AutoCloner

Multiple sequence alignment - TraesCS2A01G323700

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BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G323700	chr2A	100.000	9829	0	0	1	9829	554010967	554020795	0.000000e+00	18151.0
1	TraesCS2A01G323700	chr2A	89.302	860	31	25	6345	7166	654741441	654740605	0.000000e+00	1022.0
2	TraesCS2A01G323700	chr2A	88.626	844	56	19	6350	7166	166245747	166244917	0.000000e+00	990.0
3	TraesCS2A01G323700	chr2A	95.183	519	25	0	1	519	38615880	38615362	0.000000e+00	821.0
4	TraesCS2A01G323700	chr2A	90.619	565	42	5	6938	7493	666122260	666121698	0.000000e+00	739.0
5	TraesCS2A01G323700	chr2A	88.079	151	16	2	9084	9234	3871856	3872004	2.820000e-40	178.0
6	TraesCS2A01G323700	chr2A	84.314	102	8	3	5251	5351	398465038	398465132	1.050000e-14	93.5
7	TraesCS2A01G323700	chr2A	84.314	102	8	3	5251	5351	398850532	398850438	1.050000e-14	93.5
8	TraesCS2A01G323700	chr2A	95.918	49	2	0	9042	9090	554020050	554020098	8.180000e-11	80.5
9	TraesCS2A01G323700	chr2A	97.500	40	1	0	9247	9286	554020177	554020216	1.770000e-07	69.4
10	TraesCS2A01G323700	chr2A	97.500	40	1	0	9211	9250	554020213	554020252	1.770000e-07	69.4
11	TraesCS2A01G323700	chr2A	94.737	38	1	1	9322	9359	554020261	554020297	3.830000e-04	58.4
12	TraesCS2A01G323700	chr2A	94.737	38	1	1	9295	9331	554020288	554020325	3.830000e-04	58.4
13	TraesCS2A01G323700	chr2D	97.809	1643	26	5	2223	3860	433219947	433218310	0.000000e+00	2826.0
14	TraesCS2A01G323700	chr2D	96.266	1714	49	10	521	2225	433221701	433219994	0.000000e+00	2796.0
15	TraesCS2A01G323700	chr2D	95.869	1501	30	10	7491	8978	433214842	433213361	0.000000e+00	2399.0
16	TraesCS2A01G323700	chr2D	97.225	1189	16	9	5165	6344	433217455	433216275	0.000000e+00	1997.0
17	TraesCS2A01G323700	chr2D	95.365	1165	39	2	6343	7494	433216226	433215064	0.000000e+00	1838.0
18	TraesCS2A01G323700	chr2D	98.064	878	13	2	4050	4927	433218327	433217454	0.000000e+00	1524.0
19	TraesCS2A01G323700	chr2D	92.034	590	39	4	8296	8878	245682265	245681677	0.000000e+00	822.0
20	TraesCS2A01G323700	chr2D	97.959	245	5	0	4926	5170	517722279	517722523	9.120000e-115	425.0
21	TraesCS2A01G323700	chr2D	81.410	156	11	6	1489	1626	122864266	122864111	2.900000e-20	111.0
22	TraesCS2A01G323700	chr5D	95.202	1188	42	6	5165	6344	34273148	34274328	0.000000e+00	1864.0
23	TraesCS2A01G323700	chr5D	96.241	878	25	4	4050	4927	34272280	34273149	0.000000e+00	1432.0
24	TraesCS2A01G323700	chr5D	91.784	852	35	13	6343	7163	34274377	34275224	0.000000e+00	1153.0
25	TraesCS2A01G323700	chr5D	94.509	692	25	7	3171	3860	34271617	34272297	0.000000e+00	1055.0
26	TraesCS2A01G323700	chr5D	95.941	271	9	2	2689	2958	34270964	34271233	1.170000e-118	438.0
27	TraesCS2A01G323700	chr5D	95.385	260	11	1	4925	5184	359002958	359003216	7.100000e-111	412.0
28	TraesCS2A01G323700	chr5D	91.556	225	15	4	2470	2692	34270686	34270908	3.450000e-79	307.0
29	TraesCS2A01G323700	chr5D	95.588	136	6	0	3033	3168	34271420	34271555	1.660000e-52	219.0
30	TraesCS2A01G323700	chr7A	95.021	1185	45	5	5168	6344	200008360	200007182	0.000000e+00	1849.0
31	TraesCS2A01G323700	chr7A	95.641	803	30	2	4102	4904	200010067	200009270	0.000000e+00	1284.0
32	TraesCS2A01G323700	chr7A	90.813	849	41	13	6349	7166	200007127	200006285	0.000000e+00	1101.0
33	TraesCS2A01G323700	chr7A	88.626	844	56	19	6350	7166	8459081	8458251	0.000000e+00	990.0
34	TraesCS2A01G323700	chr7A	92.185	691	27	10	3171	3860	200010891	200010227	0.000000e+00	952.0
35	TraesCS2A01G323700	chr7A	95.000	480	24	0	2689	3168	200011468	200010989	0.000000e+00	754.0
36	TraesCS2A01G323700	chr7A	83.305	581	77	9	5781	6344	188900862	188901439	1.460000e-142	518.0
37	TraesCS2A01G323700	chr7A	89.884	346	26	4	7063	7408	130575577	130575241	4.220000e-118	436.0
38	TraesCS2A01G323700	chr7A	99.474	190	1	0	3863	4052	729274216	729274027	7.310000e-91	346.0
39	TraesCS2A01G323700	chr7A	98.964	193	1	1	3858	4050	24466171	24466362	2.630000e-90	344.0
40	TraesCS2A01G323700	chr7A	97.059	204	4	2	3864	4065	15838111	15837908	9.450000e-90	342.0
41	TraesCS2A01G323700	chr7A	94.554	202	8	2	2491	2692	200011722	200011524	9.590000e-80	309.0
42	TraesCS2A01G323700	chr7A	94.554	202	8	2	2491	2692	200019084	200019282	9.590000e-80	309.0
43	TraesCS2A01G323700	chr7A	96.341	164	6	0	2689	2852	200019338	200019501	4.520000e-68	270.0
44	TraesCS2A01G323700	chr7A	85.039	127	7	8	5848	5964	3968277	3968153	1.730000e-22	119.0
45	TraesCS2A01G323700	chr7A	89.247	93	7	1	7404	7493	130566513	130566421	8.070000e-21	113.0
46	TraesCS2A01G323700	chr7A	98.214	56	1	0	4050	4105	200010244	200010189	2.260000e-16	99.0
47	TraesCS2A01G323700	chr7A	94.872	39	1	1	4891	4928	200008399	200008361	1.070000e-04	60.2
48	TraesCS2A01G323700	chr6B	91.119	1081	66	10	6435	7488	56990283	56991360	0.000000e+00	1437.0
49	TraesCS2A01G323700	chr1A	95.383	888	26	5	4050	4927	452023064	452023946	0.000000e+00	1399.0
50	TraesCS2A01G323700	chr1A	94.700	717	27	3	5165	5876	452023945	452024655	0.000000e+00	1103.0
51	TraesCS2A01G323700	chr1A	92.899	690	31	7	3171	3860	452022410	452023081	0.000000e+00	987.0
52	TraesCS2A01G323700	chr1A	95.367	518	22	1	1	518	240878521	240879036	0.000000e+00	822.0
53	TraesCS2A01G323700	chr1A	95.218	481	22	1	2689	3168	452021843	452022323	0.000000e+00	760.0
54	TraesCS2A01G323700	chr1A	84.083	578	76	8	5781	6344	498661063	498661638	2.410000e-150	544.0
55	TraesCS2A01G323700	chr1A	94.902	255	13	0	4914	5168	505729344	505729090	5.530000e-107	399.0
56	TraesCS2A01G323700	chr1A	80.952	420	47	18	2690	3094	545995346	545995747	1.600000e-77	302.0
57	TraesCS2A01G323700	chr1A	93.662	142	7	2	2485	2626	452021603	452021742	2.780000e-50	211.0
58	TraesCS2A01G323700	chr1A	81.853	259	36	8	3026	3282	584300678	584300429	3.600000e-49	207.0
59	TraesCS2A01G323700	chr1A	88.095	126	14	1	2689	2813	584300814	584300689	2.210000e-31	148.0
60	TraesCS2A01G323700	chr1A	81.333	150	20	6	1488	1632	50962395	50962541	2.240000e-21	115.0
61	TraesCS2A01G323700	chr1A	81.301	123	21	2	7728	7849	166851394	166851515	2.260000e-16	99.0
62	TraesCS2A01G323700	chr1A	88.889	63	7	0	6610	6672	500983418	500983356	2.940000e-10	78.7
63	TraesCS2A01G323700	chr4A	94.695	886	34	3	4050	4927	41898837	41897957	0.000000e+00	1363.0
64	TraesCS2A01G323700	chr4A	93.956	728	31	3	5165	5887	41897958	41897239	0.000000e+00	1088.0
65	TraesCS2A01G323700	chr4A	93.188	690	29	7	3171	3860	41899491	41898820	0.000000e+00	998.0
66	TraesCS2A01G323700	chr4A	94.398	482	22	2	2689	3168	41900067	41899589	0.000000e+00	736.0
67	TraesCS2A01G323700	chr4A	92.969	256	16	2	4912	5166	61317941	61318195	1.210000e-98	372.0
68	TraesCS2A01G323700	chr4A	93.269	208	12	2	2485	2692	41900328	41900123	1.240000e-78	305.0
69	TraesCS2A01G323700	chr4A	88.462	78	9	0	3430	3507	683500063	683500140	2.920000e-15	95.3
70	TraesCS2A01G323700	chr4A	85.897	78	10	1	9009	9085	649200931	649200854	2.280000e-11	82.4
71	TraesCS2A01G323700	chr2B	88.966	861	33	24	6345	7166	521512868	521512031	0.000000e+00	1007.0
72	TraesCS2A01G323700	chr2B	88.092	823	63	12	1055	1866	310495843	310496641	0.000000e+00	944.0
73	TraesCS2A01G323700	chr2B	93.381	423	15	5	8296	8713	310501108	310501522	1.810000e-171	614.0
74	TraesCS2A01G323700	chr2B	90.023	441	22	7	7860	8298	310498384	310498804	1.440000e-152	551.0
75	TraesCS2A01G323700	chr2B	84.083	578	76	7	5781	6344	349762709	349762134	2.410000e-150	544.0
76	TraesCS2A01G323700	chr2B	85.127	511	56	16	9324	9824	601180634	601180134	1.140000e-138	505.0
77	TraesCS2A01G323700	chr2B	86.400	375	45	5	5973	6344	63276244	63275873	1.190000e-108	405.0
78	TraesCS2A01G323700	chr2B	80.861	418	52	13	2690	3094	178764190	178763788	4.460000e-78	303.0
79	TraesCS2A01G323700	chr2B	90.129	233	17	5	1987	2213	310498150	310498382	2.080000e-76	298.0
80	TraesCS2A01G323700	chr2B	84.277	159	25	0	9084	9242	601180812	601180654	1.320000e-33	156.0
81	TraesCS2A01G323700	chr2B	91.089	101	9	0	9086	9186	785591974	785591874	4.790000e-28	137.0
82	TraesCS2A01G323700	chr2B	95.238	84	4	0	1913	1996	310496770	310496853	6.190000e-27	134.0
83	TraesCS2A01G323700	chr2B	87.059	85	7	3	9002	9084	601180852	601180770	1.050000e-14	93.5
84	TraesCS2A01G323700	chr2B	94.231	52	3	0	1486	1537	209085351	209085300	8.180000e-11	80.5
85	TraesCS2A01G323700	chr7D	95.859	483	17	1	2689	3168	84894164	84893682	0.000000e+00	778.0
86	TraesCS2A01G323700	chr7D	86.346	520	69	2	1	519	609013090	609012572	5.150000e-157	566.0
87	TraesCS2A01G323700	chr7D	83.513	558	70	16	6946	7493	102573938	102574483	1.470000e-137	501.0
88	TraesCS2A01G323700	chr7D	98.000	250	5	0	4917	5166	612840464	612840713	1.520000e-117	435.0
89	TraesCS2A01G323700	chr7D	97.959	245	5	0	4926	5170	127990546	127990302	9.120000e-115	425.0
90	TraesCS2A01G323700	chr7D	94.554	202	6	3	2491	2692	84894405	84894209	3.450000e-79	307.0
91	TraesCS2A01G323700	chr7D	85.616	146	5	6	3171	3316	84893584	84893455	1.330000e-28	139.0
92	TraesCS2A01G323700	chr7D	80.606	165	32	0	9086	9250	42493863	42493699	2.880000e-25	128.0
93	TraesCS2A01G323700	chr7D	84.416	77	11	1	9009	9085	42493897	42493822	3.810000e-09	75.0
94	TraesCS2A01G323700	chr3A	91.055	559	45	4	6938	7493	734758443	734757887	0.000000e+00	750.0
95	TraesCS2A01G323700	chr3A	95.703	256	7	4	4913	5166	469347201	469346948	9.190000e-110	409.0
96	TraesCS2A01G323700	chr3A	94.488	254	13	1	4914	5166	463386179	463386432	3.330000e-104	390.0
97	TraesCS2A01G323700	chr3A	83.213	417	49	11	9418	9828	19180788	19180387	7.260000e-96	363.0
98	TraesCS2A01G323700	chr3A	91.353	266	20	3	4902	5166	137788679	137788416	2.610000e-95	361.0
99	TraesCS2A01G323700	chr3A	98.964	193	2	0	3860	4052	616251778	616251586	7.310000e-91	346.0
100	TraesCS2A01G323700	chr3A	88.983	118	13	0	9133	9250	19180970	19180853	7.960000e-31	147.0
101	TraesCS2A01G323700	chr3A	88.636	88	10	0	7762	7849	303284313	303284400	3.750000e-19	108.0
102	TraesCS2A01G323700	chr6A	91.651	539	40	3	6938	7473	182495964	182495428	0.000000e+00	741.0
103	TraesCS2A01G323700	chr6A	84.256	578	73	9	5781	6344	21404733	21404160	1.870000e-151	547.0
104	TraesCS2A01G323700	chr6A	94.444	252	12	2	4915	5166	22550288	22550039	4.310000e-103	387.0
105	TraesCS2A01G323700	chr6A	98.969	194	1	1	3858	4051	310143937	310143745	7.310000e-91	346.0
106	TraesCS2A01G323700	chr6A	90.541	74	3	3	7790	7860	87211471	87211399	2.920000e-15	95.3
107	TraesCS2A01G323700	chr7B	91.144	542	39	4	6938	7472	293125495	293124956	0.000000e+00	726.0
108	TraesCS2A01G323700	chr7B	86.486	518	67	2	1	518	615894716	615895230	5.150000e-157	566.0
109	TraesCS2A01G323700	chr7B	86.100	518	69	2	1	518	615869734	615870248	1.120000e-153	555.0
110	TraesCS2A01G323700	chr7B	98.974	195	2	0	3863	4057	670283384	670283190	5.650000e-92	350.0
111	TraesCS2A01G323700	chr7B	98.000	200	1	3	3853	4050	443081775	443081577	2.630000e-90	344.0
112	TraesCS2A01G323700	chr7B	90.110	91	5	3	1549	1636	505937388	505937477	2.240000e-21	115.0
113	TraesCS2A01G323700	chr7B	82.812	128	14	5	1492	1615	48465490	48465613	3.750000e-19	108.0
114	TraesCS2A01G323700	chr4B	89.735	565	47	7	6938	7493	671787680	671787118	0.000000e+00	712.0
115	TraesCS2A01G323700	chr4B	87.701	187	18	4	6351	6535	17926743	17926926	7.730000e-51	213.0
116	TraesCS2A01G323700	chr4B	78.298	235	27	15	3293	3507	600671155	600671385	8.010000e-26	130.0
117	TraesCS2A01G323700	chr1B	86.873	518	64	3	4	520	6069217	6069731	2.380000e-160	577.0
118	TraesCS2A01G323700	chr1B	85.600	375	48	5	5973	6344	661033975	661033604	1.200000e-103	388.0
119	TraesCS2A01G323700	chr1B	91.803	61	3	2	7790	7849	182196400	182196459	6.330000e-12	84.2
120	TraesCS2A01G323700	chr3B	86.486	518	67	2	1	518	818709910	818710424	5.150000e-157	566.0
121	TraesCS2A01G323700	chr3B	98.477	197	3	0	3860	4056	642821163	642821359	2.030000e-91	348.0
122	TraesCS2A01G323700	chr3B	95.327	214	5	4	3855	4067	112101026	112100817	1.580000e-87	335.0
123	TraesCS2A01G323700	chr5B	86.434	516	69	1	1	516	298874270	298873756	1.850000e-156	564.0
124	TraesCS2A01G323700	chr5B	96.063	254	9	1	4913	5166	180025154	180025406	7.100000e-111	412.0
125	TraesCS2A01G323700	chr5B	95.652	253	10	1	4914	5166	82033551	82033802	1.190000e-108	405.0
126	TraesCS2A01G323700	chr5B	92.079	101	8	0	9086	9186	8972271	8972171	1.030000e-29	143.0
127	TraesCS2A01G323700	chr6D	86.214	515	71	0	3	517	95311593	95312107	8.620000e-155	558.0
128	TraesCS2A01G323700	chr6D	82.192	146	21	4	1489	1630	153810652	153810796	4.820000e-23	121.0
129	TraesCS2A01G323700	chr6D	91.011	89	6	2	1549	1636	320698153	320698240	1.730000e-22	119.0
130	TraesCS2A01G323700	chr5A	89.867	375	34	4	6938	7311	475843727	475843356	6.910000e-131	479.0
131	TraesCS2A01G323700	chr5A	93.333	285	12	6	4926	5208	411605786	411605507	1.980000e-111	414.0
132	TraesCS2A01G323700	chr5A	92.126	254	18	2	4913	5166	2848798	2849049	3.380000e-94	357.0
133	TraesCS2A01G323700	chr5A	93.069	202	12	2	2689	2889	25098225	25098425	2.680000e-75	294.0
134	TraesCS2A01G323700	chr5A	90.323	62	4	2	7790	7850	195694305	195694365	8.180000e-11	80.5
135	TraesCS2A01G323700	chr4D	98.367	245	4	0	4926	5170	111717972	111718216	1.960000e-116	431.0
136	TraesCS2A01G323700	chr4D	98.367	245	3	1	4926	5170	231874766	231875009	7.050000e-116	429.0
137	TraesCS2A01G323700	chr4D	97.959	245	5	0	4926	5170	32130003	32130247	9.120000e-115	425.0
138	TraesCS2A01G323700	chr4D	97.959	245	5	0	4926	5170	368597788	368598032	9.120000e-115	425.0
139	TraesCS2A01G323700	chr4D	87.500	112	12	2	3293	3403	476315722	476315832	2.880000e-25	128.0
140	TraesCS2A01G323700	chr4D	89.286	56	6	0	3452	3507	476315897	476315952	4.930000e-08	71.3
141	TraesCS2A01G323700	chrUn	88.136	118	14	0	9084	9201	296581506	296581623	3.700000e-29	141.0
142	TraesCS2A01G323700	chrUn	87.603	121	15	0	9084	9204	313914926	313914806	3.700000e-29	141.0
143	TraesCS2A01G323700	chrUn	79.592	147	18	7	1492	1626	319857181	319857035	2.920000e-15	95.3
144	TraesCS2A01G323700	chrUn	79.592	147	18	7	1492	1626	331092961	331093107	2.920000e-15	95.3
145	TraesCS2A01G323700	chrUn	84.314	102	8	3	5251	5351	271199482	271199576	1.050000e-14	93.5
146	TraesCS2A01G323700	chrUn	87.179	78	10	0	9008	9085	296581472	296581549	1.360000e-13	89.8
147	TraesCS2A01G323700	chrUn	87.179	78	10	0	9008	9085	313914960	313914883	1.360000e-13	89.8
148	TraesCS2A01G323700	chr3D	88.136	118	14	0	9084	9201	13281507	13281624	3.700000e-29	141.0
149	TraesCS2A01G323700	chr3D	85.593	118	17	0	7732	7849	263228260	263228377	3.730000e-24	124.0
150	TraesCS2A01G323700	chr3D	84.483	116	16	2	7732	7846	162839203	162839089	8.070000e-21	113.0
151	TraesCS2A01G323700	chr3D	81.897	116	19	2	7732	7846	162835907	162835793	8.130000e-16	97.1
152	TraesCS2A01G323700	chr3D	87.179	78	10	0	9008	9085	13281473	13281550	1.360000e-13	89.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G323700	chr2A	554010967	554020795	9828	False	3081.183333	18151	96.732000	1	9829	6	chr2A.!!$F3	9828
1	TraesCS2A01G323700	chr2A	654740605	654741441	836	True	1022.000000	1022	89.302000	6345	7166	1	chr2A.!!$R4	821
2	TraesCS2A01G323700	chr2A	166244917	166245747	830	True	990.000000	990	88.626000	6350	7166	1	chr2A.!!$R2	816
3	TraesCS2A01G323700	chr2A	38615362	38615880	518	True	821.000000	821	95.183000	1	519	1	chr2A.!!$R1	518
4	TraesCS2A01G323700	chr2A	666121698	666122260	562	True	739.000000	739	90.619000	6938	7493	1	chr2A.!!$R5	555
5	TraesCS2A01G323700	chr2D	433213361	433221701	8340	True	2230.000000	2826	96.766333	521	8978	6	chr2D.!!$R3	8457
6	TraesCS2A01G323700	chr2D	245681677	245682265	588	True	822.000000	822	92.034000	8296	8878	1	chr2D.!!$R2	582
7	TraesCS2A01G323700	chr5D	34270686	34275224	4538	False	924.000000	1864	94.403000	2470	7163	7	chr5D.!!$F2	4693
8	TraesCS2A01G323700	chr7A	8458251	8459081	830	True	990.000000	990	88.626000	6350	7166	1	chr7A.!!$R2	816
9	TraesCS2A01G323700	chr7A	200006285	200011722	5437	True	801.025000	1849	94.537500	2491	7166	8	chr7A.!!$R7	4675
10	TraesCS2A01G323700	chr7A	188900862	188901439	577	False	518.000000	518	83.305000	5781	6344	1	chr7A.!!$F2	563
11	TraesCS2A01G323700	chr6B	56990283	56991360	1077	False	1437.000000	1437	91.119000	6435	7488	1	chr6B.!!$F1	1053
12	TraesCS2A01G323700	chr1A	452021603	452024655	3052	False	892.000000	1399	94.372400	2485	5876	5	chr1A.!!$F6	3391
13	TraesCS2A01G323700	chr1A	240878521	240879036	515	False	822.000000	822	95.367000	1	518	1	chr1A.!!$F3	517
14	TraesCS2A01G323700	chr1A	498661063	498661638	575	False	544.000000	544	84.083000	5781	6344	1	chr1A.!!$F4	563
15	TraesCS2A01G323700	chr4A	41897239	41900328	3089	True	898.000000	1363	93.901200	2485	5887	5	chr4A.!!$R2	3402
16	TraesCS2A01G323700	chr2B	521512031	521512868	837	True	1007.000000	1007	88.966000	6345	7166	1	chr2B.!!$R5	821
17	TraesCS2A01G323700	chr2B	349762134	349762709	575	True	544.000000	544	84.083000	5781	6344	1	chr2B.!!$R4	563
18	TraesCS2A01G323700	chr2B	310495843	310501522	5679	False	508.200000	944	91.372600	1055	8713	5	chr2B.!!$F1	7658
19	TraesCS2A01G323700	chr2B	601180134	601180852	718	True	251.500000	505	85.487667	9002	9824	3	chr2B.!!$R7	822
20	TraesCS2A01G323700	chr7D	609012572	609013090	518	True	566.000000	566	86.346000	1	519	1	chr7D.!!$R2	518
21	TraesCS2A01G323700	chr7D	102573938	102574483	545	False	501.000000	501	83.513000	6946	7493	1	chr7D.!!$F1	547
22	TraesCS2A01G323700	chr7D	84893455	84894405	950	True	408.000000	778	92.009667	2491	3316	3	chr7D.!!$R4	825
23	TraesCS2A01G323700	chr3A	734757887	734758443	556	True	750.000000	750	91.055000	6938	7493	1	chr3A.!!$R4	555
24	TraesCS2A01G323700	chr3A	19180387	19180970	583	True	255.000000	363	86.098000	9133	9828	2	chr3A.!!$R5	695
25	TraesCS2A01G323700	chr6A	182495428	182495964	536	True	741.000000	741	91.651000	6938	7473	1	chr6A.!!$R4	535
26	TraesCS2A01G323700	chr6A	21404160	21404733	573	True	547.000000	547	84.256000	5781	6344	1	chr6A.!!$R1	563
27	TraesCS2A01G323700	chr7B	293124956	293125495	539	True	726.000000	726	91.144000	6938	7472	1	chr7B.!!$R1	534
28	TraesCS2A01G323700	chr7B	615894716	615895230	514	False	566.000000	566	86.486000	1	518	1	chr7B.!!$F4	517
29	TraesCS2A01G323700	chr7B	615869734	615870248	514	False	555.000000	555	86.100000	1	518	1	chr7B.!!$F3	517
30	TraesCS2A01G323700	chr4B	671787118	671787680	562	True	712.000000	712	89.735000	6938	7493	1	chr4B.!!$R1	555
31	TraesCS2A01G323700	chr1B	6069217	6069731	514	False	577.000000	577	86.873000	4	520	1	chr1B.!!$F1	516
32	TraesCS2A01G323700	chr3B	818709910	818710424	514	False	566.000000	566	86.486000	1	518	1	chr3B.!!$F2	517
33	TraesCS2A01G323700	chr5B	298873756	298874270	514	True	564.000000	564	86.434000	1	516	1	chr5B.!!$R2	515
34	TraesCS2A01G323700	chr6D	95311593	95312107	514	False	558.000000	558	86.214000	3	517	1	chr6D.!!$F1	514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
113	114	0.031313	TGGGTAGGGCACGGGTATAA	60.031	55.000	0.00	0.00	0.00	0.98	F
744	746	0.178068	GGAGTTATGAGGGCGCTTCA	59.822	55.000	7.64	12.58	0.00	3.02	F
1092	1095	0.317160	CAAAAGGCCCCTTCGGAAAC	59.683	55.000	0.00	0.00	34.84	2.78	F
2450	3914	0.670854	GTCTTGGTTGTCGAGAGGGC	60.671	60.000	0.00	0.00	36.61	5.19	F
3226	4961	0.179045	CATCCCGATGGGTTCCTGTC	60.179	60.000	1.04	0.00	44.74	3.51	F
4018	5762	0.037303	ACCTCATGGTCACAAGGCAG	59.963	55.000	0.00	0.00	44.78	4.85	F
4031	5775	0.111253	AAGGCAGCAGCTTTACCACT	59.889	50.000	0.00	0.00	38.40	4.00	F
4043	5787	0.248289	TTACCACTACGCCAAGGCTC	59.752	55.000	9.73	0.00	39.32	4.70	F
4044	5788	1.610554	TACCACTACGCCAAGGCTCC	61.611	60.000	9.73	0.00	39.32	4.70	F
4045	5789	2.125106	CACTACGCCAAGGCTCCC	60.125	66.667	9.73	0.00	39.32	4.30	F
4055	5799	2.128226	AGGCTCCCCTTCCACCAT	59.872	61.111	0.00	0.00	38.74	3.55	F
4967	7731	0.179148	GGGCCTAATGCGTTTTTCGG	60.179	55.000	0.84	0.00	42.61	4.30	F
4968	7732	0.179148	GGCCTAATGCGTTTTTCGGG	60.179	55.000	0.00	0.00	42.61	5.14	F
4974	7738	0.524414	ATGCGTTTTTCGGGGCTAAC	59.476	50.000	0.00	0.00	40.26	2.34	F
4975	7739	0.535553	TGCGTTTTTCGGGGCTAACT	60.536	50.000	0.00	0.00	40.26	2.24	F
4976	7740	0.594602	GCGTTTTTCGGGGCTAACTT	59.405	50.000	0.00	0.00	40.26	2.66	F
7017	9895	0.745845	GTGCACCATCGCTTCCTCAT	60.746	55.000	5.22	0.00	0.00	2.90	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1003	1005	0.322648	CAGAGCACCTCACATGACCA	59.677	55.000	0.00	0.00	32.06	4.02	R
2499	3963	1.000896	ATACAACACCCTGGCCTGC	60.001	57.895	3.32	0.00	0.00	4.85	R
2583	4047	1.819928	TTCTAGCAAGCAATTCGGCA	58.180	45.000	0.00	0.00	35.83	5.69	R
4012	5756	0.111253	AGTGGTAAAGCTGCTGCCTT	59.889	50.000	12.44	8.34	40.80	4.35	R
4948	7712	0.179148	CCGAAAAACGCATTAGGCCC	60.179	55.000	0.00	0.00	40.31	5.80	R
4951	7715	0.179148	GCCCCGAAAAACGCATTAGG	60.179	55.000	0.00	0.00	41.07	2.69	R
4955	7719	0.524414	GTTAGCCCCGAAAAACGCAT	59.476	50.000	0.00	0.00	41.07	4.73	R
4956	7720	0.535553	AGTTAGCCCCGAAAAACGCA	60.536	50.000	0.00	0.00	41.07	5.24	R
4957	7721	0.594602	AAGTTAGCCCCGAAAAACGC	59.405	50.000	0.00	0.00	41.07	4.84	R
4963	7727	0.766131	TGGTCAAAGTTAGCCCCGAA	59.234	50.000	0.00	0.00	0.00	4.30	R
5716	8485	1.055849	TTTGTCTGTCCAGCTAGCCA	58.944	50.000	12.13	0.64	0.00	4.75	R
6408	9247	0.165944	CATGTCGACAAGGGCGTTTC	59.834	55.000	24.13	0.00	0.00	2.78	R
6655	9496	1.084289	CCCGAGTCCCGTTTTTGATC	58.916	55.000	0.00	0.00	36.31	2.92	R
6687	9528	4.279420	CGATCATCTCATCCTACCTGTTCA	59.721	45.833	0.00	0.00	0.00	3.18	R
7017	9895	5.774690	AGCTGGATTAATTTGTTCTGTCCAA	59.225	36.000	0.00	0.00	34.21	3.53	R
7260	10148	2.265182	CCCAACCAACGTCGCCAAT	61.265	57.895	0.00	0.00	0.00	3.16	R
9284	14736	0.315568	TAAAAATGTGCACGTGCCCC	59.684	50.000	35.72	25.98	41.18	5.80	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
113	114	0.031313	TGGGTAGGGCACGGGTATAA	60.031	55.000	0.00	0.00	0.00	0.98
201	203	0.817013	CCAACATATGCGCAAGGGTT	59.183	50.000	17.11	16.00	38.28	4.11
218	220	4.748701	AGGGTTAGTAGTGTCAAAGGAGA	58.251	43.478	0.00	0.00	0.00	3.71
527	529	1.077787	CCATCCTTAACTGCGGGCA	60.078	57.895	0.00	0.00	0.00	5.36
540	542	1.160137	GCGGGCATGGTATGAATCTC	58.840	55.000	0.00	0.00	0.00	2.75
602	604	4.329545	TGAGGTGGTGAAGCCGGC	62.330	66.667	21.89	21.89	41.21	6.13
627	629	1.066787	GTCTTCCAGTTCTTCCCTCCG	60.067	57.143	0.00	0.00	0.00	4.63
667	669	1.144565	CTGTCCTGATCTTGCGCTCG	61.145	60.000	9.73	0.00	0.00	5.03
671	673	2.806856	CTGATCTTGCGCTCGCCAC	61.807	63.158	9.73	0.00	41.09	5.01
703	705	4.228438	TGAGAGTGGAGAGATGGAAGAGTA	59.772	45.833	0.00	0.00	0.00	2.59
744	746	0.178068	GGAGTTATGAGGGCGCTTCA	59.822	55.000	7.64	12.58	0.00	3.02
771	773	1.801512	CGCGACATCTCAAGCGTGA	60.802	57.895	0.00	1.47	46.48	4.35
777	779	2.423892	GACATCTCAAGCGTGACTCCTA	59.576	50.000	0.00	0.00	0.00	2.94
785	787	1.080772	CGTGACTCCTAGCGTGCAA	60.081	57.895	0.00	0.00	0.00	4.08
791	793	1.078759	CTCCTAGCGTGCAACCTTCG	61.079	60.000	0.00	0.00	0.00	3.79
804	806	2.444624	CCTTCGACATCCACGTGCG	61.445	63.158	10.91	8.18	0.00	5.34
817	819	2.391821	GTGCGTCGAGTTGCATCG	59.608	61.111	9.77	3.28	43.96	3.84
862	864	0.594284	CCGATTCGAGCGTTCCTACC	60.594	60.000	7.83	0.00	0.00	3.18
917	919	1.478105	GGCCAAGATTTAGGTGCAAGG	59.522	52.381	0.00	0.00	0.00	3.61
934	936	0.751643	AGGCAAGCAACCAAACGAGT	60.752	50.000	0.00	0.00	0.00	4.18
943	945	4.578928	AGCAACCAAACGAGTCAAAACTAT	59.421	37.500	0.00	0.00	35.28	2.12
953	955	6.573434	ACGAGTCAAAACTATATCATGCAGA	58.427	36.000	0.00	0.00	35.28	4.26
962	964	6.676990	ACTATATCATGCAGATCTGGTTGA	57.323	37.500	23.89	11.81	38.19	3.18
999	1001	1.670811	CAAACACGTCACAAGCTTCCT	59.329	47.619	0.00	0.00	0.00	3.36
1000	1002	1.583054	AACACGTCACAAGCTTCCTC	58.417	50.000	0.00	0.00	0.00	3.71
1003	1005	0.753262	ACGTCACAAGCTTCCTCTGT	59.247	50.000	0.00	0.00	0.00	3.41
1092	1095	0.317160	CAAAAGGCCCCTTCGGAAAC	59.683	55.000	0.00	0.00	34.84	2.78
1103	1106	4.570292	CCCCTTCGGAAACCCCTTAATTAA	60.570	45.833	0.00	0.00	0.00	1.40
1381	1384	1.342672	TGGGCCTCGTAAGGATTCCC	61.343	60.000	4.53	0.00	46.67	3.97
1843	1855	2.189594	AGCTGCACTATCTTTGCACA	57.810	45.000	1.02	0.00	45.06	4.57
1924	2018	8.759641	CATTATTCGTTGATAAGAGACTTCAGG	58.240	37.037	0.00	0.00	0.00	3.86
1949	2043	3.068165	TCTGCTGAGAAAAACACTCGAGA	59.932	43.478	21.68	0.00	37.22	4.04
2013	3419	8.423906	TCCTTTGGTATCTCTCTGTAATATCC	57.576	38.462	0.00	0.00	0.00	2.59
2099	3511	9.232473	CTTTAAGAATAACAAGAAGGCTTAGGT	57.768	33.333	0.00	0.00	31.81	3.08
2312	3775	4.587262	AGGGTAGCACATCACATCGTATTA	59.413	41.667	0.00	0.00	0.00	0.98
2450	3914	0.670854	GTCTTGGTTGTCGAGAGGGC	60.671	60.000	0.00	0.00	36.61	5.19
2463	3927	1.767681	GAGAGGGCCACAATCATCTCT	59.232	52.381	6.18	4.06	34.70	3.10
2499	3963	2.608546	CTGCACCATGTGTTTTGTTTGG	59.391	45.455	0.00	0.00	35.75	3.28
2583	4047	2.653726	TGGCATCTGTTGACTGTTGTT	58.346	42.857	0.00	0.00	32.91	2.83
2597	4061	0.508213	GTTGTTGCCGAATTGCTTGC	59.492	50.000	0.00	0.00	0.00	4.01
2903	4431	9.844790	TTTGATAAAGTGCAAAACATAGAGATG	57.155	29.630	0.00	0.00	39.16	2.90
2932	4460	6.438425	AGGGCAATTTGAGAAACATTATGTCT	59.562	34.615	0.00	0.00	0.00	3.41
3020	4548	5.684704	ACTCCATAGTCCCATAACAACATG	58.315	41.667	0.00	0.00	0.00	3.21
3145	4785	2.947652	CAGGCCCATCAGTTTGTCATAG	59.052	50.000	0.00	0.00	0.00	2.23
3224	4959	4.885426	CATCCCGATGGGTTCCTG	57.115	61.111	1.04	0.00	44.74	3.86
3225	4960	1.915228	CATCCCGATGGGTTCCTGT	59.085	57.895	1.04	0.00	44.74	4.00
3226	4961	0.179045	CATCCCGATGGGTTCCTGTC	60.179	60.000	1.04	0.00	44.74	3.51
3227	4962	0.326618	ATCCCGATGGGTTCCTGTCT	60.327	55.000	1.04	0.00	44.74	3.41
3519	5262	3.169099	AGCACAGTACCTCATCAGAAGT	58.831	45.455	0.00	0.00	0.00	3.01
3520	5263	3.580458	AGCACAGTACCTCATCAGAAGTT	59.420	43.478	0.00	0.00	0.00	2.66
3890	5634	4.413928	GGCAACCTGGTGCATGTA	57.586	55.556	18.44	0.00	46.81	2.29
3891	5635	2.183409	GGCAACCTGGTGCATGTAG	58.817	57.895	18.44	0.00	46.81	2.74
3892	5636	1.508088	GCAACCTGGTGCATGTAGC	59.492	57.895	6.00	6.00	44.29	3.58
3893	5637	0.962356	GCAACCTGGTGCATGTAGCT	60.962	55.000	14.15	0.00	44.29	3.32
3894	5638	1.089920	CAACCTGGTGCATGTAGCTC	58.910	55.000	14.15	0.00	45.94	4.09
3900	5644	1.450312	GTGCATGTAGCTCCCGCTT	60.450	57.895	0.00	0.00	46.47	4.68
3901	5645	1.450134	TGCATGTAGCTCCCGCTTG	60.450	57.895	0.00	0.00	46.47	4.01
3902	5646	2.828128	GCATGTAGCTCCCGCTTGC	61.828	63.158	0.00	0.00	46.47	4.01
3903	5647	2.202932	ATGTAGCTCCCGCTTGCG	60.203	61.111	8.14	8.14	46.47	4.85
3906	5650	4.819761	TAGCTCCCGCTTGCGCAG	62.820	66.667	11.31	6.32	46.47	5.18
3918	5662	4.785453	GCGCAGGGTCCAGGGAAG	62.785	72.222	0.30	0.00	0.00	3.46
3919	5663	4.101448	CGCAGGGTCCAGGGAAGG	62.101	72.222	0.00	0.00	0.00	3.46
3920	5664	3.732849	GCAGGGTCCAGGGAAGGG	61.733	72.222	0.00	0.00	0.00	3.95
3921	5665	2.204151	CAGGGTCCAGGGAAGGGT	60.204	66.667	0.00	0.00	0.00	4.34
3922	5666	2.125225	AGGGTCCAGGGAAGGGTC	59.875	66.667	0.00	0.00	0.00	4.46
3923	5667	3.015753	GGGTCCAGGGAAGGGTCC	61.016	72.222	0.00	0.00	44.10	4.46
3924	5668	3.400054	GGTCCAGGGAAGGGTCCG	61.400	72.222	0.00	0.00	46.04	4.79
3925	5669	2.284405	GTCCAGGGAAGGGTCCGA	60.284	66.667	0.00	0.00	46.04	4.55
3926	5670	2.284405	TCCAGGGAAGGGTCCGAC	60.284	66.667	0.00	0.00	46.04	4.79
3927	5671	3.400054	CCAGGGAAGGGTCCGACC	61.400	72.222	9.30	9.30	46.04	4.79
3928	5672	2.606519	CAGGGAAGGGTCCGACCA	60.607	66.667	19.43	0.00	46.04	4.02
3929	5673	2.606826	AGGGAAGGGTCCGACCAC	60.607	66.667	19.43	8.70	46.04	4.16
3930	5674	2.606826	GGGAAGGGTCCGACCACT	60.607	66.667	19.43	10.80	46.04	4.00
3931	5675	2.222013	GGGAAGGGTCCGACCACTT	61.222	63.158	19.43	17.88	46.04	3.16
3932	5676	1.759236	GGAAGGGTCCGACCACTTT	59.241	57.895	19.43	9.96	41.02	2.66
3933	5677	0.605589	GGAAGGGTCCGACCACTTTG	60.606	60.000	19.43	0.00	41.02	2.77
3934	5678	0.605589	GAAGGGTCCGACCACTTTGG	60.606	60.000	19.43	0.00	41.02	3.28
3935	5679	2.033602	GGGTCCGACCACTTTGGG	59.966	66.667	19.43	0.00	43.37	4.12
3936	5680	2.826003	GGGTCCGACCACTTTGGGT	61.826	63.158	19.43	0.00	43.37	4.51
3946	5690	4.996788	ACCACTTTGGGTCTATAGTACG	57.003	45.455	0.00	0.00	43.37	3.67
3947	5691	3.131755	ACCACTTTGGGTCTATAGTACGC	59.868	47.826	0.00	6.13	43.37	4.42
3948	5692	3.131577	CCACTTTGGGTCTATAGTACGCA	59.868	47.826	13.98	13.98	37.94	5.24
3949	5693	4.360563	CACTTTGGGTCTATAGTACGCAG	58.639	47.826	16.00	11.29	40.36	5.18
3950	5694	3.181478	ACTTTGGGTCTATAGTACGCAGC	60.181	47.826	16.00	2.07	40.36	5.25
3951	5695	1.325355	TGGGTCTATAGTACGCAGCC	58.675	55.000	13.98	8.23	35.18	4.85
3952	5696	1.133575	TGGGTCTATAGTACGCAGCCT	60.134	52.381	13.98	0.00	35.18	4.58
3953	5697	1.962100	GGGTCTATAGTACGCAGCCTT	59.038	52.381	0.00	0.00	0.00	4.35
3954	5698	2.364647	GGGTCTATAGTACGCAGCCTTT	59.635	50.000	0.00	0.00	0.00	3.11
3955	5699	3.552478	GGGTCTATAGTACGCAGCCTTTC	60.552	52.174	0.00	0.00	0.00	2.62
3956	5700	3.552478	GGTCTATAGTACGCAGCCTTTCC	60.552	52.174	0.00	0.00	0.00	3.13
3957	5701	2.626743	TCTATAGTACGCAGCCTTTCCC	59.373	50.000	0.00	0.00	0.00	3.97
3958	5702	1.497161	ATAGTACGCAGCCTTTCCCT	58.503	50.000	0.00	0.00	0.00	4.20
3959	5703	2.148446	TAGTACGCAGCCTTTCCCTA	57.852	50.000	0.00	0.00	0.00	3.53
3960	5704	0.535797	AGTACGCAGCCTTTCCCTAC	59.464	55.000	0.00	0.00	0.00	3.18
3961	5705	0.248289	GTACGCAGCCTTTCCCTACA	59.752	55.000	0.00	0.00	0.00	2.74
3962	5706	1.134491	GTACGCAGCCTTTCCCTACAT	60.134	52.381	0.00	0.00	0.00	2.29
3963	5707	0.328258	ACGCAGCCTTTCCCTACATT	59.672	50.000	0.00	0.00	0.00	2.71
3964	5708	1.271926	ACGCAGCCTTTCCCTACATTT	60.272	47.619	0.00	0.00	0.00	2.32
3965	5709	1.401905	CGCAGCCTTTCCCTACATTTC	59.598	52.381	0.00	0.00	0.00	2.17
3966	5710	2.728007	GCAGCCTTTCCCTACATTTCT	58.272	47.619	0.00	0.00	0.00	2.52
3967	5711	2.424956	GCAGCCTTTCCCTACATTTCTG	59.575	50.000	0.00	0.00	0.00	3.02
3968	5712	3.690460	CAGCCTTTCCCTACATTTCTGT	58.310	45.455	0.00	0.00	39.49	3.41
3969	5713	4.843728	CAGCCTTTCCCTACATTTCTGTA	58.156	43.478	0.00	0.00	36.79	2.74
3970	5714	5.253330	CAGCCTTTCCCTACATTTCTGTAA	58.747	41.667	0.00	0.00	37.41	2.41
3971	5715	5.355350	CAGCCTTTCCCTACATTTCTGTAAG	59.645	44.000	0.00	0.00	37.41	2.34
3972	5716	5.250774	AGCCTTTCCCTACATTTCTGTAAGA	59.749	40.000	0.00	0.00	44.68	2.10
3984	5728	3.685139	TCTGTAAGAGGCTGTTTCCAG	57.315	47.619	0.90	9.48	38.67	3.86
3985	5729	2.303022	TCTGTAAGAGGCTGTTTCCAGG	59.697	50.000	17.71	5.83	38.67	4.45
3986	5730	2.303022	CTGTAAGAGGCTGTTTCCAGGA	59.697	50.000	0.90	0.00	35.89	3.86
3987	5731	2.038557	TGTAAGAGGCTGTTTCCAGGAC	59.961	50.000	0.90	0.00	39.22	3.85
3988	5732	1.439543	AAGAGGCTGTTTCCAGGACT	58.560	50.000	0.00	0.00	39.22	3.85
3989	5733	1.439543	AGAGGCTGTTTCCAGGACTT	58.560	50.000	0.00	0.00	39.22	3.01
3990	5734	1.072965	AGAGGCTGTTTCCAGGACTTG	59.927	52.381	0.00	0.00	39.22	3.16
3991	5735	1.072331	GAGGCTGTTTCCAGGACTTGA	59.928	52.381	0.00	0.00	39.22	3.02
3992	5736	1.494721	AGGCTGTTTCCAGGACTTGAA	59.505	47.619	0.00	0.00	39.22	2.69
3993	5737	1.609072	GGCTGTTTCCAGGACTTGAAC	59.391	52.381	0.00	0.00	39.22	3.18
3994	5738	1.609072	GCTGTTTCCAGGACTTGAACC	59.391	52.381	0.00	0.00	39.22	3.62
3995	5739	2.230660	CTGTTTCCAGGACTTGAACCC	58.769	52.381	0.00	0.00	34.90	4.11
3996	5740	1.566703	TGTTTCCAGGACTTGAACCCA	59.433	47.619	0.00	0.00	0.00	4.51
3997	5741	2.176798	TGTTTCCAGGACTTGAACCCAT	59.823	45.455	0.00	0.00	0.00	4.00
3998	5742	2.558359	GTTTCCAGGACTTGAACCCATG	59.442	50.000	0.00	0.00	0.00	3.66
3999	5743	1.741028	TCCAGGACTTGAACCCATGA	58.259	50.000	0.00	0.00	0.00	3.07
4000	5744	1.351017	TCCAGGACTTGAACCCATGAC	59.649	52.381	0.00	0.00	0.00	3.06
4001	5745	1.614317	CCAGGACTTGAACCCATGACC	60.614	57.143	0.00	0.00	34.29	4.02
4002	5746	1.352352	CAGGACTTGAACCCATGACCT	59.648	52.381	0.00	0.00	40.96	3.85
4003	5747	1.630878	AGGACTTGAACCCATGACCTC	59.369	52.381	0.00	0.00	37.82	3.85
4004	5748	1.351017	GGACTTGAACCCATGACCTCA	59.649	52.381	0.00	0.00	32.45	3.86
4005	5749	2.025887	GGACTTGAACCCATGACCTCAT	60.026	50.000	0.00	0.00	36.96	2.90
4017	5761	2.154139	ACCTCATGGTCACAAGGCA	58.846	52.632	0.00	0.00	44.78	4.75
4018	5762	0.037303	ACCTCATGGTCACAAGGCAG	59.963	55.000	0.00	0.00	44.78	4.85
4019	5763	1.310933	CCTCATGGTCACAAGGCAGC	61.311	60.000	0.00	0.00	0.00	5.25
4020	5764	0.607217	CTCATGGTCACAAGGCAGCA	60.607	55.000	0.00	0.00	0.00	4.41
4021	5765	0.607217	TCATGGTCACAAGGCAGCAG	60.607	55.000	0.00	0.00	0.00	4.24
4022	5766	1.975407	ATGGTCACAAGGCAGCAGC	60.975	57.895	0.00	0.00	41.10	5.25
4023	5767	2.282040	GGTCACAAGGCAGCAGCT	60.282	61.111	0.00	0.00	41.70	4.24
4024	5768	1.900498	GGTCACAAGGCAGCAGCTT	60.900	57.895	0.00	0.00	41.70	3.74
4025	5769	1.458639	GGTCACAAGGCAGCAGCTTT	61.459	55.000	0.00	0.00	41.17	3.51
4026	5770	1.238439	GTCACAAGGCAGCAGCTTTA	58.762	50.000	0.00	0.00	38.07	1.85
4027	5771	1.068954	GTCACAAGGCAGCAGCTTTAC	60.069	52.381	0.00	0.00	38.07	2.01
4028	5772	0.242017	CACAAGGCAGCAGCTTTACC	59.758	55.000	0.00	0.00	38.07	2.85
4029	5773	0.178992	ACAAGGCAGCAGCTTTACCA	60.179	50.000	0.00	0.00	38.07	3.25
4030	5774	0.242017	CAAGGCAGCAGCTTTACCAC	59.758	55.000	0.00	0.00	38.07	4.16
4031	5775	0.111253	AAGGCAGCAGCTTTACCACT	59.889	50.000	0.00	0.00	38.40	4.00
4032	5776	0.984230	AGGCAGCAGCTTTACCACTA	59.016	50.000	0.00	0.00	41.70	2.74
4033	5777	1.087501	GGCAGCAGCTTTACCACTAC	58.912	55.000	0.00	0.00	41.70	2.73
4034	5778	0.721718	GCAGCAGCTTTACCACTACG	59.278	55.000	0.00	0.00	37.91	3.51
4035	5779	0.721718	CAGCAGCTTTACCACTACGC	59.278	55.000	0.00	0.00	0.00	4.42
4036	5780	0.391263	AGCAGCTTTACCACTACGCC	60.391	55.000	0.00	0.00	0.00	5.68
4037	5781	0.672401	GCAGCTTTACCACTACGCCA	60.672	55.000	0.00	0.00	0.00	5.69
4038	5782	1.803334	CAGCTTTACCACTACGCCAA	58.197	50.000	0.00	0.00	0.00	4.52
4039	5783	1.732259	CAGCTTTACCACTACGCCAAG	59.268	52.381	0.00	0.00	0.00	3.61
4040	5784	1.084289	GCTTTACCACTACGCCAAGG	58.916	55.000	0.00	0.00	0.00	3.61
4041	5785	1.084289	CTTTACCACTACGCCAAGGC	58.916	55.000	0.00	0.00	37.85	4.35
4042	5786	0.688487	TTTACCACTACGCCAAGGCT	59.312	50.000	9.73	0.00	39.32	4.58
4043	5787	0.248289	TTACCACTACGCCAAGGCTC	59.752	55.000	9.73	0.00	39.32	4.70
4044	5788	1.610554	TACCACTACGCCAAGGCTCC	61.611	60.000	9.73	0.00	39.32	4.70
4045	5789	2.125106	CACTACGCCAAGGCTCCC	60.125	66.667	9.73	0.00	39.32	4.30
4046	5790	3.400054	ACTACGCCAAGGCTCCCC	61.400	66.667	9.73	0.00	39.32	4.81
4047	5791	3.083997	CTACGCCAAGGCTCCCCT	61.084	66.667	9.73	0.00	45.77	4.79
4055	5799	2.128226	AGGCTCCCCTTCCACCAT	59.872	61.111	0.00	0.00	38.74	3.55
4056	5800	2.276740	GGCTCCCCTTCCACCATG	59.723	66.667	0.00	0.00	0.00	3.66
4057	5801	2.276740	GCTCCCCTTCCACCATGG	59.723	66.667	11.19	11.19	39.43	3.66
4058	5802	2.308722	GCTCCCCTTCCACCATGGA	61.309	63.158	21.47	0.00	46.61	3.41
4365	6236	2.336667	CAAGTTTGGGCGCCAATTTAG	58.663	47.619	30.85	8.20	43.55	1.85
4394	6265	2.890311	CCAAACCTTGCAATCAGGTACA	59.110	45.455	8.99	0.00	34.39	2.90
4395	6266	3.057315	CCAAACCTTGCAATCAGGTACAG	60.057	47.826	8.99	2.88	34.39	2.74
4620	6491	6.982724	TGCATAGATACAACAACTCTGATCTG	59.017	38.462	0.00	0.00	0.00	2.90
4643	6514	3.788227	AAACCTCACCACAATAGCAGA	57.212	42.857	0.00	0.00	0.00	4.26
4930	7694	8.397575	TGTGTGAAGTAGATCAGATATACTCC	57.602	38.462	16.47	6.36	36.36	3.85
4931	7695	7.448777	TGTGTGAAGTAGATCAGATATACTCCC	59.551	40.741	16.47	12.29	36.36	4.30
4932	7696	7.668052	GTGTGAAGTAGATCAGATATACTCCCT	59.332	40.741	16.47	3.33	36.36	4.20
4933	7697	7.885922	TGTGAAGTAGATCAGATATACTCCCTC	59.114	40.741	16.47	11.70	36.36	4.30
4934	7698	7.338449	GTGAAGTAGATCAGATATACTCCCTCC	59.662	44.444	16.47	6.44	36.36	4.30
4935	7699	7.240828	TGAAGTAGATCAGATATACTCCCTCCT	59.759	40.741	16.47	2.01	36.36	3.69
4936	7700	7.597850	AGTAGATCAGATATACTCCCTCCTT	57.402	40.000	11.35	0.00	32.16	3.36
4937	7701	7.639378	AGTAGATCAGATATACTCCCTCCTTC	58.361	42.308	11.35	0.00	32.16	3.46
4938	7702	5.837829	AGATCAGATATACTCCCTCCTTCC	58.162	45.833	0.00	0.00	0.00	3.46
4939	7703	5.317262	AGATCAGATATACTCCCTCCTTCCA	59.683	44.000	0.00	0.00	0.00	3.53
4940	7704	5.623551	TCAGATATACTCCCTCCTTCCAT	57.376	43.478	0.00	0.00	0.00	3.41
4941	7705	5.584913	TCAGATATACTCCCTCCTTCCATC	58.415	45.833	0.00	0.00	0.00	3.51
4942	7706	5.317262	TCAGATATACTCCCTCCTTCCATCT	59.683	44.000	0.00	0.00	0.00	2.90
4943	7707	6.509280	TCAGATATACTCCCTCCTTCCATCTA	59.491	42.308	0.00	0.00	0.00	1.98
4944	7708	7.187336	TCAGATATACTCCCTCCTTCCATCTAT	59.813	40.741	0.00	0.00	0.00	1.98
4945	7709	8.506921	CAGATATACTCCCTCCTTCCATCTATA	58.493	40.741	0.00	0.00	0.00	1.31
4946	7710	9.260884	AGATATACTCCCTCCTTCCATCTATAT	57.739	37.037	0.00	0.00	0.00	0.86
4949	7713	6.098716	ACTCCCTCCTTCCATCTATATAGG	57.901	45.833	9.89	0.00	0.00	2.57
4950	7714	5.042979	ACTCCCTCCTTCCATCTATATAGGG	60.043	48.000	9.89	4.49	43.23	3.53
4951	7715	3.970640	CCCTCCTTCCATCTATATAGGGC	59.029	52.174	9.89	0.00	36.30	5.19
4952	7716	3.970640	CCTCCTTCCATCTATATAGGGCC	59.029	52.174	9.89	0.00	0.00	5.80
4953	7717	4.327332	CCTCCTTCCATCTATATAGGGCCT	60.327	50.000	12.58	12.58	0.00	5.19
4954	7718	5.103043	CCTCCTTCCATCTATATAGGGCCTA	60.103	48.000	17.16	17.16	0.00	3.93
4955	7719	6.432190	TCCTTCCATCTATATAGGGCCTAA	57.568	41.667	18.91	7.61	0.00	2.69
4956	7720	7.009960	TCCTTCCATCTATATAGGGCCTAAT	57.990	40.000	18.91	14.19	0.00	1.73
4957	7721	6.846505	TCCTTCCATCTATATAGGGCCTAATG	59.153	42.308	18.91	15.42	0.00	1.90
4958	7722	6.465035	CCTTCCATCTATATAGGGCCTAATGC	60.465	46.154	18.91	0.00	40.16	3.56
4959	7723	4.588951	TCCATCTATATAGGGCCTAATGCG	59.411	45.833	18.91	10.04	42.61	4.73
4960	7724	4.345257	CCATCTATATAGGGCCTAATGCGT	59.655	45.833	18.91	2.76	42.61	5.24
4961	7725	5.163301	CCATCTATATAGGGCCTAATGCGTT	60.163	44.000	18.91	1.94	42.61	4.84
4962	7726	6.349300	CATCTATATAGGGCCTAATGCGTTT	58.651	40.000	18.91	1.12	42.61	3.60
4963	7727	6.368779	TCTATATAGGGCCTAATGCGTTTT	57.631	37.500	18.91	0.30	42.61	2.43
4964	7728	6.775708	TCTATATAGGGCCTAATGCGTTTTT	58.224	36.000	18.91	0.00	42.61	1.94
4965	7729	5.959618	ATATAGGGCCTAATGCGTTTTTC	57.040	39.130	18.91	0.00	42.61	2.29
4966	7730	0.808755	AGGGCCTAATGCGTTTTTCG	59.191	50.000	2.82	0.00	42.61	3.46
4967	7731	0.179148	GGGCCTAATGCGTTTTTCGG	60.179	55.000	0.84	0.00	42.61	4.30
4968	7732	0.179148	GGCCTAATGCGTTTTTCGGG	60.179	55.000	0.00	0.00	42.61	5.14
4969	7733	0.179148	GCCTAATGCGTTTTTCGGGG	60.179	55.000	0.00	0.00	40.26	5.73
4970	7734	0.179148	CCTAATGCGTTTTTCGGGGC	60.179	55.000	0.00	0.00	40.26	5.80
4971	7735	0.808755	CTAATGCGTTTTTCGGGGCT	59.191	50.000	0.00	0.00	40.26	5.19
4972	7736	2.011222	CTAATGCGTTTTTCGGGGCTA	58.989	47.619	0.00	0.00	40.26	3.93
4973	7737	1.249407	AATGCGTTTTTCGGGGCTAA	58.751	45.000	0.00	0.00	40.26	3.09
4974	7738	0.524414	ATGCGTTTTTCGGGGCTAAC	59.476	50.000	0.00	0.00	40.26	2.34
4975	7739	0.535553	TGCGTTTTTCGGGGCTAACT	60.536	50.000	0.00	0.00	40.26	2.24
4976	7740	0.594602	GCGTTTTTCGGGGCTAACTT	59.405	50.000	0.00	0.00	40.26	2.66
4977	7741	1.001048	GCGTTTTTCGGGGCTAACTTT	60.001	47.619	0.00	0.00	40.26	2.66
4978	7742	2.657184	CGTTTTTCGGGGCTAACTTTG	58.343	47.619	0.00	0.00	35.71	2.77
4979	7743	2.291190	CGTTTTTCGGGGCTAACTTTGA	59.709	45.455	0.00	0.00	35.71	2.69
4980	7744	3.635331	GTTTTTCGGGGCTAACTTTGAC	58.365	45.455	0.00	0.00	0.00	3.18
4981	7745	1.900245	TTTCGGGGCTAACTTTGACC	58.100	50.000	0.00	0.00	0.00	4.02
4982	7746	0.766131	TTCGGGGCTAACTTTGACCA	59.234	50.000	0.00	0.00	0.00	4.02
4983	7747	0.766131	TCGGGGCTAACTTTGACCAA	59.234	50.000	0.00	0.00	0.00	3.67
4984	7748	1.143277	TCGGGGCTAACTTTGACCAAA	59.857	47.619	0.00	0.00	0.00	3.28
4985	7749	2.167662	CGGGGCTAACTTTGACCAAAT	58.832	47.619	0.00	0.00	0.00	2.32
4986	7750	3.009253	TCGGGGCTAACTTTGACCAAATA	59.991	43.478	0.00	0.00	0.00	1.40
4987	7751	3.951680	CGGGGCTAACTTTGACCAAATAT	59.048	43.478	0.00	0.00	0.00	1.28
4988	7752	4.401202	CGGGGCTAACTTTGACCAAATATT	59.599	41.667	0.00	0.00	0.00	1.28
4989	7753	5.591067	CGGGGCTAACTTTGACCAAATATTA	59.409	40.000	0.00	0.00	0.00	0.98
4990	7754	6.238648	CGGGGCTAACTTTGACCAAATATTAG	60.239	42.308	15.32	15.32	34.88	1.73
4991	7755	6.831868	GGGGCTAACTTTGACCAAATATTAGA	59.168	38.462	19.82	0.15	34.31	2.10
4992	7756	7.013369	GGGGCTAACTTTGACCAAATATTAGAG	59.987	40.741	19.82	7.39	34.31	2.43
4993	7757	7.418408	GGCTAACTTTGACCAAATATTAGAGC	58.582	38.462	19.82	13.12	34.31	4.09
4994	7758	7.067008	GGCTAACTTTGACCAAATATTAGAGCA	59.933	37.037	19.82	0.00	34.31	4.26
4995	7759	8.458843	GCTAACTTTGACCAAATATTAGAGCAA	58.541	33.333	19.82	0.00	34.31	3.91
5014	7778	8.859236	AGAGCAATAATATATGACATGCAACT	57.141	30.769	10.78	7.52	34.89	3.16
5015	7779	9.293404	AGAGCAATAATATATGACATGCAACTT	57.707	29.630	10.78	0.00	34.89	2.66
5024	7788	3.963665	TGACATGCAACTTACACAAAGC	58.036	40.909	0.00	0.00	38.93	3.51
5025	7789	3.379688	TGACATGCAACTTACACAAAGCA	59.620	39.130	0.00	0.00	38.93	3.91
5026	7790	3.705604	ACATGCAACTTACACAAAGCAC	58.294	40.909	0.00	0.00	38.93	4.40
5027	7791	3.130164	ACATGCAACTTACACAAAGCACA	59.870	39.130	0.00	0.00	38.93	4.57
5028	7792	3.143807	TGCAACTTACACAAAGCACAC	57.856	42.857	0.00	0.00	38.93	3.82
5029	7793	2.159310	TGCAACTTACACAAAGCACACC	60.159	45.455	0.00	0.00	38.93	4.16
5030	7794	2.715268	CAACTTACACAAAGCACACCG	58.285	47.619	0.00	0.00	38.93	4.94
5031	7795	2.032680	ACTTACACAAAGCACACCGT	57.967	45.000	0.00	0.00	38.93	4.83
5032	7796	2.361789	ACTTACACAAAGCACACCGTT	58.638	42.857	0.00	0.00	38.93	4.44
5033	7797	3.533547	ACTTACACAAAGCACACCGTTA	58.466	40.909	0.00	0.00	38.93	3.18
5034	7798	3.940221	ACTTACACAAAGCACACCGTTAA	59.060	39.130	0.00	0.00	38.93	2.01
5035	7799	4.395542	ACTTACACAAAGCACACCGTTAAA	59.604	37.500	0.00	0.00	38.93	1.52
5036	7800	5.066764	ACTTACACAAAGCACACCGTTAAAT	59.933	36.000	0.00	0.00	38.93	1.40
5037	7801	4.379339	ACACAAAGCACACCGTTAAATT	57.621	36.364	0.00	0.00	0.00	1.82
5038	7802	4.356289	ACACAAAGCACACCGTTAAATTC	58.644	39.130	0.00	0.00	0.00	2.17
5039	7803	3.420576	CACAAAGCACACCGTTAAATTCG	59.579	43.478	0.00	0.00	0.00	3.34
5040	7804	3.065648	ACAAAGCACACCGTTAAATTCGT	59.934	39.130	0.00	0.00	0.00	3.85
5041	7805	2.961522	AGCACACCGTTAAATTCGTG	57.038	45.000	0.00	0.00	0.00	4.35
5042	7806	2.215196	AGCACACCGTTAAATTCGTGT	58.785	42.857	0.00	0.00	0.00	4.49
5043	7807	2.032377	AGCACACCGTTAAATTCGTGTG	60.032	45.455	13.39	13.39	40.02	3.82
5044	7808	2.286536	GCACACCGTTAAATTCGTGTGT	60.287	45.455	17.54	12.66	40.37	3.72
5045	7809	3.284914	CACACCGTTAAATTCGTGTGTG	58.715	45.455	17.05	17.05	44.50	3.82
5046	7810	3.196463	ACACCGTTAAATTCGTGTGTGA	58.804	40.909	9.71	0.00	39.31	3.58
5047	7811	3.622163	ACACCGTTAAATTCGTGTGTGAA	59.378	39.130	9.71	0.00	39.31	3.18
5048	7812	4.094590	ACACCGTTAAATTCGTGTGTGAAA	59.905	37.500	9.71	0.00	39.31	2.69
5049	7813	4.668837	CACCGTTAAATTCGTGTGTGAAAG	59.331	41.667	0.00	0.00	0.00	2.62
5050	7814	4.215965	CCGTTAAATTCGTGTGTGAAAGG	58.784	43.478	0.00	0.00	0.00	3.11
5051	7815	4.024725	CCGTTAAATTCGTGTGTGAAAGGA	60.025	41.667	0.00	0.00	0.00	3.36
5052	7816	5.137403	CGTTAAATTCGTGTGTGAAAGGAG	58.863	41.667	0.00	0.00	0.00	3.69
5053	7817	3.626028	AAATTCGTGTGTGAAAGGAGC	57.374	42.857	0.00	0.00	0.00	4.70
5054	7818	2.550830	ATTCGTGTGTGAAAGGAGCT	57.449	45.000	0.00	0.00	0.00	4.09
5055	7819	2.325583	TTCGTGTGTGAAAGGAGCTT	57.674	45.000	0.00	0.00	0.00	3.74
5056	7820	2.325583	TCGTGTGTGAAAGGAGCTTT	57.674	45.000	0.00	0.00	36.29	3.51
5057	7821	2.210116	TCGTGTGTGAAAGGAGCTTTC	58.790	47.619	0.00	0.00	46.88	2.62
5085	7849	8.355272	TGATATAATTTTCACATTGTGCATGC	57.645	30.769	11.82	11.82	36.14	4.06
5086	7850	7.438757	TGATATAATTTTCACATTGTGCATGCC	59.561	33.333	16.68	7.25	36.14	4.40
5087	7851	2.904697	TTTTCACATTGTGCATGCCA	57.095	40.000	16.68	10.08	36.14	4.92
5088	7852	3.404224	TTTTCACATTGTGCATGCCAT	57.596	38.095	16.68	1.38	36.14	4.40
5089	7853	2.371910	TTCACATTGTGCATGCCATG	57.628	45.000	16.68	16.41	36.14	3.66
5090	7854	1.258676	TCACATTGTGCATGCCATGT	58.741	45.000	16.68	17.05	36.14	3.21
5091	7855	2.444421	TCACATTGTGCATGCCATGTA	58.556	42.857	20.74	0.00	36.14	2.29
5092	7856	2.164017	TCACATTGTGCATGCCATGTAC	59.836	45.455	17.68	17.68	44.71	2.90
5093	7857	2.164827	CACATTGTGCATGCCATGTACT	59.835	45.455	23.39	4.84	44.74	2.73
5094	7858	3.377798	CACATTGTGCATGCCATGTACTA	59.622	43.478	23.39	17.76	44.74	1.82
5095	7859	4.037089	CACATTGTGCATGCCATGTACTAT	59.963	41.667	23.39	19.05	44.74	2.12
5096	7860	4.646040	ACATTGTGCATGCCATGTACTATT	59.354	37.500	23.39	11.39	44.74	1.73
5097	7861	5.827267	ACATTGTGCATGCCATGTACTATTA	59.173	36.000	23.39	9.41	44.74	0.98
5098	7862	6.320926	ACATTGTGCATGCCATGTACTATTAA	59.679	34.615	23.39	11.90	44.74	1.40
5099	7863	6.957920	TTGTGCATGCCATGTACTATTAAT	57.042	33.333	23.39	0.00	44.74	1.40
5100	7864	6.558771	TGTGCATGCCATGTACTATTAATC	57.441	37.500	23.39	0.00	44.74	1.75
5101	7865	6.298361	TGTGCATGCCATGTACTATTAATCT	58.702	36.000	23.39	0.00	44.74	2.40
5102	7866	6.772233	TGTGCATGCCATGTACTATTAATCTT	59.228	34.615	23.39	0.00	44.74	2.40
5103	7867	7.080099	GTGCATGCCATGTACTATTAATCTTG	58.920	38.462	17.31	0.00	41.79	3.02
5104	7868	6.772233	TGCATGCCATGTACTATTAATCTTGT	59.228	34.615	16.68	0.00	0.00	3.16
5105	7869	7.041167	TGCATGCCATGTACTATTAATCTTGTC	60.041	37.037	16.68	0.00	0.00	3.18
5106	7870	7.041167	GCATGCCATGTACTATTAATCTTGTCA	60.041	37.037	6.36	0.00	0.00	3.58
5107	7871	8.839343	CATGCCATGTACTATTAATCTTGTCAA	58.161	33.333	0.00	0.00	0.00	3.18
5108	7872	8.978874	TGCCATGTACTATTAATCTTGTCAAT	57.021	30.769	0.00	0.00	0.00	2.57
5120	7884	6.824305	AATCTTGTCAATAGTCAAAGGTGG	57.176	37.500	0.00	0.00	0.00	4.61
5121	7885	5.304686	TCTTGTCAATAGTCAAAGGTGGT	57.695	39.130	0.00	0.00	0.00	4.16
5122	7886	5.305585	TCTTGTCAATAGTCAAAGGTGGTC	58.694	41.667	0.00	0.00	0.00	4.02
5123	7887	4.974645	TGTCAATAGTCAAAGGTGGTCT	57.025	40.909	0.00	0.00	0.00	3.85
5124	7888	5.304686	TGTCAATAGTCAAAGGTGGTCTT	57.695	39.130	0.00	0.00	37.28	3.01
5125	7889	6.428083	TGTCAATAGTCAAAGGTGGTCTTA	57.572	37.500	0.00	0.00	34.78	2.10
5126	7890	6.833041	TGTCAATAGTCAAAGGTGGTCTTAA	58.167	36.000	0.00	0.00	34.78	1.85
5127	7891	7.284074	TGTCAATAGTCAAAGGTGGTCTTAAA	58.716	34.615	0.00	0.00	34.78	1.52
5128	7892	7.776030	TGTCAATAGTCAAAGGTGGTCTTAAAA	59.224	33.333	0.00	0.00	34.78	1.52
5129	7893	8.626526	GTCAATAGTCAAAGGTGGTCTTAAAAA	58.373	33.333	0.00	0.00	34.78	1.94
5150	7914	6.368779	AAAACGCATTAGGCCCTATATAGA	57.631	37.500	11.53	0.00	40.31	1.98
5151	7915	6.561519	AAACGCATTAGGCCCTATATAGAT	57.438	37.500	11.53	0.00	40.31	1.98
5152	7916	5.537300	ACGCATTAGGCCCTATATAGATG	57.463	43.478	11.53	6.87	40.31	2.90
5153	7917	4.345257	ACGCATTAGGCCCTATATAGATGG	59.655	45.833	11.53	6.04	40.31	3.51
5154	7918	4.588951	CGCATTAGGCCCTATATAGATGGA	59.411	45.833	11.53	0.00	40.31	3.41
5155	7919	5.070446	CGCATTAGGCCCTATATAGATGGAA	59.930	44.000	11.53	0.00	40.31	3.53
5156	7920	6.529220	GCATTAGGCCCTATATAGATGGAAG	58.471	44.000	11.53	0.00	36.11	3.46
5157	7921	6.465035	GCATTAGGCCCTATATAGATGGAAGG	60.465	46.154	11.53	3.94	36.11	3.46
5158	7922	4.994411	AGGCCCTATATAGATGGAAGGA	57.006	45.455	11.53	0.00	0.00	3.36
5159	7923	4.889780	AGGCCCTATATAGATGGAAGGAG	58.110	47.826	11.53	0.00	0.00	3.69
5160	7924	3.970640	GGCCCTATATAGATGGAAGGAGG	59.029	52.174	11.53	1.87	0.00	4.30
5161	7925	3.970640	GCCCTATATAGATGGAAGGAGGG	59.029	52.174	11.53	3.52	44.52	4.30
5162	7926	4.327010	GCCCTATATAGATGGAAGGAGGGA	60.327	50.000	11.53	0.00	44.48	4.20
5163	7927	5.463154	CCCTATATAGATGGAAGGAGGGAG	58.537	50.000	11.53	0.00	44.48	4.30
5299	8063	3.753797	TGCACACGCTTACATAAATTGGA	59.246	39.130	0.00	0.00	39.64	3.53
5437	8202	4.586001	ACACTGAAGAATTGCAGTTTCCAT	59.414	37.500	0.00	0.00	42.33	3.41
5438	8203	5.159209	CACTGAAGAATTGCAGTTTCCATC	58.841	41.667	0.00	2.69	42.33	3.51
5439	8204	5.048224	CACTGAAGAATTGCAGTTTCCATCT	60.048	40.000	0.00	0.00	42.33	2.90
5440	8205	5.182760	ACTGAAGAATTGCAGTTTCCATCTC	59.817	40.000	0.00	0.00	42.33	2.75
5441	8206	5.319453	TGAAGAATTGCAGTTTCCATCTCT	58.681	37.500	0.00	0.00	0.00	3.10
5442	8207	5.413833	TGAAGAATTGCAGTTTCCATCTCTC	59.586	40.000	0.00	0.00	0.00	3.20
5466	8231	0.971386	TCTCTCTCACAGCATGCACA	59.029	50.000	21.98	0.00	42.53	4.57
5580	8349	9.231297	CAAAAGGAGGTGATCTCAAAGTTATTA	57.769	33.333	0.00	0.00	44.19	0.98
5643	8412	5.830912	TCAACTAACAGACTTGCCAAATTG	58.169	37.500	0.00	0.00	0.00	2.32
5704	8473	6.809196	ACTTTCTCGTATCAGATGACACTTTC	59.191	38.462	0.00	0.00	0.00	2.62
5716	8485	4.077300	TGACACTTTCATCTGACTTGCT	57.923	40.909	0.00	0.00	0.00	3.91
6408	9247	3.139850	CAGCCTGCTTGGATCTCTTATG	58.860	50.000	0.00	0.00	38.35	1.90
6489	9330	4.086457	AGGTGGTTAAGTTAGCAAATGGG	58.914	43.478	0.00	0.00	0.00	4.00
6655	9496	8.742188	GCCATATTTAACATTACAATCAACACG	58.258	33.333	0.00	0.00	0.00	4.49
6664	9505	8.280909	ACATTACAATCAACACGATCAAAAAC	57.719	30.769	0.00	0.00	31.11	2.43
6667	9508	3.552604	ATCAACACGATCAAAAACGGG	57.447	42.857	0.00	0.00	38.94	5.28
7008	9886	2.880879	CGTCCTCGTGCACCATCG	60.881	66.667	12.15	5.77	0.00	3.84
7017	9895	0.745845	GTGCACCATCGCTTCCTCAT	60.746	55.000	5.22	0.00	0.00	2.90
7041	9919	5.324409	TGGACAGAACAAATTAATCCAGCT	58.676	37.500	0.00	0.00	31.25	4.24
7260	10148	0.970427	TGTCGGCATCTGTGAGGCTA	60.970	55.000	4.29	0.00	39.44	3.93
7295	10183	2.434185	GAAGGGACGCGACATGCA	60.434	61.111	15.93	0.00	46.97	3.96
7343	10231	3.011517	AGGTGGATGGCGAGGCTT	61.012	61.111	0.00	0.00	0.00	4.35
7418	10311	1.383109	TCTCCCGCATCCATGGAGT	60.383	57.895	21.33	5.73	44.87	3.85
7511	10641	1.736696	GCAAATGCGTTTGATGAGGGG	60.737	52.381	30.83	6.20	46.03	4.79
7536	10666	1.226104	TAGTACAGGAGGGGGAGCCA	61.226	60.000	0.00	0.00	0.00	4.75
7554	10684	2.995283	CCAATCTCAGTCTTGGCATCA	58.005	47.619	0.00	0.00	35.84	3.07
7674	10804	4.137872	CGCGTGGGGGTCGTGTAT	62.138	66.667	0.00	0.00	34.71	2.29
7843	10973	5.448654	TCGTGCTTTTATAGGGGTAGTAGA	58.551	41.667	0.00	0.00	0.00	2.59
7844	10974	6.073314	TCGTGCTTTTATAGGGGTAGTAGAT	58.927	40.000	0.00	0.00	0.00	1.98
7845	10975	7.233632	TCGTGCTTTTATAGGGGTAGTAGATA	58.766	38.462	0.00	0.00	0.00	1.98
7846	10976	7.392673	TCGTGCTTTTATAGGGGTAGTAGATAG	59.607	40.741	0.00	0.00	0.00	2.08
7847	10977	7.392673	CGTGCTTTTATAGGGGTAGTAGATAGA	59.607	40.741	0.00	0.00	0.00	1.98
7848	10978	9.257428	GTGCTTTTATAGGGGTAGTAGATAGAT	57.743	37.037	0.00	0.00	0.00	1.98
8064	11196	3.262405	AGTTCGCCCTAGTGGTATGAAAA	59.738	43.478	0.00	0.00	36.04	2.29
8188	11320	0.388659	TGCTTGTGTTGGTGGCAATC	59.611	50.000	0.00	0.00	0.00	2.67
8803	14246	2.774439	AATGTTTGTGAGTTGCGACC	57.226	45.000	0.00	0.00	0.00	4.79
8850	14297	2.777094	TGATCCGTTTGATTGCTGACA	58.223	42.857	0.00	0.00	32.41	3.58
8861	14308	5.627499	TGATTGCTGACACCATTTCTAAC	57.373	39.130	0.00	0.00	0.00	2.34
8862	14309	5.069318	TGATTGCTGACACCATTTCTAACA	58.931	37.500	0.00	0.00	0.00	2.41
8863	14310	5.711506	TGATTGCTGACACCATTTCTAACAT	59.288	36.000	0.00	0.00	0.00	2.71
8887	14334	6.583562	TCATCATCATCATCTCTATCATGCC	58.416	40.000	0.00	0.00	0.00	4.40
8958	14410	7.538678	ACTGAAGTACGATTGAAAATCAAATGC	59.461	33.333	0.00	0.00	40.12	3.56
8970	14422	4.460948	AATCAAATGCAAGTAGGCCAAG	57.539	40.909	5.01	0.00	0.00	3.61
8978	14430	3.576118	TGCAAGTAGGCCAAGCAATAAAA	59.424	39.130	5.01	0.00	31.42	1.52
8979	14431	4.176271	GCAAGTAGGCCAAGCAATAAAAG	58.824	43.478	5.01	0.00	0.00	2.27
8980	14432	4.747810	CAAGTAGGCCAAGCAATAAAAGG	58.252	43.478	5.01	0.00	0.00	3.11
8981	14433	3.365472	AGTAGGCCAAGCAATAAAAGGG	58.635	45.455	5.01	0.00	0.00	3.95
8982	14434	0.904649	AGGCCAAGCAATAAAAGGGC	59.095	50.000	5.01	0.00	44.47	5.19
8983	14435	0.904649	GGCCAAGCAATAAAAGGGCT	59.095	50.000	0.00	0.00	41.12	5.19
8984	14436	1.405933	GGCCAAGCAATAAAAGGGCTG	60.406	52.381	0.00	0.00	41.12	4.85
8985	14437	1.276138	GCCAAGCAATAAAAGGGCTGT	59.724	47.619	0.00	0.00	38.04	4.40
8986	14438	2.289631	GCCAAGCAATAAAAGGGCTGTT	60.290	45.455	0.00	0.00	38.04	3.16
8987	14439	3.806858	GCCAAGCAATAAAAGGGCTGTTT	60.807	43.478	0.00	0.00	38.04	2.83
8988	14440	4.388485	CCAAGCAATAAAAGGGCTGTTTT	58.612	39.130	0.00	4.07	38.04	2.43
8989	14441	4.452114	CCAAGCAATAAAAGGGCTGTTTTC	59.548	41.667	2.10	0.00	38.04	2.29
8990	14442	3.913089	AGCAATAAAAGGGCTGTTTTCG	58.087	40.909	2.10	0.00	36.34	3.46
8991	14443	2.411748	GCAATAAAAGGGCTGTTTTCGC	59.588	45.455	2.10	1.91	31.96	4.70
8992	14444	2.629639	ATAAAAGGGCTGTTTTCGCG	57.370	45.000	0.00	0.00	31.96	5.87
8993	14445	0.594110	TAAAAGGGCTGTTTTCGCGG	59.406	50.000	6.13	0.00	31.96	6.46
8994	14446	2.082629	AAAAGGGCTGTTTTCGCGGG	62.083	55.000	6.13	0.00	0.00	6.13
8999	14451	4.101790	CTGTTTTCGCGGGCGCAT	62.102	61.111	10.83	0.00	42.06	4.73
9000	14452	3.609214	CTGTTTTCGCGGGCGCATT	62.609	57.895	10.83	0.00	42.06	3.56
9006	14458	1.231221	TTCGCGGGCGCATTATTATT	58.769	45.000	10.83	0.00	42.06	1.40
9007	14459	1.231221	TCGCGGGCGCATTATTATTT	58.769	45.000	10.83	0.00	42.06	1.40
9015	14467	5.458015	GGGCGCATTATTATTTGAGGTAAC	58.542	41.667	10.83	0.00	0.00	2.50
9020	14472	7.535258	GCGCATTATTATTTGAGGTAACATCAG	59.465	37.037	0.30	0.00	41.41	2.90
9021	14473	8.559536	CGCATTATTATTTGAGGTAACATCAGT	58.440	33.333	0.00	0.00	41.41	3.41
9023	14475	9.669353	CATTATTATTTGAGGTAACATCAGTGC	57.331	33.333	0.00	0.00	41.41	4.40
9024	14476	9.632638	ATTATTATTTGAGGTAACATCAGTGCT	57.367	29.630	0.00	0.00	41.41	4.40
9039	14491	4.748892	TCAGTGCTAGTCATAGAACTTGC	58.251	43.478	3.97	3.97	44.39	4.01
9044	14496	5.903764	GCTAGTCATAGAACTTGCATCAG	57.096	43.478	5.76	0.00	44.20	2.90
9045	14497	5.595885	GCTAGTCATAGAACTTGCATCAGA	58.404	41.667	5.76	0.00	44.20	3.27
9046	14498	6.222389	GCTAGTCATAGAACTTGCATCAGAT	58.778	40.000	5.76	0.00	44.20	2.90
9047	14499	6.145858	GCTAGTCATAGAACTTGCATCAGATG	59.854	42.308	5.98	5.98	44.20	2.90
9048	14500	5.987098	AGTCATAGAACTTGCATCAGATGT	58.013	37.500	12.18	0.00	0.00	3.06
9049	14501	5.816258	AGTCATAGAACTTGCATCAGATGTG	59.184	40.000	12.18	5.63	0.00	3.21
9050	14502	4.573607	TCATAGAACTTGCATCAGATGTGC	59.426	41.667	12.18	0.41	42.81	4.57
9057	14509	1.542472	TGCATCAGATGTGCAGTTTGG	59.458	47.619	12.18	0.00	46.76	3.28
9058	14510	1.542915	GCATCAGATGTGCAGTTTGGT	59.457	47.619	12.18	0.00	42.08	3.67
9059	14511	2.670229	GCATCAGATGTGCAGTTTGGTG	60.670	50.000	12.18	0.00	42.08	4.17
9060	14512	0.953727	TCAGATGTGCAGTTTGGTGC	59.046	50.000	0.00	0.00	44.27	5.01
9061	14513	0.956633	CAGATGTGCAGTTTGGTGCT	59.043	50.000	0.00	0.00	44.32	4.40
9062	14514	2.153645	CAGATGTGCAGTTTGGTGCTA	58.846	47.619	0.00	0.00	44.32	3.49
9063	14515	2.553602	CAGATGTGCAGTTTGGTGCTAA	59.446	45.455	0.00	0.00	44.32	3.09
9064	14516	3.004629	CAGATGTGCAGTTTGGTGCTAAA	59.995	43.478	0.00	0.00	44.32	1.85
9065	14517	3.636300	AGATGTGCAGTTTGGTGCTAAAA	59.364	39.130	0.00	0.00	44.32	1.52
9066	14518	3.157932	TGTGCAGTTTGGTGCTAAAAC	57.842	42.857	0.00	2.47	44.32	2.43
9067	14519	2.757868	TGTGCAGTTTGGTGCTAAAACT	59.242	40.909	6.27	6.27	46.25	2.66
9068	14520	3.194542	TGTGCAGTTTGGTGCTAAAACTT	59.805	39.130	8.61	0.00	43.60	2.66
9069	14521	4.180817	GTGCAGTTTGGTGCTAAAACTTT	58.819	39.130	8.61	0.00	43.60	2.66
9070	14522	5.105716	TGTGCAGTTTGGTGCTAAAACTTTA	60.106	36.000	8.61	1.08	43.60	1.85
9071	14523	5.808030	GTGCAGTTTGGTGCTAAAACTTTAA	59.192	36.000	8.61	0.00	43.60	1.52
9072	14524	6.478673	GTGCAGTTTGGTGCTAAAACTTTAAT	59.521	34.615	8.61	0.00	43.60	1.40
9073	14525	7.650104	GTGCAGTTTGGTGCTAAAACTTTAATA	59.350	33.333	8.61	0.00	43.60	0.98
9074	14526	8.198109	TGCAGTTTGGTGCTAAAACTTTAATAA	58.802	29.630	8.61	0.00	43.60	1.40
9075	14527	9.203421	GCAGTTTGGTGCTAAAACTTTAATAAT	57.797	29.630	8.61	0.00	43.60	1.28
9079	14531	9.843334	TTTGGTGCTAAAACTTTAATAATACGG	57.157	29.630	0.00	0.00	0.00	4.02
9080	14532	8.564509	TGGTGCTAAAACTTTAATAATACGGT	57.435	30.769	0.00	0.00	0.00	4.83
9081	14533	9.012161	TGGTGCTAAAACTTTAATAATACGGTT	57.988	29.630	0.00	0.00	0.00	4.44
9082	14534	9.844790	GGTGCTAAAACTTTAATAATACGGTTT	57.155	29.630	0.00	0.00	0.00	3.27
9114	14566	6.478673	GTGCAGTTTGGTGCTAAAACTTTAAT	59.521	34.615	8.61	0.00	43.60	1.40
9121	14573	9.843334	TTTGGTGCTAAAACTTTAATAATACGG	57.157	29.630	0.00	0.00	0.00	4.02
9234	14686	0.614979	ACGGGCCTACTGTCAGTGAT	60.615	55.000	16.03	0.00	31.40	3.06
9244	14696	4.775058	ACTGTCAGTGATAGATATCGCC	57.225	45.455	22.26	0.00	42.61	5.54
9250	14702	2.757868	AGTGATAGATATCGCCTCAGGC	59.242	50.000	5.22	5.22	46.75	4.85
9266	14718	2.125512	GCACGGGCCTACTGTCAG	60.126	66.667	0.00	0.00	36.23	3.51
9267	14719	2.943978	GCACGGGCCTACTGTCAGT	61.944	63.158	10.99	10.99	36.23	3.41
9268	14720	1.079819	CACGGGCCTACTGTCAGTG	60.080	63.158	16.03	5.69	36.23	3.66
9269	14721	1.228769	ACGGGCCTACTGTCAGTGA	60.229	57.895	16.03	0.00	31.40	3.41
9270	14722	0.614979	ACGGGCCTACTGTCAGTGAT	60.615	55.000	16.03	0.00	31.40	3.06
9271	14723	1.341679	ACGGGCCTACTGTCAGTGATA	60.342	52.381	16.03	0.00	31.40	2.15
9272	14724	1.338337	CGGGCCTACTGTCAGTGATAG	59.662	57.143	16.03	14.76	0.00	2.08
9273	14725	2.667470	GGGCCTACTGTCAGTGATAGA	58.333	52.381	22.26	6.42	0.00	1.98
9274	14726	3.235200	GGGCCTACTGTCAGTGATAGAT	58.765	50.000	22.26	9.83	0.00	1.98
9275	14727	4.408276	GGGCCTACTGTCAGTGATAGATA	58.592	47.826	22.26	10.38	0.00	1.98
9276	14728	5.020132	GGGCCTACTGTCAGTGATAGATAT	58.980	45.833	22.26	4.03	0.00	1.63
9277	14729	5.126384	GGGCCTACTGTCAGTGATAGATATC	59.874	48.000	22.26	8.99	0.00	1.63
9278	14730	5.163703	GGCCTACTGTCAGTGATAGATATCG	60.164	48.000	22.26	6.81	35.48	2.92
9279	14731	5.675071	GCCTACTGTCAGTGATAGATATCGC	60.675	48.000	22.26	11.98	42.10	4.58
9280	14732	4.775058	ACTGTCAGTGATAGATATCGCC	57.225	45.455	22.26	0.00	42.61	5.54
9281	14733	4.402829	ACTGTCAGTGATAGATATCGCCT	58.597	43.478	22.26	0.00	42.61	5.52
9282	14734	5.561679	ACTGTCAGTGATAGATATCGCCTA	58.438	41.667	22.26	0.00	42.61	3.93
9283	14735	6.004574	ACTGTCAGTGATAGATATCGCCTAA	58.995	40.000	22.26	0.00	42.61	2.69
9284	14736	6.150307	ACTGTCAGTGATAGATATCGCCTAAG	59.850	42.308	22.26	5.90	42.61	2.18
9285	14737	5.416013	TGTCAGTGATAGATATCGCCTAAGG	59.584	44.000	9.27	0.00	42.61	2.69
9286	14738	4.950475	TCAGTGATAGATATCGCCTAAGGG	59.050	45.833	9.27	0.00	42.61	3.95
9287	14739	4.098654	CAGTGATAGATATCGCCTAAGGGG	59.901	50.000	9.27	0.00	42.61	4.79
9296	14748	2.746277	CCTAAGGGGCACGTGCAC	60.746	66.667	38.60	36.67	45.53	4.57
9302	14754	4.748409	GGGCACGTGCACATTTTT	57.252	50.000	38.60	0.00	45.57	1.94
9303	14755	3.875838	GGGCACGTGCACATTTTTA	57.124	47.368	38.60	0.00	45.57	1.52
9304	14756	2.362169	GGGCACGTGCACATTTTTAT	57.638	45.000	38.60	0.00	45.57	1.40
9305	14757	2.682836	GGGCACGTGCACATTTTTATT	58.317	42.857	38.60	0.00	45.57	1.40
9306	14758	3.063485	GGGCACGTGCACATTTTTATTT	58.937	40.909	38.60	0.00	45.57	1.40
9307	14759	3.496507	GGGCACGTGCACATTTTTATTTT	59.503	39.130	38.60	0.00	45.57	1.82
9308	14760	4.453339	GGCACGTGCACATTTTTATTTTG	58.547	39.130	38.60	0.00	44.36	2.44
9309	14761	3.899531	GCACGTGCACATTTTTATTTTGC	59.100	39.130	34.52	0.80	41.59	3.68
9310	14762	4.551603	GCACGTGCACATTTTTATTTTGCA	60.552	37.500	34.52	0.00	40.81	4.08
9311	14763	5.131890	CACGTGCACATTTTTATTTTGCAG	58.868	37.500	18.64	0.00	43.57	4.41
9312	14764	5.046529	ACGTGCACATTTTTATTTTGCAGA	58.953	33.333	18.64	0.00	43.57	4.26
9313	14765	5.521735	ACGTGCACATTTTTATTTTGCAGAA	59.478	32.000	18.64	0.00	43.57	3.02
9314	14766	6.036517	ACGTGCACATTTTTATTTTGCAGAAA	59.963	30.769	18.64	0.00	43.57	2.52
9315	14767	6.904011	CGTGCACATTTTTATTTTGCAGAAAA	59.096	30.769	18.64	0.00	43.57	2.29
9316	14768	7.110490	CGTGCACATTTTTATTTTGCAGAAAAG	59.890	33.333	18.64	0.00	43.57	2.27
9317	14769	6.911511	TGCACATTTTTATTTTGCAGAAAAGC	59.088	30.769	0.00	0.00	38.25	3.51
9318	14770	6.360414	GCACATTTTTATTTTGCAGAAAAGCC	59.640	34.615	0.00	0.00	34.53	4.35
9319	14771	6.857451	CACATTTTTATTTTGCAGAAAAGCCC	59.143	34.615	0.00	0.00	34.53	5.19
9320	14772	6.772233	ACATTTTTATTTTGCAGAAAAGCCCT	59.228	30.769	0.00	0.00	34.53	5.19
9321	14773	6.859420	TTTTTATTTTGCAGAAAAGCCCTC	57.141	33.333	0.00	0.00	34.53	4.30
9322	14774	5.543507	TTTATTTTGCAGAAAAGCCCTCA	57.456	34.783	0.00	0.00	34.53	3.86
9323	14775	5.543507	TTATTTTGCAGAAAAGCCCTCAA	57.456	34.783	0.00	0.00	34.53	3.02
9324	14776	3.902881	TTTTGCAGAAAAGCCCTCAAA	57.097	38.095	0.00	0.00	0.00	2.69
9325	14777	4.420522	TTTTGCAGAAAAGCCCTCAAAT	57.579	36.364	0.00	0.00	0.00	2.32
9328	14780	5.543507	TTGCAGAAAAGCCCTCAAATTTA	57.456	34.783	0.00	0.00	0.00	1.40
9339	14791	8.496707	AAGCCCTCAAATTTATTATTTTGCAG	57.503	30.769	0.00	0.00	33.77	4.41
9350	14802	5.743636	ATTATTTTGCAGAAAAGCCCTCA	57.256	34.783	0.00	0.00	34.53	3.86
9359	14811	5.933463	TGCAGAAAAGCCCTCAAATTTATTG	59.067	36.000	0.00	0.00	0.00	1.90
9379	14831	2.096248	GAATTACGAACAATGGCCCCA	58.904	47.619	0.00	0.00	0.00	4.96
9385	14837	1.672441	CGAACAATGGCCCCACAAATG	60.672	52.381	0.00	0.00	0.00	2.32
9470	14925	0.694196	GGGCTACCCAGTACACCAAA	59.306	55.000	0.00	0.00	44.65	3.28
9545	15001	9.950496	ATGACCACTACTCATATCCAAATAATC	57.050	33.333	0.00	0.00	0.00	1.75
9586	15045	1.651987	TAAGAGAAATTGAGCGCCCG	58.348	50.000	2.29	0.00	0.00	6.13
9590	15049	1.199097	GAGAAATTGAGCGCCCGAAAA	59.801	47.619	2.29	0.00	0.00	2.29
9632	15091	9.429359	AGAGAAACAAGTCTAACAATACATGAG	57.571	33.333	0.00	0.00	0.00	2.90
9662	15121	6.942576	ACTTAAATCCTCATATGGGCATACAC	59.057	38.462	2.13	0.00	0.00	2.90
9673	15133	2.965831	TGGGCATACACTATCAGACCTC	59.034	50.000	0.00	0.00	0.00	3.85
9771	15233	2.159841	CGCAACAATGAATTCGACTCGT	60.160	45.455	0.04	0.00	0.00	4.18
9779	15241	4.966850	TGAATTCGACTCGTGACTTTTC	57.033	40.909	0.04	0.00	0.00	2.29
9785	15247	5.481200	TCGACTCGTGACTTTTCTATAGG	57.519	43.478	0.00	0.00	0.00	2.57
9787	15249	4.334759	CGACTCGTGACTTTTCTATAGGGA	59.665	45.833	0.00	0.00	0.00	4.20
9788	15250	5.579564	ACTCGTGACTTTTCTATAGGGAC	57.420	43.478	0.00	0.00	0.00	4.46
9793	15255	3.383825	TGACTTTTCTATAGGGACGGAGC	59.616	47.826	0.00	0.00	0.00	4.70
9812	15274	1.369692	CGGGCTGACCACTGTACAA	59.630	57.895	0.00	0.00	40.22	2.41
9828	15290	8.564574	CCACTGTACAAGAAGCACTTATTTAAA	58.435	33.333	0.00	0.00	37.03	1.52

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
113	114	4.203001	TGGGTATATCCATGGGTATGAGGT	60.203	45.833	25.30	4.09	36.36	3.85
201	203	3.451178	GCCCATCTCCTTTGACACTACTA	59.549	47.826	0.00	0.00	0.00	1.82
527	529	4.506354	TCCCTGATGGAGATTCATACCAT	58.494	43.478	0.00	0.00	45.50	3.55
540	542	4.470602	GGTAAACCCTTTATCCCTGATGG	58.529	47.826	0.00	0.00	0.00	3.51
602	604	1.341606	GAAGAACTGGAAGACGAGCG	58.658	55.000	0.00	0.00	37.43	5.03
643	645	1.802136	CGCAAGATCAGGACAGAGAGC	60.802	57.143	0.00	0.00	43.02	4.09
644	646	1.802136	GCGCAAGATCAGGACAGAGAG	60.802	57.143	0.30	0.00	43.02	3.20
648	650	4.928398	AGCGCAAGATCAGGACAG	57.072	55.556	11.47	0.00	43.02	3.51
671	673	2.201436	CTCCACTCTCACACCGACGG	62.201	65.000	13.61	13.61	0.00	4.79
703	705	2.534990	CTCACCCTTCTCTCACCTCTT	58.465	52.381	0.00	0.00	0.00	2.85
744	746	0.737715	GAGATGTCGCGTTGCTTCCT	60.738	55.000	5.77	0.00	0.00	3.36
771	773	0.037232	GAAGGTTGCACGCTAGGAGT	60.037	55.000	0.00	0.00	0.00	3.85
777	779	1.291877	GATGTCGAAGGTTGCACGCT	61.292	55.000	0.00	0.00	0.00	5.07
785	787	1.374252	GCACGTGGATGTCGAAGGT	60.374	57.895	18.88	0.00	0.00	3.50
791	793	2.126618	TCGACGCACGTGGATGTC	60.127	61.111	18.88	8.72	43.13	3.06
842	844	0.379669	GTAGGAACGCTCGAATCGGA	59.620	55.000	1.76	0.00	0.00	4.55
853	855	1.218316	GTCTGGCTGGGTAGGAACG	59.782	63.158	0.00	0.00	0.00	3.95
917	919	0.380378	TGACTCGTTTGGTTGCTTGC	59.620	50.000	0.00	0.00	0.00	4.01
934	936	7.512130	ACCAGATCTGCATGATATAGTTTTGA	58.488	34.615	17.76	0.00	35.14	2.69
943	945	4.164796	AGGTTCAACCAGATCTGCATGATA	59.835	41.667	21.97	13.75	41.95	2.15
953	955	3.624777	CCTGCATTAGGTTCAACCAGAT	58.375	45.455	9.90	0.00	41.95	2.90
999	1001	0.035317	GCACCTCACATGACCACAGA	59.965	55.000	0.00	0.00	0.00	3.41
1000	1002	0.035881	AGCACCTCACATGACCACAG	59.964	55.000	0.00	0.00	0.00	3.66
1003	1005	0.322648	CAGAGCACCTCACATGACCA	59.677	55.000	0.00	0.00	32.06	4.02
1092	1095	4.580580	AGATTTCTGCGCTTAATTAAGGGG	59.419	41.667	31.70	21.19	43.84	4.79
1103	1106	1.852157	TTGGGGGAGATTTCTGCGCT	61.852	55.000	9.73	0.00	44.53	5.92
1249	1252	2.612493	CCCCTTGGACGTCCCCAAT	61.612	63.158	31.19	0.00	44.44	3.16
1381	1384	0.462759	GAATGGGAGAACAGCGGGAG	60.463	60.000	0.00	0.00	0.00	4.30
1924	2018	3.183373	CGAGTGTTTTTCTCAGCAGAGTC	59.817	47.826	5.98	0.00	42.66	3.36
1949	2043	1.600916	GAGTGCCGCCAAAGAAGGT	60.601	57.895	0.00	0.00	0.00	3.50
2013	3419	2.868583	CTGCATTCCTTGGTATCACGAG	59.131	50.000	0.00	0.00	0.00	4.18
2099	3511	3.005261	GCAGCTACTAATCTAGCAGAGCA	59.995	47.826	1.30	0.00	41.55	4.26
2388	3851	4.691860	CCAAGAACAGGCAGATAAAGTG	57.308	45.455	0.00	0.00	0.00	3.16
2450	3914	5.178996	GCTGCTAATACAGAGATGATTGTGG	59.821	44.000	0.00	0.00	40.25	4.17
2499	3963	1.000896	ATACAACACCCTGGCCTGC	60.001	57.895	3.32	0.00	0.00	4.85
2583	4047	1.819928	TTCTAGCAAGCAATTCGGCA	58.180	45.000	0.00	0.00	35.83	5.69
2727	4255	4.229304	TGTTTACCATGGTAGGGTGATG	57.771	45.455	23.40	0.00	39.48	3.07
2903	4431	3.465871	TGTTTCTCAAATTGCCCTTTGC	58.534	40.909	3.80	0.00	36.32	3.68
2932	4460	4.734398	ATGGAGTTGTGTGCAAAGAAAA	57.266	36.364	0.00	0.00	36.22	2.29
3020	4548	4.523083	TGCCTACTATGGGAATTGTGTTC	58.477	43.478	0.00	0.00	0.00	3.18
3145	4785	0.811616	CAAGTCGAGGCCAGCATACC	60.812	60.000	5.01	0.00	0.00	2.73
3220	4955	2.563261	ACGTACAGACAGAGACAGGA	57.437	50.000	0.00	0.00	0.00	3.86
3222	4957	5.804692	AGAATACGTACAGACAGAGACAG	57.195	43.478	0.00	0.00	0.00	3.51
3223	4958	6.659361	GTAGAATACGTACAGACAGAGACA	57.341	41.667	0.00	0.00	0.00	3.41
3519	5262	1.462616	ACAGCAGCCGAATTGCATAA	58.537	45.000	8.15	0.00	43.92	1.90
3520	5263	2.212652	CTACAGCAGCCGAATTGCATA	58.787	47.619	8.15	1.07	43.92	3.14
3867	5611	0.980231	TGCACCAGGTTGCCCTTTTT	60.980	50.000	10.46	0.00	42.25	1.94
3868	5612	0.763986	ATGCACCAGGTTGCCCTTTT	60.764	50.000	10.46	0.00	42.25	2.27
3869	5613	1.152269	ATGCACCAGGTTGCCCTTT	60.152	52.632	10.46	0.00	42.25	3.11
3870	5614	1.909781	CATGCACCAGGTTGCCCTT	60.910	57.895	10.46	0.00	42.25	3.95
3871	5615	1.788518	TACATGCACCAGGTTGCCCT	61.789	55.000	10.46	0.00	42.25	5.19
3872	5616	1.304052	TACATGCACCAGGTTGCCC	60.304	57.895	10.46	0.00	42.25	5.36
3873	5617	1.937546	GCTACATGCACCAGGTTGCC	61.938	60.000	10.46	0.00	39.88	4.52
3874	5618	0.962356	AGCTACATGCACCAGGTTGC	60.962	55.000	8.03	8.03	44.17	4.17
3875	5619	1.089920	GAGCTACATGCACCAGGTTG	58.910	55.000	0.00	0.00	45.94	3.77
3876	5620	3.558674	GAGCTACATGCACCAGGTT	57.441	52.632	0.00	0.00	45.94	3.50
3901	5645	4.785453	CTTCCCTGGACCCTGCGC	62.785	72.222	0.00	0.00	0.00	6.09
3902	5646	4.101448	CCTTCCCTGGACCCTGCG	62.101	72.222	0.00	0.00	0.00	5.18
3903	5647	3.732849	CCCTTCCCTGGACCCTGC	61.733	72.222	0.00	0.00	0.00	4.85
3904	5648	2.204151	ACCCTTCCCTGGACCCTG	60.204	66.667	0.00	0.00	0.00	4.45
3905	5649	2.125225	GACCCTTCCCTGGACCCT	59.875	66.667	0.00	0.00	0.00	4.34
3906	5650	3.015753	GGACCCTTCCCTGGACCC	61.016	72.222	0.00	0.00	35.57	4.46
3907	5651	3.400054	CGGACCCTTCCCTGGACC	61.400	72.222	0.00	0.00	38.99	4.46
3908	5652	2.284405	TCGGACCCTTCCCTGGAC	60.284	66.667	0.00	0.00	38.99	4.02
3909	5653	2.284405	GTCGGACCCTTCCCTGGA	60.284	66.667	0.00	0.00	38.99	3.86
3910	5654	3.400054	GGTCGGACCCTTCCCTGG	61.400	72.222	16.55	0.00	38.99	4.45
3911	5655	2.606519	TGGTCGGACCCTTCCCTG	60.607	66.667	23.81	0.00	38.99	4.45
3912	5656	2.606826	GTGGTCGGACCCTTCCCT	60.607	66.667	23.81	0.00	38.99	4.20
3913	5657	1.775934	AAAGTGGTCGGACCCTTCCC	61.776	60.000	23.81	7.17	38.99	3.97
3914	5658	0.605589	CAAAGTGGTCGGACCCTTCC	60.606	60.000	23.81	9.51	37.50	3.46
3915	5659	0.605589	CCAAAGTGGTCGGACCCTTC	60.606	60.000	23.81	13.97	37.50	3.46
3916	5660	1.454539	CCAAAGTGGTCGGACCCTT	59.545	57.895	23.81	21.08	37.50	3.95
3917	5661	2.526046	CCCAAAGTGGTCGGACCCT	61.526	63.158	23.81	16.82	37.50	4.34
3918	5662	2.033602	CCCAAAGTGGTCGGACCC	59.966	66.667	23.81	14.91	37.50	4.46
3919	5663	1.302271	GACCCAAAGTGGTCGGACC	60.302	63.158	20.36	20.36	44.98	4.46
3920	5664	4.373771	GACCCAAAGTGGTCGGAC	57.626	61.111	0.00	0.00	44.98	4.79
3925	5669	3.131755	GCGTACTATAGACCCAAAGTGGT	59.868	47.826	6.78	0.00	42.79	4.16
3926	5670	3.131577	TGCGTACTATAGACCCAAAGTGG	59.868	47.826	6.78	0.00	37.25	4.00
3927	5671	4.360563	CTGCGTACTATAGACCCAAAGTG	58.639	47.826	6.78	0.00	0.00	3.16
3928	5672	3.181478	GCTGCGTACTATAGACCCAAAGT	60.181	47.826	6.78	0.00	0.00	2.66
3929	5673	3.381949	GCTGCGTACTATAGACCCAAAG	58.618	50.000	6.78	0.00	0.00	2.77
3930	5674	2.101917	GGCTGCGTACTATAGACCCAAA	59.898	50.000	6.78	0.00	0.00	3.28
3931	5675	1.684983	GGCTGCGTACTATAGACCCAA	59.315	52.381	6.78	0.00	0.00	4.12
3932	5676	1.133575	AGGCTGCGTACTATAGACCCA	60.134	52.381	6.78	0.00	0.00	4.51
3933	5677	1.618487	AGGCTGCGTACTATAGACCC	58.382	55.000	6.78	0.00	0.00	4.46
3934	5678	3.552478	GGAAAGGCTGCGTACTATAGACC	60.552	52.174	6.78	0.00	0.00	3.85
3935	5679	3.552478	GGGAAAGGCTGCGTACTATAGAC	60.552	52.174	6.78	0.00	0.00	2.59
3936	5680	2.626743	GGGAAAGGCTGCGTACTATAGA	59.373	50.000	6.78	0.00	0.00	1.98
3937	5681	2.628657	AGGGAAAGGCTGCGTACTATAG	59.371	50.000	0.00	0.00	0.00	1.31
3938	5682	2.674420	AGGGAAAGGCTGCGTACTATA	58.326	47.619	0.00	0.00	0.00	1.31
3939	5683	1.497161	AGGGAAAGGCTGCGTACTAT	58.503	50.000	0.00	0.00	0.00	2.12
3940	5684	1.753073	GTAGGGAAAGGCTGCGTACTA	59.247	52.381	0.00	0.00	34.81	1.82
3941	5685	0.535797	GTAGGGAAAGGCTGCGTACT	59.464	55.000	0.00	0.00	34.81	2.73
3942	5686	0.248289	TGTAGGGAAAGGCTGCGTAC	59.752	55.000	0.00	0.00	37.28	3.67
3943	5687	1.200519	ATGTAGGGAAAGGCTGCGTA	58.799	50.000	0.00	0.00	0.00	4.42
3944	5688	0.328258	AATGTAGGGAAAGGCTGCGT	59.672	50.000	0.00	0.00	0.00	5.24
3945	5689	1.401905	GAAATGTAGGGAAAGGCTGCG	59.598	52.381	0.00	0.00	0.00	5.18
3946	5690	2.424956	CAGAAATGTAGGGAAAGGCTGC	59.575	50.000	0.00	0.00	0.00	5.25
3947	5691	3.690460	ACAGAAATGTAGGGAAAGGCTG	58.310	45.455	0.00	0.00	0.00	4.85
3948	5692	5.250774	TCTTACAGAAATGTAGGGAAAGGCT	59.749	40.000	0.00	0.00	0.00	4.58
3949	5693	5.497474	TCTTACAGAAATGTAGGGAAAGGC	58.503	41.667	0.00	0.00	0.00	4.35
3950	5694	6.116126	CCTCTTACAGAAATGTAGGGAAAGG	58.884	44.000	0.00	0.00	0.00	3.11
3951	5695	5.586643	GCCTCTTACAGAAATGTAGGGAAAG	59.413	44.000	0.00	0.00	0.00	2.62
3952	5696	5.250774	AGCCTCTTACAGAAATGTAGGGAAA	59.749	40.000	0.00	0.00	0.00	3.13
3953	5697	4.783227	AGCCTCTTACAGAAATGTAGGGAA	59.217	41.667	0.00	0.00	0.00	3.97
3954	5698	4.162320	CAGCCTCTTACAGAAATGTAGGGA	59.838	45.833	0.00	0.00	0.00	4.20
3955	5699	4.080863	ACAGCCTCTTACAGAAATGTAGGG	60.081	45.833	0.00	0.66	0.00	3.53
3956	5700	5.091261	ACAGCCTCTTACAGAAATGTAGG	57.909	43.478	0.00	0.00	0.00	3.18
3957	5701	6.092807	GGAAACAGCCTCTTACAGAAATGTAG	59.907	42.308	0.00	0.00	0.00	2.74
3958	5702	5.938125	GGAAACAGCCTCTTACAGAAATGTA	59.062	40.000	0.00	0.00	0.00	2.29
3959	5703	4.762251	GGAAACAGCCTCTTACAGAAATGT	59.238	41.667	0.00	0.00	0.00	2.71
3960	5704	4.761739	TGGAAACAGCCTCTTACAGAAATG	59.238	41.667	0.00	0.00	35.01	2.32
3961	5705	4.985538	TGGAAACAGCCTCTTACAGAAAT	58.014	39.130	0.00	0.00	35.01	2.17
3962	5706	4.431416	TGGAAACAGCCTCTTACAGAAA	57.569	40.909	0.00	0.00	35.01	2.52
3976	5720	1.566703	TGGGTTCAAGTCCTGGAAACA	59.433	47.619	0.00	0.00	32.36	2.83
3977	5721	2.358322	TGGGTTCAAGTCCTGGAAAC	57.642	50.000	0.00	0.00	0.00	2.78
3978	5722	2.445145	TCATGGGTTCAAGTCCTGGAAA	59.555	45.455	0.00	0.00	0.00	3.13
3979	5723	2.061848	TCATGGGTTCAAGTCCTGGAA	58.938	47.619	0.00	0.00	0.00	3.53
3980	5724	1.351017	GTCATGGGTTCAAGTCCTGGA	59.649	52.381	0.00	0.00	0.00	3.86
3981	5725	1.614317	GGTCATGGGTTCAAGTCCTGG	60.614	57.143	0.00	0.00	0.00	4.45
3982	5726	1.352352	AGGTCATGGGTTCAAGTCCTG	59.648	52.381	0.00	0.00	0.00	3.86
3983	5727	1.630878	GAGGTCATGGGTTCAAGTCCT	59.369	52.381	0.00	0.00	0.00	3.85
3984	5728	1.351017	TGAGGTCATGGGTTCAAGTCC	59.649	52.381	0.00	0.00	0.00	3.85
3985	5729	2.859165	TGAGGTCATGGGTTCAAGTC	57.141	50.000	0.00	0.00	0.00	3.01
4000	5744	1.310933	GCTGCCTTGTGACCATGAGG	61.311	60.000	0.00	0.00	42.21	3.86
4001	5745	0.607217	TGCTGCCTTGTGACCATGAG	60.607	55.000	0.00	0.00	0.00	2.90
4002	5746	0.607217	CTGCTGCCTTGTGACCATGA	60.607	55.000	0.00	0.00	0.00	3.07
4003	5747	1.880894	CTGCTGCCTTGTGACCATG	59.119	57.895	0.00	0.00	0.00	3.66
4004	5748	1.975407	GCTGCTGCCTTGTGACCAT	60.975	57.895	3.85	0.00	0.00	3.55
4005	5749	2.595463	GCTGCTGCCTTGTGACCA	60.595	61.111	3.85	0.00	0.00	4.02
4006	5750	1.458639	AAAGCTGCTGCCTTGTGACC	61.459	55.000	12.44	0.00	40.80	4.02
4007	5751	1.068954	GTAAAGCTGCTGCCTTGTGAC	60.069	52.381	12.44	0.00	40.80	3.67
4008	5752	1.238439	GTAAAGCTGCTGCCTTGTGA	58.762	50.000	12.44	0.00	40.80	3.58
4009	5753	0.242017	GGTAAAGCTGCTGCCTTGTG	59.758	55.000	12.44	0.00	40.80	3.33
4010	5754	0.178992	TGGTAAAGCTGCTGCCTTGT	60.179	50.000	12.44	0.00	40.80	3.16
4011	5755	0.242017	GTGGTAAAGCTGCTGCCTTG	59.758	55.000	12.44	0.00	40.80	3.61
4012	5756	0.111253	AGTGGTAAAGCTGCTGCCTT	59.889	50.000	12.44	8.34	40.80	4.35
4013	5757	0.984230	TAGTGGTAAAGCTGCTGCCT	59.016	50.000	12.44	2.45	40.80	4.75
4014	5758	1.087501	GTAGTGGTAAAGCTGCTGCC	58.912	55.000	12.44	7.07	40.80	4.85
4015	5759	0.721718	CGTAGTGGTAAAGCTGCTGC	59.278	55.000	1.35	7.62	40.05	5.25
4016	5760	0.721718	GCGTAGTGGTAAAGCTGCTG	59.278	55.000	1.35	0.00	0.00	4.41
4017	5761	0.391263	GGCGTAGTGGTAAAGCTGCT	60.391	55.000	0.00	0.00	0.00	4.24
4018	5762	0.672401	TGGCGTAGTGGTAAAGCTGC	60.672	55.000	0.00	0.00	0.00	5.25
4019	5763	1.732259	CTTGGCGTAGTGGTAAAGCTG	59.268	52.381	0.00	0.00	0.00	4.24
4020	5764	1.338769	CCTTGGCGTAGTGGTAAAGCT	60.339	52.381	0.00	0.00	0.00	3.74
4021	5765	1.084289	CCTTGGCGTAGTGGTAAAGC	58.916	55.000	0.00	0.00	0.00	3.51
4022	5766	1.084289	GCCTTGGCGTAGTGGTAAAG	58.916	55.000	0.00	0.00	0.00	1.85
4023	5767	0.688487	AGCCTTGGCGTAGTGGTAAA	59.312	50.000	5.95	0.00	0.00	2.01
4024	5768	0.248289	GAGCCTTGGCGTAGTGGTAA	59.752	55.000	5.95	0.00	0.00	2.85
4025	5769	1.610554	GGAGCCTTGGCGTAGTGGTA	61.611	60.000	5.95	0.00	0.00	3.25
4026	5770	2.663196	GAGCCTTGGCGTAGTGGT	59.337	61.111	5.95	0.00	0.00	4.16
4027	5771	2.125106	GGAGCCTTGGCGTAGTGG	60.125	66.667	5.95	0.00	0.00	4.00
4028	5772	2.125106	GGGAGCCTTGGCGTAGTG	60.125	66.667	5.95	0.00	0.00	2.74
4029	5773	3.400054	GGGGAGCCTTGGCGTAGT	61.400	66.667	5.95	0.00	0.00	2.73
4030	5774	2.595009	GAAGGGGAGCCTTGGCGTAG	62.595	65.000	5.95	0.00	0.00	3.51
4031	5775	2.609610	AAGGGGAGCCTTGGCGTA	60.610	61.111	5.95	0.00	0.00	4.42
4032	5776	4.035102	GAAGGGGAGCCTTGGCGT	62.035	66.667	5.95	0.00	0.00	5.68
4033	5777	4.803908	GGAAGGGGAGCCTTGGCG	62.804	72.222	5.95	0.00	0.00	5.69
4034	5778	3.661648	TGGAAGGGGAGCCTTGGC	61.662	66.667	2.97	2.97	0.00	4.52
4035	5779	2.356667	GTGGAAGGGGAGCCTTGG	59.643	66.667	0.00	0.00	0.00	3.61
4036	5780	1.867595	ATGGTGGAAGGGGAGCCTTG	61.868	60.000	0.00	0.00	0.00	3.61
4037	5781	1.544917	ATGGTGGAAGGGGAGCCTT	60.545	57.895	0.00	0.00	0.00	4.35
4038	5782	2.128226	ATGGTGGAAGGGGAGCCT	59.872	61.111	0.00	0.00	0.00	4.58
4039	5783	2.276740	CATGGTGGAAGGGGAGCC	59.723	66.667	0.00	0.00	0.00	4.70
4040	5784	2.276740	CCATGGTGGAAGGGGAGC	59.723	66.667	2.57	0.00	40.96	4.70
4041	5785	4.169452	TCCATGGTGGAAGGGGAG	57.831	61.111	12.58	0.00	45.00	4.30
4048	5792	5.133491	TGGTTGATATATGTTCCATGGTGGA	59.867	40.000	12.58	0.00	46.61	4.02
4049	5793	5.384336	TGGTTGATATATGTTCCATGGTGG	58.616	41.667	12.58	0.00	39.43	4.61
4050	5794	6.064060	ACTGGTTGATATATGTTCCATGGTG	58.936	40.000	12.58	0.00	0.00	4.17
4051	5795	6.266131	ACTGGTTGATATATGTTCCATGGT	57.734	37.500	12.58	0.00	0.00	3.55
4052	5796	8.690203	TTAACTGGTTGATATATGTTCCATGG	57.310	34.615	4.97	4.97	0.00	3.66
4145	6015	8.579850	TTGATTTTGATATGTGGTTCTTAGCT	57.420	30.769	0.00	0.00	0.00	3.32
4245	6116	4.879104	TTTGCTGCTTTTCACATTTTGG	57.121	36.364	0.00	0.00	0.00	3.28
4365	6236	4.021544	TGATTGCAAGGTTTGGGTATGAAC	60.022	41.667	4.94	0.00	0.00	3.18
4394	6265	3.717576	TGATGAGGTTCTGATGGTCTCT	58.282	45.455	0.00	0.00	0.00	3.10
4395	6266	4.686191	ATGATGAGGTTCTGATGGTCTC	57.314	45.455	0.00	0.00	0.00	3.36
4620	6491	5.001232	TCTGCTATTGTGGTGAGGTTTTAC	58.999	41.667	0.00	0.00	0.00	2.01
4643	6514	5.393068	TTGCCTCCATTTTATCCAGATCT	57.607	39.130	0.00	0.00	0.00	2.75
4925	7689	6.162420	CCCTATATAGATGGAAGGAGGGAGTA	59.838	46.154	11.53	0.00	44.48	2.59
4926	7690	5.042979	CCCTATATAGATGGAAGGAGGGAGT	60.043	48.000	11.53	0.00	44.48	3.85
4927	7691	5.463154	CCCTATATAGATGGAAGGAGGGAG	58.537	50.000	11.53	0.00	44.48	4.30
4928	7692	4.327010	GCCCTATATAGATGGAAGGAGGGA	60.327	50.000	11.53	0.00	44.48	4.20
4929	7693	3.970640	GCCCTATATAGATGGAAGGAGGG	59.029	52.174	11.53	3.52	44.52	4.30
4930	7694	3.970640	GGCCCTATATAGATGGAAGGAGG	59.029	52.174	11.53	1.87	0.00	4.30
4931	7695	4.889780	AGGCCCTATATAGATGGAAGGAG	58.110	47.826	11.53	0.00	0.00	3.69
4932	7696	4.994411	AGGCCCTATATAGATGGAAGGA	57.006	45.455	11.53	0.00	0.00	3.36
4933	7697	6.465035	GCATTAGGCCCTATATAGATGGAAGG	60.465	46.154	11.53	3.94	36.11	3.46
4934	7698	6.529220	GCATTAGGCCCTATATAGATGGAAG	58.471	44.000	11.53	0.00	36.11	3.46
4935	7699	5.070446	CGCATTAGGCCCTATATAGATGGAA	59.930	44.000	11.53	0.00	40.31	3.53
4936	7700	4.588951	CGCATTAGGCCCTATATAGATGGA	59.411	45.833	11.53	0.00	40.31	3.41
4937	7701	4.345257	ACGCATTAGGCCCTATATAGATGG	59.655	45.833	11.53	6.04	40.31	3.51
4938	7702	5.537300	ACGCATTAGGCCCTATATAGATG	57.463	43.478	11.53	6.87	40.31	2.90
4939	7703	6.561519	AAACGCATTAGGCCCTATATAGAT	57.438	37.500	11.53	0.00	40.31	1.98
4940	7704	6.368779	AAAACGCATTAGGCCCTATATAGA	57.631	37.500	11.53	0.00	40.31	1.98
4941	7705	6.183360	CGAAAAACGCATTAGGCCCTATATAG	60.183	42.308	0.00	2.46	40.31	1.31
4942	7706	5.640357	CGAAAAACGCATTAGGCCCTATATA	59.360	40.000	0.00	0.00	40.31	0.86
4943	7707	4.454504	CGAAAAACGCATTAGGCCCTATAT	59.545	41.667	0.00	0.00	40.31	0.86
4944	7708	3.810941	CGAAAAACGCATTAGGCCCTATA	59.189	43.478	0.00	0.00	40.31	1.31
4945	7709	2.616842	CGAAAAACGCATTAGGCCCTAT	59.383	45.455	0.00	0.00	40.31	2.57
4946	7710	2.011222	CGAAAAACGCATTAGGCCCTA	58.989	47.619	0.00	0.00	40.31	3.53
4947	7711	0.808755	CGAAAAACGCATTAGGCCCT	59.191	50.000	0.00	0.00	40.31	5.19
4948	7712	0.179148	CCGAAAAACGCATTAGGCCC	60.179	55.000	0.00	0.00	40.31	5.80
4949	7713	0.179148	CCCGAAAAACGCATTAGGCC	60.179	55.000	0.00	0.00	40.31	5.19
4950	7714	0.179148	CCCCGAAAAACGCATTAGGC	60.179	55.000	0.00	0.00	41.07	3.93
4951	7715	0.179148	GCCCCGAAAAACGCATTAGG	60.179	55.000	0.00	0.00	41.07	2.69
4952	7716	0.808755	AGCCCCGAAAAACGCATTAG	59.191	50.000	0.00	0.00	41.07	1.73
4953	7717	2.110901	TAGCCCCGAAAAACGCATTA	57.889	45.000	0.00	0.00	41.07	1.90
4954	7718	1.068125	GTTAGCCCCGAAAAACGCATT	60.068	47.619	0.00	0.00	41.07	3.56
4955	7719	0.524414	GTTAGCCCCGAAAAACGCAT	59.476	50.000	0.00	0.00	41.07	4.73
4956	7720	0.535553	AGTTAGCCCCGAAAAACGCA	60.536	50.000	0.00	0.00	41.07	5.24
4957	7721	0.594602	AAGTTAGCCCCGAAAAACGC	59.405	50.000	0.00	0.00	41.07	4.84
4958	7722	2.291190	TCAAAGTTAGCCCCGAAAAACG	59.709	45.455	0.00	0.00	42.18	3.60
4959	7723	3.551454	GGTCAAAGTTAGCCCCGAAAAAC	60.551	47.826	0.00	0.00	0.00	2.43
4960	7724	2.624364	GGTCAAAGTTAGCCCCGAAAAA	59.376	45.455	0.00	0.00	0.00	1.94
4961	7725	2.232399	GGTCAAAGTTAGCCCCGAAAA	58.768	47.619	0.00	0.00	0.00	2.29
4962	7726	1.143277	TGGTCAAAGTTAGCCCCGAAA	59.857	47.619	0.00	0.00	0.00	3.46
4963	7727	0.766131	TGGTCAAAGTTAGCCCCGAA	59.234	50.000	0.00	0.00	0.00	4.30
4964	7728	0.766131	TTGGTCAAAGTTAGCCCCGA	59.234	50.000	0.00	0.00	0.00	5.14
4965	7729	1.611519	TTTGGTCAAAGTTAGCCCCG	58.388	50.000	0.00	0.00	0.00	5.73
4966	7730	5.932619	AATATTTGGTCAAAGTTAGCCCC	57.067	39.130	2.55	0.00	33.32	5.80
4967	7731	7.468768	GCTCTAATATTTGGTCAAAGTTAGCCC	60.469	40.741	17.32	11.38	35.14	5.19
4968	7732	7.067008	TGCTCTAATATTTGGTCAAAGTTAGCC	59.933	37.037	17.32	13.62	35.14	3.93
4969	7733	7.985476	TGCTCTAATATTTGGTCAAAGTTAGC	58.015	34.615	17.32	13.47	35.14	3.09
4988	7752	9.948964	AGTTGCATGTCATATATTATTGCTCTA	57.051	29.630	0.00	0.00	0.00	2.43
4989	7753	8.859236	AGTTGCATGTCATATATTATTGCTCT	57.141	30.769	0.00	0.00	0.00	4.09
4998	7762	8.131100	GCTTTGTGTAAGTTGCATGTCATATAT	58.869	33.333	0.00	0.00	36.19	0.86
4999	7763	7.120432	TGCTTTGTGTAAGTTGCATGTCATATA	59.880	33.333	0.00	0.00	36.19	0.86
5000	7764	6.072008	TGCTTTGTGTAAGTTGCATGTCATAT	60.072	34.615	0.00	0.00	36.19	1.78
5001	7765	5.240403	TGCTTTGTGTAAGTTGCATGTCATA	59.760	36.000	0.00	0.00	36.19	2.15
5002	7766	4.037803	TGCTTTGTGTAAGTTGCATGTCAT	59.962	37.500	0.00	0.00	36.19	3.06
5003	7767	3.379688	TGCTTTGTGTAAGTTGCATGTCA	59.620	39.130	0.00	0.00	36.19	3.58
5004	7768	3.730715	GTGCTTTGTGTAAGTTGCATGTC	59.269	43.478	0.00	0.00	36.19	3.06
5005	7769	3.130164	TGTGCTTTGTGTAAGTTGCATGT	59.870	39.130	0.00	0.00	36.19	3.21
5006	7770	3.486841	GTGTGCTTTGTGTAAGTTGCATG	59.513	43.478	0.00	0.00	36.19	4.06
5007	7771	3.490761	GGTGTGCTTTGTGTAAGTTGCAT	60.491	43.478	0.00	0.00	36.19	3.96
5008	7772	2.159310	GGTGTGCTTTGTGTAAGTTGCA	60.159	45.455	0.00	0.00	36.19	4.08
5009	7773	2.459934	GGTGTGCTTTGTGTAAGTTGC	58.540	47.619	0.00	0.00	36.19	4.17
5010	7774	2.096819	ACGGTGTGCTTTGTGTAAGTTG	59.903	45.455	0.00	0.00	36.19	3.16
5011	7775	2.361789	ACGGTGTGCTTTGTGTAAGTT	58.638	42.857	0.00	0.00	36.19	2.66
5012	7776	2.032680	ACGGTGTGCTTTGTGTAAGT	57.967	45.000	0.00	0.00	36.19	2.24
5013	7777	4.539509	TTAACGGTGTGCTTTGTGTAAG	57.460	40.909	0.00	0.00	36.90	2.34
5014	7778	4.959596	TTTAACGGTGTGCTTTGTGTAA	57.040	36.364	0.00	0.00	0.00	2.41
5015	7779	5.502153	AATTTAACGGTGTGCTTTGTGTA	57.498	34.783	0.00	0.00	0.00	2.90
5016	7780	4.356289	GAATTTAACGGTGTGCTTTGTGT	58.644	39.130	0.00	0.00	0.00	3.72
5017	7781	3.420576	CGAATTTAACGGTGTGCTTTGTG	59.579	43.478	0.00	0.00	0.00	3.33
5018	7782	3.065648	ACGAATTTAACGGTGTGCTTTGT	59.934	39.130	0.00	0.00	34.93	2.83
5019	7783	3.420576	CACGAATTTAACGGTGTGCTTTG	59.579	43.478	0.00	0.00	34.93	2.77
5020	7784	3.065648	ACACGAATTTAACGGTGTGCTTT	59.934	39.130	0.00	0.00	34.93	3.51
5021	7785	2.614983	ACACGAATTTAACGGTGTGCTT	59.385	40.909	0.00	0.00	34.93	3.91
5022	7786	2.032377	CACACGAATTTAACGGTGTGCT	60.032	45.455	9.81	0.00	36.70	4.40
5023	7787	2.286536	ACACACGAATTTAACGGTGTGC	60.287	45.455	19.53	0.00	41.40	4.57
5024	7788	3.284914	CACACACGAATTTAACGGTGTG	58.715	45.455	18.39	18.39	45.49	3.82
5025	7789	3.196463	TCACACACGAATTTAACGGTGT	58.804	40.909	0.00	0.00	41.61	4.16
5026	7790	3.863396	TCACACACGAATTTAACGGTG	57.137	42.857	0.00	0.00	37.66	4.94
5027	7791	4.260866	CCTTTCACACACGAATTTAACGGT	60.261	41.667	0.00	0.00	34.93	4.83
5028	7792	4.024725	TCCTTTCACACACGAATTTAACGG	60.025	41.667	0.00	0.00	34.93	4.44
5029	7793	5.085636	TCCTTTCACACACGAATTTAACG	57.914	39.130	0.00	0.00	0.00	3.18
5030	7794	4.909880	GCTCCTTTCACACACGAATTTAAC	59.090	41.667	0.00	0.00	0.00	2.01
5031	7795	4.819630	AGCTCCTTTCACACACGAATTTAA	59.180	37.500	0.00	0.00	0.00	1.52
5032	7796	4.385825	AGCTCCTTTCACACACGAATTTA	58.614	39.130	0.00	0.00	0.00	1.40
5033	7797	3.214328	AGCTCCTTTCACACACGAATTT	58.786	40.909	0.00	0.00	0.00	1.82
5034	7798	2.851195	AGCTCCTTTCACACACGAATT	58.149	42.857	0.00	0.00	0.00	2.17
5035	7799	2.550830	AGCTCCTTTCACACACGAAT	57.449	45.000	0.00	0.00	0.00	3.34
5036	7800	2.325583	AAGCTCCTTTCACACACGAA	57.674	45.000	0.00	0.00	0.00	3.85
5037	7801	2.210116	GAAAGCTCCTTTCACACACGA	58.790	47.619	11.65	0.00	46.23	4.35
5038	7802	2.670401	GAAAGCTCCTTTCACACACG	57.330	50.000	11.65	0.00	46.23	4.49
5059	7823	8.984764	GCATGCACAATGTGAAAATTATATCAT	58.015	29.630	18.66	3.91	38.65	2.45
5060	7824	7.438757	GGCATGCACAATGTGAAAATTATATCA	59.561	33.333	21.36	1.49	38.65	2.15
5061	7825	7.438757	TGGCATGCACAATGTGAAAATTATATC	59.561	33.333	21.36	0.00	38.65	1.63
5062	7826	7.273712	TGGCATGCACAATGTGAAAATTATAT	58.726	30.769	21.36	0.00	38.65	0.86
5063	7827	6.637657	TGGCATGCACAATGTGAAAATTATA	58.362	32.000	21.36	0.00	38.65	0.98
5064	7828	5.489249	TGGCATGCACAATGTGAAAATTAT	58.511	33.333	21.36	0.00	38.65	1.28
5065	7829	4.891260	TGGCATGCACAATGTGAAAATTA	58.109	34.783	21.36	0.00	38.65	1.40
5066	7830	3.741249	TGGCATGCACAATGTGAAAATT	58.259	36.364	21.36	0.00	38.65	1.82
5067	7831	3.404224	TGGCATGCACAATGTGAAAAT	57.596	38.095	21.36	4.25	38.65	1.82
5068	7832	2.904697	TGGCATGCACAATGTGAAAA	57.095	40.000	21.36	1.78	38.65	2.29
5069	7833	2.037381	ACATGGCATGCACAATGTGAAA	59.963	40.909	26.70	4.52	38.65	2.69
5070	7834	1.619332	ACATGGCATGCACAATGTGAA	59.381	42.857	26.70	7.14	38.65	3.18
5071	7835	1.258676	ACATGGCATGCACAATGTGA	58.741	45.000	26.70	2.72	38.65	3.58
5072	7836	2.164827	AGTACATGGCATGCACAATGTG	59.835	45.455	28.88	18.37	38.65	3.21
5073	7837	2.449464	AGTACATGGCATGCACAATGT	58.551	42.857	27.73	26.18	38.65	2.71
5074	7838	4.841443	ATAGTACATGGCATGCACAATG	57.159	40.909	27.73	20.39	39.49	2.82
5075	7839	6.957920	TTAATAGTACATGGCATGCACAAT	57.042	33.333	27.73	17.14	0.00	2.71
5076	7840	6.772233	AGATTAATAGTACATGGCATGCACAA	59.228	34.615	27.73	16.03	0.00	3.33
5077	7841	6.298361	AGATTAATAGTACATGGCATGCACA	58.702	36.000	27.73	15.35	0.00	4.57
5078	7842	6.808008	AGATTAATAGTACATGGCATGCAC	57.192	37.500	26.70	23.59	0.00	4.57
5079	7843	6.772233	ACAAGATTAATAGTACATGGCATGCA	59.228	34.615	26.70	12.32	0.00	3.96
5080	7844	7.041167	TGACAAGATTAATAGTACATGGCATGC	60.041	37.037	26.70	9.90	0.00	4.06
5081	7845	8.382030	TGACAAGATTAATAGTACATGGCATG	57.618	34.615	25.31	25.31	0.00	4.06
5082	7846	8.978874	TTGACAAGATTAATAGTACATGGCAT	57.021	30.769	0.00	0.00	0.00	4.40
5083	7847	8.978874	ATTGACAAGATTAATAGTACATGGCA	57.021	30.769	0.00	0.00	0.00	4.92
5094	7858	8.960591	CCACCTTTGACTATTGACAAGATTAAT	58.039	33.333	0.00	0.00	0.00	1.40
5095	7859	7.942341	ACCACCTTTGACTATTGACAAGATTAA	59.058	33.333	0.00	0.00	0.00	1.40
5096	7860	7.458397	ACCACCTTTGACTATTGACAAGATTA	58.542	34.615	0.00	0.00	0.00	1.75
5097	7861	6.306987	ACCACCTTTGACTATTGACAAGATT	58.693	36.000	0.00	0.00	0.00	2.40
5098	7862	5.880901	ACCACCTTTGACTATTGACAAGAT	58.119	37.500	0.00	0.00	0.00	2.40
5099	7863	5.071788	AGACCACCTTTGACTATTGACAAGA	59.928	40.000	0.00	0.00	0.00	3.02
5100	7864	5.308825	AGACCACCTTTGACTATTGACAAG	58.691	41.667	0.00	0.00	0.00	3.16
5101	7865	5.304686	AGACCACCTTTGACTATTGACAA	57.695	39.130	0.00	0.00	0.00	3.18
5102	7866	4.974645	AGACCACCTTTGACTATTGACA	57.025	40.909	0.00	0.00	0.00	3.58
5103	7867	7.739498	TTTAAGACCACCTTTGACTATTGAC	57.261	36.000	0.00	0.00	36.34	3.18
5104	7868	8.754991	TTTTTAAGACCACCTTTGACTATTGA	57.245	30.769	0.00	0.00	36.34	2.57
5126	7890	6.775708	TCTATATAGGGCCTAATGCGTTTTT	58.224	36.000	18.91	0.00	42.61	1.94
5127	7891	6.368779	TCTATATAGGGCCTAATGCGTTTT	57.631	37.500	18.91	0.30	42.61	2.43
5128	7892	6.349300	CATCTATATAGGGCCTAATGCGTTT	58.651	40.000	18.91	1.12	42.61	3.60
5129	7893	5.163301	CCATCTATATAGGGCCTAATGCGTT	60.163	44.000	18.91	1.94	42.61	4.84
5130	7894	4.345257	CCATCTATATAGGGCCTAATGCGT	59.655	45.833	18.91	2.76	42.61	5.24
5131	7895	4.588951	TCCATCTATATAGGGCCTAATGCG	59.411	45.833	18.91	10.04	42.61	4.73
5132	7896	6.465035	CCTTCCATCTATATAGGGCCTAATGC	60.465	46.154	18.91	0.00	40.16	3.56
5133	7897	6.846505	TCCTTCCATCTATATAGGGCCTAATG	59.153	42.308	18.91	15.42	0.00	1.90
5134	7898	7.009960	TCCTTCCATCTATATAGGGCCTAAT	57.990	40.000	18.91	14.19	0.00	1.73
5135	7899	6.432190	TCCTTCCATCTATATAGGGCCTAA	57.568	41.667	18.91	7.61	0.00	2.69
5136	7900	5.103043	CCTCCTTCCATCTATATAGGGCCTA	60.103	48.000	17.16	17.16	0.00	3.93
5137	7901	4.327332	CCTCCTTCCATCTATATAGGGCCT	60.327	50.000	12.58	12.58	0.00	5.19
5138	7902	3.970640	CCTCCTTCCATCTATATAGGGCC	59.029	52.174	9.89	0.00	0.00	5.80
5139	7903	3.970640	CCCTCCTTCCATCTATATAGGGC	59.029	52.174	9.89	0.00	36.30	5.19
5140	7904	5.042979	ACTCCCTCCTTCCATCTATATAGGG	60.043	48.000	9.89	4.49	43.23	3.53
5141	7905	6.098716	ACTCCCTCCTTCCATCTATATAGG	57.901	45.833	9.89	0.00	0.00	2.57
5142	7906	7.129660	TCCTACTCCCTCCTTCCATCTATATAG	59.870	44.444	3.10	3.10	0.00	1.31
5143	7907	6.978484	TCCTACTCCCTCCTTCCATCTATATA	59.022	42.308	0.00	0.00	0.00	0.86
5144	7908	5.803855	TCCTACTCCCTCCTTCCATCTATAT	59.196	44.000	0.00	0.00	0.00	0.86
5145	7909	5.178614	TCCTACTCCCTCCTTCCATCTATA	58.821	45.833	0.00	0.00	0.00	1.31
5146	7910	3.997856	TCCTACTCCCTCCTTCCATCTAT	59.002	47.826	0.00	0.00	0.00	1.98
5147	7911	3.414057	TCCTACTCCCTCCTTCCATCTA	58.586	50.000	0.00	0.00	0.00	1.98
5148	7912	2.227703	TCCTACTCCCTCCTTCCATCT	58.772	52.381	0.00	0.00	0.00	2.90
5149	7913	2.777459	TCCTACTCCCTCCTTCCATC	57.223	55.000	0.00	0.00	0.00	3.51
5150	7914	3.116174	GTTTCCTACTCCCTCCTTCCAT	58.884	50.000	0.00	0.00	0.00	3.41
5151	7915	2.113777	AGTTTCCTACTCCCTCCTTCCA	59.886	50.000	0.00	0.00	28.23	3.53
5152	7916	2.835389	AGTTTCCTACTCCCTCCTTCC	58.165	52.381	0.00	0.00	28.23	3.46
5153	7917	6.563037	ATTAAGTTTCCTACTCCCTCCTTC	57.437	41.667	0.00	0.00	35.54	3.46
5154	7918	7.905106	TCTTATTAAGTTTCCTACTCCCTCCTT	59.095	37.037	3.45	0.00	35.54	3.36
5155	7919	7.428335	TCTTATTAAGTTTCCTACTCCCTCCT	58.572	38.462	3.45	0.00	35.54	3.69
5156	7920	7.672122	TCTTATTAAGTTTCCTACTCCCTCC	57.328	40.000	3.45	0.00	35.54	4.30
5157	7921	9.955102	TTTTCTTATTAAGTTTCCTACTCCCTC	57.045	33.333	3.45	0.00	35.54	4.30
5299	8063	5.470777	CCAATTCACATTGTTTTTGGCTCAT	59.529	36.000	8.45	0.00	38.58	2.90
5437	8202	3.118629	GCTGTGAGAGAGAGAGAGAGAGA	60.119	52.174	0.00	0.00	0.00	3.10
5438	8203	3.201290	GCTGTGAGAGAGAGAGAGAGAG	58.799	54.545	0.00	0.00	0.00	3.20
5439	8204	2.571202	TGCTGTGAGAGAGAGAGAGAGA	59.429	50.000	0.00	0.00	0.00	3.10
5440	8205	2.989909	TGCTGTGAGAGAGAGAGAGAG	58.010	52.381	0.00	0.00	0.00	3.20
5441	8206	3.281158	CATGCTGTGAGAGAGAGAGAGA	58.719	50.000	0.00	0.00	0.00	3.10
5442	8207	2.223641	GCATGCTGTGAGAGAGAGAGAG	60.224	54.545	11.37	0.00	0.00	3.20
5466	8231	3.638860	ACCCATGTCATGCTGAATGAAT	58.361	40.909	7.35	0.00	46.90	2.57
5580	8349	4.062490	AGAGGGTGAGTGGTTAGTGTAT	57.938	45.455	0.00	0.00	0.00	2.29
5716	8485	1.055849	TTTGTCTGTCCAGCTAGCCA	58.944	50.000	12.13	0.64	0.00	4.75
6219	9007	7.764443	TCATAGAAAGTTTCCCTCGTATCAAAG	59.236	37.037	12.05	0.00	0.00	2.77
6408	9247	0.165944	CATGTCGACAAGGGCGTTTC	59.834	55.000	24.13	0.00	0.00	2.78
6489	9330	9.326413	TCGATTCTTCATTTACCCTTCTTATTC	57.674	33.333	0.00	0.00	0.00	1.75
6655	9496	1.084289	CCCGAGTCCCGTTTTTGATC	58.916	55.000	0.00	0.00	36.31	2.92
6687	9528	4.279420	CGATCATCTCATCCTACCTGTTCA	59.721	45.833	0.00	0.00	0.00	3.18
7017	9895	5.774690	AGCTGGATTAATTTGTTCTGTCCAA	59.225	36.000	0.00	0.00	34.21	3.53
7260	10148	2.265182	CCCAACCAACGTCGCCAAT	61.265	57.895	0.00	0.00	0.00	3.16
7383	10276	2.284625	ACCAGGTCGCCAGATCCA	60.285	61.111	0.00	0.00	0.00	3.41
7418	10311	1.609210	TCGTCCTCTGCATGGTGGA	60.609	57.895	0.00	0.00	0.00	4.02
7511	10641	2.412112	CCTCCTGTACTACGCGGC	59.588	66.667	12.47	0.00	0.00	6.53
7536	10666	2.679059	CGGTGATGCCAAGACTGAGATT	60.679	50.000	0.00	0.00	36.97	2.40
7576	10706	2.447765	CCCCGCCCCAATCCTCTA	60.448	66.667	0.00	0.00	0.00	2.43
7600	10730	4.796495	ATCCTCGCAAACCGCCCC	62.796	66.667	0.00	0.00	37.30	5.80
7601	10731	3.508840	CATCCTCGCAAACCGCCC	61.509	66.667	0.00	0.00	37.30	6.13
7602	10732	2.435938	TCATCCTCGCAAACCGCC	60.436	61.111	0.00	0.00	37.30	6.13
7603	10733	2.750888	GGTCATCCTCGCAAACCGC	61.751	63.158	0.00	0.00	36.73	5.68
7609	10739	3.785859	GCCTGGGTCATCCTCGCA	61.786	66.667	0.00	0.00	36.20	5.10
7669	10799	5.813080	AAAAATCAACCCTCGCTATACAC	57.187	39.130	0.00	0.00	0.00	2.90
7711	10841	4.329545	TGACCCAACTCTGCCCGC	62.330	66.667	0.00	0.00	0.00	6.13
7713	10843	1.302832	CACTGACCCAACTCTGCCC	60.303	63.158	0.00	0.00	0.00	5.36
7716	10846	2.839486	TTAGCACTGACCCAACTCTG	57.161	50.000	0.00	0.00	0.00	3.35
7749	10879	4.524328	CAGCCTAAATTCACCCAGTCTTTT	59.476	41.667	0.00	0.00	0.00	2.27
7755	10885	2.493278	CCAACAGCCTAAATTCACCCAG	59.507	50.000	0.00	0.00	0.00	4.45
7846	10976	9.761504	CCATCATTCACCACATCTATCTATATC	57.238	37.037	0.00	0.00	0.00	1.63
7847	10977	9.276791	ACCATCATTCACCACATCTATCTATAT	57.723	33.333	0.00	0.00	0.00	0.86
7848	10978	8.534496	CACCATCATTCACCACATCTATCTATA	58.466	37.037	0.00	0.00	0.00	1.31
8064	11196	6.173427	ACATAACCCTTGTTTGCTCAATTT	57.827	33.333	0.00	0.00	35.87	1.82
8196	11328	0.605319	TCACCGCCTTTGCCTACAAG	60.605	55.000	0.00	0.00	37.04	3.16
8784	14227	2.020720	TGGTCGCAACTCACAAACATT	58.979	42.857	0.00	0.00	0.00	2.71
8850	14297	8.935614	ATGATGATGATGATGTTAGAAATGGT	57.064	30.769	0.00	0.00	0.00	3.55
8861	14308	7.172361	GGCATGATAGAGATGATGATGATGATG	59.828	40.741	0.00	0.00	28.72	3.07
8862	14309	7.220740	GGCATGATAGAGATGATGATGATGAT	58.779	38.462	0.00	0.00	28.72	2.45
8863	14310	6.583562	GGCATGATAGAGATGATGATGATGA	58.416	40.000	0.00	0.00	28.72	2.92
8908	14355	6.194796	ACACAGGTCAAATTGGATAAATCG	57.805	37.500	0.00	0.00	0.00	3.34
8950	14402	2.167075	GCTTGGCCTACTTGCATTTGAT	59.833	45.455	3.32	0.00	0.00	2.57
8958	14410	4.381932	CCCTTTTATTGCTTGGCCTACTTG	60.382	45.833	3.32	0.00	0.00	3.16
8970	14422	2.411748	GCGAAAACAGCCCTTTTATTGC	59.588	45.455	0.00	0.00	0.00	3.56
8982	14434	2.246993	TAATGCGCCCGCGAAAACAG	62.247	55.000	14.24	0.00	45.51	3.16
8983	14435	1.649390	ATAATGCGCCCGCGAAAACA	61.649	50.000	14.24	0.00	45.51	2.83
8984	14436	0.524604	AATAATGCGCCCGCGAAAAC	60.525	50.000	14.24	0.00	45.51	2.43
8985	14437	1.015109	TAATAATGCGCCCGCGAAAA	58.985	45.000	14.24	0.00	45.51	2.29
8986	14438	1.231221	ATAATAATGCGCCCGCGAAA	58.769	45.000	14.24	0.00	45.51	3.46
8987	14439	1.231221	AATAATAATGCGCCCGCGAA	58.769	45.000	14.24	1.63	45.51	4.70
8988	14440	1.069568	CAAATAATAATGCGCCCGCGA	60.070	47.619	14.24	0.00	45.51	5.87
8989	14441	1.069568	TCAAATAATAATGCGCCCGCG	60.070	47.619	4.18	4.36	45.51	6.46
8990	14442	2.584791	CTCAAATAATAATGCGCCCGC	58.415	47.619	4.18	5.60	42.35	6.13
8991	14443	2.552315	ACCTCAAATAATAATGCGCCCG	59.448	45.455	4.18	0.00	0.00	6.13
8992	14444	5.009210	TGTTACCTCAAATAATAATGCGCCC	59.991	40.000	4.18	0.00	0.00	6.13
8993	14445	6.067263	TGTTACCTCAAATAATAATGCGCC	57.933	37.500	4.18	0.00	0.00	6.53
8994	14446	7.359595	TGATGTTACCTCAAATAATAATGCGC	58.640	34.615	0.00	0.00	0.00	6.09
8995	14447	8.559536	ACTGATGTTACCTCAAATAATAATGCG	58.440	33.333	0.00	0.00	0.00	4.73
8996	14448	9.669353	CACTGATGTTACCTCAAATAATAATGC	57.331	33.333	0.00	0.00	0.00	3.56
8997	14449	9.669353	GCACTGATGTTACCTCAAATAATAATG	57.331	33.333	0.00	0.00	0.00	1.90
8998	14450	9.632638	AGCACTGATGTTACCTCAAATAATAAT	57.367	29.630	0.00	0.00	0.00	1.28
9000	14452	9.764363	CTAGCACTGATGTTACCTCAAATAATA	57.236	33.333	0.00	0.00	0.00	0.98
9006	14458	4.526650	TGACTAGCACTGATGTTACCTCAA	59.473	41.667	0.00	0.00	0.00	3.02
9007	14459	4.086457	TGACTAGCACTGATGTTACCTCA	58.914	43.478	0.00	0.00	0.00	3.86
9015	14467	5.233902	GCAAGTTCTATGACTAGCACTGATG	59.766	44.000	0.00	0.00	32.66	3.07
9020	14472	5.111989	TGATGCAAGTTCTATGACTAGCAC	58.888	41.667	0.00	0.00	33.18	4.40
9021	14473	5.127682	TCTGATGCAAGTTCTATGACTAGCA	59.872	40.000	0.00	0.00	35.03	3.49
9023	14475	7.169476	CACATCTGATGCAAGTTCTATGACTAG	59.831	40.741	17.24	0.00	0.00	2.57
9024	14476	6.982724	CACATCTGATGCAAGTTCTATGACTA	59.017	38.462	17.24	0.00	0.00	2.59
9039	14491	2.670229	GCACCAAACTGCACATCTGATG	60.670	50.000	15.83	15.83	37.11	3.07
9041	14493	0.953727	GCACCAAACTGCACATCTGA	59.046	50.000	0.00	0.00	37.11	3.27
9042	14494	0.956633	AGCACCAAACTGCACATCTG	59.043	50.000	0.00	0.00	39.86	2.90
9043	14495	2.566833	TAGCACCAAACTGCACATCT	57.433	45.000	0.00	0.00	39.86	2.90
9044	14496	3.641437	TTTAGCACCAAACTGCACATC	57.359	42.857	0.00	0.00	39.86	3.06
9045	14497	3.384467	AGTTTTAGCACCAAACTGCACAT	59.616	39.130	7.03	0.00	41.86	3.21
9046	14498	2.757868	AGTTTTAGCACCAAACTGCACA	59.242	40.909	7.03	0.00	41.86	4.57
9047	14499	3.436700	AGTTTTAGCACCAAACTGCAC	57.563	42.857	7.03	0.00	41.86	4.57
9048	14500	4.464069	AAAGTTTTAGCACCAAACTGCA	57.536	36.364	8.26	0.00	42.47	4.41
9049	14501	8.582433	TTATTAAAGTTTTAGCACCAAACTGC	57.418	30.769	8.26	0.00	42.47	4.40
9053	14505	9.843334	CCGTATTATTAAAGTTTTAGCACCAAA	57.157	29.630	0.00	0.00	0.00	3.28
9054	14506	9.012161	ACCGTATTATTAAAGTTTTAGCACCAA	57.988	29.630	0.00	0.00	0.00	3.67
9055	14507	8.564509	ACCGTATTATTAAAGTTTTAGCACCA	57.435	30.769	0.00	0.00	0.00	4.17
9056	14508	9.844790	AAACCGTATTATTAAAGTTTTAGCACC	57.155	29.630	0.00	0.00	0.00	5.01
9063	14515	9.777575	CATCCGAAAACCGTATTATTAAAGTTT	57.222	29.630	0.00	0.00	36.31	2.66
9064	14516	8.949177	ACATCCGAAAACCGTATTATTAAAGTT	58.051	29.630	0.00	0.00	36.31	2.66
9065	14517	8.392612	CACATCCGAAAACCGTATTATTAAAGT	58.607	33.333	0.00	0.00	36.31	2.66
9066	14518	7.375017	GCACATCCGAAAACCGTATTATTAAAG	59.625	37.037	0.00	0.00	36.31	1.85
9067	14519	7.148289	TGCACATCCGAAAACCGTATTATTAAA	60.148	33.333	0.00	0.00	36.31	1.52
9068	14520	6.315642	TGCACATCCGAAAACCGTATTATTAA	59.684	34.615	0.00	0.00	36.31	1.40
9069	14521	5.816258	TGCACATCCGAAAACCGTATTATTA	59.184	36.000	0.00	0.00	36.31	0.98
9070	14522	4.636648	TGCACATCCGAAAACCGTATTATT	59.363	37.500	0.00	0.00	36.31	1.40
9071	14523	4.193090	TGCACATCCGAAAACCGTATTAT	58.807	39.130	0.00	0.00	36.31	1.28
9072	14524	3.597255	TGCACATCCGAAAACCGTATTA	58.403	40.909	0.00	0.00	36.31	0.98
9073	14525	2.418628	CTGCACATCCGAAAACCGTATT	59.581	45.455	0.00	0.00	36.31	1.89
9074	14526	2.006888	CTGCACATCCGAAAACCGTAT	58.993	47.619	0.00	0.00	36.31	3.06
9075	14527	1.270412	ACTGCACATCCGAAAACCGTA	60.270	47.619	0.00	0.00	36.31	4.02
9076	14528	0.534203	ACTGCACATCCGAAAACCGT	60.534	50.000	0.00	0.00	36.31	4.83
9077	14529	0.591170	AACTGCACATCCGAAAACCG	59.409	50.000	0.00	0.00	38.18	4.44
9078	14530	2.393764	CAAACTGCACATCCGAAAACC	58.606	47.619	0.00	0.00	0.00	3.27
9079	14531	2.223711	ACCAAACTGCACATCCGAAAAC	60.224	45.455	0.00	0.00	0.00	2.43
9080	14532	2.028130	ACCAAACTGCACATCCGAAAA	58.972	42.857	0.00	0.00	0.00	2.29
9081	14533	1.336440	CACCAAACTGCACATCCGAAA	59.664	47.619	0.00	0.00	0.00	3.46
9082	14534	0.950836	CACCAAACTGCACATCCGAA	59.049	50.000	0.00	0.00	0.00	4.30
9126	14578	7.413438	GCACCTAAACACAAGTTAGATCATCAG	60.413	40.741	0.00	0.00	36.84	2.90
9128	14580	6.371548	TGCACCTAAACACAAGTTAGATCATC	59.628	38.462	0.00	0.00	36.84	2.92
9214	14666	1.079819	CACTGACAGTAGGCCCGTG	60.080	63.158	8.02	0.00	0.00	4.94
9222	14674	5.561679	AGGCGATATCTATCACTGACAGTA	58.438	41.667	8.02	0.00	32.98	2.74
9223	14675	4.402829	AGGCGATATCTATCACTGACAGT	58.597	43.478	1.07	1.07	32.98	3.55
9250	14702	1.079819	CACTGACAGTAGGCCCGTG	60.080	63.158	8.02	0.00	0.00	4.94
9251	14703	0.614979	ATCACTGACAGTAGGCCCGT	60.615	55.000	8.02	0.00	0.00	5.28
9253	14705	2.667470	TCTATCACTGACAGTAGGCCC	58.333	52.381	8.02	0.00	0.00	5.80
9254	14706	5.163703	CGATATCTATCACTGACAGTAGGCC	60.164	48.000	8.02	0.00	32.98	5.19
9257	14709	5.645929	AGGCGATATCTATCACTGACAGTAG	59.354	44.000	8.02	2.49	32.98	2.57
9258	14710	5.561679	AGGCGATATCTATCACTGACAGTA	58.438	41.667	8.02	0.00	32.98	2.74
9261	14713	5.416013	CCTTAGGCGATATCTATCACTGACA	59.584	44.000	0.34	0.00	32.98	3.58
9262	14714	5.163602	CCCTTAGGCGATATCTATCACTGAC	60.164	48.000	0.34	0.00	32.98	3.51
9264	14716	4.098654	CCCCTTAGGCGATATCTATCACTG	59.901	50.000	0.34	0.00	32.98	3.66
9265	14717	4.282496	CCCCTTAGGCGATATCTATCACT	58.718	47.826	0.34	0.00	32.98	3.41
9266	14718	4.657436	CCCCTTAGGCGATATCTATCAC	57.343	50.000	0.34	0.00	32.98	3.06
9279	14731	2.746277	GTGCACGTGCCCCTTAGG	60.746	66.667	35.72	0.00	41.18	2.69
9280	14732	0.960364	AATGTGCACGTGCCCCTTAG	60.960	55.000	35.72	0.00	41.18	2.18
9281	14733	0.538516	AAATGTGCACGTGCCCCTTA	60.539	50.000	35.72	15.93	41.18	2.69
9282	14734	1.398958	AAAATGTGCACGTGCCCCTT	61.399	50.000	35.72	21.81	41.18	3.95
9283	14735	1.398958	AAAAATGTGCACGTGCCCCT	61.399	50.000	35.72	16.78	41.18	4.79
9284	14736	0.315568	TAAAAATGTGCACGTGCCCC	59.684	50.000	35.72	25.98	41.18	5.80
9285	14737	2.362169	ATAAAAATGTGCACGTGCCC	57.638	45.000	35.72	26.78	41.18	5.36
9286	14738	4.453339	CAAAATAAAAATGTGCACGTGCC	58.547	39.130	35.72	26.31	41.18	5.01
9287	14739	3.899531	GCAAAATAAAAATGTGCACGTGC	59.100	39.130	33.11	33.11	42.50	5.34
9288	14740	5.051173	TCTGCAAAATAAAAATGTGCACGTG	60.051	36.000	13.39	12.28	40.14	4.49
9289	14741	5.046529	TCTGCAAAATAAAAATGTGCACGT	58.953	33.333	13.13	9.52	40.14	4.49
9290	14742	5.573296	TCTGCAAAATAAAAATGTGCACG	57.427	34.783	13.13	0.00	40.14	5.34
9291	14743	7.096925	GCTTTTCTGCAAAATAAAAATGTGCAC	60.097	33.333	10.75	10.75	40.14	4.57
9292	14744	6.911511	GCTTTTCTGCAAAATAAAAATGTGCA	59.088	30.769	0.00	0.00	42.62	4.57
9293	14745	6.360414	GGCTTTTCTGCAAAATAAAAATGTGC	59.640	34.615	0.00	0.00	30.91	4.57
9294	14746	6.857451	GGGCTTTTCTGCAAAATAAAAATGTG	59.143	34.615	0.00	0.00	30.91	3.21
9295	14747	6.772233	AGGGCTTTTCTGCAAAATAAAAATGT	59.228	30.769	0.00	0.00	30.91	2.71
9296	14748	7.041235	TGAGGGCTTTTCTGCAAAATAAAAATG	60.041	33.333	0.00	0.00	30.91	2.32
9297	14749	6.997476	TGAGGGCTTTTCTGCAAAATAAAAAT	59.003	30.769	0.00	0.00	30.91	1.82
9298	14750	6.352516	TGAGGGCTTTTCTGCAAAATAAAAA	58.647	32.000	0.00	0.00	30.91	1.94
9299	14751	5.923204	TGAGGGCTTTTCTGCAAAATAAAA	58.077	33.333	0.00	0.00	30.91	1.52
9300	14752	5.543507	TGAGGGCTTTTCTGCAAAATAAA	57.456	34.783	0.00	0.00	30.91	1.40
9301	14753	5.543507	TTGAGGGCTTTTCTGCAAAATAA	57.456	34.783	0.00	0.00	30.91	1.40
9302	14754	5.543507	TTTGAGGGCTTTTCTGCAAAATA	57.456	34.783	0.00	0.00	30.91	1.40
9303	14755	4.420522	TTTGAGGGCTTTTCTGCAAAAT	57.579	36.364	0.00	0.00	30.91	1.82
9304	14756	3.902881	TTTGAGGGCTTTTCTGCAAAA	57.097	38.095	0.00	0.00	34.04	2.44
9305	14757	4.420522	AATTTGAGGGCTTTTCTGCAAA	57.579	36.364	0.00	0.00	34.04	3.68
9306	14758	4.420522	AAATTTGAGGGCTTTTCTGCAA	57.579	36.364	0.00	0.00	34.04	4.08
9307	14759	5.743636	ATAAATTTGAGGGCTTTTCTGCA	57.256	34.783	0.00	0.00	34.04	4.41
9308	14760	8.722480	AATAATAAATTTGAGGGCTTTTCTGC	57.278	30.769	0.00	0.00	0.00	4.26
9311	14763	9.773328	GCAAAATAATAAATTTGAGGGCTTTTC	57.227	29.630	0.00	0.00	38.50	2.29
9312	14764	9.294614	TGCAAAATAATAAATTTGAGGGCTTTT	57.705	25.926	0.00	0.00	38.50	2.27
9313	14765	8.860780	TGCAAAATAATAAATTTGAGGGCTTT	57.139	26.923	0.00	0.00	38.50	3.51
9314	14766	8.320617	TCTGCAAAATAATAAATTTGAGGGCTT	58.679	29.630	0.00	0.00	38.50	4.35
9315	14767	7.850193	TCTGCAAAATAATAAATTTGAGGGCT	58.150	30.769	0.00	0.00	38.50	5.19
9316	14768	8.491331	TTCTGCAAAATAATAAATTTGAGGGC	57.509	30.769	0.00	0.00	38.50	5.19
9321	14773	9.558648	GGGCTTTTCTGCAAAATAATAAATTTG	57.441	29.630	0.00	0.00	39.08	2.32
9322	14774	9.519191	AGGGCTTTTCTGCAAAATAATAAATTT	57.481	25.926	0.00	0.00	30.91	1.82
9323	14775	9.166173	GAGGGCTTTTCTGCAAAATAATAAATT	57.834	29.630	0.00	0.00	30.91	1.82
9324	14776	8.320617	TGAGGGCTTTTCTGCAAAATAATAAAT	58.679	29.630	0.00	0.00	30.91	1.40
9325	14777	7.675062	TGAGGGCTTTTCTGCAAAATAATAAA	58.325	30.769	0.00	0.00	30.91	1.40
9328	14780	5.743636	TGAGGGCTTTTCTGCAAAATAAT	57.256	34.783	0.00	0.00	30.91	1.28
9350	14802	8.878769	GGCCATTGTTCGTAATTCAATAAATTT	58.121	29.630	0.00	0.00	38.53	1.82
9359	14811	2.096248	TGGGGCCATTGTTCGTAATTC	58.904	47.619	4.39	0.00	0.00	2.17
9414	14866	4.827835	TGTTATTTGGTCATGGGTTCGAAA	59.172	37.500	0.00	0.00	0.00	3.46
9452	14907	2.801077	ATTTGGTGTACTGGGTAGCC	57.199	50.000	3.29	3.29	0.00	3.93
9614	15073	7.321153	AGTTACGCTCATGTATTGTTAGACTT	58.679	34.615	0.00	0.00	0.00	3.01
9632	15091	5.106673	GCCCATATGAGGATTTAAGTTACGC	60.107	44.000	3.65	0.00	0.00	4.42
9744	15206	0.678395	AATTCATTGTTGCGGCACCA	59.322	45.000	0.05	0.00	0.00	4.17
9771	15233	3.383825	GCTCCGTCCCTATAGAAAAGTCA	59.616	47.826	0.00	0.00	0.00	3.41
9779	15241	1.977544	CCCGGCTCCGTCCCTATAG	60.978	68.421	7.59	0.00	37.81	1.31
9793	15255	2.107041	TTGTACAGTGGTCAGCCCGG	62.107	60.000	0.00	0.00	35.15	5.73

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.