00 0.00 3.62
4217 4885 6.394025 AGAAGACTTATACTCCATCCGTTC 57.606 41.667 0.00 0.00 0.00 3.95
4218 4886 6.793505 AAGAAGACTTATACTCCATCCGTT 57.206 37.500 0.00 0.00 34.28 4.44
4219 4887 7.288560 TCTAAGAAGACTTATACTCCATCCGT 58.711 38.462 0.00 0.00 37.85 4.69
4220 4888 7.747155 TCTAAGAAGACTTATACTCCATCCG 57.253 40.000 0.00 0.00 37.85 4.18
4239 4907 8.081633 TGCTGTTGTCCATTTAAAATGTCTAAG 58.918 33.333 0.00 0.00 0.00 2.18
4242 4910 6.403866 TGCTGTTGTCCATTTAAAATGTCT 57.596 33.333 0.00 0.00 0.00 3.41
4247 4915 5.473846 TCCGTATGCTGTTGTCCATTTAAAA 59.526 36.000 0.00 0.00 0.00 1.52
4249 4917 4.580868 TCCGTATGCTGTTGTCCATTTAA 58.419 39.130 0.00 0.00 0.00 1.52
4250 4918 4.209307 TCCGTATGCTGTTGTCCATTTA 57.791 40.909 0.00 0.00 0.00 1.40
4252 4920 2.779755 TCCGTATGCTGTTGTCCATT 57.220 45.000 0.00 0.00 0.00 3.16
4255 4923 2.024176 ACATCCGTATGCTGTTGTCC 57.976 50.000 0.00 0.00 36.50 4.02
4266 4934 7.935210 TGAATCTACACTCTACATACATCCGTA 59.065 37.037 0.00 0.00 0.00 4.02
4267 4935 6.771267 TGAATCTACACTCTACATACATCCGT 59.229 38.462 0.00 0.00 0.00 4.69
4268 4936 7.203255 TGAATCTACACTCTACATACATCCG 57.797 40.000 0.00 0.00 0.00 4.18
4277 4945 8.887717 AGCAAAATGAATGAATCTACACTCTAC 58.112 33.333 0.00 0.00 0.00 2.59
4278 4946 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
4279 4947 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
4280 4948 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
4281 4949 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
4282 4950 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
4283 4951 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
4284 4952 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
4285 4953 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
4287 4955 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
4288 4956 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
4289 4957 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
4290 4958 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
4291 4959 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
4292 4960 7.769044 AGTAACTACATACGGAGCAAAATGAAT 59.231 33.333 0.00 0.00 0.00 2.57
4293 4961 7.101054 AGTAACTACATACGGAGCAAAATGAA 58.899 34.615 0.00 0.00 0.00 2.57
4295 4963 6.903883 AGTAACTACATACGGAGCAAAATG 57.096 37.500 0.00 0.00 0.00 2.32
4297 4965 6.225318 ACAAGTAACTACATACGGAGCAAAA 58.775 36.000 0.00 0.00 0.00 2.44
4298 4966 5.786311 ACAAGTAACTACATACGGAGCAAA 58.214 37.500 0.00 0.00 0.00 3.68
4299 4967 5.395682 ACAAGTAACTACATACGGAGCAA 57.604 39.130 0.00 0.00 0.00 3.91
4300 4968 5.047872 TCAACAAGTAACTACATACGGAGCA 60.048 40.000 0.00 0.00 0.00 4.26
4301 4969 5.404946 TCAACAAGTAACTACATACGGAGC 58.595 41.667 0.00 0.00 0.00 4.70
4302 4970 7.878477 TTTCAACAAGTAACTACATACGGAG 57.122 36.000 0.00 0.00 0.00 4.63
4303 4971 8.308931 AGATTTCAACAAGTAACTACATACGGA 58.691 33.333 0.00 0.00 0.00 4.69
4304 4972 8.475331 AGATTTCAACAAGTAACTACATACGG 57.525 34.615 0.00 0.00 0.00 4.02
4305 4973 9.355215 AGAGATTTCAACAAGTAACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
4312 4980 9.495572 CCTTTCTAGAGATTTCAACAAGTAACT 57.504 33.333 0.00 0.00 0.00 2.24
4313 4981 8.231161 GCCTTTCTAGAGATTTCAACAAGTAAC 58.769 37.037 0.00 0.00 0.00 2.50
4315 4983 7.680730 AGCCTTTCTAGAGATTTCAACAAGTA 58.319 34.615 0.00 0.00 0.00 2.24
4322 4990 8.950210 CAAATACAAGCCTTTCTAGAGATTTCA 58.050 33.333 0.00 0.00 0.00 2.69
4323 4991 9.167311 TCAAATACAAGCCTTTCTAGAGATTTC 57.833 33.333 0.00 0.00 0.00 2.17
4324 4992 9.171877 CTCAAATACAAGCCTTTCTAGAGATTT 57.828 33.333 0.00 0.00 0.00 2.17
4325 4993 8.543774 TCTCAAATACAAGCCTTTCTAGAGATT 58.456 33.333 0.00 0.00 0.00 2.40
4326 4994 8.083828 TCTCAAATACAAGCCTTTCTAGAGAT 57.916 34.615 0.00 0.00 0.00 2.75
4328 4996 7.201478 CGTTCTCAAATACAAGCCTTTCTAGAG 60.201 40.741 0.00 0.00 0.00 2.43
4329 4997 6.590292 CGTTCTCAAATACAAGCCTTTCTAGA 59.410 38.462 0.00 0.00 0.00 2.43
4330 4998 6.183360 CCGTTCTCAAATACAAGCCTTTCTAG 60.183 42.308 0.00 0.00 0.00 2.43
4331 4999 5.642063 CCGTTCTCAAATACAAGCCTTTCTA 59.358 40.000 0.00 0.00 0.00 2.10
4332 5000 4.455877 CCGTTCTCAAATACAAGCCTTTCT 59.544 41.667 0.00 0.00 0.00 2.52
4333 5001 4.454504 TCCGTTCTCAAATACAAGCCTTTC 59.545 41.667 0.00 0.00 0.00 2.62
4334 5002 4.394729 TCCGTTCTCAAATACAAGCCTTT 58.605 39.130 0.00 0.00 0.00 3.11
4335 5003 4.003648 CTCCGTTCTCAAATACAAGCCTT 58.996 43.478 0.00 0.00 0.00 4.35
4336 5004 3.600388 CTCCGTTCTCAAATACAAGCCT 58.400 45.455 0.00 0.00 0.00 4.58
4337 5005 2.678336 CCTCCGTTCTCAAATACAAGCC 59.322 50.000 0.00 0.00 0.00 4.35
4338 5006 2.678336 CCCTCCGTTCTCAAATACAAGC 59.322 50.000 0.00 0.00 0.00 4.01
4339 5007 4.184629 CTCCCTCCGTTCTCAAATACAAG 58.815 47.826 0.00 0.00 0.00 3.16
4340 5008 3.581332 ACTCCCTCCGTTCTCAAATACAA 59.419 43.478 0.00 0.00 0.00 2.41
4342 5010 3.889520 ACTCCCTCCGTTCTCAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
4343 5011 6.346096 CAATTACTCCCTCCGTTCTCAAATA 58.654 40.000 0.00 0.00 0.00 1.40
4345 5013 4.575885 CAATTACTCCCTCCGTTCTCAAA 58.424 43.478 0.00 0.00 0.00 2.69
4346 5014 3.618997 GCAATTACTCCCTCCGTTCTCAA 60.619 47.826 0.00 0.00 0.00 3.02
4347 5015 2.093658 GCAATTACTCCCTCCGTTCTCA 60.094 50.000 0.00 0.00 0.00 3.27
4348 5016 2.168728 AGCAATTACTCCCTCCGTTCTC 59.831 50.000 0.00 0.00 0.00 2.87
4350 5018 2.693267 AGCAATTACTCCCTCCGTTC 57.307 50.000 0.00 0.00 0.00 3.95
4353 5021 2.698797 TCCTAAGCAATTACTCCCTCCG 59.301 50.000 0.00 0.00 0.00 4.63
4355 5023 5.099042 TGTTCCTAAGCAATTACTCCCTC 57.901 43.478 0.00 0.00 0.00 4.30
4356 5024 5.222048 TGTTGTTCCTAAGCAATTACTCCCT 60.222 40.000 0.00 0.00 0.00 4.20
4357 5025 5.007682 TGTTGTTCCTAAGCAATTACTCCC 58.992 41.667 0.00 0.00 0.00 4.30
4358 5026 6.206829 AGTTGTTGTTCCTAAGCAATTACTCC 59.793 38.462 0.00 0.00 0.00 3.85
4359 5027 7.203255 AGTTGTTGTTCCTAAGCAATTACTC 57.797 36.000 0.00 0.00 0.00 2.59
4361 5029 6.577427 CGAAGTTGTTGTTCCTAAGCAATTAC 59.423 38.462 0.00 0.00 0.00 1.89
4395 5351 1.442769 ATTCGTGTGATGCAGGTCAC 58.557 50.000 12.58 12.58 46.75 3.67
4400 5356 1.358877 TCGGAATTCGTGTGATGCAG 58.641 50.000 0.00 0.00 40.32 4.41
4429 5385 5.374080 CGTGTCACAAGCATTACAGTTTAG 58.626 41.667 3.42 0.00 0.00 1.85
4445 5401 2.015736 ATGAGAGGAATGCGTGTCAC 57.984 50.000 0.00 0.00 35.43 3.67
4446 5402 2.621338 GAATGAGAGGAATGCGTGTCA 58.379 47.619 0.00 0.00 36.75 3.58
4447 5403 1.936547 GGAATGAGAGGAATGCGTGTC 59.063 52.381 0.00 0.00 0.00 3.67
4448 5404 1.278985 TGGAATGAGAGGAATGCGTGT 59.721 47.619 0.00 0.00 0.00 4.49
4449 5405 2.028420 TGGAATGAGAGGAATGCGTG 57.972 50.000 0.00 0.00 0.00 5.34
4450 5406 2.787473 TTGGAATGAGAGGAATGCGT 57.213 45.000 0.00 0.00 0.00 5.24
4451 5407 3.012518 ACTTTGGAATGAGAGGAATGCG 58.987 45.455 0.00 0.00 0.00 4.73
4452 5408 3.428589 GCACTTTGGAATGAGAGGAATGC 60.429 47.826 0.00 0.00 0.00 3.56
4453 5409 3.129988 GGCACTTTGGAATGAGAGGAATG 59.870 47.826 0.00 0.00 0.00 2.67
4454 5410 3.359950 GGCACTTTGGAATGAGAGGAAT 58.640 45.455 0.00 0.00 0.00 3.01
4455 5411 2.555227 GGGCACTTTGGAATGAGAGGAA 60.555 50.000 0.00 0.00 0.00 3.36
4456 5412 1.004745 GGGCACTTTGGAATGAGAGGA 59.995 52.381 0.00 0.00 0.00 3.71
4457 5413 1.272092 TGGGCACTTTGGAATGAGAGG 60.272 52.381 0.00 0.00 0.00 3.69
4458 5414 2.205022 TGGGCACTTTGGAATGAGAG 57.795 50.000 0.00 0.00 0.00 3.20
4459 5415 2.238521 GTTGGGCACTTTGGAATGAGA 58.761 47.619 0.00 0.00 0.00 3.27
4460 5416 1.962807 TGTTGGGCACTTTGGAATGAG 59.037 47.619 0.00 0.00 0.00 2.90
4461 5417 1.962807 CTGTTGGGCACTTTGGAATGA 59.037 47.619 0.00 0.00 0.00 2.57
4462 5418 1.962807 TCTGTTGGGCACTTTGGAATG 59.037 47.619 0.00 0.00 0.00 2.67
4463 5419 1.963515 GTCTGTTGGGCACTTTGGAAT 59.036 47.619 0.00 0.00 0.00 3.01
4464 5420 1.064017 AGTCTGTTGGGCACTTTGGAA 60.064 47.619 0.00 0.00 0.00 3.53
4465 5421 0.550914 AGTCTGTTGGGCACTTTGGA 59.449 50.000 0.00 0.00 0.00 3.53
4466 5422 2.270352 TAGTCTGTTGGGCACTTTGG 57.730 50.000 0.00 0.00 0.00 3.28
4467 5423 2.948979 TGTTAGTCTGTTGGGCACTTTG 59.051 45.455 0.00 0.00 0.00 2.77
4468 5424 3.290948 TGTTAGTCTGTTGGGCACTTT 57.709 42.857 0.00 0.00 0.00 2.66
4469 5425 2.949644 GTTGTTAGTCTGTTGGGCACTT 59.050 45.455 0.00 0.00 0.00 3.16
4470 5426 2.172717 AGTTGTTAGTCTGTTGGGCACT 59.827 45.455 0.00 0.00 0.00 4.40
4471 5427 2.572290 AGTTGTTAGTCTGTTGGGCAC 58.428 47.619 0.00 0.00 0.00 5.01
4472 5428 3.290948 AAGTTGTTAGTCTGTTGGGCA 57.709 42.857 0.00 0.00 0.00 5.36
4473 5429 4.156008 CCATAAGTTGTTAGTCTGTTGGGC 59.844 45.833 0.00 0.00 0.00 5.36
4474 5430 5.411669 GTCCATAAGTTGTTAGTCTGTTGGG 59.588 44.000 0.00 0.00 0.00 4.12
4475 5431 5.411669 GGTCCATAAGTTGTTAGTCTGTTGG 59.588 44.000 0.00 0.00 0.00 3.77
4476 5432 5.995282 TGGTCCATAAGTTGTTAGTCTGTTG 59.005 40.000 0.00 0.00 0.00 3.33
4477 5433 6.182507 TGGTCCATAAGTTGTTAGTCTGTT 57.817 37.500 0.00 0.00 0.00 3.16
4478 5434 5.818678 TGGTCCATAAGTTGTTAGTCTGT 57.181 39.130 0.00 0.00 0.00 3.41
4479 5435 5.643777 CCTTGGTCCATAAGTTGTTAGTCTG 59.356 44.000 0.00 0.00 0.00 3.51
4480 5436 5.309806 ACCTTGGTCCATAAGTTGTTAGTCT 59.690 40.000 0.00 0.00 0.00 3.24
4481 5437 5.557866 ACCTTGGTCCATAAGTTGTTAGTC 58.442 41.667 0.00 0.00 0.00 2.59
4482 5438 5.578157 ACCTTGGTCCATAAGTTGTTAGT 57.422 39.130 0.00 0.00 0.00 2.24
4483 5439 6.001460 TGAACCTTGGTCCATAAGTTGTTAG 58.999 40.000 6.45 0.00 0.00 2.34
4484 5440 5.942961 TGAACCTTGGTCCATAAGTTGTTA 58.057 37.500 6.45 0.00 0.00 2.41
4485 5441 4.798882 TGAACCTTGGTCCATAAGTTGTT 58.201 39.130 6.45 0.00 0.00 2.83
4486 5442 4.398319 CTGAACCTTGGTCCATAAGTTGT 58.602 43.478 6.45 0.00 0.00 3.32
4487 5443 3.758554 CCTGAACCTTGGTCCATAAGTTG 59.241 47.826 6.45 0.00 0.00 3.16
4488 5444 3.655777 TCCTGAACCTTGGTCCATAAGTT 59.344 43.478 0.00 0.00 0.00 2.66
4489 5445 3.256704 TCCTGAACCTTGGTCCATAAGT 58.743 45.455 0.00 0.00 0.00 2.24
4490 5446 3.370953 CCTCCTGAACCTTGGTCCATAAG 60.371 52.174 0.00 0.00 0.00 1.73
4491 5447 2.576191 CCTCCTGAACCTTGGTCCATAA 59.424 50.000 0.00 0.00 0.00 1.90
4492 5448 2.196595 CCTCCTGAACCTTGGTCCATA 58.803 52.381 0.00 0.00 0.00 2.74
4493 5449 0.995024 CCTCCTGAACCTTGGTCCAT 59.005 55.000 0.00 0.00 0.00 3.41
4494 5450 0.401395 ACCTCCTGAACCTTGGTCCA 60.401 55.000 0.00 0.00 0.00 4.02
4495 5451 0.036875 CACCTCCTGAACCTTGGTCC 59.963 60.000 0.00 0.00 0.00 4.46
4496 5452 0.036875 CCACCTCCTGAACCTTGGTC 59.963 60.000 0.00 0.00 0.00 4.02
4497 5453 0.401395 TCCACCTCCTGAACCTTGGT 60.401 55.000 0.00 0.00 0.00 3.67
4498 5454 0.326264 CTCCACCTCCTGAACCTTGG 59.674 60.000 0.00 0.00 0.00 3.61
4499 5455 0.322008 GCTCCACCTCCTGAACCTTG 60.322 60.000 0.00 0.00 0.00 3.61
4500 5456 0.474660 AGCTCCACCTCCTGAACCTT 60.475 55.000 0.00 0.00 0.00 3.50
4501 5457 0.413832 TAGCTCCACCTCCTGAACCT 59.586 55.000 0.00 0.00 0.00 3.50
4502 5458 0.827368 CTAGCTCCACCTCCTGAACC 59.173 60.000 0.00 0.00 0.00 3.62
4503 5459 1.205893 CACTAGCTCCACCTCCTGAAC 59.794 57.143 0.00 0.00 0.00 3.18
4504 5460 1.561643 CACTAGCTCCACCTCCTGAA 58.438 55.000 0.00 0.00 0.00 3.02
4505 5461 0.324738 CCACTAGCTCCACCTCCTGA 60.325 60.000 0.00 0.00 0.00 3.86
4506 5462 0.616111 ACCACTAGCTCCACCTCCTG 60.616 60.000 0.00 0.00 0.00 3.86
4507 5463 0.117340 AACCACTAGCTCCACCTCCT 59.883 55.000 0.00 0.00 0.00 3.69
4508 5464 0.250513 CAACCACTAGCTCCACCTCC 59.749 60.000 0.00 0.00 0.00 4.30
4509 5465 0.250513 CCAACCACTAGCTCCACCTC 59.749 60.000 0.00 0.00 0.00 3.85
4510 5466 0.178903 TCCAACCACTAGCTCCACCT 60.179 55.000 0.00 0.00 0.00 4.00
4511 5467 0.690762 TTCCAACCACTAGCTCCACC 59.309 55.000 0.00 0.00 0.00 4.61
4512 5468 1.071699 TGTTCCAACCACTAGCTCCAC 59.928 52.381 0.00 0.00 0.00 4.02
4513 5469 1.429930 TGTTCCAACCACTAGCTCCA 58.570 50.000 0.00 0.00 0.00 3.86
4514 5470 2.561478 TTGTTCCAACCACTAGCTCC 57.439 50.000 0.00 0.00 0.00 4.70
4515 5471 2.814336 CCTTTGTTCCAACCACTAGCTC 59.186 50.000 0.00 0.00 0.00 4.09
4516 5472 2.441750 TCCTTTGTTCCAACCACTAGCT 59.558 45.455 0.00 0.00 0.00 3.32
4517 5473 2.858745 TCCTTTGTTCCAACCACTAGC 58.141 47.619 0.00 0.00 0.00 3.42
4518 5474 6.414732 TGATATCCTTTGTTCCAACCACTAG 58.585 40.000 0.00 0.00 0.00 2.57
4519 5475 6.381498 TGATATCCTTTGTTCCAACCACTA 57.619 37.500 0.00 0.00 0.00 2.74
4520 5476 5.255397 TGATATCCTTTGTTCCAACCACT 57.745 39.130 0.00 0.00 0.00 4.00
4521 5477 6.530019 AATGATATCCTTTGTTCCAACCAC 57.470 37.500 0.00 0.00 0.00 4.16
4522 5478 5.356751 CGAATGATATCCTTTGTTCCAACCA 59.643 40.000 0.00 0.00 0.00 3.67
4523 5479 5.588648 TCGAATGATATCCTTTGTTCCAACC 59.411 40.000 0.00 0.00 0.00 3.77
4524 5480 6.677781 TCGAATGATATCCTTTGTTCCAAC 57.322 37.500 0.00 0.00 0.00 3.77
4525 5481 7.053498 TCATCGAATGATATCCTTTGTTCCAA 58.947 34.615 0.00 0.00 33.59 3.53
4526 5482 6.591001 TCATCGAATGATATCCTTTGTTCCA 58.409 36.000 0.00 0.00 33.59 3.53
4527 5483 7.496529 TTCATCGAATGATATCCTTTGTTCC 57.503 36.000 0.00 0.00 39.39 3.62
4528 5484 9.956720 ATTTTCATCGAATGATATCCTTTGTTC 57.043 29.630 0.00 0.00 39.39 3.18
4530 5486 9.956720 GAATTTTCATCGAATGATATCCTTTGT 57.043 29.630 0.00 0.00 39.39 2.83
4531 5487 9.955208 TGAATTTTCATCGAATGATATCCTTTG 57.045 29.630 0.00 0.94 39.39 2.77
4532 5488 9.956720 GTGAATTTTCATCGAATGATATCCTTT 57.043 29.630 0.00 0.00 39.73 3.11
4533 5489 9.347240 AGTGAATTTTCATCGAATGATATCCTT 57.653 29.630 0.00 0.00 39.73 3.36
4534 5490 8.781196 CAGTGAATTTTCATCGAATGATATCCT 58.219 33.333 0.00 0.00 39.73 3.24
4535 5491 7.536622 GCAGTGAATTTTCATCGAATGATATCC 59.463 37.037 0.00 0.00 39.73 2.59
4536 5492 7.267811 CGCAGTGAATTTTCATCGAATGATATC 59.732 37.037 0.00 0.00 39.73 1.63
4537 5493 7.041848 TCGCAGTGAATTTTCATCGAATGATAT 60.042 33.333 0.00 0.00 39.73 1.63
4538 5494 6.257630 TCGCAGTGAATTTTCATCGAATGATA 59.742 34.615 0.00 0.00 39.73 2.15
4539 5495 5.065090 TCGCAGTGAATTTTCATCGAATGAT 59.935 36.000 0.00 0.00 39.73 2.45
4540 5496 4.391523 TCGCAGTGAATTTTCATCGAATGA 59.608 37.500 0.00 0.00 39.73 2.57
4541 5497 4.650985 TCGCAGTGAATTTTCATCGAATG 58.349 39.130 0.00 0.00 39.73 2.67
4542 5498 4.944962 TCGCAGTGAATTTTCATCGAAT 57.055 36.364 0.00 0.00 39.73 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.