Multiple sequence alignment - TraesCS2A01G324500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G324500 chr2A 100.000 2917 0 0 1 2917 554521807 554518891 0.000000e+00 5387
1 TraesCS2A01G324500 chr2A 87.455 550 66 3 2258 2806 554512320 554511773 5.300000e-177 630
2 TraesCS2A01G324500 chr2B 92.629 2008 102 20 933 2917 510786533 510788517 0.000000e+00 2846
3 TraesCS2A01G324500 chr2B 87.455 550 66 3 2258 2806 510792751 510793298 5.300000e-177 630
4 TraesCS2A01G324500 chr2B 81.188 808 121 23 1 795 510784636 510785425 3.190000e-174 621
5 TraesCS2A01G324500 chr2D 92.759 1312 57 17 749 2041 431968498 431969790 0.000000e+00 1862
6 TraesCS2A01G324500 chr2D 93.694 888 37 10 2035 2917 432000079 432000952 0.000000e+00 1312
7 TraesCS2A01G324500 chr2D 91.425 758 53 7 1 752 431967531 431968282 0.000000e+00 1029
8 TraesCS2A01G324500 chr2D 86.364 550 72 3 2258 2806 432029811 432030358 5.380000e-167 597


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G324500 chr2A 554518891 554521807 2916 True 5387.0 5387 100.0000 1 2917 1 chr2A.!!$R2 2916
1 TraesCS2A01G324500 chr2A 554511773 554512320 547 True 630.0 630 87.4550 2258 2806 1 chr2A.!!$R1 548
2 TraesCS2A01G324500 chr2B 510784636 510788517 3881 False 1733.5 2846 86.9085 1 2917 2 chr2B.!!$F2 2916
3 TraesCS2A01G324500 chr2B 510792751 510793298 547 False 630.0 630 87.4550 2258 2806 1 chr2B.!!$F1 548
4 TraesCS2A01G324500 chr2D 431967531 431969790 2259 False 1445.5 1862 92.0920 1 2041 2 chr2D.!!$F3 2040
5 TraesCS2A01G324500 chr2D 432000079 432000952 873 False 1312.0 1312 93.6940 2035 2917 1 chr2D.!!$F1 882
6 TraesCS2A01G324500 chr2D 432029811 432030358 547 False 597.0 597 86.3640 2258 2806 1 chr2D.!!$F2 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
565 574 0.250553 AACCGGTGGAAAAGATGCGA 60.251 50.0 8.52 0.0 0.0 5.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2247 3485 1.069022 TCAACTCGTAAGTTCGACGGG 60.069 52.381 0.0 0.0 43.99 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 1.742831 GCCGATGTGCTTGAAACCATA 59.257 47.619 0.00 0.00 0.00 2.74
61 63 5.346822 GCTTGAAACCATAGTCAAAAGCATG 59.653 40.000 0.00 0.00 35.76 4.06
80 82 1.072505 TCCTCAAAGACGGCCAACC 59.927 57.895 2.24 0.00 0.00 3.77
124 126 2.109834 TCCTGGCCTCAAAATCTTGGAA 59.890 45.455 3.32 0.00 33.01 3.53
125 127 2.899256 CCTGGCCTCAAAATCTTGGAAA 59.101 45.455 3.32 0.00 33.01 3.13
196 198 7.331026 TCCTTTATGTCGAAATCATCTGACTT 58.669 34.615 0.00 0.00 34.66 3.01
250 253 6.046593 AGTCCGCGATTTAATCTACAAATCA 58.953 36.000 8.23 0.00 40.76 2.57
282 285 4.359971 AAAAGTAAAACGCACGGAAACT 57.640 36.364 0.00 0.00 0.00 2.66
283 286 4.359971 AAAGTAAAACGCACGGAAACTT 57.640 36.364 0.00 0.00 0.00 2.66
286 289 4.099824 AGTAAAACGCACGGAAACTTTTG 58.900 39.130 0.00 0.00 0.00 2.44
331 335 0.960364 GGCGTTGCTTCTTCCCATCA 60.960 55.000 0.00 0.00 0.00 3.07
337 341 4.142315 CGTTGCTTCTTCCCATCAATGATT 60.142 41.667 0.00 0.00 0.00 2.57
370 374 2.375345 CGCCCCTACTTCCCATGGT 61.375 63.158 11.73 0.00 0.00 3.55
373 377 0.981277 CCCCTACTTCCCATGGTCGT 60.981 60.000 11.73 7.00 0.00 4.34
421 429 0.610174 ACAGCTGCGAGGAAGAATCA 59.390 50.000 15.27 0.00 0.00 2.57
483 491 3.382832 CCCCGAGTGAAGCTCCGT 61.383 66.667 0.00 0.00 41.10 4.69
543 552 3.925630 ATGGCCACCCACAAGCTCG 62.926 63.158 8.16 0.00 45.77 5.03
565 574 0.250553 AACCGGTGGAAAAGATGCGA 60.251 50.000 8.52 0.00 0.00 5.10
570 579 1.153353 GTGGAAAAGATGCGACGGAA 58.847 50.000 0.00 0.00 0.00 4.30
576 585 3.567797 GATGCGACGGAAGGCAGC 61.568 66.667 0.00 0.00 43.27 5.25
589 598 1.038130 AGGCAGCGGAACTACTCGAT 61.038 55.000 0.00 0.00 0.00 3.59
593 602 1.944676 GCGGAACTACTCGATGGCG 60.945 63.158 0.00 0.00 39.35 5.69
671 683 1.003233 GAGCTGAAACTTCCGCCCT 60.003 57.895 0.00 0.00 38.04 5.19
677 690 1.314730 GAAACTTCCGCCCTGTCAAA 58.685 50.000 0.00 0.00 0.00 2.69
710 723 5.734720 CGATAGGGGAAACTGCACATATAT 58.265 41.667 0.00 0.00 0.00 0.86
711 724 6.873997 CGATAGGGGAAACTGCACATATATA 58.126 40.000 0.00 0.00 0.00 0.86
716 729 5.308825 GGGAAACTGCACATATATACAGCT 58.691 41.667 8.68 0.00 33.35 4.24
726 739 6.295916 GCACATATATACAGCTTAAGGGGTCT 60.296 42.308 4.29 0.00 0.00 3.85
739 752 6.574662 GCTTAAGGGGTCTAATATACAGCTCC 60.575 46.154 4.29 0.00 0.00 4.70
827 1061 3.000727 CTGAAGACGGCGGTTATTTTCT 58.999 45.455 13.24 0.00 0.00 2.52
833 1067 1.828979 GGCGGTTATTTTCTGGGTCA 58.171 50.000 0.00 0.00 0.00 4.02
841 1075 2.690653 TTTTCTGGGTCAGGGCCGTG 62.691 60.000 19.57 19.57 31.51 4.94
856 1090 1.798087 CGTGGGGCATTTTACGGAC 59.202 57.895 0.00 0.00 33.27 4.79
878 1112 4.202172 ACCCGCTAGAGATCTCTTAAAAGC 60.202 45.833 29.54 27.29 40.93 3.51
1234 2453 1.303074 ACGCTCACCGACCTCTACA 60.303 57.895 0.00 0.00 41.02 2.74
1422 2641 4.218578 CAGCGGCTGGAGCTCGAT 62.219 66.667 22.11 4.55 44.06 3.59
1479 2698 2.656646 CAGTACCTGCAGTCGCCA 59.343 61.111 13.81 0.00 37.32 5.69
1492 2711 3.667960 GCAGTCGCCAGAAAAAGTATGTG 60.668 47.826 0.00 0.00 0.00 3.21
1497 2716 3.731867 CGCCAGAAAAAGTATGTGCCATC 60.732 47.826 0.00 0.00 0.00 3.51
1499 2718 3.763360 CCAGAAAAAGTATGTGCCATCCA 59.237 43.478 0.00 0.00 0.00 3.41
1501 2720 3.763897 AGAAAAAGTATGTGCCATCCACC 59.236 43.478 0.00 0.00 44.01 4.61
1502 2721 2.897271 AAAGTATGTGCCATCCACCA 57.103 45.000 0.00 0.00 44.01 4.17
1505 2724 1.095228 GTATGTGCCATCCACCACCG 61.095 60.000 0.00 0.00 44.01 4.94
1506 2725 1.558167 TATGTGCCATCCACCACCGT 61.558 55.000 0.00 0.00 44.01 4.83
1522 2742 3.306780 CCACCGTGTGTTCTTATCCTCTT 60.307 47.826 0.00 0.00 0.00 2.85
1550 2770 6.156083 TCTCTCCACCACACAATTGATACATA 59.844 38.462 13.59 0.00 0.00 2.29
1553 2773 8.490311 TCTCCACCACACAATTGATACATATTA 58.510 33.333 13.59 0.00 0.00 0.98
1554 2774 9.119418 CTCCACCACACAATTGATACATATTAA 57.881 33.333 13.59 0.00 0.00 1.40
1555 2775 8.898761 TCCACCACACAATTGATACATATTAAC 58.101 33.333 13.59 0.00 0.00 2.01
1556 2776 8.902806 CCACCACACAATTGATACATATTAACT 58.097 33.333 13.59 0.00 0.00 2.24
1557 2777 9.720667 CACCACACAATTGATACATATTAACTG 57.279 33.333 13.59 0.00 0.00 3.16
1558 2778 9.461312 ACCACACAATTGATACATATTAACTGT 57.539 29.630 13.59 0.00 0.00 3.55
1578 2798 5.009854 TGTTCGATCAGTTCATATGCTCA 57.990 39.130 0.00 0.00 0.00 4.26
1579 2799 4.805719 TGTTCGATCAGTTCATATGCTCAC 59.194 41.667 0.00 0.00 0.00 3.51
1594 2814 3.959573 GCTCACTGCATACTGATTTCC 57.040 47.619 0.00 0.00 42.31 3.13
1650 2870 4.758251 CGGGCGGAGTGTGCATCA 62.758 66.667 0.00 0.00 0.00 3.07
1658 2878 2.089980 GGAGTGTGCATCATGAGCTTT 58.910 47.619 15.20 0.00 0.00 3.51
1685 2905 1.536284 CGGATGTTCTACGAGAAGGCC 60.536 57.143 0.00 0.00 34.42 5.19
1760 2980 1.006102 CTTCCAGTGCGTCGAAGGT 60.006 57.895 0.00 0.00 31.34 3.50
1845 3065 3.473647 CGCTGGAGGCCCTGATGA 61.474 66.667 0.00 0.00 37.74 2.92
1883 3103 0.320160 ACTCTGACCCGTTTTACGCC 60.320 55.000 0.00 0.00 40.91 5.68
1884 3104 1.349259 CTCTGACCCGTTTTACGCCG 61.349 60.000 0.00 0.00 40.91 6.46
1962 3196 2.095567 CCAAGAGCAGAAAACATGTCCG 60.096 50.000 0.00 0.00 0.00 4.79
1971 3205 2.577606 AAACATGTCCGGATGTTGGA 57.422 45.000 21.16 0.00 44.15 3.53
1972 3206 2.577606 AACATGTCCGGATGTTGGAA 57.422 45.000 20.07 0.00 43.45 3.53
1977 3211 0.455815 GTCCGGATGTTGGAAATGCC 59.544 55.000 7.81 0.00 37.23 4.40
2064 3300 1.683790 GCACGCTGCCTGTAACGTAG 61.684 60.000 0.00 0.00 37.42 3.51
2093 3329 0.673985 CCCGCGTTCATCTGGAGATA 59.326 55.000 4.92 0.00 32.63 1.98
2097 3333 2.351253 CGCGTTCATCTGGAGATAGGAG 60.351 54.545 0.00 0.00 32.63 3.69
2247 3485 1.078426 AGCCATCCAACACCGTAGC 60.078 57.895 0.00 0.00 0.00 3.58
2275 3513 4.501071 GAACTTACGAGTTGATTAGGGCA 58.499 43.478 0.00 0.00 45.88 5.36
2291 3529 4.596180 CACGGCGCAATGATCCGC 62.596 66.667 10.83 5.62 46.49 5.54
2737 3975 3.000819 ATCCGGACGCAGGGAACA 61.001 61.111 6.12 0.00 35.60 3.18
2739 3977 2.798148 ATCCGGACGCAGGGAACAAC 62.798 60.000 6.12 0.00 35.60 3.32
2845 4083 6.048732 TGCTACTCCACAACTGATTTCATA 57.951 37.500 0.00 0.00 0.00 2.15
2850 4088 5.812642 ACTCCACAACTGATTTCATACGATC 59.187 40.000 0.00 0.00 0.00 3.69
2853 4091 6.978659 TCCACAACTGATTTCATACGATCTAC 59.021 38.462 0.00 0.00 0.00 2.59
2854 4092 6.980978 CCACAACTGATTTCATACGATCTACT 59.019 38.462 0.00 0.00 0.00 2.57
2855 4093 7.168302 CCACAACTGATTTCATACGATCTACTC 59.832 40.741 0.00 0.00 0.00 2.59
2888 4126 2.030457 CGAGATCATGCCGTTTGTTACC 59.970 50.000 0.00 0.00 0.00 2.85
2894 4132 3.003897 TCATGCCGTTTGTTACCTTTGTC 59.996 43.478 0.00 0.00 0.00 3.18
2897 4135 3.181495 TGCCGTTTGTTACCTTTGTCTTG 60.181 43.478 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.758755 TCGGCTTATTGCATCTCATCT 57.241 42.857 0.00 0.00 45.15 2.90
49 50 4.276926 GTCTTTGAGGACATGCTTTTGACT 59.723 41.667 0.00 0.00 36.35 3.41
61 63 1.235281 GGTTGGCCGTCTTTGAGGAC 61.235 60.000 0.00 0.00 35.66 3.85
88 90 1.079750 AGGAAGAGAAAGCGCCGAC 60.080 57.895 2.29 0.00 0.00 4.79
124 126 4.973168 TCACCTAGTCTTGTTGCATCTTT 58.027 39.130 0.00 0.00 0.00 2.52
125 127 4.623932 TCACCTAGTCTTGTTGCATCTT 57.376 40.909 0.00 0.00 0.00 2.40
227 230 6.281848 TGATTTGTAGATTAAATCGCGGAC 57.718 37.500 6.13 0.00 43.88 4.79
250 253 4.318050 GCGTTTTACTTTTACGAGACGGTT 60.318 41.667 0.00 0.00 37.47 4.44
282 285 4.320641 CCGCGAAAGGTAATTTCTCCAAAA 60.321 41.667 8.23 0.00 44.39 2.44
283 286 3.189702 CCGCGAAAGGTAATTTCTCCAAA 59.810 43.478 8.23 0.00 44.39 3.28
286 289 1.063616 GCCGCGAAAGGTAATTTCTCC 59.936 52.381 8.23 0.00 44.39 3.71
331 335 2.362077 GGCGGATTTGCTACCAATCATT 59.638 45.455 0.00 0.00 34.52 2.57
337 341 2.822255 GCGGCGGATTTGCTACCA 60.822 61.111 9.78 0.00 34.52 3.25
399 407 1.806461 TTCTTCCTCGCAGCTGTCGT 61.806 55.000 23.32 0.00 0.00 4.34
404 412 0.177604 CCTGATTCTTCCTCGCAGCT 59.822 55.000 0.00 0.00 0.00 4.24
439 447 1.134220 TGCAGTCGGAAGAGGTTGTTT 60.134 47.619 0.00 0.00 43.49 2.83
483 491 2.223805 CGACGTCTCCATGGATTCATCA 60.224 50.000 16.63 0.00 0.00 3.07
537 546 2.951475 TTCCACCGGTTTGCGAGCTT 62.951 55.000 2.97 0.00 0.00 3.74
543 552 1.934849 GCATCTTTTCCACCGGTTTGC 60.935 52.381 2.97 0.43 0.00 3.68
565 574 2.280552 TAGTTCCGCTGCCTTCCGT 61.281 57.895 0.00 0.00 0.00 4.69
570 579 1.038130 ATCGAGTAGTTCCGCTGCCT 61.038 55.000 0.00 0.00 0.00 4.75
576 585 1.944676 GCGCCATCGAGTAGTTCCG 60.945 63.158 0.00 0.00 38.10 4.30
604 613 1.683011 CCGTTGATTCTGATTGCCCCT 60.683 52.381 0.00 0.00 0.00 4.79
612 621 1.926561 CATCTCGCCGTTGATTCTGA 58.073 50.000 0.00 0.00 0.00 3.27
613 622 0.302890 GCATCTCGCCGTTGATTCTG 59.697 55.000 0.00 0.00 32.94 3.02
614 623 1.148157 CGCATCTCGCCGTTGATTCT 61.148 55.000 0.00 0.00 37.30 2.40
671 683 4.157656 CCCTATCGGCAGAAAATTTTGACA 59.842 41.667 8.47 0.00 0.00 3.58
677 690 3.662759 TTCCCCTATCGGCAGAAAATT 57.337 42.857 0.00 0.00 0.00 1.82
710 723 7.039223 GCTGTATATTAGACCCCTTAAGCTGTA 60.039 40.741 0.00 0.00 0.00 2.74
711 724 6.239629 GCTGTATATTAGACCCCTTAAGCTGT 60.240 42.308 0.00 0.00 0.00 4.40
716 729 5.783875 GGGAGCTGTATATTAGACCCCTTAA 59.216 44.000 0.00 0.00 31.61 1.85
726 739 6.584471 TTTTTCCTGGGGAGCTGTATATTA 57.416 37.500 0.00 0.00 31.21 0.98
754 986 3.316868 TCTTGCGAAAACCTTTAACCTGG 59.683 43.478 0.00 0.00 0.00 4.45
763 995 1.880027 GGACATGTCTTGCGAAAACCT 59.120 47.619 24.50 0.00 0.00 3.50
764 996 1.399727 CGGACATGTCTTGCGAAAACC 60.400 52.381 24.50 4.39 0.00 3.27
808 1042 2.095372 CCAGAAAATAACCGCCGTCTTC 59.905 50.000 0.00 0.00 0.00 2.87
841 1075 2.116533 CGGGTCCGTAAAATGCCCC 61.117 63.158 0.55 0.00 36.04 5.80
846 1080 2.381911 TCTCTAGCGGGTCCGTAAAAT 58.618 47.619 11.25 0.00 42.09 1.82
856 1090 4.202161 TGCTTTTAAGAGATCTCTAGCGGG 60.202 45.833 27.96 18.94 39.30 6.13
878 1112 2.508716 CCAGATCCCATCCTATCCCATG 59.491 54.545 0.00 0.00 0.00 3.66
1432 2651 2.876645 GCAGAGAACGGCGTCGAG 60.877 66.667 20.03 3.13 40.11 4.04
1443 2662 3.295273 ACGCTCACGGTGCAGAGA 61.295 61.111 2.51 0.00 46.04 3.10
1499 2718 1.975680 AGGATAAGAACACACGGTGGT 59.024 47.619 13.48 4.82 37.94 4.16
1501 2720 3.594603 AGAGGATAAGAACACACGGTG 57.405 47.619 6.58 6.58 39.75 4.94
1502 2721 3.833070 AGAAGAGGATAAGAACACACGGT 59.167 43.478 0.00 0.00 0.00 4.83
1505 2724 6.930731 AGAGAAGAAGAGGATAAGAACACAC 58.069 40.000 0.00 0.00 0.00 3.82
1506 2725 6.153680 GGAGAGAAGAAGAGGATAAGAACACA 59.846 42.308 0.00 0.00 0.00 3.72
1522 2742 3.390967 TCAATTGTGTGGTGGAGAGAAGA 59.609 43.478 5.13 0.00 0.00 2.87
1555 2775 5.045872 TGAGCATATGAACTGATCGAACAG 58.954 41.667 19.95 19.95 42.78 3.16
1556 2776 4.805719 GTGAGCATATGAACTGATCGAACA 59.194 41.667 6.97 0.00 31.77 3.18
1557 2777 5.046529 AGTGAGCATATGAACTGATCGAAC 58.953 41.667 6.97 0.00 31.77 3.95
1558 2778 5.045872 CAGTGAGCATATGAACTGATCGAA 58.954 41.667 20.54 0.00 42.09 3.71
1559 2779 4.614946 CAGTGAGCATATGAACTGATCGA 58.385 43.478 20.54 0.00 42.09 3.59
1560 2780 3.183976 GCAGTGAGCATATGAACTGATCG 59.816 47.826 25.65 9.50 42.09 3.69
1561 2781 4.728917 GCAGTGAGCATATGAACTGATC 57.271 45.455 25.65 12.87 42.09 2.92
1578 2798 6.992063 CTTACAAGGAAATCAGTATGCAGT 57.008 37.500 0.00 0.00 34.76 4.40
1594 2814 2.409975 TCTCCGCGAAAACCTTACAAG 58.590 47.619 8.23 0.00 0.00 3.16
1640 2860 2.681848 GCTAAAGCTCATGATGCACACT 59.318 45.455 16.20 3.96 38.21 3.55
1650 2870 2.292267 CATCCGGTTGCTAAAGCTCAT 58.708 47.619 0.00 0.00 42.66 2.90
1658 2878 2.093890 TCGTAGAACATCCGGTTGCTA 58.906 47.619 12.54 4.34 40.63 3.49
1760 2980 3.936203 ACCTCCGGCTGCGTGAAA 61.936 61.111 0.00 0.00 0.00 2.69
1862 3082 1.193874 GCGTAAAACGGGTCAGAGTTG 59.806 52.381 1.25 0.00 42.82 3.16
1883 3103 4.473199 TGAAGTTTCTGTACGAGATGACG 58.527 43.478 0.00 0.00 39.31 4.35
1884 3104 5.164041 GCTTGAAGTTTCTGTACGAGATGAC 60.164 44.000 0.00 0.00 0.00 3.06
1972 3206 9.935241 CATACTCTATGTTATACTCTTGGCATT 57.065 33.333 0.00 0.00 0.00 3.56
2045 3281 1.683790 CTACGTTACAGGCAGCGTGC 61.684 60.000 15.11 0.00 44.08 5.34
2064 3300 1.717194 TGAACGCGGGTCTGAAATAC 58.283 50.000 12.47 0.00 0.00 1.89
2122 3358 4.105733 ATCGTGGCGCGTCGTGTA 62.106 61.111 20.88 0.00 42.13 2.90
2229 3467 1.078426 GCTACGGTGTTGGATGGCT 60.078 57.895 0.00 0.00 0.00 4.75
2247 3485 1.069022 TCAACTCGTAAGTTCGACGGG 60.069 52.381 0.00 0.00 43.99 5.28
2585 3823 4.504916 CTCAGCCTGGCGACGGAG 62.505 72.222 13.96 14.48 39.98 4.63
2737 3975 0.822121 GTTGGGCCTCCTTGTTCGTT 60.822 55.000 4.53 0.00 0.00 3.85
2739 3977 2.325082 CGTTGGGCCTCCTTGTTCG 61.325 63.158 4.53 0.00 0.00 3.95
2845 4083 4.996122 CGTATTCTGGTAGGAGTAGATCGT 59.004 45.833 0.00 0.00 0.00 3.73
2850 4088 6.231951 TGATCTCGTATTCTGGTAGGAGTAG 58.768 44.000 0.00 0.00 37.66 2.57
2853 4091 5.621104 GCATGATCTCGTATTCTGGTAGGAG 60.621 48.000 0.00 0.00 37.73 3.69
2854 4092 4.218635 GCATGATCTCGTATTCTGGTAGGA 59.781 45.833 0.00 0.00 0.00 2.94
2855 4093 4.489810 GCATGATCTCGTATTCTGGTAGG 58.510 47.826 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.