Multiple sequence alignment - TraesCS2A01G323500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G323500 chr2A 100.000 9345 0 0 1 9345 553492859 553483515 0.000000e+00 17258.0
1 TraesCS2A01G323500 chr2A 91.176 340 20 2 7 345 662736567 662736237 3.980000e-123 453.0
2 TraesCS2A01G323500 chr2A 79.157 451 84 9 8866 9311 203002932 203002487 4.240000e-78 303.0
3 TraesCS2A01G323500 chr2A 78.193 321 60 8 8957 9272 24181132 24181447 7.400000e-46 196.0
4 TraesCS2A01G323500 chr2A 77.636 313 58 9 8957 9262 24276841 24277148 7.460000e-41 180.0
5 TraesCS2A01G323500 chr2D 97.511 4862 93 18 958 5811 433501488 433506329 0.000000e+00 8283.0
6 TraesCS2A01G323500 chr2D 95.494 2796 58 23 5667 8450 433506330 433509069 0.000000e+00 4403.0
7 TraesCS2A01G323500 chr2D 94.616 743 22 8 8620 9345 433509156 433509897 0.000000e+00 1134.0
8 TraesCS2A01G323500 chr2D 76.538 439 65 27 8868 9285 22786670 22786249 1.230000e-48 206.0
9 TraesCS2A01G323500 chr2B 92.079 4368 198 56 1115 5422 511271608 511275887 0.000000e+00 6013.0
10 TraesCS2A01G323500 chr2B 93.822 1813 59 14 6653 8451 511277147 511278920 0.000000e+00 2678.0
11 TraesCS2A01G323500 chr2B 95.327 1177 40 9 5421 6597 511275969 511277130 0.000000e+00 1855.0
12 TraesCS2A01G323500 chr2B 93.931 725 28 6 8637 9345 511278919 511279643 0.000000e+00 1081.0
13 TraesCS2A01G323500 chr2B 79.204 452 82 11 8866 9311 245006914 245006469 4.240000e-78 303.0
14 TraesCS2A01G323500 chr2B 78.528 326 53 12 8957 9275 39158164 39158479 2.060000e-46 198.0
15 TraesCS2A01G323500 chr2B 94.937 79 3 1 8462 8539 142245679 142245601 1.270000e-23 122.0
16 TraesCS2A01G323500 chr2B 84.034 119 14 5 8467 8582 657842366 657842250 9.920000e-20 110.0
17 TraesCS2A01G323500 chr2B 86.111 72 3 7 8539 8605 50284327 50284396 4.680000e-08 71.3
18 TraesCS2A01G323500 chr2B 84.932 73 4 7 8538 8605 549189820 549189750 6.060000e-07 67.6
19 TraesCS2A01G323500 chrUn 100.000 418 0 0 2968 3385 477061841 477062258 0.000000e+00 773.0
20 TraesCS2A01G323500 chrUn 91.014 345 22 1 1 345 176703746 176704081 3.080000e-124 457.0
21 TraesCS2A01G323500 chrUn 91.014 345 22 3 1 345 176737762 176738097 3.080000e-124 457.0
22 TraesCS2A01G323500 chrUn 91.014 345 22 1 1 345 454158926 454159261 3.080000e-124 457.0
23 TraesCS2A01G323500 chrUn 82.388 335 22 9 607 904 176704123 176704457 3.350000e-64 257.0
24 TraesCS2A01G323500 chrUn 82.388 335 22 5 607 904 176738139 176738473 3.350000e-64 257.0
25 TraesCS2A01G323500 chrUn 82.388 335 22 7 607 904 454159303 454159637 3.350000e-64 257.0
26 TraesCS2A01G323500 chrUn 91.089 101 8 1 6650 6749 474962432 474962332 1.640000e-27 135.0
27 TraesCS2A01G323500 chr4A 79.061 1108 158 50 5370 6430 487864299 487865379 0.000000e+00 693.0
28 TraesCS2A01G323500 chr4A 88.613 483 51 4 5771 6250 486641667 486642148 1.350000e-162 584.0
29 TraesCS2A01G323500 chr4A 80.000 660 110 20 2879 3526 487862057 487862706 1.420000e-127 468.0
30 TraesCS2A01G323500 chr4A 81.818 528 56 17 7314 7827 486642715 486643216 3.140000e-109 407.0
31 TraesCS2A01G323500 chr4A 78.082 365 64 15 4552 4904 486640549 486640909 5.680000e-52 217.0
32 TraesCS2A01G323500 chr4A 86.869 198 21 4 5475 5668 486641253 486641449 5.680000e-52 217.0
33 TraesCS2A01G323500 chr4A 98.611 72 1 0 8468 8539 691017922 691017851 2.740000e-25 128.0
34 TraesCS2A01G323500 chr4B 86.496 548 67 7 5771 6315 132854601 132854058 6.250000e-166 595.0
35 TraesCS2A01G323500 chr4B 80.455 660 107 20 2879 3526 132338509 132337860 1.410000e-132 484.0
36 TraesCS2A01G323500 chr4B 98.805 251 3 0 338 588 36970491 36970241 1.850000e-121 448.0
37 TraesCS2A01G323500 chr4B 78.502 721 94 28 7317 8017 132853543 132852864 5.220000e-112 416.0
38 TraesCS2A01G323500 chr4B 86.819 349 36 7 2880 3226 132856353 132856013 1.900000e-101 381.0
39 TraesCS2A01G323500 chr4B 87.755 196 21 3 5475 5668 132336178 132335984 9.440000e-55 226.0
40 TraesCS2A01G323500 chr4B 87.245 196 22 2 5475 5668 132855004 132854810 4.390000e-53 220.0
41 TraesCS2A01G323500 chr4B 80.612 294 49 7 4629 4916 132855622 132855331 4.390000e-53 220.0
42 TraesCS2A01G323500 chr4D 86.314 548 68 6 5771 6315 94260260 94259717 2.910000e-164 590.0
43 TraesCS2A01G323500 chr4D 78.121 713 111 28 7317 8017 94259223 94258544 2.430000e-110 411.0
44 TraesCS2A01G323500 chr4D 93.358 271 18 0 75 345 115193907 115193637 1.460000e-107 401.0
45 TraesCS2A01G323500 chr4D 87.538 329 15 6 607 909 115193595 115193267 3.210000e-94 357.0
46 TraesCS2A01G323500 chr4D 81.848 303 42 10 5371 5668 93845965 93845671 9.380000e-60 243.0
47 TraesCS2A01G323500 chr4D 87.755 196 21 2 5475 5668 94260662 94260468 9.440000e-55 226.0
48 TraesCS2A01G323500 chr4D 80.124 322 39 13 4671 4987 94261233 94260932 5.680000e-52 217.0
49 TraesCS2A01G323500 chr4D 89.147 129 5 1 1 129 115194008 115193889 1.630000e-32 152.0
50 TraesCS2A01G323500 chr4D 95.181 83 4 0 3 85 115194181 115194099 2.120000e-26 132.0
51 TraesCS2A01G323500 chr4D 94.872 78 4 0 8462 8539 164649549 164649472 1.270000e-23 122.0
52 TraesCS2A01G323500 chr4D 83.761 117 15 4 8468 8582 293613978 293614092 3.570000e-19 108.0
53 TraesCS2A01G323500 chr4D 100.000 44 0 0 8541 8584 491583115 491583072 2.160000e-11 82.4
54 TraesCS2A01G323500 chr3B 91.304 345 21 1 1 345 129302075 129302410 6.610000e-126 462.0
55 TraesCS2A01G323500 chr3B 91.369 336 20 1 10 345 713822111 713821785 1.430000e-122 451.0
56 TraesCS2A01G323500 chr3B 95.203 271 13 0 75 345 791769341 791769071 6.710000e-116 429.0
57 TraesCS2A01G323500 chr3B 87.307 323 15 5 607 904 791769031 791768710 6.950000e-91 346.0
58 TraesCS2A01G323500 chr3B 83.186 339 19 6 607 907 713890723 713890385 9.240000e-70 276.0
59 TraesCS2A01G323500 chr3B 83.284 335 19 4 607 904 713787789 713787455 3.320000e-69 274.0
60 TraesCS2A01G323500 chr3B 83.284 335 19 10 607 904 713821743 713821409 3.320000e-69 274.0
61 TraesCS2A01G323500 chr3B 86.081 273 11 9 614 861 129302459 129302729 1.550000e-67 268.0
62 TraesCS2A01G323500 chr3B 88.372 129 6 1 1 129 791769442 791769323 7.560000e-31 147.0
63 TraesCS2A01G323500 chr3B 96.250 80 3 0 3 82 129301902 129301981 2.120000e-26 132.0
64 TraesCS2A01G323500 chr6B 91.304 345 18 5 1 345 684656287 684656619 2.380000e-125 460.0
65 TraesCS2A01G323500 chr6B 100.000 245 0 0 340 584 163959338 163959582 3.980000e-123 453.0
66 TraesCS2A01G323500 chr6B 84.164 341 18 6 607 911 684656661 684657001 1.970000e-76 298.0
67 TraesCS2A01G323500 chr6B 86.029 272 14 6 614 861 95594650 95594921 4.300000e-68 270.0
68 TraesCS2A01G323500 chr6B 100.000 45 0 0 8540 8584 244560548 244560592 6.010000e-12 84.2
69 TraesCS2A01G323500 chr1A 99.602 251 1 0 338 588 580495309 580495059 8.550000e-125 459.0
70 TraesCS2A01G323500 chr1A 92.784 97 6 1 6652 6747 520340198 520340294 1.270000e-28 139.0
71 TraesCS2A01G323500 chr1A 93.478 92 5 1 6650 6740 483658632 483658723 1.640000e-27 135.0
72 TraesCS2A01G323500 chr3A 100.000 246 0 0 341 586 19876362 19876607 1.110000e-123 455.0
73 TraesCS2A01G323500 chr3A 95.203 271 13 0 75 345 452369750 452369480 6.710000e-116 429.0
74 TraesCS2A01G323500 chr3A 87.736 318 14 4 612 904 452369433 452369116 1.930000e-91 348.0
75 TraesCS2A01G323500 chr3A 90.476 105 7 3 6650 6752 562100745 562100848 1.640000e-27 135.0
76 TraesCS2A01G323500 chr1B 99.597 248 0 1 338 585 37633248 37633494 1.430000e-122 451.0
77 TraesCS2A01G323500 chr1B 99.595 247 0 1 339 584 91965432 91965678 5.150000e-122 449.0
78 TraesCS2A01G323500 chr1B 99.200 250 1 1 337 585 668067215 668066966 5.150000e-122 449.0
79 TraesCS2A01G323500 chr5B 99.595 247 0 1 339 584 631480656 631480410 5.150000e-122 449.0
80 TraesCS2A01G323500 chr5B 77.925 453 83 9 5788 6225 172628249 172627799 5.560000e-67 267.0
81 TraesCS2A01G323500 chr5B 93.333 90 5 1 6650 6738 133703281 133703370 2.120000e-26 132.0
82 TraesCS2A01G323500 chr6A 90.462 346 23 2 1 345 569264416 569264752 1.850000e-121 448.0
83 TraesCS2A01G323500 chr6A 83.529 340 19 13 607 909 488735097 488734758 5.520000e-72 283.0
84 TraesCS2A01G323500 chr6A 93.333 90 5 1 6650 6738 603917643 603917732 2.120000e-26 132.0
85 TraesCS2A01G323500 chr5A 98.805 251 2 1 334 584 676603433 676603682 6.660000e-121 446.0
86 TraesCS2A01G323500 chr5A 77.181 447 88 9 5788 6225 165332554 165332113 2.020000e-61 248.0
87 TraesCS2A01G323500 chr5A 92.632 95 5 2 6650 6742 649804753 649804659 1.640000e-27 135.0
88 TraesCS2A01G323500 chr5A 89.320 103 10 1 6650 6751 502601907 502601805 2.740000e-25 128.0
89 TraesCS2A01G323500 chr7A 82.653 392 63 4 8868 9257 136284013 136283625 8.990000e-90 342.0
90 TraesCS2A01G323500 chr7A 96.203 79 2 1 8462 8539 689907182 689907104 2.740000e-25 128.0
91 TraesCS2A01G323500 chr7A 83.607 122 12 7 8467 8582 148478859 148478740 3.570000e-19 108.0
92 TraesCS2A01G323500 chr5D 77.193 456 87 9 5785 6225 175761857 175762310 5.600000e-62 250.0
93 TraesCS2A01G323500 chr3D 96.053 76 3 0 8465 8540 153507693 153507768 3.540000e-24 124.0
94 TraesCS2A01G323500 chr1D 96.000 75 3 0 8464 8538 403236516 403236590 1.270000e-23 122.0
95 TraesCS2A01G323500 chr1D 100.000 44 0 0 8539 8582 472333296 472333339 2.160000e-11 82.4
96 TraesCS2A01G323500 chr7D 100.000 44 0 0 8539 8582 2524357 2524400 2.160000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G323500 chr2A 553483515 553492859 9344 True 17258.000000 17258 100.000000 1 9345 1 chr2A.!!$R2 9344
1 TraesCS2A01G323500 chr2D 433501488 433509897 8409 False 4606.666667 8283 95.873667 958 9345 3 chr2D.!!$F1 8387
2 TraesCS2A01G323500 chr2B 511271608 511279643 8035 False 2906.750000 6013 93.789750 1115 9345 4 chr2B.!!$F3 8230
3 TraesCS2A01G323500 chrUn 176703746 176704457 711 False 357.000000 457 86.701000 1 904 2 chrUn.!!$F2 903
4 TraesCS2A01G323500 chrUn 176737762 176738473 711 False 357.000000 457 86.701000 1 904 2 chrUn.!!$F3 903
5 TraesCS2A01G323500 chrUn 454158926 454159637 711 False 357.000000 457 86.701000 1 904 2 chrUn.!!$F4 903
6 TraesCS2A01G323500 chr4A 487862057 487865379 3322 False 580.500000 693 79.530500 2879 6430 2 chr4A.!!$F2 3551
7 TraesCS2A01G323500 chr4A 486640549 486643216 2667 False 356.250000 584 83.845500 4552 7827 4 chr4A.!!$F1 3275
8 TraesCS2A01G323500 chr4B 132852864 132856353 3489 True 366.400000 595 83.934800 2880 8017 5 chr4B.!!$R3 5137
9 TraesCS2A01G323500 chr4B 132335984 132338509 2525 True 355.000000 484 84.105000 2879 5668 2 chr4B.!!$R2 2789
10 TraesCS2A01G323500 chr4D 94258544 94261233 2689 True 361.000000 590 83.078500 4671 8017 4 chr4D.!!$R4 3346
11 TraesCS2A01G323500 chr4D 115193267 115194181 914 True 260.500000 401 91.306000 1 909 4 chr4D.!!$R5 908
12 TraesCS2A01G323500 chr3B 713821409 713822111 702 True 362.500000 451 87.326500 10 904 2 chr3B.!!$R3 894
13 TraesCS2A01G323500 chr3B 791768710 791769442 732 True 307.333333 429 90.294000 1 904 3 chr3B.!!$R4 903
14 TraesCS2A01G323500 chr3B 129301902 129302729 827 False 287.333333 462 91.211667 1 861 3 chr3B.!!$F1 860
15 TraesCS2A01G323500 chr6B 684656287 684657001 714 False 379.000000 460 87.734000 1 911 2 chr6B.!!$F4 910
16 TraesCS2A01G323500 chr3A 452369116 452369750 634 True 388.500000 429 91.469500 75 904 2 chr3A.!!$R1 829

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
564 940 0.029834 GAAACCGAGGACGCGCTATA 59.970 55.000 5.73 0.00 38.29 1.31 F
565 941 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.000 5.73 0.00 38.29 0.86 F
2272 2738 0.623723 GTGATTAAGGCCCCACTCCA 59.376 55.000 0.00 0.00 0.00 3.86 F
2771 3238 1.767759 ATAGCACCCATCCTTTGCAC 58.232 50.000 0.00 0.00 38.81 4.57 F
3858 4533 1.214589 GGTTGCCAAGCATGCTGAG 59.785 57.895 23.48 16.74 38.76 3.35 F
4664 5394 2.403252 ATGAAGCAGTAAAGACCCCG 57.597 50.000 0.00 0.00 0.00 5.73 F
5620 6660 2.894387 GATCCTGCTGCAGTCGCC 60.894 66.667 26.41 10.22 37.32 5.54 F
6627 7959 2.028203 AGCAACAACAACAACAAAGCCT 60.028 40.909 0.00 0.00 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2267 2733 0.762461 GAGCTGGAGGGCTATGGAGT 60.762 60.000 0.0 0.0 43.20 3.85 R
2351 2818 0.895530 GCATACGCCTAGCCCAGATA 59.104 55.000 0.0 0.0 0.00 1.98 R
3858 4533 5.862924 TGATTAAACTAGCACTTGAGCAC 57.137 39.130 0.0 0.0 36.85 4.40 R
4519 5230 3.157881 TGTTCCATGCCCGATAAAAACA 58.842 40.909 0.0 0.0 0.00 2.83 R
5274 6181 3.756434 TCTTCTTCAATACCCCAAAAGCG 59.244 43.478 0.0 0.0 0.00 4.68 R
6188 7505 0.476771 GGGACCAACCTTCCAACTGA 59.523 55.000 0.0 0.0 38.98 3.41 R
6881 8213 0.174162 GTCATGGCATTCCCTTGTGC 59.826 55.000 0.0 0.0 39.25 4.57 R
8613 9998 0.530744 TCGATAGCTTGGTTGCTCGT 59.469 50.000 0.0 0.0 42.97 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 427 1.520192 CCGACGATGGGGATGTTGA 59.480 57.895 0.00 0.00 0.00 3.18
95 435 2.352561 TGGGGATGTTGAGGAGGTTA 57.647 50.000 0.00 0.00 0.00 2.85
148 524 0.706433 AGGCCAATGGTGTGGAAGAT 59.294 50.000 5.01 0.00 41.65 2.40
157 533 1.676014 GGTGTGGAAGATTGAGACGGG 60.676 57.143 0.00 0.00 0.00 5.28
260 636 1.697432 TCGTGAGAAGGGAACAATGGT 59.303 47.619 0.00 0.00 37.03 3.55
263 639 3.690460 GTGAGAAGGGAACAATGGTGAT 58.310 45.455 0.00 0.00 0.00 3.06
280 656 1.303309 GATGTCATGGCTAGCGCTTT 58.697 50.000 18.68 0.00 36.09 3.51
335 711 1.541147 CTTGGTGATGGCATTGTCGTT 59.459 47.619 0.00 0.00 0.00 3.85
344 720 7.192913 GTGATGGCATTGTCGTTGAAAATATA 58.807 34.615 0.00 0.00 0.00 0.86
345 721 7.165812 GTGATGGCATTGTCGTTGAAAATATAC 59.834 37.037 0.00 0.00 0.00 1.47
346 722 6.751514 TGGCATTGTCGTTGAAAATATACT 57.248 33.333 0.00 0.00 0.00 2.12
347 723 6.781138 TGGCATTGTCGTTGAAAATATACTC 58.219 36.000 0.00 0.00 0.00 2.59
348 724 6.183360 TGGCATTGTCGTTGAAAATATACTCC 60.183 38.462 0.00 0.00 0.00 3.85
349 725 6.199393 GCATTGTCGTTGAAAATATACTCCC 58.801 40.000 0.00 0.00 0.00 4.30
350 726 6.038271 GCATTGTCGTTGAAAATATACTCCCT 59.962 38.462 0.00 0.00 0.00 4.20
351 727 7.630924 CATTGTCGTTGAAAATATACTCCCTC 58.369 38.462 0.00 0.00 0.00 4.30
352 728 5.667466 TGTCGTTGAAAATATACTCCCTCC 58.333 41.667 0.00 0.00 0.00 4.30
353 729 4.743644 GTCGTTGAAAATATACTCCCTCCG 59.256 45.833 0.00 0.00 0.00 4.63
354 730 4.403432 TCGTTGAAAATATACTCCCTCCGT 59.597 41.667 0.00 0.00 0.00 4.69
355 731 5.105228 TCGTTGAAAATATACTCCCTCCGTT 60.105 40.000 0.00 0.00 0.00 4.44
356 732 5.233689 CGTTGAAAATATACTCCCTCCGTTC 59.766 44.000 0.00 0.00 0.00 3.95
357 733 5.286267 TGAAAATATACTCCCTCCGTTCC 57.714 43.478 0.00 0.00 0.00 3.62
358 734 4.717778 TGAAAATATACTCCCTCCGTTCCA 59.282 41.667 0.00 0.00 0.00 3.53
359 735 5.190132 TGAAAATATACTCCCTCCGTTCCAA 59.810 40.000 0.00 0.00 0.00 3.53
360 736 5.703730 AAATATACTCCCTCCGTTCCAAA 57.296 39.130 0.00 0.00 0.00 3.28
361 737 5.703730 AATATACTCCCTCCGTTCCAAAA 57.296 39.130 0.00 0.00 0.00 2.44
362 738 5.906772 ATATACTCCCTCCGTTCCAAAAT 57.093 39.130 0.00 0.00 0.00 1.82
363 739 7.383156 AATATACTCCCTCCGTTCCAAAATA 57.617 36.000 0.00 0.00 0.00 1.40
364 740 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
365 741 8.674925 ATATACTCCCTCCGTTCCAAAATATA 57.325 34.615 0.00 0.00 0.00 0.86
366 742 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
367 743 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
368 744 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
369 745 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
370 746 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
371 747 1.658968 CGTTCCAAAATATAGCGCGC 58.341 50.000 26.66 26.66 0.00 6.86
372 748 1.659211 CGTTCCAAAATATAGCGCGCC 60.659 52.381 30.33 10.31 0.00 6.53
373 749 0.948678 TTCCAAAATATAGCGCGCCC 59.051 50.000 30.33 0.16 0.00 6.13
374 750 0.179043 TCCAAAATATAGCGCGCCCA 60.179 50.000 30.33 17.44 0.00 5.36
375 751 0.040425 CCAAAATATAGCGCGCCCAC 60.040 55.000 30.33 0.00 0.00 4.61
376 752 0.384230 CAAAATATAGCGCGCCCACG 60.384 55.000 30.33 4.40 44.07 4.94
386 762 3.788766 CGCCCACGCTTTTCGAGG 61.789 66.667 0.00 0.00 46.50 4.63
387 763 2.668550 GCCCACGCTTTTCGAGGT 60.669 61.111 0.71 0.00 45.67 3.85
388 764 2.258726 GCCCACGCTTTTCGAGGTT 61.259 57.895 0.71 0.00 45.67 3.50
389 765 1.866925 CCCACGCTTTTCGAGGTTC 59.133 57.895 0.71 0.00 45.67 3.62
390 766 0.882927 CCCACGCTTTTCGAGGTTCA 60.883 55.000 0.71 0.00 45.67 3.18
391 767 0.941542 CCACGCTTTTCGAGGTTCAA 59.058 50.000 0.00 0.00 42.79 2.69
392 768 1.333791 CCACGCTTTTCGAGGTTCAAC 60.334 52.381 0.00 0.00 42.79 3.18
393 769 1.597663 CACGCTTTTCGAGGTTCAACT 59.402 47.619 0.00 0.00 41.67 3.16
394 770 2.031683 CACGCTTTTCGAGGTTCAACTT 59.968 45.455 0.00 0.00 41.67 2.66
395 771 2.681344 ACGCTTTTCGAGGTTCAACTTT 59.319 40.909 0.00 0.00 41.67 2.66
396 772 3.035942 CGCTTTTCGAGGTTCAACTTTG 58.964 45.455 0.00 0.00 41.67 2.77
397 773 3.242608 CGCTTTTCGAGGTTCAACTTTGA 60.243 43.478 0.00 0.00 41.67 2.69
398 774 4.035684 GCTTTTCGAGGTTCAACTTTGAC 58.964 43.478 0.00 0.00 36.83 3.18
399 775 4.598062 CTTTTCGAGGTTCAACTTTGACC 58.402 43.478 0.00 0.00 36.83 4.02
400 776 2.992124 TCGAGGTTCAACTTTGACCA 57.008 45.000 11.01 0.00 36.83 4.02
401 777 3.485463 TCGAGGTTCAACTTTGACCAT 57.515 42.857 11.01 0.00 36.83 3.55
402 778 4.610605 TCGAGGTTCAACTTTGACCATA 57.389 40.909 11.01 0.00 36.83 2.74
403 779 4.963373 TCGAGGTTCAACTTTGACCATAA 58.037 39.130 11.01 0.00 36.83 1.90
404 780 5.369833 TCGAGGTTCAACTTTGACCATAAA 58.630 37.500 11.01 0.00 36.83 1.40
405 781 6.001460 TCGAGGTTCAACTTTGACCATAAAT 58.999 36.000 11.01 0.00 36.83 1.40
406 782 6.488683 TCGAGGTTCAACTTTGACCATAAATT 59.511 34.615 11.01 0.00 36.83 1.82
407 783 7.013846 TCGAGGTTCAACTTTGACCATAAATTT 59.986 33.333 0.00 0.00 36.83 1.82
408 784 8.293867 CGAGGTTCAACTTTGACCATAAATTTA 58.706 33.333 0.00 0.00 36.83 1.40
409 785 9.974980 GAGGTTCAACTTTGACCATAAATTTAA 57.025 29.630 1.21 0.00 36.83 1.52
410 786 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
411 787 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
412 788 8.984764 GTTCAACTTTGACCATAAATTTAACCC 58.015 33.333 1.21 0.00 36.83 4.11
413 789 8.251383 TCAACTTTGACCATAAATTTAACCCA 57.749 30.769 1.21 0.00 31.01 4.51
414 790 8.145122 TCAACTTTGACCATAAATTTAACCCAC 58.855 33.333 1.21 0.00 31.01 4.61
415 791 6.683715 ACTTTGACCATAAATTTAACCCACG 58.316 36.000 1.21 0.00 0.00 4.94
416 792 6.490721 ACTTTGACCATAAATTTAACCCACGA 59.509 34.615 1.21 0.00 0.00 4.35
417 793 6.503589 TTGACCATAAATTTAACCCACGAG 57.496 37.500 1.21 0.00 0.00 4.18
418 794 5.806818 TGACCATAAATTTAACCCACGAGA 58.193 37.500 1.21 0.00 0.00 4.04
419 795 5.644636 TGACCATAAATTTAACCCACGAGAC 59.355 40.000 1.21 0.00 0.00 3.36
420 796 4.945543 ACCATAAATTTAACCCACGAGACC 59.054 41.667 1.21 0.00 0.00 3.85
421 797 4.034742 CCATAAATTTAACCCACGAGACCG 59.965 45.833 1.21 0.00 42.50 4.79
422 798 3.405823 AAATTTAACCCACGAGACCGA 57.594 42.857 0.00 0.00 39.50 4.69
423 799 2.375173 ATTTAACCCACGAGACCGAC 57.625 50.000 0.00 0.00 39.50 4.79
424 800 1.331214 TTTAACCCACGAGACCGACT 58.669 50.000 0.00 0.00 39.50 4.18
425 801 0.599558 TTAACCCACGAGACCGACTG 59.400 55.000 0.00 0.00 39.50 3.51
426 802 1.870055 TAACCCACGAGACCGACTGC 61.870 60.000 0.00 0.00 39.50 4.40
427 803 4.778415 CCCACGAGACCGACTGCG 62.778 72.222 0.00 0.00 39.50 5.18
437 813 4.812476 CGACTGCGGCGGGATCAA 62.812 66.667 14.26 0.00 0.00 2.57
438 814 2.435938 GACTGCGGCGGGATCAAA 60.436 61.111 14.26 0.00 0.00 2.69
439 815 2.033448 ACTGCGGCGGGATCAAAA 59.967 55.556 14.26 0.00 0.00 2.44
440 816 1.582610 GACTGCGGCGGGATCAAAAA 61.583 55.000 14.26 0.00 0.00 1.94
441 817 0.965363 ACTGCGGCGGGATCAAAAAT 60.965 50.000 14.26 0.00 0.00 1.82
442 818 0.173255 CTGCGGCGGGATCAAAAATT 59.827 50.000 9.78 0.00 0.00 1.82
443 819 1.403679 CTGCGGCGGGATCAAAAATTA 59.596 47.619 9.78 0.00 0.00 1.40
444 820 2.028130 TGCGGCGGGATCAAAAATTAT 58.972 42.857 9.78 0.00 0.00 1.28
445 821 3.215151 TGCGGCGGGATCAAAAATTATA 58.785 40.909 9.78 0.00 0.00 0.98
446 822 3.823873 TGCGGCGGGATCAAAAATTATAT 59.176 39.130 9.78 0.00 0.00 0.86
447 823 5.004448 TGCGGCGGGATCAAAAATTATATA 58.996 37.500 9.78 0.00 0.00 0.86
448 824 5.473846 TGCGGCGGGATCAAAAATTATATAA 59.526 36.000 9.78 0.00 0.00 0.98
449 825 6.151985 TGCGGCGGGATCAAAAATTATATAAT 59.848 34.615 9.78 1.91 0.00 1.28
450 826 7.033185 GCGGCGGGATCAAAAATTATATAATT 58.967 34.615 13.85 13.85 37.49 1.40
451 827 8.185505 GCGGCGGGATCAAAAATTATATAATTA 58.814 33.333 18.75 6.09 35.00 1.40
516 892 4.336581 CGCAGTCGGTCTTGTTGA 57.663 55.556 0.00 0.00 0.00 3.18
517 893 2.827604 CGCAGTCGGTCTTGTTGAT 58.172 52.632 0.00 0.00 0.00 2.57
518 894 1.148310 CGCAGTCGGTCTTGTTGATT 58.852 50.000 0.00 0.00 0.00 2.57
519 895 2.333926 CGCAGTCGGTCTTGTTGATTA 58.666 47.619 0.00 0.00 0.00 1.75
520 896 2.734606 CGCAGTCGGTCTTGTTGATTAA 59.265 45.455 0.00 0.00 0.00 1.40
521 897 3.185594 CGCAGTCGGTCTTGTTGATTAAA 59.814 43.478 0.00 0.00 0.00 1.52
522 898 4.142902 CGCAGTCGGTCTTGTTGATTAAAT 60.143 41.667 0.00 0.00 0.00 1.40
523 899 5.616866 CGCAGTCGGTCTTGTTGATTAAATT 60.617 40.000 0.00 0.00 0.00 1.82
524 900 6.401688 CGCAGTCGGTCTTGTTGATTAAATTA 60.402 38.462 0.00 0.00 0.00 1.40
525 901 7.302524 GCAGTCGGTCTTGTTGATTAAATTAA 58.697 34.615 0.00 0.00 0.00 1.40
526 902 7.968405 GCAGTCGGTCTTGTTGATTAAATTAAT 59.032 33.333 0.00 0.00 0.00 1.40
527 903 9.277565 CAGTCGGTCTTGTTGATTAAATTAATG 57.722 33.333 2.58 0.00 0.00 1.90
528 904 8.458843 AGTCGGTCTTGTTGATTAAATTAATGG 58.541 33.333 2.58 0.00 0.00 3.16
529 905 8.241367 GTCGGTCTTGTTGATTAAATTAATGGT 58.759 33.333 2.58 0.00 0.00 3.55
530 906 8.455682 TCGGTCTTGTTGATTAAATTAATGGTC 58.544 33.333 2.58 0.00 0.00 4.02
531 907 8.240682 CGGTCTTGTTGATTAAATTAATGGTCA 58.759 33.333 2.58 0.00 0.00 4.02
532 908 9.921637 GGTCTTGTTGATTAAATTAATGGTCAA 57.078 29.630 2.58 0.04 0.00 3.18
542 918 9.995003 ATTAAATTAATGGTCAAAGTTGAAGCA 57.005 25.926 0.00 0.00 39.21 3.91
543 919 7.713764 AAATTAATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
544 920 3.354089 AATGGTCAAAGTTGAAGCACG 57.646 42.857 0.00 0.00 39.21 5.34
545 921 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
546 922 1.305201 GGTCAAAGTTGAAGCACGGA 58.695 50.000 0.00 0.00 39.21 4.69
547 923 1.673920 GGTCAAAGTTGAAGCACGGAA 59.326 47.619 0.00 0.00 39.21 4.30
548 924 2.098443 GGTCAAAGTTGAAGCACGGAAA 59.902 45.455 0.00 0.00 39.21 3.13
549 925 3.105937 GTCAAAGTTGAAGCACGGAAAC 58.894 45.455 0.00 0.00 39.21 2.78
550 926 2.098443 TCAAAGTTGAAGCACGGAAACC 59.902 45.455 0.00 0.00 33.55 3.27
551 927 5.321388 TCAAAGTTGAAGCACGGAAACCG 62.321 47.826 8.67 8.67 43.00 4.44
561 937 4.736896 GGAAACCGAGGACGCGCT 62.737 66.667 5.73 0.00 38.29 5.92
562 938 2.180017 GAAACCGAGGACGCGCTA 59.820 61.111 5.73 0.00 38.29 4.26
563 939 1.226888 GAAACCGAGGACGCGCTAT 60.227 57.895 5.73 0.00 38.29 2.97
564 940 0.029834 GAAACCGAGGACGCGCTATA 59.970 55.000 5.73 0.00 38.29 1.31
565 941 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.000 5.73 0.00 38.29 0.86
566 942 0.672342 AACCGAGGACGCGCTATATT 59.328 50.000 5.73 0.00 38.29 1.28
567 943 0.672342 ACCGAGGACGCGCTATATTT 59.328 50.000 5.73 0.00 38.29 1.40
568 944 1.068127 ACCGAGGACGCGCTATATTTT 59.932 47.619 5.73 0.00 38.29 1.82
569 945 1.455786 CCGAGGACGCGCTATATTTTG 59.544 52.381 5.73 0.00 38.29 2.44
570 946 1.455786 CGAGGACGCGCTATATTTTGG 59.544 52.381 5.73 0.00 0.00 3.28
571 947 2.750948 GAGGACGCGCTATATTTTGGA 58.249 47.619 5.73 0.00 0.00 3.53
572 948 3.128349 GAGGACGCGCTATATTTTGGAA 58.872 45.455 5.73 0.00 0.00 3.53
573 949 2.870411 AGGACGCGCTATATTTTGGAAC 59.130 45.455 5.73 0.00 0.00 3.62
574 950 2.348218 GGACGCGCTATATTTTGGAACG 60.348 50.000 5.73 0.00 0.00 3.95
575 951 1.595794 ACGCGCTATATTTTGGAACGG 59.404 47.619 5.73 0.00 0.00 4.44
576 952 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
577 953 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
578 954 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
579 955 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
580 956 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
581 957 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
582 958 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
609 1004 3.764434 AGCTCTGTGATTTCGACTTCCTA 59.236 43.478 0.00 0.00 0.00 2.94
646 1041 3.461946 CGAAGCATGAAGTTGAAGGAC 57.538 47.619 0.00 0.00 0.00 3.85
658 1053 5.160607 AGTTGAAGGACATCCGAACAATA 57.839 39.130 11.01 0.00 42.08 1.90
726 1132 1.419381 TGCGCCTACCCTATCAATGA 58.581 50.000 4.18 0.00 0.00 2.57
781 1202 9.017509 ACTATCCATGCATTATAATGGTTGAAG 57.982 33.333 23.57 9.78 43.31 3.02
851 1272 7.690454 TTCCATCCTCAAGAAGTTATCCATA 57.310 36.000 0.00 0.00 0.00 2.74
878 1312 6.985117 ACTTAATGTTCAACTGCATTGTCAT 58.015 32.000 8.19 10.25 39.54 3.06
914 1348 4.889241 CGGGCACGTTTACTAGTAATTTG 58.111 43.478 15.92 13.33 34.81 2.32
915 1349 4.389687 CGGGCACGTTTACTAGTAATTTGT 59.610 41.667 15.92 11.53 34.81 2.83
916 1350 5.576384 CGGGCACGTTTACTAGTAATTTGTA 59.424 40.000 15.92 0.00 34.81 2.41
917 1351 6.090628 CGGGCACGTTTACTAGTAATTTGTAA 59.909 38.462 15.92 0.00 34.81 2.41
918 1352 7.359933 CGGGCACGTTTACTAGTAATTTGTAAA 60.360 37.037 15.92 0.00 35.56 2.01
919 1353 8.288913 GGGCACGTTTACTAGTAATTTGTAAAA 58.711 33.333 15.92 0.00 38.23 1.52
920 1354 9.662545 GGCACGTTTACTAGTAATTTGTAAAAA 57.337 29.630 15.92 0.00 38.23 1.94
943 1377 9.952030 AAAAGAATTTAAAAAGTTGACCCTTCA 57.048 25.926 0.00 0.00 37.28 3.02
944 1378 9.952030 AAAGAATTTAAAAAGTTGACCCTTCAA 57.048 25.926 0.00 0.00 35.86 2.69
946 1380 9.546428 AGAATTTAAAAAGTTGACCCTTCAATG 57.454 29.630 0.00 0.00 43.72 2.82
947 1381 9.325198 GAATTTAAAAAGTTGACCCTTCAATGT 57.675 29.630 0.00 0.00 43.72 2.71
949 1383 9.758651 ATTTAAAAAGTTGACCCTTCAATGTAC 57.241 29.630 0.00 0.00 43.72 2.90
950 1384 6.783708 AAAAAGTTGACCCTTCAATGTACA 57.216 33.333 0.00 0.00 43.72 2.90
951 1385 6.391227 AAAAGTTGACCCTTCAATGTACAG 57.609 37.500 0.33 0.00 43.72 2.74
952 1386 4.974645 AGTTGACCCTTCAATGTACAGA 57.025 40.909 0.33 0.00 43.72 3.41
953 1387 5.304686 AGTTGACCCTTCAATGTACAGAA 57.695 39.130 0.33 0.00 43.72 3.02
954 1388 5.308825 AGTTGACCCTTCAATGTACAGAAG 58.691 41.667 14.85 14.85 43.72 2.85
955 1389 4.974645 TGACCCTTCAATGTACAGAAGT 57.025 40.909 18.44 6.74 39.61 3.01
956 1390 6.042781 AGTTGACCCTTCAATGTACAGAAGTA 59.957 38.462 18.44 4.98 43.72 2.24
1032 1467 5.335127 GTCGCTTATCGTTCTTAACTACCA 58.665 41.667 0.00 0.00 39.67 3.25
1079 1514 1.344087 ACACCTCCCGTAATCCCATCT 60.344 52.381 0.00 0.00 0.00 2.90
1616 2056 7.242740 AGGGAATAAGATTAGGCCATTAGGATT 59.757 37.037 5.01 0.00 36.89 3.01
1617 2057 7.340487 GGGAATAAGATTAGGCCATTAGGATTG 59.660 40.741 5.01 0.00 36.89 2.67
1730 2193 0.801451 TGCAGCTTTGCGTTGTGTTG 60.801 50.000 0.00 0.00 37.69 3.33
1875 2338 8.632679 TCAAATTTTGCTCTTGTATTGAGTTCT 58.367 29.630 4.19 0.00 34.30 3.01
1886 2349 9.208022 TCTTGTATTGAGTTCTAACATTCAGTG 57.792 33.333 0.00 0.00 0.00 3.66
1898 2361 7.892609 TCTAACATTCAGTGAAGCTACTAACA 58.107 34.615 11.91 0.00 0.00 2.41
1900 2363 6.787085 ACATTCAGTGAAGCTACTAACAAC 57.213 37.500 11.91 0.00 0.00 3.32
1902 2365 6.992715 ACATTCAGTGAAGCTACTAACAACTT 59.007 34.615 11.91 0.00 0.00 2.66
2107 2572 4.900635 AATCTGAACCGTGATTATTGCC 57.099 40.909 0.00 0.00 31.91 4.52
2167 2633 8.430801 TTGTGTTGCAGTATTTATTGCTTTTT 57.569 26.923 6.63 0.00 39.36 1.94
2272 2738 0.623723 GTGATTAAGGCCCCACTCCA 59.376 55.000 0.00 0.00 0.00 3.86
2351 2818 4.833478 ACTCTGTGAGCTGAATTGGTAT 57.167 40.909 0.00 0.00 32.04 2.73
2768 3235 8.862325 TGTTATTATATAGCACCCATCCTTTG 57.138 34.615 0.00 0.00 0.00 2.77
2769 3236 7.393234 TGTTATTATATAGCACCCATCCTTTGC 59.607 37.037 0.00 0.00 36.45 3.68
2770 3237 3.882102 ATATAGCACCCATCCTTTGCA 57.118 42.857 0.00 0.00 38.81 4.08
2771 3238 1.767759 ATAGCACCCATCCTTTGCAC 58.232 50.000 0.00 0.00 38.81 4.57
2807 3275 2.315925 TTGATGCCTTTAGCTCCTCG 57.684 50.000 0.00 0.00 44.23 4.63
3459 3941 6.445357 TTTCAAAACCTGAGGAAAGTACAC 57.555 37.500 4.99 0.00 34.81 2.90
3858 4533 1.214589 GGTTGCCAAGCATGCTGAG 59.785 57.895 23.48 16.74 38.76 3.35
4172 4876 5.198965 AGCTCTCAATTATCAAGCCATGTT 58.801 37.500 0.00 0.00 33.43 2.71
4191 4895 7.318141 CCATGTTTAATTTGTTCAGCTGAGAT 58.682 34.615 17.43 7.27 0.00 2.75
4356 5062 9.802039 ACATATTGTTACTCAGTTTTTCCCTTA 57.198 29.630 0.00 0.00 0.00 2.69
4507 5218 9.676195 CAGTGTTATGTTCATTGATTTGTTACA 57.324 29.630 0.00 0.00 0.00 2.41
4519 5230 6.909550 TGATTTGTTACATTTAGCCCACTT 57.090 33.333 0.00 0.00 0.00 3.16
4536 5247 3.510719 CACTTGTTTTTATCGGGCATGG 58.489 45.455 0.00 0.00 0.00 3.66
4664 5394 2.403252 ATGAAGCAGTAAAGACCCCG 57.597 50.000 0.00 0.00 0.00 5.73
4715 5449 6.263617 TCTTGGGTTGGTTGATAGTTGTTTAC 59.736 38.462 0.00 0.00 0.00 2.01
5095 6001 4.651503 AGACATGCAGGCTAACACTATAGT 59.348 41.667 0.00 0.00 29.36 2.12
5274 6181 6.708285 TCCAACCTCTTGTTAAGAATCCTAC 58.292 40.000 0.00 0.00 37.02 3.18
5474 6510 4.305989 ACTTCATGTTGCAAATTGTCGT 57.694 36.364 0.00 1.45 0.00 4.34
5475 6511 4.290155 ACTTCATGTTGCAAATTGTCGTC 58.710 39.130 0.00 0.00 0.00 4.20
5620 6660 2.894387 GATCCTGCTGCAGTCGCC 60.894 66.667 26.41 10.22 37.32 5.54
5659 6700 7.899973 AGGTGAGATTATTTTTGTGAGCATTT 58.100 30.769 0.00 0.00 0.00 2.32
6092 7409 5.511888 GCAATTTAAGCCCCATCATATTGCT 60.512 40.000 0.00 0.00 41.84 3.91
6370 7698 7.712639 TCATCACCATCTTAATCTTAGTTCAGC 59.287 37.037 0.00 0.00 0.00 4.26
6447 7779 3.617775 GCACAGAGTACTCCCTCCTTTTC 60.618 52.174 19.38 0.00 31.53 2.29
6454 7786 7.713073 CAGAGTACTCCCTCCTTTTCATAATTC 59.287 40.741 19.38 0.00 31.53 2.17
6541 7873 2.356075 GCAAGCCAATGCACGCAA 60.356 55.556 0.00 0.00 45.70 4.85
6608 7940 9.986833 AATCAAACATAAAAAGAAAACAACAGC 57.013 25.926 0.00 0.00 0.00 4.40
6609 7941 8.539770 TCAAACATAAAAAGAAAACAACAGCA 57.460 26.923 0.00 0.00 0.00 4.41
6611 7943 9.049974 CAAACATAAAAAGAAAACAACAGCAAC 57.950 29.630 0.00 0.00 0.00 4.17
6614 7946 8.227119 ACATAAAAAGAAAACAACAGCAACAAC 58.773 29.630 0.00 0.00 0.00 3.32
6615 7947 6.610741 AAAAAGAAAACAACAGCAACAACA 57.389 29.167 0.00 0.00 0.00 3.33
6617 7949 5.590104 AAGAAAACAACAGCAACAACAAC 57.410 34.783 0.00 0.00 0.00 3.32
6620 7952 4.723879 AAACAACAGCAACAACAACAAC 57.276 36.364 0.00 0.00 0.00 3.32
6622 7954 3.722147 ACAACAGCAACAACAACAACAA 58.278 36.364 0.00 0.00 0.00 2.83
6623 7955 4.122776 ACAACAGCAACAACAACAACAAA 58.877 34.783 0.00 0.00 0.00 2.83
6624 7956 4.210955 ACAACAGCAACAACAACAACAAAG 59.789 37.500 0.00 0.00 0.00 2.77
6625 7957 2.736192 ACAGCAACAACAACAACAAAGC 59.264 40.909 0.00 0.00 0.00 3.51
6626 7958 2.094099 CAGCAACAACAACAACAAAGCC 59.906 45.455 0.00 0.00 0.00 4.35
6627 7959 2.028203 AGCAACAACAACAACAAAGCCT 60.028 40.909 0.00 0.00 0.00 4.58
6628 7960 2.741517 GCAACAACAACAACAAAGCCTT 59.258 40.909 0.00 0.00 0.00 4.35
6629 7961 3.929610 GCAACAACAACAACAAAGCCTTA 59.070 39.130 0.00 0.00 0.00 2.69
6630 7962 4.032786 GCAACAACAACAACAAAGCCTTAG 59.967 41.667 0.00 0.00 0.00 2.18
6631 7963 5.406649 CAACAACAACAACAAAGCCTTAGA 58.593 37.500 0.00 0.00 0.00 2.10
6632 7964 5.852282 ACAACAACAACAAAGCCTTAGAT 57.148 34.783 0.00 0.00 0.00 1.98
6633 7965 5.591099 ACAACAACAACAAAGCCTTAGATG 58.409 37.500 0.00 0.00 0.00 2.90
6634 7966 5.127031 ACAACAACAACAAAGCCTTAGATGT 59.873 36.000 0.00 0.00 0.00 3.06
6635 7967 5.186996 ACAACAACAAAGCCTTAGATGTG 57.813 39.130 0.00 0.00 0.00 3.21
6636 7968 3.923017 ACAACAAAGCCTTAGATGTGC 57.077 42.857 0.00 0.00 0.00 4.57
6637 7969 3.221771 ACAACAAAGCCTTAGATGTGCA 58.778 40.909 0.00 0.00 0.00 4.57
6638 7970 3.636300 ACAACAAAGCCTTAGATGTGCAA 59.364 39.130 0.00 0.00 0.00 4.08
6639 7971 4.281688 ACAACAAAGCCTTAGATGTGCAAT 59.718 37.500 0.00 0.00 0.00 3.56
6640 7972 5.476599 ACAACAAAGCCTTAGATGTGCAATA 59.523 36.000 0.00 0.00 0.00 1.90
6641 7973 5.567138 ACAAAGCCTTAGATGTGCAATAC 57.433 39.130 0.00 0.00 0.00 1.89
6642 7974 5.256474 ACAAAGCCTTAGATGTGCAATACT 58.744 37.500 0.00 0.00 0.00 2.12
6643 7975 5.711976 ACAAAGCCTTAGATGTGCAATACTT 59.288 36.000 0.00 0.00 0.00 2.24
6644 7976 6.884295 ACAAAGCCTTAGATGTGCAATACTTA 59.116 34.615 0.00 0.00 0.00 2.24
6645 7977 6.927294 AAGCCTTAGATGTGCAATACTTAC 57.073 37.500 0.00 0.00 0.00 2.34
6646 7978 5.989477 AGCCTTAGATGTGCAATACTTACA 58.011 37.500 0.00 0.00 0.00 2.41
6647 7979 5.817816 AGCCTTAGATGTGCAATACTTACAC 59.182 40.000 0.00 0.00 34.86 2.90
6648 7980 5.276868 GCCTTAGATGTGCAATACTTACACG 60.277 44.000 0.00 0.00 37.11 4.49
6649 7981 5.810587 CCTTAGATGTGCAATACTTACACGT 59.189 40.000 0.00 0.00 37.11 4.49
6650 7982 6.976349 CCTTAGATGTGCAATACTTACACGTA 59.024 38.462 0.00 0.00 37.11 3.57
6651 7983 7.652105 CCTTAGATGTGCAATACTTACACGTAT 59.348 37.037 0.00 0.00 37.11 3.06
6679 8011 4.445718 CGAATCTCCACGTAAGATCAATGG 59.554 45.833 11.76 0.00 43.62 3.16
6709 8041 6.992715 GGACTTAGATGTGCAATACTTATGGT 59.007 38.462 0.00 0.00 0.00 3.55
6753 8085 9.056005 GGCAAAACTGATATACATATCACAAGA 57.944 33.333 7.66 0.00 42.96 3.02
6770 8102 4.701651 CACAAGAGGTTCCATGAGCAAATA 59.298 41.667 0.00 0.00 0.00 1.40
6794 8126 5.659525 ACATTAAGCCTAATAAACAACCCCC 59.340 40.000 0.00 0.00 0.00 5.40
6878 8210 6.294342 CGGAGTATTATTGTTCTGGGATACGA 60.294 42.308 0.00 0.00 37.60 3.43
6881 8213 8.833231 AGTATTATTGTTCTGGGATACGAATG 57.167 34.615 0.00 0.00 37.60 2.67
6902 8234 1.203052 CACAAGGGAATGCCATGACAC 59.797 52.381 2.40 0.00 35.15 3.67
6946 8278 8.472007 TTGTATTTGGTAGCCTTATTTATGGG 57.528 34.615 0.00 0.00 0.00 4.00
7010 8342 1.911057 ACTTTTCTGGTAGCCCTTGC 58.089 50.000 0.00 0.00 37.95 4.01
7106 8444 0.396001 CATGTGGATGGCATGTGGGA 60.396 55.000 3.81 0.00 38.96 4.37
7134 8474 1.270518 CCACACTAAGCAGCAGACTGT 60.271 52.381 3.99 0.00 46.30 3.55
7428 8783 2.553602 CTGCAAGTGTGGTTAATCAGCA 59.446 45.455 0.00 0.00 0.00 4.41
7442 8809 2.502142 TCAGCATGCTCCTGTGAAAT 57.498 45.000 19.68 0.00 34.76 2.17
7507 8874 3.075005 AGCGTACCAGGCCGTCAT 61.075 61.111 0.00 0.00 0.00 3.06
8216 9601 1.444119 TTCGGCAGCAGTTTGGTGTC 61.444 55.000 9.64 6.47 46.67 3.67
8343 9728 6.968250 TGGATTTGAAACAAATTTGATTGGC 58.032 32.000 24.64 8.74 34.56 4.52
8408 9793 2.031157 GTGTGCCATTGGTACTGTCAAC 60.031 50.000 22.23 9.87 39.07 3.18
8450 9835 5.094134 GTGAGAAGCGAGTAATAAACGAGT 58.906 41.667 0.00 0.00 0.00 4.18
8451 9836 6.128200 TGTGAGAAGCGAGTAATAAACGAGTA 60.128 38.462 0.00 0.00 0.00 2.59
8455 9840 5.314923 AGCGAGTAATAAACGAGTAACCA 57.685 39.130 0.00 0.00 0.00 3.67
8457 9842 6.335777 AGCGAGTAATAAACGAGTAACCATT 58.664 36.000 0.00 0.00 0.00 3.16
8458 9843 6.474751 AGCGAGTAATAAACGAGTAACCATTC 59.525 38.462 0.00 0.00 0.00 2.67
8459 9844 6.292008 GCGAGTAATAAACGAGTAACCATTCC 60.292 42.308 0.00 0.00 0.00 3.01
8460 9845 6.075205 CGAGTAATAAACGAGTAACCATTCCG 60.075 42.308 0.00 0.00 0.00 4.30
8461 9846 4.870221 AATAAACGAGTAACCATTCCGC 57.130 40.909 0.00 0.00 0.00 5.54
8462 9847 2.172851 AAACGAGTAACCATTCCGCA 57.827 45.000 0.00 0.00 0.00 5.69
8463 9848 2.172851 AACGAGTAACCATTCCGCAA 57.827 45.000 0.00 0.00 0.00 4.85
8467 9852 3.504520 ACGAGTAACCATTCCGCAAAAAT 59.495 39.130 0.00 0.00 0.00 1.82
8468 9853 4.696402 ACGAGTAACCATTCCGCAAAAATA 59.304 37.500 0.00 0.00 0.00 1.40
8469 9854 5.355910 ACGAGTAACCATTCCGCAAAAATAT 59.644 36.000 0.00 0.00 0.00 1.28
8472 9857 7.254658 CGAGTAACCATTCCGCAAAAATATACT 60.255 37.037 0.00 0.00 0.00 2.12
8473 9858 7.927048 AGTAACCATTCCGCAAAAATATACTC 58.073 34.615 0.00 0.00 0.00 2.59
8475 9860 4.583073 ACCATTCCGCAAAAATATACTCCC 59.417 41.667 0.00 0.00 0.00 4.30
8476 9861 4.827284 CCATTCCGCAAAAATATACTCCCT 59.173 41.667 0.00 0.00 0.00 4.20
8478 9863 5.367945 TTCCGCAAAAATATACTCCCTCT 57.632 39.130 0.00 0.00 0.00 3.69
8479 9864 4.703897 TCCGCAAAAATATACTCCCTCTG 58.296 43.478 0.00 0.00 0.00 3.35
8480 9865 4.163458 TCCGCAAAAATATACTCCCTCTGT 59.837 41.667 0.00 0.00 0.00 3.41
8481 9866 4.881850 CCGCAAAAATATACTCCCTCTGTT 59.118 41.667 0.00 0.00 0.00 3.16
8482 9867 5.357032 CCGCAAAAATATACTCCCTCTGTTT 59.643 40.000 0.00 0.00 0.00 2.83
8483 9868 6.458342 CCGCAAAAATATACTCCCTCTGTTTC 60.458 42.308 0.00 0.00 0.00 2.78
8484 9869 6.093495 CGCAAAAATATACTCCCTCTGTTTCA 59.907 38.462 0.00 0.00 0.00 2.69
8485 9870 7.361713 CGCAAAAATATACTCCCTCTGTTTCAA 60.362 37.037 0.00 0.00 0.00 2.69
8486 9871 8.303876 GCAAAAATATACTCCCTCTGTTTCAAA 58.696 33.333 0.00 0.00 0.00 2.69
8493 9878 8.970859 ATACTCCCTCTGTTTCAAAATAGATG 57.029 34.615 2.91 1.27 35.92 2.90
8494 9879 7.020827 ACTCCCTCTGTTTCAAAATAGATGA 57.979 36.000 2.91 3.20 35.92 2.92
8495 9880 6.881602 ACTCCCTCTGTTTCAAAATAGATGAC 59.118 38.462 2.91 0.00 35.92 3.06
8497 9882 5.358160 CCCTCTGTTTCAAAATAGATGACCC 59.642 44.000 2.91 0.00 35.92 4.46
8498 9883 5.945784 CCTCTGTTTCAAAATAGATGACCCA 59.054 40.000 2.91 0.00 35.92 4.51
8499 9884 6.434028 CCTCTGTTTCAAAATAGATGACCCAA 59.566 38.462 2.91 0.00 35.92 4.12
8500 9885 7.214467 TCTGTTTCAAAATAGATGACCCAAC 57.786 36.000 0.00 0.00 32.24 3.77
8501 9886 7.004086 TCTGTTTCAAAATAGATGACCCAACT 58.996 34.615 0.00 0.00 32.24 3.16
8502 9887 7.505585 TCTGTTTCAAAATAGATGACCCAACTT 59.494 33.333 0.00 0.00 32.24 2.66
8503 9888 8.017418 TGTTTCAAAATAGATGACCCAACTTT 57.983 30.769 0.00 0.00 0.00 2.66
8504 9889 7.925483 TGTTTCAAAATAGATGACCCAACTTTG 59.075 33.333 0.00 0.00 0.00 2.77
8505 9890 7.595819 TTCAAAATAGATGACCCAACTTTGT 57.404 32.000 0.00 0.00 0.00 2.83
8506 9891 8.698973 TTCAAAATAGATGACCCAACTTTGTA 57.301 30.769 0.00 0.00 0.00 2.41
8507 9892 8.106247 TCAAAATAGATGACCCAACTTTGTAC 57.894 34.615 0.00 0.00 0.00 2.90
8508 9893 7.942341 TCAAAATAGATGACCCAACTTTGTACT 59.058 33.333 0.00 0.00 0.00 2.73
8509 9894 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
8511 9896 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
8512 9897 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
8513 9898 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
8515 9900 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
8517 9902 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
8518 9903 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
8550 9935 9.778741 TTGAGTCATCTATTTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
8602 9987 8.959705 ATTTTAGTATTTTAGAACGGAGGGAG 57.040 34.615 0.00 0.00 0.00 4.30
8603 9988 7.486407 TTTAGTATTTTAGAACGGAGGGAGT 57.514 36.000 0.00 0.00 0.00 3.85
8604 9989 8.593945 TTTAGTATTTTAGAACGGAGGGAGTA 57.406 34.615 0.00 0.00 0.00 2.59
8605 9990 8.593945 TTAGTATTTTAGAACGGAGGGAGTAA 57.406 34.615 0.00 0.00 0.00 2.24
8606 9991 7.486407 AGTATTTTAGAACGGAGGGAGTAAA 57.514 36.000 0.00 0.00 0.00 2.01
8607 9992 7.910584 AGTATTTTAGAACGGAGGGAGTAAAA 58.089 34.615 0.00 0.00 0.00 1.52
8608 9993 8.377799 AGTATTTTAGAACGGAGGGAGTAAAAA 58.622 33.333 0.00 0.00 0.00 1.94
8609 9994 9.170734 GTATTTTAGAACGGAGGGAGTAAAAAT 57.829 33.333 0.00 0.00 0.00 1.82
8610 9995 8.645814 ATTTTAGAACGGAGGGAGTAAAAATT 57.354 30.769 0.00 0.00 0.00 1.82
8611 9996 9.743581 ATTTTAGAACGGAGGGAGTAAAAATTA 57.256 29.630 0.00 0.00 0.00 1.40
8612 9997 9.571816 TTTTAGAACGGAGGGAGTAAAAATTAA 57.428 29.630 0.00 0.00 0.00 1.40
8613 9998 9.571816 TTTAGAACGGAGGGAGTAAAAATTAAA 57.428 29.630 0.00 0.00 0.00 1.52
8614 9999 7.444629 AGAACGGAGGGAGTAAAAATTAAAC 57.555 36.000 0.00 0.00 0.00 2.01
8615 10000 5.868043 ACGGAGGGAGTAAAAATTAAACG 57.132 39.130 0.00 0.00 0.00 3.60
8616 10001 5.550290 ACGGAGGGAGTAAAAATTAAACGA 58.450 37.500 0.00 0.00 0.00 3.85
8617 10002 5.640783 ACGGAGGGAGTAAAAATTAAACGAG 59.359 40.000 0.00 0.00 0.00 4.18
8618 10003 5.446875 CGGAGGGAGTAAAAATTAAACGAGC 60.447 44.000 0.00 0.00 0.00 5.03
8624 10009 6.919115 GGAGTAAAAATTAAACGAGCAACCAA 59.081 34.615 0.00 0.00 0.00 3.67
8630 10015 4.939509 TTAAACGAGCAACCAAGCTATC 57.060 40.909 0.00 0.00 46.75 2.08
8652 10037 6.301687 TCGATTTGTTTCGGTACATTTTCA 57.698 33.333 0.00 0.00 39.56 2.69
8659 10044 8.563289 TTGTTTCGGTACATTTTCATAACAAC 57.437 30.769 0.00 0.00 30.64 3.32
8669 10054 3.394674 TTCATAACAACTCGACAGCCA 57.605 42.857 0.00 0.00 0.00 4.75
8670 10055 3.610040 TCATAACAACTCGACAGCCAT 57.390 42.857 0.00 0.00 0.00 4.40
8767 10152 1.153489 TCTCCGTACTACGAGCGCT 60.153 57.895 11.27 11.27 46.05 5.92
8903 10304 2.809601 GCCGTCACGAGCACGAAT 60.810 61.111 11.40 0.00 42.66 3.34
9092 10493 2.737376 GACACCAGGAACGTCGCC 60.737 66.667 0.00 0.00 0.00 5.54
9301 10702 4.106925 GACCAGCTCCAGGGCCAG 62.107 72.222 6.18 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 427 2.998910 TCCCCGGTATAGATAACCTCCT 59.001 50.000 0.00 0.00 34.66 3.69
95 435 2.188817 GCCATCTTCCCCGGTATAGAT 58.811 52.381 0.00 1.98 0.00 1.98
148 524 1.195115 CTTCCTCCATCCCGTCTCAA 58.805 55.000 0.00 0.00 0.00 3.02
157 533 0.809385 TGTCGTCGACTTCCTCCATC 59.191 55.000 24.75 0.00 33.15 3.51
260 636 0.178767 AAGCGCTAGCCATGACATCA 59.821 50.000 12.05 0.00 46.67 3.07
263 639 0.036483 TCAAAGCGCTAGCCATGACA 60.036 50.000 12.05 0.00 46.67 3.58
280 656 0.462225 TTGCGAAACGAACCTGGTCA 60.462 50.000 0.00 0.00 0.00 4.02
335 711 4.717778 TGGAACGGAGGGAGTATATTTTCA 59.282 41.667 0.00 0.00 0.00 2.69
344 720 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
345 721 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
346 722 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
347 723 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
348 724 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
349 725 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
350 726 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
351 727 1.659211 GCGCGCTATATTTTGGAACGG 60.659 52.381 26.67 0.00 0.00 4.44
352 728 1.658968 GCGCGCTATATTTTGGAACG 58.341 50.000 26.67 0.00 0.00 3.95
353 729 1.334689 GGGCGCGCTATATTTTGGAAC 60.335 52.381 32.29 8.93 0.00 3.62
354 730 0.948678 GGGCGCGCTATATTTTGGAA 59.051 50.000 32.29 0.00 0.00 3.53
355 731 0.179043 TGGGCGCGCTATATTTTGGA 60.179 50.000 32.29 0.00 0.00 3.53
356 732 0.040425 GTGGGCGCGCTATATTTTGG 60.040 55.000 32.29 0.00 0.00 3.28
357 733 0.384230 CGTGGGCGCGCTATATTTTG 60.384 55.000 32.29 9.06 0.00 2.44
358 734 1.938861 CGTGGGCGCGCTATATTTT 59.061 52.632 32.29 0.00 0.00 1.82
359 735 3.637714 CGTGGGCGCGCTATATTT 58.362 55.556 32.29 0.00 0.00 1.40
369 745 3.788766 CCTCGAAAAGCGTGGGCG 61.789 66.667 0.00 0.00 46.89 6.13
373 749 1.597663 AGTTGAACCTCGAAAAGCGTG 59.402 47.619 0.00 0.00 41.80 5.34
374 750 1.949465 AGTTGAACCTCGAAAAGCGT 58.051 45.000 0.00 0.00 41.80 5.07
375 751 3.035942 CAAAGTTGAACCTCGAAAAGCG 58.964 45.455 0.00 0.00 42.69 4.68
376 752 4.035684 GTCAAAGTTGAACCTCGAAAAGC 58.964 43.478 0.00 0.00 39.21 3.51
377 753 4.095782 TGGTCAAAGTTGAACCTCGAAAAG 59.904 41.667 6.62 0.00 44.20 2.27
378 754 4.011023 TGGTCAAAGTTGAACCTCGAAAA 58.989 39.130 6.62 0.00 44.20 2.29
379 755 3.611970 TGGTCAAAGTTGAACCTCGAAA 58.388 40.909 6.62 0.00 44.20 3.46
380 756 3.269538 TGGTCAAAGTTGAACCTCGAA 57.730 42.857 6.62 0.00 44.20 3.71
381 757 2.992124 TGGTCAAAGTTGAACCTCGA 57.008 45.000 6.62 0.00 44.20 4.04
382 758 5.682943 TTTATGGTCAAAGTTGAACCTCG 57.317 39.130 6.62 0.00 44.20 4.63
383 759 9.974980 TTAAATTTATGGTCAAAGTTGAACCTC 57.025 29.630 6.62 0.00 44.20 3.85
384 760 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
385 761 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
386 762 8.984764 GGGTTAAATTTATGGTCAAAGTTGAAC 58.015 33.333 1.98 1.98 45.04 3.18
387 763 8.705594 TGGGTTAAATTTATGGTCAAAGTTGAA 58.294 29.630 0.00 0.00 39.21 2.69
388 764 8.145122 GTGGGTTAAATTTATGGTCAAAGTTGA 58.855 33.333 0.00 0.00 34.20 3.18
389 765 7.115663 CGTGGGTTAAATTTATGGTCAAAGTTG 59.884 37.037 0.00 0.00 29.44 3.16
390 766 7.014422 TCGTGGGTTAAATTTATGGTCAAAGTT 59.986 33.333 0.00 0.00 31.36 2.66
391 767 6.490721 TCGTGGGTTAAATTTATGGTCAAAGT 59.509 34.615 0.00 0.00 0.00 2.66
392 768 6.915349 TCGTGGGTTAAATTTATGGTCAAAG 58.085 36.000 0.00 0.00 0.00 2.77
393 769 6.715718 TCTCGTGGGTTAAATTTATGGTCAAA 59.284 34.615 0.00 0.00 0.00 2.69
394 770 6.149807 GTCTCGTGGGTTAAATTTATGGTCAA 59.850 38.462 0.00 0.00 0.00 3.18
395 771 5.644636 GTCTCGTGGGTTAAATTTATGGTCA 59.355 40.000 0.00 0.00 0.00 4.02
396 772 5.065602 GGTCTCGTGGGTTAAATTTATGGTC 59.934 44.000 0.00 0.00 0.00 4.02
397 773 4.945543 GGTCTCGTGGGTTAAATTTATGGT 59.054 41.667 0.00 0.00 0.00 3.55
398 774 4.034742 CGGTCTCGTGGGTTAAATTTATGG 59.965 45.833 0.00 0.00 0.00 2.74
399 775 4.871557 TCGGTCTCGTGGGTTAAATTTATG 59.128 41.667 0.00 0.00 37.69 1.90
400 776 4.872124 GTCGGTCTCGTGGGTTAAATTTAT 59.128 41.667 0.00 0.00 37.69 1.40
401 777 4.021192 AGTCGGTCTCGTGGGTTAAATTTA 60.021 41.667 0.00 0.00 37.69 1.40
402 778 3.069289 GTCGGTCTCGTGGGTTAAATTT 58.931 45.455 0.00 0.00 37.69 1.82
403 779 2.301009 AGTCGGTCTCGTGGGTTAAATT 59.699 45.455 0.00 0.00 37.69 1.82
404 780 1.897802 AGTCGGTCTCGTGGGTTAAAT 59.102 47.619 0.00 0.00 37.69 1.40
405 781 1.000060 CAGTCGGTCTCGTGGGTTAAA 60.000 52.381 0.00 0.00 37.69 1.52
406 782 0.599558 CAGTCGGTCTCGTGGGTTAA 59.400 55.000 0.00 0.00 37.69 2.01
407 783 1.870055 GCAGTCGGTCTCGTGGGTTA 61.870 60.000 0.00 0.00 37.69 2.85
408 784 3.048602 CAGTCGGTCTCGTGGGTT 58.951 61.111 0.00 0.00 37.69 4.11
409 785 3.681835 GCAGTCGGTCTCGTGGGT 61.682 66.667 0.00 0.00 37.69 4.51
410 786 4.778415 CGCAGTCGGTCTCGTGGG 62.778 72.222 0.00 0.00 37.69 4.61
420 796 4.812476 TTGATCCCGCCGCAGTCG 62.812 66.667 0.00 0.00 0.00 4.18
421 797 1.582610 TTTTTGATCCCGCCGCAGTC 61.583 55.000 0.00 0.00 0.00 3.51
422 798 0.965363 ATTTTTGATCCCGCCGCAGT 60.965 50.000 0.00 0.00 0.00 4.40
423 799 0.173255 AATTTTTGATCCCGCCGCAG 59.827 50.000 0.00 0.00 0.00 5.18
424 800 1.464734 TAATTTTTGATCCCGCCGCA 58.535 45.000 0.00 0.00 0.00 5.69
425 801 2.793278 ATAATTTTTGATCCCGCCGC 57.207 45.000 0.00 0.00 0.00 6.53
499 875 1.148310 AATCAACAAGACCGACTGCG 58.852 50.000 0.00 0.00 37.24 5.18
500 876 4.742438 TTTAATCAACAAGACCGACTGC 57.258 40.909 0.00 0.00 0.00 4.40
501 877 9.277565 CATTAATTTAATCAACAAGACCGACTG 57.722 33.333 0.00 0.00 0.00 3.51
502 878 8.458843 CCATTAATTTAATCAACAAGACCGACT 58.541 33.333 0.00 0.00 0.00 4.18
503 879 8.241367 ACCATTAATTTAATCAACAAGACCGAC 58.759 33.333 0.00 0.00 0.00 4.79
504 880 8.343168 ACCATTAATTTAATCAACAAGACCGA 57.657 30.769 0.00 0.00 0.00 4.69
505 881 8.240682 TGACCATTAATTTAATCAACAAGACCG 58.759 33.333 0.00 0.00 0.00 4.79
506 882 9.921637 TTGACCATTAATTTAATCAACAAGACC 57.078 29.630 0.00 0.00 0.00 3.85
516 892 9.995003 TGCTTCAACTTTGACCATTAATTTAAT 57.005 25.926 0.00 0.00 36.83 1.40
517 893 9.255304 GTGCTTCAACTTTGACCATTAATTTAA 57.745 29.630 0.00 0.00 36.83 1.52
518 894 7.593273 CGTGCTTCAACTTTGACCATTAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
519 895 6.420604 CGTGCTTCAACTTTGACCATTAATTT 59.579 34.615 0.00 0.00 36.83 1.82
520 896 5.920273 CGTGCTTCAACTTTGACCATTAATT 59.080 36.000 0.00 0.00 36.83 1.40
521 897 5.460646 CGTGCTTCAACTTTGACCATTAAT 58.539 37.500 0.00 0.00 36.83 1.40
522 898 4.261405 CCGTGCTTCAACTTTGACCATTAA 60.261 41.667 0.00 0.00 36.83 1.40
523 899 3.252215 CCGTGCTTCAACTTTGACCATTA 59.748 43.478 0.00 0.00 36.83 1.90
524 900 2.034558 CCGTGCTTCAACTTTGACCATT 59.965 45.455 0.00 0.00 36.83 3.16
525 901 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
526 902 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
527 903 1.305201 TCCGTGCTTCAACTTTGACC 58.695 50.000 0.00 0.00 36.83 4.02
528 904 3.105937 GTTTCCGTGCTTCAACTTTGAC 58.894 45.455 0.00 0.00 36.83 3.18
529 905 2.098443 GGTTTCCGTGCTTCAACTTTGA 59.902 45.455 0.00 0.00 34.92 2.69
530 906 2.459934 GGTTTCCGTGCTTCAACTTTG 58.540 47.619 0.00 0.00 0.00 2.77
531 907 1.064952 CGGTTTCCGTGCTTCAACTTT 59.935 47.619 0.00 0.00 42.73 2.66
532 908 0.661020 CGGTTTCCGTGCTTCAACTT 59.339 50.000 0.00 0.00 42.73 2.66
533 909 2.317230 CGGTTTCCGTGCTTCAACT 58.683 52.632 0.00 0.00 42.73 3.16
534 910 4.914291 CGGTTTCCGTGCTTCAAC 57.086 55.556 0.00 0.00 42.73 3.18
544 920 2.624437 ATAGCGCGTCCTCGGTTTCC 62.624 60.000 8.43 0.00 40.82 3.13
545 921 0.029834 TATAGCGCGTCCTCGGTTTC 59.970 55.000 8.43 0.00 40.82 2.78
546 922 0.672342 ATATAGCGCGTCCTCGGTTT 59.328 50.000 8.43 0.00 40.82 3.27
547 923 0.672342 AATATAGCGCGTCCTCGGTT 59.328 50.000 8.43 0.00 40.82 4.44
548 924 0.672342 AAATATAGCGCGTCCTCGGT 59.328 50.000 8.43 0.00 43.07 4.69
549 925 1.455786 CAAAATATAGCGCGTCCTCGG 59.544 52.381 8.43 0.00 37.56 4.63
550 926 1.455786 CCAAAATATAGCGCGTCCTCG 59.544 52.381 8.43 0.00 40.37 4.63
551 927 2.750948 TCCAAAATATAGCGCGTCCTC 58.249 47.619 8.43 0.00 0.00 3.71
552 928 2.870411 GTTCCAAAATATAGCGCGTCCT 59.130 45.455 8.43 0.00 0.00 3.85
553 929 2.348218 CGTTCCAAAATATAGCGCGTCC 60.348 50.000 8.43 0.00 0.00 4.79
554 930 2.348218 CCGTTCCAAAATATAGCGCGTC 60.348 50.000 8.43 0.00 0.00 5.19
555 931 1.595794 CCGTTCCAAAATATAGCGCGT 59.404 47.619 8.43 0.00 0.00 6.01
556 932 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
557 933 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
558 934 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
559 935 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
560 936 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
561 937 7.383156 AATACTCCCTCCGTTCCAAAATATA 57.617 36.000 0.00 0.00 0.00 0.86
562 938 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
563 939 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
564 940 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
565 941 5.493809 CTTAATACTCCCTCCGTTCCAAAA 58.506 41.667 0.00 0.00 0.00 2.44
566 942 4.624604 GCTTAATACTCCCTCCGTTCCAAA 60.625 45.833 0.00 0.00 0.00 3.28
567 943 3.118519 GCTTAATACTCCCTCCGTTCCAA 60.119 47.826 0.00 0.00 0.00 3.53
568 944 2.433239 GCTTAATACTCCCTCCGTTCCA 59.567 50.000 0.00 0.00 0.00 3.53
569 945 2.699321 AGCTTAATACTCCCTCCGTTCC 59.301 50.000 0.00 0.00 0.00 3.62
570 946 3.637694 AGAGCTTAATACTCCCTCCGTTC 59.362 47.826 0.00 0.00 34.56 3.95
571 947 3.385111 CAGAGCTTAATACTCCCTCCGTT 59.615 47.826 0.00 0.00 34.56 4.44
572 948 2.959707 CAGAGCTTAATACTCCCTCCGT 59.040 50.000 0.00 0.00 34.56 4.69
573 949 2.959707 ACAGAGCTTAATACTCCCTCCG 59.040 50.000 0.00 0.00 34.56 4.63
574 950 3.961408 TCACAGAGCTTAATACTCCCTCC 59.039 47.826 0.00 0.00 34.56 4.30
575 951 5.799827 ATCACAGAGCTTAATACTCCCTC 57.200 43.478 0.00 0.00 34.56 4.30
576 952 6.567602 AAATCACAGAGCTTAATACTCCCT 57.432 37.500 0.00 0.00 34.56 4.20
577 953 5.463724 CGAAATCACAGAGCTTAATACTCCC 59.536 44.000 0.00 0.00 34.56 4.30
578 954 6.199342 GTCGAAATCACAGAGCTTAATACTCC 59.801 42.308 0.00 0.00 34.56 3.85
579 955 6.975772 AGTCGAAATCACAGAGCTTAATACTC 59.024 38.462 0.00 0.00 0.00 2.59
580 956 6.868622 AGTCGAAATCACAGAGCTTAATACT 58.131 36.000 0.00 0.00 0.00 2.12
581 957 7.254151 GGAAGTCGAAATCACAGAGCTTAATAC 60.254 40.741 0.00 0.00 0.00 1.89
582 958 6.757010 GGAAGTCGAAATCACAGAGCTTAATA 59.243 38.462 0.00 0.00 0.00 0.98
626 1021 2.807967 TGTCCTTCAACTTCATGCTTCG 59.192 45.455 0.00 0.00 0.00 3.79
635 1030 3.485463 TGTTCGGATGTCCTTCAACTT 57.515 42.857 0.00 0.00 0.00 2.66
658 1053 7.556635 GGTATGGAGCAGATTTTTAGTTTAGGT 59.443 37.037 0.00 0.00 0.00 3.08
726 1132 9.426837 CATGAGGTGACACAAAAATTATTCAAT 57.573 29.630 8.08 0.00 33.61 2.57
739 1159 5.208121 TGGATAGTATCATGAGGTGACACA 58.792 41.667 12.19 0.00 36.70 3.72
851 1272 8.575589 TGACAATGCAGTTGAACATTAAGTTAT 58.424 29.630 13.53 0.00 41.51 1.89
917 1351 9.952030 TGAAGGGTCAACTTTTTAAATTCTTTT 57.048 25.926 0.00 0.00 0.00 2.27
918 1352 9.952030 TTGAAGGGTCAACTTTTTAAATTCTTT 57.048 25.926 0.00 0.00 38.88 2.52
920 1354 9.546428 CATTGAAGGGTCAACTTTTTAAATTCT 57.454 29.630 0.00 0.00 46.40 2.40
921 1355 9.325198 ACATTGAAGGGTCAACTTTTTAAATTC 57.675 29.630 0.00 0.00 46.40 2.17
923 1357 9.758651 GTACATTGAAGGGTCAACTTTTTAAAT 57.241 29.630 0.00 0.00 46.40 1.40
924 1358 8.750298 TGTACATTGAAGGGTCAACTTTTTAAA 58.250 29.630 0.00 0.00 46.40 1.52
925 1359 8.294954 TGTACATTGAAGGGTCAACTTTTTAA 57.705 30.769 0.00 0.00 46.40 1.52
926 1360 7.776030 TCTGTACATTGAAGGGTCAACTTTTTA 59.224 33.333 0.00 0.00 46.40 1.52
927 1361 6.605594 TCTGTACATTGAAGGGTCAACTTTTT 59.394 34.615 0.00 0.00 46.40 1.94
928 1362 6.126409 TCTGTACATTGAAGGGTCAACTTTT 58.874 36.000 0.00 0.00 46.40 2.27
929 1363 5.690865 TCTGTACATTGAAGGGTCAACTTT 58.309 37.500 0.00 0.00 46.40 2.66
930 1364 5.304686 TCTGTACATTGAAGGGTCAACTT 57.695 39.130 0.00 0.00 46.40 2.66
931 1365 4.974645 TCTGTACATTGAAGGGTCAACT 57.025 40.909 0.00 0.00 46.40 3.16
932 1366 5.063880 ACTTCTGTACATTGAAGGGTCAAC 58.936 41.667 22.07 0.00 46.40 3.18
934 1368 4.974645 ACTTCTGTACATTGAAGGGTCA 57.025 40.909 22.07 0.00 42.67 4.02
935 1369 8.008513 TCTATACTTCTGTACATTGAAGGGTC 57.991 38.462 22.07 0.00 42.67 4.46
936 1370 7.973048 TCTATACTTCTGTACATTGAAGGGT 57.027 36.000 22.07 14.88 42.67 4.34
937 1371 9.265901 CAATCTATACTTCTGTACATTGAAGGG 57.734 37.037 22.07 12.66 42.67 3.95
938 1372 9.265901 CCAATCTATACTTCTGTACATTGAAGG 57.734 37.037 22.07 9.70 42.67 3.46
1079 1514 2.682494 CGGGGAAACGAGGGGAGA 60.682 66.667 0.00 0.00 35.47 3.71
1400 1835 4.556104 CGGCAGATTTCAGGCATTTATCAG 60.556 45.833 0.00 0.00 0.00 2.90
1616 2056 1.822371 TGGTTTCGATCTGATCCGACA 59.178 47.619 11.84 3.74 34.26 4.35
1617 2057 2.099263 TCTGGTTTCGATCTGATCCGAC 59.901 50.000 11.84 7.83 34.26 4.79
1721 2184 6.855914 ACACAATTATCTAAAGCAACACAACG 59.144 34.615 0.00 0.00 0.00 4.10
1875 2338 8.148351 AGTTGTTAGTAGCTTCACTGAATGTTA 58.852 33.333 0.00 0.00 0.00 2.41
1886 2349 5.674933 AAGCACAAGTTGTTAGTAGCTTC 57.325 39.130 19.38 0.00 36.44 3.86
1898 2361 2.484264 GCTACCGATCAAAGCACAAGTT 59.516 45.455 6.16 0.00 36.26 2.66
1900 2363 2.094894 CAGCTACCGATCAAAGCACAAG 59.905 50.000 12.04 0.00 38.75 3.16
1902 2365 1.675714 CCAGCTACCGATCAAAGCACA 60.676 52.381 12.04 0.00 38.75 4.57
2064 2529 8.396390 AGATTTTTCTGATGATCATGAAAGTCG 58.604 33.333 14.30 0.00 30.91 4.18
2066 2531 9.239551 TCAGATTTTTCTGATGATCATGAAAGT 57.760 29.630 14.30 9.80 41.34 2.66
2099 2564 5.410439 ACGAGACGTAACAAAAGGCAATAAT 59.590 36.000 0.00 0.00 38.73 1.28
2107 2572 5.077424 GCCAAATACGAGACGTAACAAAAG 58.923 41.667 8.01 0.00 45.39 2.27
2240 2706 5.365314 GGCCTTAATCACCCCATAAATCAAA 59.635 40.000 0.00 0.00 0.00 2.69
2267 2733 0.762461 GAGCTGGAGGGCTATGGAGT 60.762 60.000 0.00 0.00 43.20 3.85
2272 2738 1.004758 TTGGGAGCTGGAGGGCTAT 59.995 57.895 0.00 0.00 43.20 2.97
2351 2818 0.895530 GCATACGCCTAGCCCAGATA 59.104 55.000 0.00 0.00 0.00 1.98
2489 2956 2.034878 TCGCTATGTGCAAGAGGAGAT 58.965 47.619 0.00 0.00 43.06 2.75
2618 3085 6.312918 GGTTTCTTAATTACAGCGATGAGTCA 59.687 38.462 8.12 0.00 0.00 3.41
2763 3230 5.763204 ACTATATTCCCAATACGTGCAAAGG 59.237 40.000 0.00 0.00 0.00 3.11
2768 3235 6.854496 TCAAACTATATTCCCAATACGTGC 57.146 37.500 0.00 0.00 0.00 5.34
2769 3236 7.298122 GCATCAAACTATATTCCCAATACGTG 58.702 38.462 0.00 0.00 0.00 4.49
2770 3237 6.430000 GGCATCAAACTATATTCCCAATACGT 59.570 38.462 0.00 0.00 0.00 3.57
2771 3238 6.655003 AGGCATCAAACTATATTCCCAATACG 59.345 38.462 0.00 0.00 0.00 3.06
3422 3904 9.148879 TCAGGTTTTGAAAATAAAATGAGGGTA 57.851 29.630 0.00 0.00 32.71 3.69
3459 3941 7.463648 GCAATCATTTATGCTTTAAGTGTGCAG 60.464 37.037 0.00 0.00 40.18 4.41
3510 3993 9.698309 GTTATAGAACATAGTCATGCACAGTAT 57.302 33.333 0.00 0.00 35.39 2.12
3858 4533 5.862924 TGATTAAACTAGCACTTGAGCAC 57.137 39.130 0.00 0.00 36.85 4.40
4172 4876 8.742777 AGCAAATATCTCAGCTGAACAAATTAA 58.257 29.630 18.85 0.00 35.72 1.40
4449 5159 6.879458 GGGCCAATATGTTACGAATTCTCTAT 59.121 38.462 4.39 0.00 0.00 1.98
4507 5218 5.105513 CCCGATAAAAACAAGTGGGCTAAAT 60.106 40.000 0.00 0.00 0.00 1.40
4519 5230 3.157881 TGTTCCATGCCCGATAAAAACA 58.842 40.909 0.00 0.00 0.00 2.83
4605 5328 3.963129 TGTTCTAAGGGCACATAAAGGG 58.037 45.455 0.00 0.00 0.00 3.95
4664 5394 6.324819 AGCACAATTCATGCAGTAATACAAC 58.675 36.000 12.56 0.00 45.92 3.32
5202 6108 5.135383 TCTAATGCAAATGGATCAAGGGAG 58.865 41.667 0.00 0.00 0.00 4.30
5274 6181 3.756434 TCTTCTTCAATACCCCAAAAGCG 59.244 43.478 0.00 0.00 0.00 4.68
5620 6660 3.861840 TCTCACCTTCTGCTTAATTCGG 58.138 45.455 0.00 0.00 0.00 4.30
5686 6734 4.067972 TGTTGTGAGGGAGAACAAGTAC 57.932 45.455 0.00 0.00 34.99 2.73
6188 7505 0.476771 GGGACCAACCTTCCAACTGA 59.523 55.000 0.00 0.00 38.98 3.41
6370 7698 5.745227 ACCAACCTAGTTCCAGTATCATTG 58.255 41.667 0.00 0.00 0.00 2.82
6447 7779 4.871993 AGACAAGCTTGCTCGAATTATG 57.128 40.909 26.27 0.00 0.00 1.90
6454 7786 4.474226 AAAACTAAGACAAGCTTGCTCG 57.526 40.909 26.27 18.09 37.42 5.03
6485 7817 2.594529 ACGCGCTGTAATGTGAAAAG 57.405 45.000 5.73 0.00 0.00 2.27
6602 7934 4.700332 CTTTGTTGTTGTTGTTGCTGTTG 58.300 39.130 0.00 0.00 0.00 3.33
6605 7937 2.094099 GGCTTTGTTGTTGTTGTTGCTG 59.906 45.455 0.00 0.00 0.00 4.41
6607 7939 2.345876 AGGCTTTGTTGTTGTTGTTGC 58.654 42.857 0.00 0.00 0.00 4.17
6608 7940 5.406649 TCTAAGGCTTTGTTGTTGTTGTTG 58.593 37.500 4.45 0.00 0.00 3.33
6609 7941 5.652994 TCTAAGGCTTTGTTGTTGTTGTT 57.347 34.783 4.45 0.00 0.00 2.83
6611 7943 5.459762 CACATCTAAGGCTTTGTTGTTGTTG 59.540 40.000 18.44 7.73 0.00 3.33
6614 7946 3.983344 GCACATCTAAGGCTTTGTTGTTG 59.017 43.478 18.44 15.21 0.00 3.33
6615 7947 3.636300 TGCACATCTAAGGCTTTGTTGTT 59.364 39.130 18.44 6.06 0.00 2.83
6617 7949 3.921119 TGCACATCTAAGGCTTTGTTG 57.079 42.857 4.45 11.47 0.00 3.33
6620 7952 5.824904 AGTATTGCACATCTAAGGCTTTG 57.175 39.130 4.45 3.09 0.00 2.77
6622 7954 6.414732 TGTAAGTATTGCACATCTAAGGCTT 58.585 36.000 4.58 4.58 35.19 4.35
6623 7955 5.989477 TGTAAGTATTGCACATCTAAGGCT 58.011 37.500 0.00 0.00 35.19 4.58
6648 7980 3.146618 ACGTGGAGATTCGTGTGATAC 57.853 47.619 0.00 0.00 38.85 2.24
6649 7981 4.637091 TCTTACGTGGAGATTCGTGTGATA 59.363 41.667 0.00 0.00 40.50 2.15
6650 7982 3.442625 TCTTACGTGGAGATTCGTGTGAT 59.557 43.478 0.00 0.00 40.50 3.06
6651 7983 2.815503 TCTTACGTGGAGATTCGTGTGA 59.184 45.455 0.00 0.00 40.50 3.58
6679 8011 6.998802 AGTATTGCACATCTAAGTCCTATCC 58.001 40.000 0.00 0.00 0.00 2.59
6727 8059 9.056005 TCTTGTGATATGTATATCAGTTTTGCC 57.944 33.333 13.38 3.21 46.94 4.52
6753 8085 6.183360 GCTTAATGTATTTGCTCATGGAACCT 60.183 38.462 0.00 0.00 0.00 3.50
6770 8102 5.659525 GGGGGTTGTTTATTAGGCTTAATGT 59.340 40.000 11.12 0.00 31.97 2.71
6794 8126 3.118738 ACTCGCATACCAAGGAGTTAAGG 60.119 47.826 0.00 0.00 36.39 2.69
6878 8210 1.208535 CATGGCATTCCCTTGTGCATT 59.791 47.619 0.00 0.00 43.00 3.56
6881 8213 0.174162 GTCATGGCATTCCCTTGTGC 59.826 55.000 0.00 0.00 39.25 4.57
6902 8234 8.948853 AATACAAGTTCATAACAATGTGTTCG 57.051 30.769 0.00 0.00 40.22 3.95
6946 8278 6.144078 ACACCAACAAAAATACCTCAAGTC 57.856 37.500 0.00 0.00 0.00 3.01
7106 8444 0.766674 TGCTTAGTGTGGTCCCAGGT 60.767 55.000 0.00 0.00 0.00 4.00
7134 8474 6.286758 TGCAAAATCACCAAGCTGAAAAATA 58.713 32.000 0.00 0.00 0.00 1.40
7428 8783 2.842496 TCCTCAGATTTCACAGGAGCAT 59.158 45.455 0.00 0.00 31.10 3.79
7442 8809 2.364842 GGCAGGAGGCTCCTCAGA 60.365 66.667 33.04 0.00 45.66 3.27
8023 9396 2.509336 CGTCACCGCTGATCACCC 60.509 66.667 0.00 0.00 0.00 4.61
8216 9601 2.544069 GCCTCTTTCCTATCGTTCCTCG 60.544 54.545 0.00 0.00 41.41 4.63
8343 9728 2.751259 ACAGCACCAGCATAGAAATGTG 59.249 45.455 0.00 0.00 45.49 3.21
8408 9793 2.160219 CACACCAATGAACTGACGATGG 59.840 50.000 0.00 0.00 0.00 3.51
8450 9835 6.263617 GGGAGTATATTTTTGCGGAATGGTTA 59.736 38.462 0.00 0.00 0.00 2.85
8451 9836 5.068591 GGGAGTATATTTTTGCGGAATGGTT 59.931 40.000 0.00 0.00 0.00 3.67
8455 9840 5.765182 CAGAGGGAGTATATTTTTGCGGAAT 59.235 40.000 0.00 0.00 0.00 3.01
8457 9842 4.163458 ACAGAGGGAGTATATTTTTGCGGA 59.837 41.667 0.00 0.00 0.00 5.54
8458 9843 4.451900 ACAGAGGGAGTATATTTTTGCGG 58.548 43.478 0.00 0.00 0.00 5.69
8459 9844 6.093495 TGAAACAGAGGGAGTATATTTTTGCG 59.907 38.462 0.00 0.00 0.00 4.85
8460 9845 7.391148 TGAAACAGAGGGAGTATATTTTTGC 57.609 36.000 0.00 0.00 0.00 3.68
8468 9853 8.772250 TCATCTATTTTGAAACAGAGGGAGTAT 58.228 33.333 0.00 0.00 0.00 2.12
8469 9854 8.041323 GTCATCTATTTTGAAACAGAGGGAGTA 58.959 37.037 0.00 0.00 0.00 2.59
8472 9857 6.180472 GGTCATCTATTTTGAAACAGAGGGA 58.820 40.000 0.00 0.00 0.00 4.20
8473 9858 5.358160 GGGTCATCTATTTTGAAACAGAGGG 59.642 44.000 0.00 0.00 0.00 4.30
8475 9860 7.175641 AGTTGGGTCATCTATTTTGAAACAGAG 59.824 37.037 0.00 0.00 0.00 3.35
8476 9861 7.004086 AGTTGGGTCATCTATTTTGAAACAGA 58.996 34.615 0.00 0.00 0.00 3.41
8478 9863 7.595819 AAGTTGGGTCATCTATTTTGAAACA 57.404 32.000 0.00 0.00 0.00 2.83
8479 9864 7.926018 ACAAAGTTGGGTCATCTATTTTGAAAC 59.074 33.333 0.00 0.00 0.00 2.78
8480 9865 8.017418 ACAAAGTTGGGTCATCTATTTTGAAA 57.983 30.769 0.00 0.00 0.00 2.69
8481 9866 7.595819 ACAAAGTTGGGTCATCTATTTTGAA 57.404 32.000 0.00 0.00 0.00 2.69
8482 9867 7.942341 AGTACAAAGTTGGGTCATCTATTTTGA 59.058 33.333 0.00 0.00 0.00 2.69
8483 9868 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
8484 9869 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
8485 9870 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
8486 9871 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
8487 9872 8.603304 ACTTTAGTACAAAGTTGGGTCATCTAT 58.397 33.333 14.04 0.00 37.18 1.98
8488 9873 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
8491 9876 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
8524 9909 9.778741 AGTACAAAGTTGAAATAGATGACTCAA 57.221 29.630 0.00 0.00 0.00 3.02
8577 9962 8.546322 ACTCCCTCCGTTCTAAAATACTAAAAT 58.454 33.333 0.00 0.00 0.00 1.82
8578 9963 7.910584 ACTCCCTCCGTTCTAAAATACTAAAA 58.089 34.615 0.00 0.00 0.00 1.52
8579 9964 7.486407 ACTCCCTCCGTTCTAAAATACTAAA 57.514 36.000 0.00 0.00 0.00 1.85
8580 9965 8.593945 TTACTCCCTCCGTTCTAAAATACTAA 57.406 34.615 0.00 0.00 0.00 2.24
8581 9966 8.593945 TTTACTCCCTCCGTTCTAAAATACTA 57.406 34.615 0.00 0.00 0.00 1.82
8582 9967 7.486407 TTTACTCCCTCCGTTCTAAAATACT 57.514 36.000 0.00 0.00 0.00 2.12
8583 9968 8.552083 TTTTTACTCCCTCCGTTCTAAAATAC 57.448 34.615 0.00 0.00 0.00 1.89
8584 9969 9.743581 AATTTTTACTCCCTCCGTTCTAAAATA 57.256 29.630 0.00 0.00 0.00 1.40
8585 9970 8.645814 AATTTTTACTCCCTCCGTTCTAAAAT 57.354 30.769 0.00 0.00 0.00 1.82
8586 9971 9.571816 TTAATTTTTACTCCCTCCGTTCTAAAA 57.428 29.630 0.00 0.00 0.00 1.52
8587 9972 9.571816 TTTAATTTTTACTCCCTCCGTTCTAAA 57.428 29.630 0.00 0.00 0.00 1.85
8588 9973 9.002600 GTTTAATTTTTACTCCCTCCGTTCTAA 57.997 33.333 0.00 0.00 0.00 2.10
8589 9974 7.331687 CGTTTAATTTTTACTCCCTCCGTTCTA 59.668 37.037 0.00 0.00 0.00 2.10
8590 9975 6.148315 CGTTTAATTTTTACTCCCTCCGTTCT 59.852 38.462 0.00 0.00 0.00 3.01
8591 9976 6.147656 TCGTTTAATTTTTACTCCCTCCGTTC 59.852 38.462 0.00 0.00 0.00 3.95
8592 9977 5.997129 TCGTTTAATTTTTACTCCCTCCGTT 59.003 36.000 0.00 0.00 0.00 4.44
8593 9978 5.550290 TCGTTTAATTTTTACTCCCTCCGT 58.450 37.500 0.00 0.00 0.00 4.69
8594 9979 5.446875 GCTCGTTTAATTTTTACTCCCTCCG 60.447 44.000 0.00 0.00 0.00 4.63
8595 9980 5.413523 TGCTCGTTTAATTTTTACTCCCTCC 59.586 40.000 0.00 0.00 0.00 4.30
8596 9981 6.490566 TGCTCGTTTAATTTTTACTCCCTC 57.509 37.500 0.00 0.00 0.00 4.30
8597 9982 6.294342 GGTTGCTCGTTTAATTTTTACTCCCT 60.294 38.462 0.00 0.00 0.00 4.20
8598 9983 5.860182 GGTTGCTCGTTTAATTTTTACTCCC 59.140 40.000 0.00 0.00 0.00 4.30
8599 9984 6.440436 TGGTTGCTCGTTTAATTTTTACTCC 58.560 36.000 0.00 0.00 0.00 3.85
8600 9985 7.358105 GCTTGGTTGCTCGTTTAATTTTTACTC 60.358 37.037 0.00 0.00 0.00 2.59
8601 9986 6.419710 GCTTGGTTGCTCGTTTAATTTTTACT 59.580 34.615 0.00 0.00 0.00 2.24
8602 9987 6.419710 AGCTTGGTTGCTCGTTTAATTTTTAC 59.580 34.615 0.00 0.00 39.34 2.01
8603 9988 6.508777 AGCTTGGTTGCTCGTTTAATTTTTA 58.491 32.000 0.00 0.00 39.34 1.52
8604 9989 5.356426 AGCTTGGTTGCTCGTTTAATTTTT 58.644 33.333 0.00 0.00 39.34 1.94
8605 9990 4.944048 AGCTTGGTTGCTCGTTTAATTTT 58.056 34.783 0.00 0.00 39.34 1.82
8606 9991 4.584327 AGCTTGGTTGCTCGTTTAATTT 57.416 36.364 0.00 0.00 39.34 1.82
8607 9992 5.447279 CGATAGCTTGGTTGCTCGTTTAATT 60.447 40.000 0.00 0.00 42.97 1.40
8608 9993 4.034048 CGATAGCTTGGTTGCTCGTTTAAT 59.966 41.667 0.00 0.00 42.97 1.40
8609 9994 3.369756 CGATAGCTTGGTTGCTCGTTTAA 59.630 43.478 0.00 0.00 42.97 1.52
8610 9995 2.927477 CGATAGCTTGGTTGCTCGTTTA 59.073 45.455 0.00 0.00 42.97 2.01
8611 9996 1.732259 CGATAGCTTGGTTGCTCGTTT 59.268 47.619 0.00 0.00 42.97 3.60
8612 9997 1.067142 TCGATAGCTTGGTTGCTCGTT 60.067 47.619 0.00 0.00 42.97 3.85
8613 9998 0.530744 TCGATAGCTTGGTTGCTCGT 59.469 50.000 0.00 0.00 42.97 4.18
8614 9999 1.858091 ATCGATAGCTTGGTTGCTCG 58.142 50.000 0.00 0.00 42.97 5.03
8615 10000 3.375299 ACAAATCGATAGCTTGGTTGCTC 59.625 43.478 11.84 0.00 42.97 4.26
8616 10001 3.347216 ACAAATCGATAGCTTGGTTGCT 58.653 40.909 11.84 0.00 46.11 3.91
8617 10002 3.764885 ACAAATCGATAGCTTGGTTGC 57.235 42.857 11.84 0.00 34.26 4.17
8618 10003 4.788100 CGAAACAAATCGATAGCTTGGTTG 59.212 41.667 14.64 8.81 45.48 3.77
8624 10009 4.751060 TGTACCGAAACAAATCGATAGCT 58.249 39.130 0.00 0.00 45.48 3.32
8630 10015 8.572151 GTTATGAAAATGTACCGAAACAAATCG 58.428 33.333 0.00 0.00 42.37 3.34
8652 10037 3.741388 GCCTATGGCTGTCGAGTTGTTAT 60.741 47.826 0.73 0.00 46.69 1.89
8669 10054 4.775058 TTTTTGTGTGTATTGCGCCTAT 57.225 36.364 4.18 0.29 0.00 2.57
8670 10055 4.775058 ATTTTTGTGTGTATTGCGCCTA 57.225 36.364 4.18 0.00 0.00 3.93
9161 10562 1.446966 GCGCTGGAACCTCTCTGTC 60.447 63.158 0.00 0.00 0.00 3.51
9164 10565 3.764466 CGGCGCTGGAACCTCTCT 61.764 66.667 8.83 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.