Multiple sequence alignment - TraesCS2A01G322400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G322400 chr2A 100.000 8033 0 0 1 8033 551713452 551721484 0.000000e+00 14835.0
1 TraesCS2A01G322400 chr2A 94.157 1198 25 8 3208 4376 79317159 79318340 0.000000e+00 1783.0
2 TraesCS2A01G322400 chr2A 93.937 1171 28 8 3208 4370 688639407 688640542 0.000000e+00 1729.0
3 TraesCS2A01G322400 chr2A 92.450 1192 45 6 3208 4370 672807894 672809069 0.000000e+00 1661.0
4 TraesCS2A01G322400 chr2A 91.772 1191 54 8 3208 4370 188467911 188469085 0.000000e+00 1616.0
5 TraesCS2A01G322400 chr2A 88.157 1199 99 27 3208 4370 204818575 204819766 0.000000e+00 1387.0
6 TraesCS2A01G322400 chr2A 92.929 99 5 2 4824 4922 618434239 618434143 8.400000e-30 143.0
7 TraesCS2A01G322400 chr2A 95.122 41 2 0 7516 7556 214902112 214902152 1.870000e-06 65.8
8 TraesCS2A01G322400 chr2D 96.636 2497 64 13 4920 7408 435076532 435074048 0.000000e+00 4128.0
9 TraesCS2A01G322400 chr2D 90.144 1877 100 28 148 1993 435079469 435077647 0.000000e+00 2362.0
10 TraesCS2A01G322400 chr2D 91.925 743 48 7 1590 2329 435077846 435077113 0.000000e+00 1029.0
11 TraesCS2A01G322400 chr2D 96.918 292 8 1 4434 4725 435076903 435076613 9.370000e-134 488.0
12 TraesCS2A01G322400 chr2D 90.028 351 18 10 7409 7745 435073772 435073425 9.570000e-119 438.0
13 TraesCS2A01G322400 chr2D 94.538 238 13 0 7737 7974 435072940 435072703 1.270000e-97 368.0
14 TraesCS2A01G322400 chr2D 86.624 314 23 6 1898 2193 435077394 435077082 6.010000e-86 329.0
15 TraesCS2A01G322400 chr2D 84.043 282 27 7 2047 2328 435077543 435077280 1.030000e-63 255.0
16 TraesCS2A01G322400 chr2D 90.196 51 4 1 7509 7559 579191490 579191539 1.870000e-06 65.8
17 TraesCS2A01G322400 chr2B 96.672 2404 65 7 4920 7312 513499048 513496649 0.000000e+00 3982.0
18 TraesCS2A01G322400 chr2B 90.315 2220 114 39 148 2329 513501782 513499626 0.000000e+00 2815.0
19 TraesCS2A01G322400 chr2B 89.446 1317 104 29 2448 3734 575141386 575140075 0.000000e+00 1629.0
20 TraesCS2A01G322400 chr2B 94.980 976 48 1 2450 3424 519144835 519143860 0.000000e+00 1530.0
21 TraesCS2A01G322400 chr2B 90.513 1149 90 12 2452 3594 622696243 622695108 0.000000e+00 1500.0
22 TraesCS2A01G322400 chr2B 92.330 339 24 1 4389 4725 513499469 513499131 1.570000e-131 481.0
23 TraesCS2A01G322400 chr2B 97.177 248 6 1 4142 4388 559424927 559425174 1.250000e-112 418.0
24 TraesCS2A01G322400 chr2B 85.397 315 25 7 1898 2193 513499907 513499595 2.820000e-79 307.0
25 TraesCS2A01G322400 chr2B 88.462 208 15 2 2121 2327 513499992 513499793 8.050000e-60 243.0
26 TraesCS2A01G322400 chr2B 88.235 204 13 2 7763 7956 513481595 513481393 4.850000e-57 233.0
27 TraesCS2A01G322400 chr2B 90.110 91 9 0 1956 2046 513499673 513499583 1.420000e-22 119.0
28 TraesCS2A01G322400 chr3A 95.661 1959 24 16 2449 4388 408031171 408029255 0.000000e+00 3090.0
29 TraesCS2A01G322400 chr3A 94.332 1182 32 2 3208 4370 680730261 680729096 0.000000e+00 1779.0
30 TraesCS2A01G322400 chr3A 90.055 724 37 8 3670 4376 466049266 466048561 0.000000e+00 905.0
31 TraesCS2A01G322400 chr3A 91.667 612 25 5 3774 4376 704342651 704343245 0.000000e+00 824.0
32 TraesCS2A01G322400 chr3A 99.583 240 1 0 4152 4391 408031171 408030932 9.570000e-119 438.0
33 TraesCS2A01G322400 chr3A 93.878 98 5 1 4829 4926 224976122 224976026 6.500000e-31 147.0
34 TraesCS2A01G322400 chr6A 95.445 1888 41 16 2503 4376 113511438 113513294 0.000000e+00 2968.0
35 TraesCS2A01G322400 chr6A 91.209 91 8 0 1 91 322764512 322764422 3.040000e-24 124.0
36 TraesCS2A01G322400 chr6A 91.209 91 8 0 1 91 322808178 322808088 3.040000e-24 124.0
37 TraesCS2A01G322400 chr6A 95.122 41 1 1 7519 7559 39864174 39864213 6.730000e-06 63.9
38 TraesCS2A01G322400 chr6A 100.000 32 0 0 7519 7550 58316751 58316782 8.710000e-05 60.2
39 TraesCS2A01G322400 chr6A 89.130 46 4 1 7514 7559 555519584 555519628 1.000000e-03 56.5
40 TraesCS2A01G322400 chr5A 92.872 1964 85 7 2450 4376 547536985 547535040 0.000000e+00 2800.0
41 TraesCS2A01G322400 chr5A 94.868 604 14 3 3774 4376 296481905 296482492 0.000000e+00 928.0
42 TraesCS2A01G322400 chr5A 94.681 94 4 1 4831 4923 309680170 309680263 2.340000e-30 145.0
43 TraesCS2A01G322400 chr5A 91.209 91 8 0 1 91 549421927 549422017 3.040000e-24 124.0
44 TraesCS2A01G322400 chr5A 89.362 94 10 0 1 94 556732513 556732420 1.420000e-22 119.0
45 TraesCS2A01G322400 chr7A 93.023 1204 30 11 3202 4376 99811563 99810385 0.000000e+00 1709.0
46 TraesCS2A01G322400 chr7A 91.854 1203 44 10 3202 4376 20279426 20278250 0.000000e+00 1629.0
47 TraesCS2A01G322400 chr1B 89.362 1222 98 25 2450 3647 119124186 119125399 0.000000e+00 1507.0
48 TraesCS2A01G322400 chr1B 93.698 603 21 4 3774 4376 203606894 203606309 0.000000e+00 887.0
49 TraesCS2A01G322400 chr1B 86.842 532 52 10 3871 4388 119125883 119126410 5.400000e-161 579.0
50 TraesCS2A01G322400 chr1B 83.359 655 63 17 3774 4388 313095616 313096264 1.510000e-156 564.0
51 TraesCS2A01G322400 chr1B 93.684 95 5 1 4829 4923 608052572 608052479 3.020000e-29 141.0
52 TraesCS2A01G322400 chr1B 92.308 91 7 0 1 91 377103545 377103635 6.540000e-26 130.0
53 TraesCS2A01G322400 chr6B 90.497 1147 87 13 2447 3587 203925384 203926514 0.000000e+00 1495.0
54 TraesCS2A01G322400 chr6B 85.072 623 65 15 3789 4388 203926582 203927199 1.920000e-170 610.0
55 TraesCS2A01G322400 chr7B 90.410 1147 89 13 2447 3587 13626583 13627714 0.000000e+00 1489.0
56 TraesCS2A01G322400 chr7B 99.574 235 1 0 4142 4376 428831850 428831616 5.760000e-116 429.0
57 TraesCS2A01G322400 chr7B 89.888 89 9 0 1 89 594019577 594019665 1.830000e-21 115.0
58 TraesCS2A01G322400 chr7B 92.857 42 3 0 7519 7560 505461468 505461427 2.420000e-05 62.1
59 TraesCS2A01G322400 chr1A 88.889 720 38 9 3673 4376 15369308 15368615 0.000000e+00 848.0
60 TraesCS2A01G322400 chr1A 93.750 64 4 0 1 64 495496225 495496162 6.640000e-16 97.1
61 TraesCS2A01G322400 chr1A 88.636 44 3 1 7517 7558 573325434 573325391 1.500000e-02 52.8
62 TraesCS2A01G322400 chr4B 88.651 608 38 12 3774 4370 315733725 315733138 0.000000e+00 712.0
63 TraesCS2A01G322400 chr4B 90.826 327 13 7 4064 4389 300803637 300803327 9.640000e-114 422.0
64 TraesCS2A01G322400 chr4B 90.816 98 9 0 1 98 396519699 396519602 1.820000e-26 132.0
65 TraesCS2A01G322400 chr4B 91.489 94 8 0 1 94 147072635 147072542 6.540000e-26 130.0
66 TraesCS2A01G322400 chr4B 100.000 33 0 0 7518 7550 417133587 417133619 2.420000e-05 62.1
67 TraesCS2A01G322400 chr4B 92.857 42 2 1 7518 7559 101712064 101712104 8.710000e-05 60.2
68 TraesCS2A01G322400 chr3D 99.153 236 1 1 4142 4376 268944920 268945155 2.680000e-114 424.0
69 TraesCS2A01G322400 chr6D 94.624 93 5 0 4831 4923 400063666 400063758 2.340000e-30 145.0
70 TraesCS2A01G322400 chr6D 93.750 96 5 1 4830 4925 68334380 68334474 8.400000e-30 143.0
71 TraesCS2A01G322400 chr6D 100.000 35 0 0 7516 7550 453483889 453483923 1.870000e-06 65.8
72 TraesCS2A01G322400 chr6D 100.000 32 0 0 7519 7550 438275699 438275668 8.710000e-05 60.2
73 TraesCS2A01G322400 chr6D 96.970 33 1 0 7518 7550 456406372 456406404 1.000000e-03 56.5
74 TraesCS2A01G322400 chr6D 94.286 35 2 0 7516 7550 287017170 287017136 4.000000e-03 54.7
75 TraesCS2A01G322400 chr5D 92.929 99 6 1 4828 4926 496216350 496216253 8.400000e-30 143.0
76 TraesCS2A01G322400 chr4A 93.750 96 5 1 4836 4930 475911892 475911797 8.400000e-30 143.0
77 TraesCS2A01G322400 chr4A 91.346 104 6 3 4834 4934 674557909 674557806 1.090000e-28 139.0
78 TraesCS2A01G322400 chr4A 94.118 85 5 0 1 85 246708609 246708525 6.540000e-26 130.0
79 TraesCS2A01G322400 chr3B 92.308 91 7 0 1 91 177076475 177076565 6.540000e-26 130.0
80 TraesCS2A01G322400 chr1D 89.474 95 10 0 3 97 392552674 392552768 3.940000e-23 121.0
81 TraesCS2A01G322400 chr1D 87.912 91 11 0 1 91 374365356 374365266 3.070000e-19 108.0
82 TraesCS2A01G322400 chr1D 86.813 91 12 0 1 91 476839756 476839846 1.430000e-17 102.0
83 TraesCS2A01G322400 chr1D 91.304 46 2 2 7515 7559 366474150 366474106 2.420000e-05 62.1
84 TraesCS2A01G322400 chr1D 97.059 34 1 0 7516 7549 249558976 249558943 3.130000e-04 58.4
85 TraesCS2A01G322400 chr1D 94.595 37 1 1 7514 7550 464930351 464930386 1.000000e-03 56.5
86 TraesCS2A01G322400 chr4D 90.196 51 3 2 7510 7559 416070623 416070672 1.870000e-06 65.8
87 TraesCS2A01G322400 chr4D 93.182 44 2 1 7516 7559 218516286 218516244 6.730000e-06 63.9
88 TraesCS2A01G322400 chr4D 94.737 38 2 0 7518 7555 398272018 398271981 8.710000e-05 60.2
89 TraesCS2A01G322400 chr4D 100.000 29 0 0 7516 7544 91897158 91897186 4.000000e-03 54.7
90 TraesCS2A01G322400 chr7D 93.023 43 2 1 7517 7559 362365300 362365341 2.420000e-05 62.1
91 TraesCS2A01G322400 chr7D 92.857 42 1 2 7518 7559 439236350 439236311 8.710000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G322400 chr2A 551713452 551721484 8032 False 14835.000 14835 100.000000 1 8033 1 chr2A.!!$F5 8032
1 TraesCS2A01G322400 chr2A 79317159 79318340 1181 False 1783.000 1783 94.157000 3208 4376 1 chr2A.!!$F1 1168
2 TraesCS2A01G322400 chr2A 688639407 688640542 1135 False 1729.000 1729 93.937000 3208 4370 1 chr2A.!!$F7 1162
3 TraesCS2A01G322400 chr2A 672807894 672809069 1175 False 1661.000 1661 92.450000 3208 4370 1 chr2A.!!$F6 1162
4 TraesCS2A01G322400 chr2A 188467911 188469085 1174 False 1616.000 1616 91.772000 3208 4370 1 chr2A.!!$F2 1162
5 TraesCS2A01G322400 chr2A 204818575 204819766 1191 False 1387.000 1387 88.157000 3208 4370 1 chr2A.!!$F3 1162
6 TraesCS2A01G322400 chr2D 435072703 435079469 6766 True 1174.625 4128 91.357000 148 7974 8 chr2D.!!$R1 7826
7 TraesCS2A01G322400 chr2B 575140075 575141386 1311 True 1629.000 1629 89.446000 2448 3734 1 chr2B.!!$R3 1286
8 TraesCS2A01G322400 chr2B 519143860 519144835 975 True 1530.000 1530 94.980000 2450 3424 1 chr2B.!!$R2 974
9 TraesCS2A01G322400 chr2B 622695108 622696243 1135 True 1500.000 1500 90.513000 2452 3594 1 chr2B.!!$R4 1142
10 TraesCS2A01G322400 chr2B 513496649 513501782 5133 True 1324.500 3982 90.547667 148 7312 6 chr2B.!!$R5 7164
11 TraesCS2A01G322400 chr3A 680729096 680730261 1165 True 1779.000 1779 94.332000 3208 4370 1 chr3A.!!$R3 1162
12 TraesCS2A01G322400 chr3A 408029255 408031171 1916 True 1764.000 3090 97.622000 2449 4391 2 chr3A.!!$R4 1942
13 TraesCS2A01G322400 chr3A 466048561 466049266 705 True 905.000 905 90.055000 3670 4376 1 chr3A.!!$R2 706
14 TraesCS2A01G322400 chr3A 704342651 704343245 594 False 824.000 824 91.667000 3774 4376 1 chr3A.!!$F1 602
15 TraesCS2A01G322400 chr6A 113511438 113513294 1856 False 2968.000 2968 95.445000 2503 4376 1 chr6A.!!$F3 1873
16 TraesCS2A01G322400 chr5A 547535040 547536985 1945 True 2800.000 2800 92.872000 2450 4376 1 chr5A.!!$R1 1926
17 TraesCS2A01G322400 chr5A 296481905 296482492 587 False 928.000 928 94.868000 3774 4376 1 chr5A.!!$F1 602
18 TraesCS2A01G322400 chr7A 99810385 99811563 1178 True 1709.000 1709 93.023000 3202 4376 1 chr7A.!!$R2 1174
19 TraesCS2A01G322400 chr7A 20278250 20279426 1176 True 1629.000 1629 91.854000 3202 4376 1 chr7A.!!$R1 1174
20 TraesCS2A01G322400 chr1B 119124186 119126410 2224 False 1043.000 1507 88.102000 2450 4388 2 chr1B.!!$F3 1938
21 TraesCS2A01G322400 chr1B 203606309 203606894 585 True 887.000 887 93.698000 3774 4376 1 chr1B.!!$R1 602
22 TraesCS2A01G322400 chr1B 313095616 313096264 648 False 564.000 564 83.359000 3774 4388 1 chr1B.!!$F1 614
23 TraesCS2A01G322400 chr6B 203925384 203927199 1815 False 1052.500 1495 87.784500 2447 4388 2 chr6B.!!$F1 1941
24 TraesCS2A01G322400 chr7B 13626583 13627714 1131 False 1489.000 1489 90.410000 2447 3587 1 chr7B.!!$F1 1140
25 TraesCS2A01G322400 chr1A 15368615 15369308 693 True 848.000 848 88.889000 3673 4376 1 chr1A.!!$R1 703
26 TraesCS2A01G322400 chr4B 315733138 315733725 587 True 712.000 712 88.651000 3774 4370 1 chr4B.!!$R3 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.028505 CATTGTACATGCGCTGAGGC 59.971 55.000 9.73 0.0 0.00 4.70 F
1431 1476 0.602106 CCTGATGGAGTAGCATGGCG 60.602 60.000 0.00 0.0 34.57 5.69 F
2351 2638 0.605589 CTGGAGGGGCTATAAGCTCG 59.394 60.000 0.00 0.0 44.46 5.03 F
3104 3403 0.394192 CACTGCACAGGGAAGAGTGA 59.606 55.000 2.21 0.0 36.89 3.41 F
3505 3804 1.381872 CTGGTGGATCGGGACTCCT 60.382 63.158 0.00 0.0 33.69 3.69 F
4430 7136 3.002862 GCGGAATATGCATTTGTCGGTTA 59.997 43.478 3.54 0.0 0.00 2.85 F
5706 8418 0.761187 TGCAGGTTGCTGAGAAGAGT 59.239 50.000 2.48 0.0 45.31 3.24 F
6123 8835 0.962356 AAGGGTGGCTTGATGCTTCG 60.962 55.000 0.00 0.0 42.39 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1528 1573 0.251916 TTCCCGCCACCATGAACTAG 59.748 55.000 0.00 0.0 0.00 2.57 R
3104 3403 0.257039 ATTCTCCATCGCAAGCCCTT 59.743 50.000 0.00 0.0 37.18 3.95 R
4155 6848 0.676184 CTCCTTCTAGCAGCGCCATA 59.324 55.000 2.29 0.0 0.00 2.74 R
4156 6849 1.445095 CTCCTTCTAGCAGCGCCAT 59.555 57.895 2.29 0.0 0.00 4.40 R
4921 7630 2.360165 CTGTGGAAGCAAGCAAACTTCT 59.640 45.455 11.03 0.0 41.64 2.85 R
5754 8466 1.148310 CAGTAAAGTGTGTGCTCCCG 58.852 55.000 0.00 0.0 0.00 5.14 R
6863 9575 0.035458 GATGGTTATCAGCCCCTCGG 59.965 60.000 0.00 0.0 33.38 4.63 R
7336 10057 0.325933 TGCCATCTCACCTTGGACAG 59.674 55.000 0.00 0.0 34.81 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 6.769134 ATCCATATGCCATCATTGTACATG 57.231 37.500 0.00 0.00 34.22 3.21
90 91 4.460034 TCCATATGCCATCATTGTACATGC 59.540 41.667 0.00 0.00 34.22 4.06
91 92 4.408694 CATATGCCATCATTGTACATGCG 58.591 43.478 0.00 0.00 34.22 4.73
92 93 0.381445 TGCCATCATTGTACATGCGC 59.619 50.000 0.00 0.00 0.00 6.09
93 94 0.664761 GCCATCATTGTACATGCGCT 59.335 50.000 9.73 0.00 0.00 5.92
94 95 1.598676 GCCATCATTGTACATGCGCTG 60.599 52.381 9.73 7.16 0.00 5.18
95 96 1.941975 CCATCATTGTACATGCGCTGA 59.058 47.619 9.73 0.71 0.00 4.26
96 97 2.032290 CCATCATTGTACATGCGCTGAG 60.032 50.000 9.73 0.08 0.00 3.35
97 98 1.655484 TCATTGTACATGCGCTGAGG 58.345 50.000 9.73 0.00 0.00 3.86
98 99 0.028505 CATTGTACATGCGCTGAGGC 59.971 55.000 9.73 0.00 0.00 4.70
115 116 3.960237 CGAGGCACGCTTGGTTTA 58.040 55.556 0.00 0.00 34.51 2.01
116 117 1.495951 CGAGGCACGCTTGGTTTAC 59.504 57.895 0.00 0.00 34.51 2.01
117 118 1.495951 GAGGCACGCTTGGTTTACG 59.504 57.895 0.00 0.00 0.00 3.18
118 119 1.226030 GAGGCACGCTTGGTTTACGT 61.226 55.000 0.00 0.00 41.45 3.57
121 122 4.449391 ACGCTTGGTTTACGTGCT 57.551 50.000 0.00 0.00 38.85 4.40
122 123 2.231820 ACGCTTGGTTTACGTGCTC 58.768 52.632 0.00 0.00 38.85 4.26
123 124 1.226030 ACGCTTGGTTTACGTGCTCC 61.226 55.000 0.00 0.00 38.85 4.70
124 125 1.495951 GCTTGGTTTACGTGCTCCG 59.504 57.895 0.00 0.00 44.03 4.63
133 134 4.477975 CGTGCTCCGTCTCCGTCC 62.478 72.222 0.00 0.00 0.00 4.79
134 135 4.477975 GTGCTCCGTCTCCGTCCG 62.478 72.222 0.00 0.00 0.00 4.79
477 496 6.069963 AGGGATATAATTATGTCACTGAGGGC 60.070 42.308 22.11 4.76 36.40 5.19
490 509 4.400251 AGGGCTAGCGGGTCCTGT 62.400 66.667 9.00 0.00 40.18 4.00
512 531 4.492160 CAGCGCGCCGACCTCTTA 62.492 66.667 30.33 0.00 0.00 2.10
513 532 3.528370 AGCGCGCCGACCTCTTAT 61.528 61.111 30.33 0.79 0.00 1.73
514 533 2.585247 GCGCGCCGACCTCTTATT 60.585 61.111 23.24 0.00 0.00 1.40
515 534 2.171725 GCGCGCCGACCTCTTATTT 61.172 57.895 23.24 0.00 0.00 1.40
516 535 1.702491 GCGCGCCGACCTCTTATTTT 61.702 55.000 23.24 0.00 0.00 1.82
517 536 0.725117 CGCGCCGACCTCTTATTTTT 59.275 50.000 0.00 0.00 0.00 1.94
634 653 3.485745 CGGTTAAGCCCGGGGGAT 61.486 66.667 25.28 0.00 44.32 3.85
635 654 3.012758 GGTTAAGCCCGGGGGATT 58.987 61.111 25.28 12.50 46.50 3.01
647 666 4.628471 GCCCGGGGGATTAACTTAACTTAA 60.628 45.833 25.28 0.00 37.50 1.85
650 669 5.945191 CCGGGGGATTAACTTAACTTAACAA 59.055 40.000 0.00 0.00 0.00 2.83
686 705 3.338275 ATTAGCGAAGGCGGCCCAA 62.338 57.895 17.02 0.85 46.35 4.12
868 887 1.464376 ATCTCGGCAGGTATCCACGG 61.464 60.000 0.00 0.00 0.00 4.94
909 928 4.951963 CGAAGGCCGGCTCGATCC 62.952 72.222 28.49 11.04 37.23 3.36
911 930 3.798954 GAAGGCCGGCTCGATCCAG 62.799 68.421 28.56 0.00 0.00 3.86
928 952 4.135153 GGCCTTGCTCTCGCTCGA 62.135 66.667 0.00 0.00 36.97 4.04
933 957 1.061711 CCTTGCTCTCGCTCGATTTTG 59.938 52.381 0.00 0.00 36.97 2.44
959 983 3.119708 GCTGATTTGATTGGGTCTGTGTC 60.120 47.826 0.00 0.00 0.00 3.67
1327 1363 2.902065 GCTTTTGCTAGGTACAGTGC 57.098 50.000 0.00 0.00 43.35 4.40
1328 1364 2.427506 GCTTTTGCTAGGTACAGTGCT 58.572 47.619 0.00 0.00 43.35 4.40
1329 1365 2.814336 GCTTTTGCTAGGTACAGTGCTT 59.186 45.455 0.00 0.00 43.35 3.91
1366 1403 3.002656 GGGTGATTTGATGATGCACGTAG 59.997 47.826 0.00 0.00 0.00 3.51
1367 1404 3.546815 GGTGATTTGATGATGCACGTAGC 60.547 47.826 0.00 0.00 45.96 3.58
1377 1414 2.670635 GCACGTAGCAGAGGTGATG 58.329 57.895 13.70 0.00 45.05 3.07
1431 1476 0.602106 CCTGATGGAGTAGCATGGCG 60.602 60.000 0.00 0.00 34.57 5.69
1439 1484 0.676782 AGTAGCATGGCGTTTGGGAC 60.677 55.000 0.00 0.00 0.00 4.46
1452 1497 4.320870 CGTTTGGGACTACAATGGTTACT 58.679 43.478 0.00 0.00 0.00 2.24
1476 1521 8.896744 ACTAAGTATGATGATGGTTTGATGTTG 58.103 33.333 0.00 0.00 0.00 3.33
1480 1525 5.375417 TGATGATGGTTTGATGTTGTGTC 57.625 39.130 0.00 0.00 0.00 3.67
1515 1560 2.230508 CACTGTAAGCGGTAGAAGACCA 59.769 50.000 0.00 0.00 43.46 4.02
1517 1562 3.130693 ACTGTAAGCGGTAGAAGACCATC 59.869 47.826 0.00 0.00 43.46 3.51
1573 1618 4.057432 CCGATGCTGGTTGATTTTTGTTT 58.943 39.130 0.00 0.00 0.00 2.83
1600 1645 1.348064 TGTCGGTGGAGTCCTGATTT 58.652 50.000 11.33 0.00 0.00 2.17
1601 1646 1.697432 TGTCGGTGGAGTCCTGATTTT 59.303 47.619 11.33 0.00 0.00 1.82
1631 1676 3.256558 GCGACGGTTTCTGGTTAGTTAT 58.743 45.455 0.00 0.00 0.00 1.89
1767 1813 5.182950 CAGTTTGGTCATGCAATTGGTAGTA 59.817 40.000 7.72 0.00 0.00 1.82
1809 2054 4.096984 CGGGTTCTGATTTAGTACGTAGGT 59.903 45.833 0.00 0.00 0.00 3.08
1812 2057 6.183360 GGGTTCTGATTTAGTACGTAGGTGAT 60.183 42.308 0.00 0.00 0.00 3.06
1828 2073 5.529581 AGGTGATGGTTTTTGGTAAGTTG 57.470 39.130 0.00 0.00 0.00 3.16
1864 2109 5.592104 TTTTTCTCTGAAAGGGGTTGAAC 57.408 39.130 0.00 0.00 32.73 3.18
1932 2177 6.401688 GCAACGATACACACTGCTTGTTTATA 60.402 38.462 0.00 0.00 35.67 0.98
2022 2267 7.168219 TCTAAGTATTGTCTTTGTGCTCCATT 58.832 34.615 0.00 0.00 0.00 3.16
2055 2300 8.697067 CGGTATTATGGTTATCTAAAGTTGACG 58.303 37.037 0.00 0.00 0.00 4.35
2113 2358 2.195411 TGCTTGCTGCCCAGTTCA 59.805 55.556 0.00 0.00 42.00 3.18
2119 2364 0.983467 TGCTGCCCAGTTCAGTCATA 59.017 50.000 0.00 0.00 34.21 2.15
2137 2382 7.336679 TCAGTCATACAATTGGTAGTGGATTTG 59.663 37.037 10.83 2.86 34.92 2.32
2293 2539 1.811965 CCGGTTCAGTCATGCAATTGA 59.188 47.619 10.34 0.00 0.00 2.57
2306 2552 7.037438 GTCATGCAATTGATAGTGGATTTGTT 58.963 34.615 10.34 0.00 27.36 2.83
2341 2628 1.557269 TTCTGAGCTTCTGGAGGGGC 61.557 60.000 0.00 0.00 0.00 5.80
2351 2638 0.605589 CTGGAGGGGCTATAAGCTCG 59.394 60.000 0.00 0.00 44.46 5.03
2361 2648 4.326548 GGGCTATAAGCTCGCGTTTATAAG 59.673 45.833 5.77 0.00 41.99 1.73
2372 2659 4.567959 TCGCGTTTATAAGTCCTAAAAGCC 59.432 41.667 5.77 0.00 39.10 4.35
2393 2680 4.174009 CCTACGTATGTGACAGTTTCTGG 58.826 47.826 0.00 0.00 35.51 3.86
2396 2683 5.204409 ACGTATGTGACAGTTTCTGGTAA 57.796 39.130 0.00 0.00 35.51 2.85
2424 2711 3.130340 GGTTGCTTGTTCTTGACTGGAAA 59.870 43.478 0.00 0.00 0.00 3.13
2435 2722 9.733556 TGTTCTTGACTGGAAAGCTATAAATTA 57.266 29.630 0.00 0.00 0.00 1.40
2446 2733 8.073768 GGAAAGCTATAAATTATTTAGTGCGCA 58.926 33.333 5.66 5.66 34.59 6.09
2573 2863 8.359875 TGATTAGATTGATACATCTCCTCTCC 57.640 38.462 0.00 0.00 0.00 3.71
3104 3403 0.394192 CACTGCACAGGGAAGAGTGA 59.606 55.000 2.21 0.00 36.89 3.41
3368 3667 4.340246 CAGCCTGCAGCCTCACCA 62.340 66.667 8.66 0.00 45.47 4.17
3505 3804 1.381872 CTGGTGGATCGGGACTCCT 60.382 63.158 0.00 0.00 33.69 3.69
4143 6836 7.282585 AGCTAGCTGATACCAAATTGTTATGA 58.717 34.615 18.57 0.00 0.00 2.15
4144 6837 7.941238 AGCTAGCTGATACCAAATTGTTATGAT 59.059 33.333 18.57 0.00 0.00 2.45
4145 6838 9.219603 GCTAGCTGATACCAAATTGTTATGATA 57.780 33.333 7.70 0.00 0.00 2.15
4147 6840 8.396272 AGCTGATACCAAATTGTTATGATACC 57.604 34.615 0.00 0.00 0.00 2.73
4148 6841 7.998383 AGCTGATACCAAATTGTTATGATACCA 59.002 33.333 0.00 0.00 0.00 3.25
4149 6842 8.629158 GCTGATACCAAATTGTTATGATACCAA 58.371 33.333 0.00 0.00 0.00 3.67
4388 7082 3.492137 GGGCCCATTACGTACTCTAACAG 60.492 52.174 19.95 0.00 0.00 3.16
4389 7083 3.121544 GCCCATTACGTACTCTAACAGC 58.878 50.000 0.00 0.00 0.00 4.40
4400 7094 6.265649 ACGTACTCTAACAGCAATATCCTCAT 59.734 38.462 0.00 0.00 0.00 2.90
4425 7131 3.969117 TCAGCGGAATATGCATTTGTC 57.031 42.857 3.54 0.00 33.85 3.18
4430 7136 3.002862 GCGGAATATGCATTTGTCGGTTA 59.997 43.478 3.54 0.00 0.00 2.85
4431 7137 4.523813 CGGAATATGCATTTGTCGGTTAC 58.476 43.478 3.54 0.00 0.00 2.50
4453 7161 3.522553 GATAGTCTGGTGTGGTTACTGC 58.477 50.000 0.00 0.00 0.00 4.40
4542 7250 4.560108 GCTCAAAGTGCAATCTCCAATTGT 60.560 41.667 4.43 0.00 0.00 2.71
4698 7406 8.929827 TGATGATGTTGTTTAGGCAATTATTG 57.070 30.769 0.00 0.00 0.00 1.90
4739 7447 8.884124 TCATTTTTGGACTTCTATTCCATTCT 57.116 30.769 0.00 0.00 42.88 2.40
4740 7448 9.312904 TCATTTTTGGACTTCTATTCCATTCTT 57.687 29.630 0.00 0.00 42.88 2.52
4741 7449 9.933723 CATTTTTGGACTTCTATTCCATTCTTT 57.066 29.630 0.00 0.00 42.88 2.52
4743 7451 9.981114 TTTTTGGACTTCTATTCCATTCTTTTC 57.019 29.630 0.00 0.00 42.88 2.29
4744 7452 8.940397 TTTGGACTTCTATTCCATTCTTTTCT 57.060 30.769 0.00 0.00 42.88 2.52
4745 7453 8.940397 TTGGACTTCTATTCCATTCTTTTCTT 57.060 30.769 0.00 0.00 42.88 2.52
4746 7454 8.940397 TGGACTTCTATTCCATTCTTTTCTTT 57.060 30.769 0.00 0.00 38.28 2.52
4749 7457 9.995957 GACTTCTATTCCATTCTTTTCTTTAGC 57.004 33.333 0.00 0.00 0.00 3.09
4750 7458 8.669243 ACTTCTATTCCATTCTTTTCTTTAGCG 58.331 33.333 0.00 0.00 0.00 4.26
4751 7459 8.561738 TTCTATTCCATTCTTTTCTTTAGCGT 57.438 30.769 0.00 0.00 0.00 5.07
4752 7460 9.661563 TTCTATTCCATTCTTTTCTTTAGCGTA 57.338 29.630 0.00 0.00 0.00 4.42
4753 7461 9.832445 TCTATTCCATTCTTTTCTTTAGCGTAT 57.168 29.630 0.00 0.00 0.00 3.06
4766 7474 7.108841 TCTTTAGCGTATCTGATTTGGTACT 57.891 36.000 0.00 0.00 0.00 2.73
4767 7475 6.978659 TCTTTAGCGTATCTGATTTGGTACTG 59.021 38.462 0.00 0.00 0.00 2.74
4800 7508 4.191544 CCATTTCCATACGTCATGTGTCT 58.808 43.478 0.00 0.00 32.21 3.41
4821 7529 6.206438 TGTCTGCTTTTGTGATATTAACTGCA 59.794 34.615 0.00 0.00 0.00 4.41
4832 7540 9.836864 TGTGATATTAACTGCAGACATCTAAAT 57.163 29.630 23.35 10.60 0.00 1.40
4840 7549 8.879342 AACTGCAGACATCTAAATATGTACTC 57.121 34.615 23.35 0.00 40.17 2.59
4841 7550 7.437748 ACTGCAGACATCTAAATATGTACTCC 58.562 38.462 23.35 0.00 40.17 3.85
4842 7551 6.759272 TGCAGACATCTAAATATGTACTCCC 58.241 40.000 0.00 0.00 40.17 4.30
4843 7552 6.554982 TGCAGACATCTAAATATGTACTCCCT 59.445 38.462 0.00 0.00 40.17 4.20
4844 7553 7.093992 GCAGACATCTAAATATGTACTCCCTC 58.906 42.308 0.00 0.00 40.17 4.30
4845 7554 7.607250 CAGACATCTAAATATGTACTCCCTCC 58.393 42.308 0.00 0.00 40.17 4.30
4846 7555 7.233553 CAGACATCTAAATATGTACTCCCTCCA 59.766 40.741 0.00 0.00 40.17 3.86
4847 7556 7.958583 AGACATCTAAATATGTACTCCCTCCAT 59.041 37.037 0.00 0.00 40.17 3.41
4848 7557 8.511748 ACATCTAAATATGTACTCCCTCCATT 57.488 34.615 0.00 0.00 38.31 3.16
4849 7558 8.598041 ACATCTAAATATGTACTCCCTCCATTC 58.402 37.037 0.00 0.00 38.31 2.67
4850 7559 7.554959 TCTAAATATGTACTCCCTCCATTCC 57.445 40.000 0.00 0.00 0.00 3.01
4851 7560 7.079700 TCTAAATATGTACTCCCTCCATTCCA 58.920 38.462 0.00 0.00 0.00 3.53
4852 7561 6.786843 AAATATGTACTCCCTCCATTCCAT 57.213 37.500 0.00 0.00 0.00 3.41
4853 7562 7.888514 AAATATGTACTCCCTCCATTCCATA 57.111 36.000 0.00 0.00 0.00 2.74
4854 7563 8.468547 AAATATGTACTCCCTCCATTCCATAT 57.531 34.615 0.00 0.00 0.00 1.78
4855 7564 8.468547 AATATGTACTCCCTCCATTCCATATT 57.531 34.615 0.00 0.00 32.36 1.28
4856 7565 9.574577 AATATGTACTCCCTCCATTCCATATTA 57.425 33.333 0.00 0.00 34.32 0.98
4857 7566 6.681729 TGTACTCCCTCCATTCCATATTAC 57.318 41.667 0.00 0.00 0.00 1.89
4858 7567 6.390504 TGTACTCCCTCCATTCCATATTACT 58.609 40.000 0.00 0.00 0.00 2.24
4859 7568 6.497259 TGTACTCCCTCCATTCCATATTACTC 59.503 42.308 0.00 0.00 0.00 2.59
4860 7569 4.528596 ACTCCCTCCATTCCATATTACTCG 59.471 45.833 0.00 0.00 0.00 4.18
4861 7570 4.489737 TCCCTCCATTCCATATTACTCGT 58.510 43.478 0.00 0.00 0.00 4.18
4862 7571 4.527038 TCCCTCCATTCCATATTACTCGTC 59.473 45.833 0.00 0.00 0.00 4.20
4863 7572 4.486090 CCTCCATTCCATATTACTCGTCG 58.514 47.826 0.00 0.00 0.00 5.12
4864 7573 3.909430 TCCATTCCATATTACTCGTCGC 58.091 45.455 0.00 0.00 0.00 5.19
4865 7574 3.572682 TCCATTCCATATTACTCGTCGCT 59.427 43.478 0.00 0.00 0.00 4.93
4866 7575 3.675225 CCATTCCATATTACTCGTCGCTG 59.325 47.826 0.00 0.00 0.00 5.18
4867 7576 4.546570 CATTCCATATTACTCGTCGCTGA 58.453 43.478 0.00 0.00 0.00 4.26
4868 7577 4.848562 TTCCATATTACTCGTCGCTGAT 57.151 40.909 0.00 0.00 0.00 2.90
4869 7578 4.848562 TCCATATTACTCGTCGCTGATT 57.151 40.909 0.00 0.00 0.00 2.57
4870 7579 5.196341 TCCATATTACTCGTCGCTGATTT 57.804 39.130 0.00 0.00 0.00 2.17
4871 7580 6.321848 TCCATATTACTCGTCGCTGATTTA 57.678 37.500 0.00 0.00 0.00 1.40
4872 7581 6.379386 TCCATATTACTCGTCGCTGATTTAG 58.621 40.000 0.00 0.00 0.00 1.85
4873 7582 6.016527 TCCATATTACTCGTCGCTGATTTAGT 60.017 38.462 0.00 0.00 0.00 2.24
4874 7583 7.173735 TCCATATTACTCGTCGCTGATTTAGTA 59.826 37.037 0.00 0.00 0.00 1.82
4875 7584 7.270793 CCATATTACTCGTCGCTGATTTAGTAC 59.729 40.741 0.00 0.00 0.00 2.73
4876 7585 5.550232 TTACTCGTCGCTGATTTAGTACA 57.450 39.130 0.00 0.00 0.00 2.90
4877 7586 4.430137 ACTCGTCGCTGATTTAGTACAA 57.570 40.909 0.00 0.00 0.00 2.41
4878 7587 4.164294 ACTCGTCGCTGATTTAGTACAAC 58.836 43.478 0.00 0.00 0.00 3.32
4879 7588 4.082895 ACTCGTCGCTGATTTAGTACAACT 60.083 41.667 0.00 0.00 0.00 3.16
4880 7589 4.801891 TCGTCGCTGATTTAGTACAACTT 58.198 39.130 0.00 0.00 0.00 2.66
4881 7590 4.619760 TCGTCGCTGATTTAGTACAACTTG 59.380 41.667 0.00 0.00 0.00 3.16
4882 7591 4.201589 CGTCGCTGATTTAGTACAACTTGG 60.202 45.833 0.00 0.00 0.00 3.61
4883 7592 4.689345 GTCGCTGATTTAGTACAACTTGGT 59.311 41.667 0.00 0.00 0.00 3.67
4884 7593 5.865552 GTCGCTGATTTAGTACAACTTGGTA 59.134 40.000 0.00 0.00 0.00 3.25
4885 7594 5.865552 TCGCTGATTTAGTACAACTTGGTAC 59.134 40.000 0.00 0.00 43.10 3.34
4895 7604 6.091123 GTACAACTTGGTACTAAATCAGCG 57.909 41.667 0.00 0.00 40.34 5.18
4896 7605 4.890088 ACAACTTGGTACTAAATCAGCGA 58.110 39.130 0.00 0.00 0.00 4.93
4897 7606 4.689345 ACAACTTGGTACTAAATCAGCGAC 59.311 41.667 0.00 0.00 0.00 5.19
4898 7607 4.530710 ACTTGGTACTAAATCAGCGACA 57.469 40.909 0.00 0.00 0.00 4.35
4899 7608 4.890088 ACTTGGTACTAAATCAGCGACAA 58.110 39.130 0.00 0.00 0.00 3.18
4900 7609 4.929808 ACTTGGTACTAAATCAGCGACAAG 59.070 41.667 0.00 0.00 37.34 3.16
4901 7610 4.530710 TGGTACTAAATCAGCGACAAGT 57.469 40.909 0.00 0.00 0.00 3.16
4902 7611 5.648178 TGGTACTAAATCAGCGACAAGTA 57.352 39.130 0.00 0.00 0.00 2.24
4903 7612 6.028146 TGGTACTAAATCAGCGACAAGTAA 57.972 37.500 0.00 0.00 0.00 2.24
4904 7613 6.636705 TGGTACTAAATCAGCGACAAGTAAT 58.363 36.000 0.00 0.00 0.00 1.89
4905 7614 7.774134 TGGTACTAAATCAGCGACAAGTAATA 58.226 34.615 0.00 0.00 0.00 0.98
4906 7615 8.418662 TGGTACTAAATCAGCGACAAGTAATAT 58.581 33.333 0.00 0.00 0.00 1.28
4907 7616 8.700644 GGTACTAAATCAGCGACAAGTAATATG 58.299 37.037 0.00 0.00 0.00 1.78
4908 7617 7.715265 ACTAAATCAGCGACAAGTAATATGG 57.285 36.000 0.00 0.00 0.00 2.74
4909 7618 7.497595 ACTAAATCAGCGACAAGTAATATGGA 58.502 34.615 0.00 0.00 0.00 3.41
4910 7619 7.985184 ACTAAATCAGCGACAAGTAATATGGAA 59.015 33.333 0.00 0.00 0.00 3.53
4911 7620 6.604735 AATCAGCGACAAGTAATATGGAAC 57.395 37.500 0.00 0.00 0.00 3.62
4989 7698 6.421202 AGTTCTTTTCTACTGTTACTTCTGCG 59.579 38.462 0.00 0.00 0.00 5.18
5235 7947 4.322080 TTCGTTCTCTGTTGATGTGACT 57.678 40.909 0.00 0.00 0.00 3.41
5646 8358 2.365617 TCCTGTTTTTCTCACTCGAGCT 59.634 45.455 13.61 0.00 39.30 4.09
5706 8418 0.761187 TGCAGGTTGCTGAGAAGAGT 59.239 50.000 2.48 0.00 45.31 3.24
5730 8442 1.812922 GTCAGCTCCTCACCATGCG 60.813 63.158 0.00 0.00 0.00 4.73
5775 8487 2.288579 CGGGAGCACACACTTTACTGTA 60.289 50.000 0.00 0.00 0.00 2.74
5871 8583 1.453669 CATAAGGGAGCTGGGCCTC 59.546 63.158 4.53 0.00 0.00 4.70
5883 8595 1.933629 GGGCCTCCCATTCTTCCAT 59.066 57.895 0.84 0.00 44.65 3.41
6123 8835 0.962356 AAGGGTGGCTTGATGCTTCG 60.962 55.000 0.00 0.00 42.39 3.79
6170 8882 4.705991 TGAAGATATGTGGAATGCAAGCAA 59.294 37.500 0.00 0.00 0.00 3.91
6300 9012 4.638421 CCTGAATACAACGCCATTTTCCTA 59.362 41.667 0.00 0.00 0.00 2.94
6699 9411 4.077822 CAAAGGACAAGATCTCCAAGCTT 58.922 43.478 0.00 0.00 32.61 3.74
6759 9471 2.887568 CAGTGCATCCGCGACCTC 60.888 66.667 8.23 0.00 42.97 3.85
6906 9618 1.741770 GATGACCAACGGCTTCGCT 60.742 57.895 0.00 0.00 37.41 4.93
6924 9636 3.121030 CGCGTCAAGGAAGGCCTG 61.121 66.667 5.69 0.00 46.28 4.85
6948 9660 0.760945 ATCTGACCCTCGACATCCCC 60.761 60.000 0.00 0.00 0.00 4.81
7040 9752 1.994507 CCCTGCCCTGAGCTCTTCT 60.995 63.158 16.19 0.00 44.23 2.85
7041 9753 1.560866 CCCTGCCCTGAGCTCTTCTT 61.561 60.000 16.19 0.00 44.23 2.52
7043 9755 0.107752 CTGCCCTGAGCTCTTCTTCC 60.108 60.000 16.19 0.00 44.23 3.46
7044 9756 1.223211 GCCCTGAGCTCTTCTTCCC 59.777 63.158 16.19 0.00 38.99 3.97
7049 9761 2.117865 CTGAGCTCTTCTTCCCCAGAT 58.882 52.381 16.19 0.00 0.00 2.90
7054 9766 2.402564 CTCTTCTTCCCCAGATGGCTA 58.597 52.381 0.00 0.00 0.00 3.93
7056 9768 3.189606 TCTTCTTCCCCAGATGGCTAAA 58.810 45.455 0.00 0.00 0.00 1.85
7061 9773 1.284785 TCCCCAGATGGCTAAACTTGG 59.715 52.381 0.00 0.00 0.00 3.61
7063 9775 2.291540 CCCCAGATGGCTAAACTTGGAA 60.292 50.000 0.00 0.00 0.00 3.53
7064 9776 3.019564 CCCAGATGGCTAAACTTGGAAG 58.980 50.000 0.00 0.00 0.00 3.46
7145 9866 1.825474 TCCTAGTCTTTTCTGAGCCGG 59.175 52.381 0.00 0.00 0.00 6.13
7270 9991 5.923204 TGTTTTTAAATTGCTGTCCATGGT 58.077 33.333 12.58 0.00 0.00 3.55
7288 10009 6.097554 TCCATGGTTTTCTGCTTTTGAAGTTA 59.902 34.615 12.58 0.00 0.00 2.24
7329 10050 1.540267 TATGTTTTCGTGGCCTTGGG 58.460 50.000 3.32 0.00 0.00 4.12
7368 10089 4.697352 GTGAGATGGCAGAACACAAATAGT 59.303 41.667 13.15 0.00 0.00 2.12
7369 10090 5.874810 GTGAGATGGCAGAACACAAATAGTA 59.125 40.000 13.15 0.00 0.00 1.82
7370 10091 6.036517 GTGAGATGGCAGAACACAAATAGTAG 59.963 42.308 13.15 0.00 0.00 2.57
7392 10113 3.130693 GGAGTAGCTCACAATACGGAAGT 59.869 47.826 0.00 0.00 39.26 3.01
7405 10126 2.104859 GGAAGTTACCGCGGAAGGC 61.105 63.158 35.90 18.22 38.69 4.35
7408 10129 1.823169 AAGTTACCGCGGAAGGCTCA 61.823 55.000 35.90 3.68 40.44 4.26
7410 10131 2.575893 TTACCGCGGAAGGCTCACA 61.576 57.895 35.90 0.72 40.44 3.58
7411 10132 2.102109 TTACCGCGGAAGGCTCACAA 62.102 55.000 35.90 7.88 40.44 3.33
7479 10475 2.877168 AGCGCCATCATCTCTCAATTTC 59.123 45.455 2.29 0.00 0.00 2.17
7486 10482 4.515028 TCATCTCTCAATTTCAGCCCAT 57.485 40.909 0.00 0.00 0.00 4.00
7495 10491 7.549839 TCTCAATTTCAGCCCATTAATCTTTG 58.450 34.615 0.00 0.00 0.00 2.77
7504 10500 0.738389 ATTAATCTTTGGCGGCACCG 59.262 50.000 12.92 4.30 43.94 4.94
7505 10501 0.606944 TTAATCTTTGGCGGCACCGT 60.607 50.000 12.92 0.00 43.94 4.83
7526 10522 3.577415 GTGCGGGTATAATCTACTCCCTT 59.423 47.826 0.00 0.00 36.30 3.95
7531 10527 4.462132 GGGTATAATCTACTCCCTTCGTCC 59.538 50.000 0.00 0.00 35.63 4.79
7539 10545 5.900437 TCTACTCCCTTCGTCCCATAATAT 58.100 41.667 0.00 0.00 0.00 1.28
7540 10546 7.036154 TCTACTCCCTTCGTCCCATAATATA 57.964 40.000 0.00 0.00 0.00 0.86
7542 10548 6.607004 ACTCCCTTCGTCCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
7543 10549 6.320518 ACTCCCTTCGTCCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
7546 10552 6.210784 TCCCTTCGTCCCATAATATAAGAGTG 59.789 42.308 0.00 0.00 0.00 3.51
7550 10556 8.657074 TTCGTCCCATAATATAAGAGTGTTTG 57.343 34.615 0.00 0.00 0.00 2.93
7551 10557 7.788026 TCGTCCCATAATATAAGAGTGTTTGT 58.212 34.615 0.00 0.00 0.00 2.83
7552 10558 8.262227 TCGTCCCATAATATAAGAGTGTTTGTT 58.738 33.333 0.00 0.00 0.00 2.83
7576 10582 2.544844 CTCAGGTGGAGGGGTAGTTA 57.455 55.000 0.00 0.00 40.13 2.24
7578 10584 3.385115 CTCAGGTGGAGGGGTAGTTAAT 58.615 50.000 0.00 0.00 40.13 1.40
7579 10585 3.780850 CTCAGGTGGAGGGGTAGTTAATT 59.219 47.826 0.00 0.00 40.13 1.40
7580 10586 4.962839 TCAGGTGGAGGGGTAGTTAATTA 58.037 43.478 0.00 0.00 0.00 1.40
7581 10587 4.966805 TCAGGTGGAGGGGTAGTTAATTAG 59.033 45.833 0.00 0.00 0.00 1.73
7582 10588 4.966805 CAGGTGGAGGGGTAGTTAATTAGA 59.033 45.833 0.00 0.00 0.00 2.10
7584 10590 5.427806 AGGTGGAGGGGTAGTTAATTAGAAC 59.572 44.000 0.00 0.00 0.00 3.01
7586 10592 6.069789 GGTGGAGGGGTAGTTAATTAGAACTT 60.070 42.308 0.00 0.00 40.22 2.66
7592 10598 9.059023 AGGGGTAGTTAATTAGAACTTTCATCT 57.941 33.333 0.00 0.00 40.22 2.90
7674 10681 3.940209 CAGACCTGCTCATCCTATCTC 57.060 52.381 0.00 0.00 0.00 2.75
7675 10682 3.499338 CAGACCTGCTCATCCTATCTCT 58.501 50.000 0.00 0.00 0.00 3.10
7676 10683 3.507233 CAGACCTGCTCATCCTATCTCTC 59.493 52.174 0.00 0.00 0.00 3.20
7768 11270 7.423844 TCGATAGATAGTTATTGCCCATCAT 57.576 36.000 0.00 0.00 42.67 2.45
7812 11314 4.631377 CGCTGTTATCTTGGTCAATTCTCA 59.369 41.667 0.00 0.00 0.00 3.27
7859 11361 1.808945 CTGTTCTCCTGTGATGCCAAC 59.191 52.381 0.00 0.00 0.00 3.77
7861 11363 2.158623 TGTTCTCCTGTGATGCCAACTT 60.159 45.455 0.00 0.00 0.00 2.66
7868 11370 2.221169 TGTGATGCCAACTTCTGTGAC 58.779 47.619 0.00 0.00 0.00 3.67
7890 11392 0.392863 CGTGATCCATCAGGCAACCA 60.393 55.000 0.00 0.00 37.51 3.67
7892 11394 2.485302 CGTGATCCATCAGGCAACCATA 60.485 50.000 0.00 0.00 37.51 2.74
7913 11415 1.734465 GATTTCTGACCAAGTGAGGCG 59.266 52.381 0.00 0.00 0.00 5.52
7962 11464 3.780626 GGCTACTACCCATACTCATCCT 58.219 50.000 0.00 0.00 0.00 3.24
7999 11501 3.093278 CGGCTTCCGCTCATGTTC 58.907 61.111 0.00 0.00 41.17 3.18
8000 11502 1.448540 CGGCTTCCGCTCATGTTCT 60.449 57.895 0.00 0.00 41.17 3.01
8001 11503 1.021390 CGGCTTCCGCTCATGTTCTT 61.021 55.000 0.00 0.00 41.17 2.52
8002 11504 0.729690 GGCTTCCGCTCATGTTCTTC 59.270 55.000 0.00 0.00 36.09 2.87
8003 11505 1.677217 GGCTTCCGCTCATGTTCTTCT 60.677 52.381 0.00 0.00 36.09 2.85
8004 11506 2.418746 GGCTTCCGCTCATGTTCTTCTA 60.419 50.000 0.00 0.00 36.09 2.10
8005 11507 2.605366 GCTTCCGCTCATGTTCTTCTAC 59.395 50.000 0.00 0.00 0.00 2.59
8006 11508 2.961526 TCCGCTCATGTTCTTCTACC 57.038 50.000 0.00 0.00 0.00 3.18
8007 11509 1.480954 TCCGCTCATGTTCTTCTACCC 59.519 52.381 0.00 0.00 0.00 3.69
8008 11510 1.473434 CCGCTCATGTTCTTCTACCCC 60.473 57.143 0.00 0.00 0.00 4.95
8009 11511 1.802880 CGCTCATGTTCTTCTACCCCG 60.803 57.143 0.00 0.00 0.00 5.73
8010 11512 1.473434 GCTCATGTTCTTCTACCCCGG 60.473 57.143 0.00 0.00 0.00 5.73
8011 11513 0.539986 TCATGTTCTTCTACCCCGGC 59.460 55.000 0.00 0.00 0.00 6.13
8012 11514 0.541863 CATGTTCTTCTACCCCGGCT 59.458 55.000 0.00 0.00 0.00 5.52
8013 11515 0.541863 ATGTTCTTCTACCCCGGCTG 59.458 55.000 0.00 0.00 0.00 4.85
8014 11516 1.221021 GTTCTTCTACCCCGGCTGG 59.779 63.158 3.88 3.88 0.00 4.85
8015 11517 2.666098 TTCTTCTACCCCGGCTGGC 61.666 63.158 5.85 0.00 0.00 4.85
8016 11518 3.083997 CTTCTACCCCGGCTGGCT 61.084 66.667 5.85 0.00 0.00 4.75
8017 11519 1.760875 CTTCTACCCCGGCTGGCTA 60.761 63.158 5.85 0.00 0.00 3.93
8018 11520 1.074775 TTCTACCCCGGCTGGCTAT 60.075 57.895 5.85 0.00 0.00 2.97
8019 11521 0.189080 TTCTACCCCGGCTGGCTATA 59.811 55.000 5.85 0.00 0.00 1.31
8020 11522 0.412244 TCTACCCCGGCTGGCTATAT 59.588 55.000 5.85 0.00 0.00 0.86
8021 11523 1.642238 TCTACCCCGGCTGGCTATATA 59.358 52.381 5.85 0.00 0.00 0.86
8022 11524 2.246588 TCTACCCCGGCTGGCTATATAT 59.753 50.000 5.85 0.00 0.00 0.86
8023 11525 1.497161 ACCCCGGCTGGCTATATATC 58.503 55.000 5.85 0.00 0.00 1.63
8024 11526 0.759346 CCCCGGCTGGCTATATATCC 59.241 60.000 5.85 0.00 0.00 2.59
8025 11527 0.389391 CCCGGCTGGCTATATATCCG 59.611 60.000 5.85 2.15 36.90 4.18
8026 11528 1.112113 CCGGCTGGCTATATATCCGT 58.888 55.000 0.00 0.00 35.52 4.69
8027 11529 1.202417 CCGGCTGGCTATATATCCGTG 60.202 57.143 0.00 0.00 35.52 4.94
8028 11530 1.476891 CGGCTGGCTATATATCCGTGT 59.523 52.381 0.00 0.00 32.93 4.49
8029 11531 2.735444 CGGCTGGCTATATATCCGTGTG 60.735 54.545 0.00 0.00 32.93 3.82
8030 11532 2.233922 GGCTGGCTATATATCCGTGTGT 59.766 50.000 0.00 0.00 0.00 3.72
8031 11533 3.446161 GGCTGGCTATATATCCGTGTGTA 59.554 47.826 0.00 0.00 0.00 2.90
8032 11534 4.099573 GGCTGGCTATATATCCGTGTGTAT 59.900 45.833 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 9.563748 CATGTACAATGATGGCATATGGATATA 57.436 33.333 0.00 0.00 33.44 0.86
64 65 7.013942 GCATGTACAATGATGGCATATGGATAT 59.986 37.037 0.00 0.00 33.44 1.63
65 66 6.319405 GCATGTACAATGATGGCATATGGATA 59.681 38.462 0.00 0.00 33.44 2.59
66 67 5.126545 GCATGTACAATGATGGCATATGGAT 59.873 40.000 0.00 0.00 33.44 3.41
67 68 4.460034 GCATGTACAATGATGGCATATGGA 59.540 41.667 0.00 0.00 33.44 3.41
68 69 4.673320 CGCATGTACAATGATGGCATATGG 60.673 45.833 0.00 0.00 33.44 2.74
69 70 4.408694 CGCATGTACAATGATGGCATATG 58.591 43.478 0.00 2.78 33.44 1.78
70 71 3.119743 GCGCATGTACAATGATGGCATAT 60.120 43.478 0.30 0.00 33.44 1.78
71 72 2.226200 GCGCATGTACAATGATGGCATA 59.774 45.455 0.30 0.00 33.44 3.14
72 73 1.001048 GCGCATGTACAATGATGGCAT 60.001 47.619 0.30 0.00 35.92 4.40
73 74 0.381445 GCGCATGTACAATGATGGCA 59.619 50.000 0.30 0.00 0.00 4.92
74 75 0.664761 AGCGCATGTACAATGATGGC 59.335 50.000 11.47 0.00 0.00 4.40
75 76 1.941975 TCAGCGCATGTACAATGATGG 59.058 47.619 11.47 0.00 0.00 3.51
76 77 2.032290 CCTCAGCGCATGTACAATGATG 60.032 50.000 11.47 1.80 0.00 3.07
77 78 2.216046 CCTCAGCGCATGTACAATGAT 58.784 47.619 11.47 0.00 0.00 2.45
78 79 1.655484 CCTCAGCGCATGTACAATGA 58.345 50.000 11.47 0.00 0.00 2.57
79 80 0.028505 GCCTCAGCGCATGTACAATG 59.971 55.000 11.47 0.12 0.00 2.82
80 81 2.397751 GCCTCAGCGCATGTACAAT 58.602 52.632 11.47 0.00 0.00 2.71
81 82 3.889227 GCCTCAGCGCATGTACAA 58.111 55.556 11.47 0.00 0.00 2.41
98 99 1.495951 GTAAACCAAGCGTGCCTCG 59.504 57.895 0.00 0.00 43.12 4.63
99 100 1.226030 ACGTAAACCAAGCGTGCCTC 61.226 55.000 0.00 0.00 37.47 4.70
100 101 1.227734 ACGTAAACCAAGCGTGCCT 60.228 52.632 0.00 0.00 37.47 4.75
101 102 1.082366 CACGTAAACCAAGCGTGCC 60.082 57.895 3.46 0.00 46.86 5.01
102 103 4.507794 CACGTAAACCAAGCGTGC 57.492 55.556 3.46 0.00 46.86 5.34
104 105 1.226030 GGAGCACGTAAACCAAGCGT 61.226 55.000 0.00 0.00 39.59 5.07
105 106 1.495951 GGAGCACGTAAACCAAGCG 59.504 57.895 0.00 0.00 0.00 4.68
106 107 1.495951 CGGAGCACGTAAACCAAGC 59.504 57.895 0.00 0.00 37.93 4.01
130 131 2.884207 GCGATGGACGTTCCGGAC 60.884 66.667 1.83 0.00 40.17 4.79
131 132 4.137872 GGCGATGGACGTTCCGGA 62.138 66.667 0.00 0.00 40.17 5.14
229 231 4.263572 TGTGGTGGTTCGGGGCTG 62.264 66.667 0.00 0.00 0.00 4.85
477 496 1.028330 TGTCGTACAGGACCCGCTAG 61.028 60.000 0.00 0.00 36.07 3.42
507 526 7.550906 ACCGATGGAAGAAGAGAAAAATAAGAG 59.449 37.037 0.00 0.00 0.00 2.85
508 527 7.394816 ACCGATGGAAGAAGAGAAAAATAAGA 58.605 34.615 0.00 0.00 0.00 2.10
509 528 7.550906 AGACCGATGGAAGAAGAGAAAAATAAG 59.449 37.037 0.00 0.00 0.00 1.73
510 529 7.394816 AGACCGATGGAAGAAGAGAAAAATAA 58.605 34.615 0.00 0.00 0.00 1.40
511 530 6.947464 AGACCGATGGAAGAAGAGAAAAATA 58.053 36.000 0.00 0.00 0.00 1.40
512 531 5.810095 AGACCGATGGAAGAAGAGAAAAAT 58.190 37.500 0.00 0.00 0.00 1.82
513 532 5.221641 TGAGACCGATGGAAGAAGAGAAAAA 60.222 40.000 0.00 0.00 0.00 1.94
514 533 4.283467 TGAGACCGATGGAAGAAGAGAAAA 59.717 41.667 0.00 0.00 0.00 2.29
515 534 3.832490 TGAGACCGATGGAAGAAGAGAAA 59.168 43.478 0.00 0.00 0.00 2.52
516 535 3.193691 GTGAGACCGATGGAAGAAGAGAA 59.806 47.826 0.00 0.00 0.00 2.87
517 536 2.755655 GTGAGACCGATGGAAGAAGAGA 59.244 50.000 0.00 0.00 0.00 3.10
633 652 6.209192 CCCCGGGTTTGTTAAGTTAAGTTAAT 59.791 38.462 21.85 0.00 0.00 1.40
634 653 5.534278 CCCCGGGTTTGTTAAGTTAAGTTAA 59.466 40.000 21.85 10.79 0.00 2.01
635 654 5.069318 CCCCGGGTTTGTTAAGTTAAGTTA 58.931 41.667 21.85 0.00 0.00 2.24
638 657 2.821378 CCCCCGGGTTTGTTAAGTTAAG 59.179 50.000 21.85 0.00 0.00 1.85
671 690 1.764571 TATATTGGGCCGCCTTCGCT 61.765 55.000 9.86 0.00 0.00 4.93
686 705 5.335740 CCGCTCTGACACCTATCGTTTATAT 60.336 44.000 0.00 0.00 0.00 0.86
868 887 3.805891 GATCGGGAGGAGCTGCTGC 62.806 68.421 18.67 18.67 40.05 5.25
894 913 3.854669 CTGGATCGAGCCGGCCTT 61.855 66.667 26.15 4.93 0.00 4.35
902 921 1.227497 GAGCAAGGCCTGGATCGAG 60.227 63.158 12.85 0.00 0.00 4.04
904 923 1.227497 GAGAGCAAGGCCTGGATCG 60.227 63.158 19.70 0.95 0.00 3.69
906 925 2.906458 CGAGAGCAAGGCCTGGAT 59.094 61.111 12.85 3.43 0.00 3.41
928 952 4.998672 CCCAATCAAATCAGCACACAAAAT 59.001 37.500 0.00 0.00 0.00 1.82
933 957 2.821969 AGACCCAATCAAATCAGCACAC 59.178 45.455 0.00 0.00 0.00 3.82
1366 1403 3.760684 AGGAACAAAATCATCACCTCTGC 59.239 43.478 0.00 0.00 0.00 4.26
1367 1404 5.587844 CCTAGGAACAAAATCATCACCTCTG 59.412 44.000 1.05 0.00 0.00 3.35
1368 1405 5.339530 CCCTAGGAACAAAATCATCACCTCT 60.340 44.000 11.48 0.00 0.00 3.69
1371 1408 4.600062 ACCCTAGGAACAAAATCATCACC 58.400 43.478 11.48 0.00 0.00 4.02
1372 1409 5.622233 GCAACCCTAGGAACAAAATCATCAC 60.622 44.000 11.48 0.00 0.00 3.06
1374 1411 4.142160 GGCAACCCTAGGAACAAAATCATC 60.142 45.833 11.48 0.00 0.00 2.92
1375 1412 3.769300 GGCAACCCTAGGAACAAAATCAT 59.231 43.478 11.48 0.00 0.00 2.45
1376 1413 3.161866 GGCAACCCTAGGAACAAAATCA 58.838 45.455 11.48 0.00 0.00 2.57
1377 1414 3.431415 AGGCAACCCTAGGAACAAAATC 58.569 45.455 11.48 0.00 40.58 2.17
1431 1476 6.938596 ACTTAGTAACCATTGTAGTCCCAAAC 59.061 38.462 0.00 0.00 0.00 2.93
1452 1497 8.676401 CACAACATCAAACCATCATCATACTTA 58.324 33.333 0.00 0.00 0.00 2.24
1476 1521 3.853671 CAGTGCACTGAAAAACTTGACAC 59.146 43.478 38.12 0.00 46.59 3.67
1480 1525 4.500477 GCTTACAGTGCACTGAAAAACTTG 59.500 41.667 44.82 26.68 46.59 3.16
1515 1560 7.094162 CCACCATGAACTAGTATACTCGATGAT 60.094 40.741 9.12 0.00 0.00 2.45
1517 1562 6.382608 CCACCATGAACTAGTATACTCGATG 58.617 44.000 9.12 3.46 0.00 3.84
1526 1571 0.828022 CCCGCCACCATGAACTAGTA 59.172 55.000 0.00 0.00 0.00 1.82
1527 1572 0.907704 TCCCGCCACCATGAACTAGT 60.908 55.000 0.00 0.00 0.00 2.57
1528 1573 0.251916 TTCCCGCCACCATGAACTAG 59.748 55.000 0.00 0.00 0.00 2.57
1560 1605 6.899243 CGACATCAAACCAAACAAAAATCAAC 59.101 34.615 0.00 0.00 0.00 3.18
1567 1612 3.429547 CCACCGACATCAAACCAAACAAA 60.430 43.478 0.00 0.00 0.00 2.83
1573 1618 0.762418 ACTCCACCGACATCAAACCA 59.238 50.000 0.00 0.00 0.00 3.67
1600 1645 2.231964 AGAAACCGTCGCCTACATACAA 59.768 45.455 0.00 0.00 0.00 2.41
1601 1646 1.820519 AGAAACCGTCGCCTACATACA 59.179 47.619 0.00 0.00 0.00 2.29
1631 1676 1.960689 GGCAAAAGAAACAGCCACCTA 59.039 47.619 0.00 0.00 46.26 3.08
1676 1721 0.319211 CTTTGTCGGCGACCACTACA 60.319 55.000 34.28 14.97 0.00 2.74
1681 1726 2.280524 CACCTTTGTCGGCGACCA 60.281 61.111 34.28 23.33 0.00 4.02
1786 1832 4.096984 ACCTACGTACTAAATCAGAACCCG 59.903 45.833 0.00 0.00 0.00 5.28
1788 1834 6.199937 TCACCTACGTACTAAATCAGAACC 57.800 41.667 0.00 0.00 0.00 3.62
1791 1837 5.889853 ACCATCACCTACGTACTAAATCAGA 59.110 40.000 0.00 0.00 0.00 3.27
1809 2054 6.039941 CACCTACAACTTACCAAAAACCATCA 59.960 38.462 0.00 0.00 0.00 3.07
1812 2057 5.262804 ACACCTACAACTTACCAAAAACCA 58.737 37.500 0.00 0.00 0.00 3.67
1846 2091 2.951229 GGTTCAACCCCTTTCAGAGA 57.049 50.000 0.00 0.00 30.04 3.10
1864 2109 4.511454 CCATACGACATATGTCTTGTTGGG 59.489 45.833 28.51 19.94 42.66 4.12
1867 2112 5.116180 CACCCATACGACATATGTCTTGTT 58.884 41.667 28.51 15.06 42.66 2.83
1869 2114 4.058124 CCACCCATACGACATATGTCTTG 58.942 47.826 28.51 22.08 42.66 3.02
1870 2115 3.494398 GCCACCCATACGACATATGTCTT 60.494 47.826 28.51 23.29 42.66 3.01
1872 2117 2.413837 GCCACCCATACGACATATGTC 58.586 52.381 23.47 23.47 39.36 3.06
1873 2118 1.071699 GGCCACCCATACGACATATGT 59.928 52.381 8.43 8.43 39.36 2.29
1874 2119 1.808411 GGCCACCCATACGACATATG 58.192 55.000 0.00 0.00 40.52 1.78
1875 2120 0.320374 CGGCCACCCATACGACATAT 59.680 55.000 2.24 0.00 0.00 1.78
1876 2121 0.756070 TCGGCCACCCATACGACATA 60.756 55.000 2.24 0.00 0.00 2.29
1932 2177 4.567747 CCAAACAGGGCACTAAAGTCCTAT 60.568 45.833 0.00 0.00 0.00 2.57
2022 2267 6.488769 AGATAACCATAATACCGACCAACA 57.511 37.500 0.00 0.00 0.00 3.33
2055 2300 1.126079 CGGTGTCGTATATCGTTGCC 58.874 55.000 0.00 0.00 40.80 4.52
2113 2358 7.175104 ACAAATCCACTACCAATTGTATGACT 58.825 34.615 4.43 0.00 29.89 3.41
2119 2364 3.756434 CCGACAAATCCACTACCAATTGT 59.244 43.478 4.43 0.00 34.01 2.71
2137 2382 3.181774 CGGATCAACATATCGAAACCGAC 59.818 47.826 0.00 0.00 39.04 4.79
2158 2404 1.324736 GGAGCGCAAAGACAATACTCG 59.675 52.381 11.47 0.00 0.00 4.18
2223 2469 1.402968 AGCGGTGTCGTATATCGTTGT 59.597 47.619 0.00 0.00 40.80 3.32
2293 2539 4.403734 ACCGAAACCAACAAATCCACTAT 58.596 39.130 0.00 0.00 0.00 2.12
2306 2552 4.062293 CTCAGAACAACATACCGAAACCA 58.938 43.478 0.00 0.00 0.00 3.67
2341 2628 6.380190 AGGACTTATAAACGCGAGCTTATAG 58.620 40.000 15.93 12.14 36.37 1.31
2351 2638 6.292008 CGTAGGCTTTTAGGACTTATAAACGC 60.292 42.308 0.00 0.00 36.92 4.84
2361 2648 4.802563 GTCACATACGTAGGCTTTTAGGAC 59.197 45.833 7.23 1.02 0.00 3.85
2372 2659 4.806330 ACCAGAAACTGTCACATACGTAG 58.194 43.478 0.08 0.00 0.00 3.51
2393 2680 7.277760 AGTCAAGAACAAGCAACCAAAAATTAC 59.722 33.333 0.00 0.00 0.00 1.89
2396 2683 5.581874 CAGTCAAGAACAAGCAACCAAAAAT 59.418 36.000 0.00 0.00 0.00 1.82
2424 2711 9.398170 CAATTGCGCACTAAATAATTTATAGCT 57.602 29.630 11.12 0.00 0.00 3.32
2435 2722 4.111916 GCCATAACAATTGCGCACTAAAT 58.888 39.130 11.12 0.00 0.00 1.40
2446 2733 2.917933 TCTAGCAGCGCCATAACAATT 58.082 42.857 2.29 0.00 0.00 2.32
2614 2904 0.741221 GTCGCTTGCTTAGGGGTCAG 60.741 60.000 4.21 0.00 37.41 3.51
3104 3403 0.257039 ATTCTCCATCGCAAGCCCTT 59.743 50.000 0.00 0.00 37.18 3.95
3414 3713 3.296709 ATCAAGCTTCCGCCGTCGT 62.297 57.895 0.00 0.00 36.60 4.34
3529 3832 3.023949 GCCATCACCGGTCAGCTCT 62.024 63.158 2.59 0.00 0.00 4.09
4143 6836 3.490761 GCAGCGCCATAACAATTTGGTAT 60.491 43.478 2.29 0.95 35.34 2.73
4144 6837 2.159310 GCAGCGCCATAACAATTTGGTA 60.159 45.455 2.29 0.00 35.34 3.25
4145 6838 1.404047 GCAGCGCCATAACAATTTGGT 60.404 47.619 2.29 0.00 35.34 3.67
4146 6839 1.135024 AGCAGCGCCATAACAATTTGG 60.135 47.619 2.29 0.00 36.03 3.28
4147 6840 2.282701 AGCAGCGCCATAACAATTTG 57.717 45.000 2.29 0.00 0.00 2.32
4148 6841 3.278574 TCTAGCAGCGCCATAACAATTT 58.721 40.909 2.29 0.00 0.00 1.82
4149 6842 2.917933 TCTAGCAGCGCCATAACAATT 58.082 42.857 2.29 0.00 0.00 2.32
4150 6843 2.620251 TCTAGCAGCGCCATAACAAT 57.380 45.000 2.29 0.00 0.00 2.71
4151 6844 2.279741 CTTCTAGCAGCGCCATAACAA 58.720 47.619 2.29 0.00 0.00 2.83
4152 6845 1.473257 CCTTCTAGCAGCGCCATAACA 60.473 52.381 2.29 0.00 0.00 2.41
4153 6846 1.202533 TCCTTCTAGCAGCGCCATAAC 60.203 52.381 2.29 0.00 0.00 1.89
4154 6847 1.069204 CTCCTTCTAGCAGCGCCATAA 59.931 52.381 2.29 0.00 0.00 1.90
4155 6848 0.676184 CTCCTTCTAGCAGCGCCATA 59.324 55.000 2.29 0.00 0.00 2.74
4156 6849 1.445095 CTCCTTCTAGCAGCGCCAT 59.555 57.895 2.29 0.00 0.00 4.40
4157 6850 2.725312 CCTCCTTCTAGCAGCGCCA 61.725 63.158 2.29 0.00 0.00 5.69
4158 6851 2.107953 CCTCCTTCTAGCAGCGCC 59.892 66.667 2.29 0.00 0.00 6.53
4400 7094 2.636647 TGCATATTCCGCTGAATCCA 57.363 45.000 6.64 1.38 41.44 3.41
4410 7104 4.271533 TCGTAACCGACAAATGCATATTCC 59.728 41.667 0.00 0.00 38.40 3.01
4425 7131 2.479049 CCACACCAGACTATCGTAACCG 60.479 54.545 0.00 0.00 0.00 4.44
4430 7136 3.192844 CAGTAACCACACCAGACTATCGT 59.807 47.826 0.00 0.00 0.00 3.73
4431 7137 3.770666 CAGTAACCACACCAGACTATCG 58.229 50.000 0.00 0.00 0.00 2.92
4445 7153 5.977489 AATAGAAACAAAGGGCAGTAACC 57.023 39.130 0.00 0.00 0.00 2.85
4453 7161 7.761038 AGAAACCAGTAATAGAAACAAAGGG 57.239 36.000 0.00 0.00 0.00 3.95
4623 7331 8.511604 ACAAGCTAAACATACTCATAGCATTT 57.488 30.769 6.43 0.00 42.45 2.32
4678 7386 7.930865 ACACAACAATAATTGCCTAAACAACAT 59.069 29.630 0.00 0.00 32.47 2.71
4725 7433 8.669243 ACGCTAAAGAAAAGAATGGAATAGAAG 58.331 33.333 0.00 0.00 0.00 2.85
4726 7434 8.561738 ACGCTAAAGAAAAGAATGGAATAGAA 57.438 30.769 0.00 0.00 0.00 2.10
4727 7435 9.832445 ATACGCTAAAGAAAAGAATGGAATAGA 57.168 29.630 0.00 0.00 0.00 1.98
4729 7437 9.832445 AGATACGCTAAAGAAAAGAATGGAATA 57.168 29.630 0.00 0.00 0.00 1.75
4730 7438 8.616076 CAGATACGCTAAAGAAAAGAATGGAAT 58.384 33.333 0.00 0.00 0.00 3.01
4731 7439 7.822334 TCAGATACGCTAAAGAAAAGAATGGAA 59.178 33.333 0.00 0.00 0.00 3.53
4732 7440 7.327975 TCAGATACGCTAAAGAAAAGAATGGA 58.672 34.615 0.00 0.00 0.00 3.41
4733 7441 7.539712 TCAGATACGCTAAAGAAAAGAATGG 57.460 36.000 0.00 0.00 0.00 3.16
4734 7442 9.994432 AAATCAGATACGCTAAAGAAAAGAATG 57.006 29.630 0.00 0.00 0.00 2.67
4735 7443 9.994432 CAAATCAGATACGCTAAAGAAAAGAAT 57.006 29.630 0.00 0.00 0.00 2.40
4736 7444 8.450964 CCAAATCAGATACGCTAAAGAAAAGAA 58.549 33.333 0.00 0.00 0.00 2.52
4737 7445 7.606456 ACCAAATCAGATACGCTAAAGAAAAGA 59.394 33.333 0.00 0.00 0.00 2.52
4738 7446 7.752695 ACCAAATCAGATACGCTAAAGAAAAG 58.247 34.615 0.00 0.00 0.00 2.27
4739 7447 7.681939 ACCAAATCAGATACGCTAAAGAAAA 57.318 32.000 0.00 0.00 0.00 2.29
4740 7448 8.038944 AGTACCAAATCAGATACGCTAAAGAAA 58.961 33.333 0.00 0.00 0.00 2.52
4741 7449 7.491372 CAGTACCAAATCAGATACGCTAAAGAA 59.509 37.037 0.00 0.00 0.00 2.52
4742 7450 6.978659 CAGTACCAAATCAGATACGCTAAAGA 59.021 38.462 0.00 0.00 0.00 2.52
4743 7451 6.757010 ACAGTACCAAATCAGATACGCTAAAG 59.243 38.462 0.00 0.00 0.00 1.85
4744 7452 6.533723 CACAGTACCAAATCAGATACGCTAAA 59.466 38.462 0.00 0.00 0.00 1.85
4745 7453 6.040247 CACAGTACCAAATCAGATACGCTAA 58.960 40.000 0.00 0.00 0.00 3.09
4746 7454 5.358725 TCACAGTACCAAATCAGATACGCTA 59.641 40.000 0.00 0.00 0.00 4.26
4747 7455 4.159693 TCACAGTACCAAATCAGATACGCT 59.840 41.667 0.00 0.00 0.00 5.07
4748 7456 4.430007 TCACAGTACCAAATCAGATACGC 58.570 43.478 0.00 0.00 0.00 4.42
4749 7457 8.818141 ATTATCACAGTACCAAATCAGATACG 57.182 34.615 0.00 0.00 0.00 3.06
4752 7460 9.125026 GGAAATTATCACAGTACCAAATCAGAT 57.875 33.333 0.00 0.00 0.00 2.90
4753 7461 7.556275 GGGAAATTATCACAGTACCAAATCAGA 59.444 37.037 0.00 0.00 0.00 3.27
4754 7462 7.339212 TGGGAAATTATCACAGTACCAAATCAG 59.661 37.037 0.00 0.00 36.22 2.90
4767 7475 7.012894 TGACGTATGGAAATGGGAAATTATCAC 59.987 37.037 0.00 0.00 0.00 3.06
4777 7485 3.278574 ACACATGACGTATGGAAATGGG 58.721 45.455 0.00 0.00 41.25 4.00
4800 7508 6.206438 TGTCTGCAGTTAATATCACAAAAGCA 59.794 34.615 14.67 0.00 0.00 3.91
4821 7529 7.306013 TGGAGGGAGTACATATTTAGATGTCT 58.694 38.462 0.00 0.00 40.54 3.41
4832 7540 8.184249 AGTAATATGGAATGGAGGGAGTACATA 58.816 37.037 0.00 0.00 0.00 2.29
4838 7547 4.528596 ACGAGTAATATGGAATGGAGGGAG 59.471 45.833 0.00 0.00 0.00 4.30
4839 7548 4.489737 ACGAGTAATATGGAATGGAGGGA 58.510 43.478 0.00 0.00 0.00 4.20
4840 7549 4.618460 CGACGAGTAATATGGAATGGAGGG 60.618 50.000 0.00 0.00 0.00 4.30
4841 7550 4.486090 CGACGAGTAATATGGAATGGAGG 58.514 47.826 0.00 0.00 0.00 4.30
4842 7551 3.921021 GCGACGAGTAATATGGAATGGAG 59.079 47.826 0.00 0.00 0.00 3.86
4843 7552 3.572682 AGCGACGAGTAATATGGAATGGA 59.427 43.478 0.00 0.00 0.00 3.41
4844 7553 3.675225 CAGCGACGAGTAATATGGAATGG 59.325 47.826 0.00 0.00 0.00 3.16
4845 7554 4.546570 TCAGCGACGAGTAATATGGAATG 58.453 43.478 0.00 0.00 0.00 2.67
4846 7555 4.848562 TCAGCGACGAGTAATATGGAAT 57.151 40.909 0.00 0.00 0.00 3.01
4847 7556 4.848562 ATCAGCGACGAGTAATATGGAA 57.151 40.909 0.00 0.00 0.00 3.53
4848 7557 4.848562 AATCAGCGACGAGTAATATGGA 57.151 40.909 0.00 0.00 0.00 3.41
4849 7558 6.150318 ACTAAATCAGCGACGAGTAATATGG 58.850 40.000 0.00 0.00 0.00 2.74
4850 7559 7.801783 TGTACTAAATCAGCGACGAGTAATATG 59.198 37.037 0.00 0.00 0.00 1.78
4851 7560 7.868775 TGTACTAAATCAGCGACGAGTAATAT 58.131 34.615 0.00 0.00 0.00 1.28
4852 7561 7.250445 TGTACTAAATCAGCGACGAGTAATA 57.750 36.000 0.00 0.00 0.00 0.98
4853 7562 6.127810 TGTACTAAATCAGCGACGAGTAAT 57.872 37.500 0.00 0.00 0.00 1.89
4854 7563 5.550232 TGTACTAAATCAGCGACGAGTAA 57.450 39.130 0.00 0.00 0.00 2.24
4855 7564 5.122869 AGTTGTACTAAATCAGCGACGAGTA 59.877 40.000 0.00 0.00 0.00 2.59
4856 7565 4.082895 AGTTGTACTAAATCAGCGACGAGT 60.083 41.667 0.00 0.00 0.00 4.18
4857 7566 4.413087 AGTTGTACTAAATCAGCGACGAG 58.587 43.478 0.00 0.00 0.00 4.18
4858 7567 4.430137 AGTTGTACTAAATCAGCGACGA 57.570 40.909 0.00 0.00 0.00 4.20
4859 7568 4.201589 CCAAGTTGTACTAAATCAGCGACG 60.202 45.833 1.45 0.00 0.00 5.12
4860 7569 4.689345 ACCAAGTTGTACTAAATCAGCGAC 59.311 41.667 1.45 0.00 0.00 5.19
4861 7570 4.890088 ACCAAGTTGTACTAAATCAGCGA 58.110 39.130 1.45 0.00 0.00 4.93
4862 7571 6.091123 GTACCAAGTTGTACTAAATCAGCG 57.909 41.667 1.45 0.00 38.43 5.18
4872 7581 5.865552 TCGCTGATTTAGTACCAAGTTGTAC 59.134 40.000 1.45 5.04 41.13 2.90
4873 7582 5.865552 GTCGCTGATTTAGTACCAAGTTGTA 59.134 40.000 1.45 0.00 0.00 2.41
4874 7583 4.689345 GTCGCTGATTTAGTACCAAGTTGT 59.311 41.667 1.45 0.00 0.00 3.32
4875 7584 4.688879 TGTCGCTGATTTAGTACCAAGTTG 59.311 41.667 0.00 0.00 0.00 3.16
4876 7585 4.890088 TGTCGCTGATTTAGTACCAAGTT 58.110 39.130 0.00 0.00 0.00 2.66
4877 7586 4.530710 TGTCGCTGATTTAGTACCAAGT 57.469 40.909 0.00 0.00 0.00 3.16
4878 7587 4.929808 ACTTGTCGCTGATTTAGTACCAAG 59.070 41.667 0.00 0.00 34.90 3.61
4879 7588 4.890088 ACTTGTCGCTGATTTAGTACCAA 58.110 39.130 0.00 0.00 0.00 3.67
4880 7589 4.530710 ACTTGTCGCTGATTTAGTACCA 57.469 40.909 0.00 0.00 0.00 3.25
4881 7590 8.700644 CATATTACTTGTCGCTGATTTAGTACC 58.299 37.037 0.00 0.00 0.00 3.34
4882 7591 8.700644 CCATATTACTTGTCGCTGATTTAGTAC 58.299 37.037 0.00 0.00 0.00 2.73
4883 7592 8.635328 TCCATATTACTTGTCGCTGATTTAGTA 58.365 33.333 0.00 0.00 0.00 1.82
4884 7593 7.497595 TCCATATTACTTGTCGCTGATTTAGT 58.502 34.615 0.00 0.00 0.00 2.24
4885 7594 7.946655 TCCATATTACTTGTCGCTGATTTAG 57.053 36.000 0.00 0.00 0.00 1.85
4886 7595 7.766738 TGTTCCATATTACTTGTCGCTGATTTA 59.233 33.333 0.00 0.00 0.00 1.40
4887 7596 6.597672 TGTTCCATATTACTTGTCGCTGATTT 59.402 34.615 0.00 0.00 0.00 2.17
4888 7597 6.112734 TGTTCCATATTACTTGTCGCTGATT 58.887 36.000 0.00 0.00 0.00 2.57
4889 7598 5.670485 TGTTCCATATTACTTGTCGCTGAT 58.330 37.500 0.00 0.00 0.00 2.90
4890 7599 5.079689 TGTTCCATATTACTTGTCGCTGA 57.920 39.130 0.00 0.00 0.00 4.26
4891 7600 5.109210 TCTGTTCCATATTACTTGTCGCTG 58.891 41.667 0.00 0.00 0.00 5.18
4892 7601 5.339008 TCTGTTCCATATTACTTGTCGCT 57.661 39.130 0.00 0.00 0.00 4.93
4893 7602 4.508124 CCTCTGTTCCATATTACTTGTCGC 59.492 45.833 0.00 0.00 0.00 5.19
4894 7603 5.050490 CCCTCTGTTCCATATTACTTGTCG 58.950 45.833 0.00 0.00 0.00 4.35
4895 7604 6.127026 ACTCCCTCTGTTCCATATTACTTGTC 60.127 42.308 0.00 0.00 0.00 3.18
4896 7605 5.726793 ACTCCCTCTGTTCCATATTACTTGT 59.273 40.000 0.00 0.00 0.00 3.16
4897 7606 6.240549 ACTCCCTCTGTTCCATATTACTTG 57.759 41.667 0.00 0.00 0.00 3.16
4898 7607 7.363031 TCTACTCCCTCTGTTCCATATTACTT 58.637 38.462 0.00 0.00 0.00 2.24
4899 7608 6.923670 TCTACTCCCTCTGTTCCATATTACT 58.076 40.000 0.00 0.00 0.00 2.24
4900 7609 7.288158 ACTTCTACTCCCTCTGTTCCATATTAC 59.712 40.741 0.00 0.00 0.00 1.89
4901 7610 7.363031 ACTTCTACTCCCTCTGTTCCATATTA 58.637 38.462 0.00 0.00 0.00 0.98
4902 7611 6.206042 ACTTCTACTCCCTCTGTTCCATATT 58.794 40.000 0.00 0.00 0.00 1.28
4903 7612 5.782925 ACTTCTACTCCCTCTGTTCCATAT 58.217 41.667 0.00 0.00 0.00 1.78
4904 7613 5.208294 ACTTCTACTCCCTCTGTTCCATA 57.792 43.478 0.00 0.00 0.00 2.74
4905 7614 4.067944 ACTTCTACTCCCTCTGTTCCAT 57.932 45.455 0.00 0.00 0.00 3.41
4906 7615 3.544698 ACTTCTACTCCCTCTGTTCCA 57.455 47.619 0.00 0.00 0.00 3.53
4907 7616 4.570930 CAAACTTCTACTCCCTCTGTTCC 58.429 47.826 0.00 0.00 0.00 3.62
4908 7617 3.997681 GCAAACTTCTACTCCCTCTGTTC 59.002 47.826 0.00 0.00 0.00 3.18
4909 7618 3.648545 AGCAAACTTCTACTCCCTCTGTT 59.351 43.478 0.00 0.00 0.00 3.16
4910 7619 3.243724 AGCAAACTTCTACTCCCTCTGT 58.756 45.455 0.00 0.00 0.00 3.41
4911 7620 3.971245 AGCAAACTTCTACTCCCTCTG 57.029 47.619 0.00 0.00 0.00 3.35
4912 7621 3.558109 GCAAGCAAACTTCTACTCCCTCT 60.558 47.826 0.00 0.00 32.29 3.69
4913 7622 2.744741 GCAAGCAAACTTCTACTCCCTC 59.255 50.000 0.00 0.00 32.29 4.30
4914 7623 2.373502 AGCAAGCAAACTTCTACTCCCT 59.626 45.455 0.00 0.00 32.29 4.20
4915 7624 2.784347 AGCAAGCAAACTTCTACTCCC 58.216 47.619 0.00 0.00 32.29 4.30
4916 7625 3.189495 GGAAGCAAGCAAACTTCTACTCC 59.811 47.826 11.03 0.00 41.64 3.85
4917 7626 3.815401 TGGAAGCAAGCAAACTTCTACTC 59.185 43.478 11.03 0.00 41.64 2.59
4918 7627 3.565902 GTGGAAGCAAGCAAACTTCTACT 59.434 43.478 16.51 0.00 45.59 2.57
4919 7628 3.890128 GTGGAAGCAAGCAAACTTCTAC 58.110 45.455 11.39 11.39 43.88 2.59
4920 7629 3.550820 TGTGGAAGCAAGCAAACTTCTA 58.449 40.909 11.03 4.20 41.64 2.10
4921 7630 2.360165 CTGTGGAAGCAAGCAAACTTCT 59.640 45.455 11.03 0.00 41.64 2.85
5205 7917 4.282068 CAACAGAGAACGAAATGTTGGTG 58.718 43.478 8.63 0.57 45.49 4.17
5235 7947 7.992608 TGCAGAGAGGCATTGTTAGATTATAAA 59.007 33.333 0.00 0.00 39.25 1.40
5432 8144 6.813152 CGCCATTTCTTTTTCTTTATCATGGT 59.187 34.615 0.00 0.00 32.70 3.55
5504 8216 5.591877 AGCATCATAAAACCTTCACTCATCC 59.408 40.000 0.00 0.00 0.00 3.51
5646 8358 4.767578 AGATTCTGGAAGCAATGCTCTA 57.232 40.909 8.71 0.00 38.25 2.43
5706 8418 2.325484 TGGTGAGGAGCTGACAAGTAA 58.675 47.619 0.00 0.00 0.00 2.24
5730 8442 2.223377 CCACTTGCGTTCAACTAACTCC 59.777 50.000 0.00 0.00 35.81 3.85
5754 8466 1.148310 CAGTAAAGTGTGTGCTCCCG 58.852 55.000 0.00 0.00 0.00 5.14
5775 8487 3.369997 GGATCCTCTTTTTCGCCTCTTCT 60.370 47.826 3.84 0.00 0.00 2.85
5871 8583 3.589951 ACCTCATGATGGAAGAATGGG 57.410 47.619 15.51 3.94 0.00 4.00
5883 8595 1.601903 GCACGTTTCACAACCTCATGA 59.398 47.619 0.00 0.00 0.00 3.07
5973 8685 5.559770 TGATTAGAACTGATCAAACAGCCA 58.440 37.500 6.78 0.00 41.06 4.75
5976 8688 8.092521 ACACTTGATTAGAACTGATCAAACAG 57.907 34.615 17.90 11.71 42.45 3.16
6123 8835 1.745653 GGGGCAGCAGATTTACAGAAC 59.254 52.381 0.00 0.00 0.00 3.01
6170 8882 9.264719 CTTCTTTAAAATGCTTCACCTTTTCAT 57.735 29.630 0.00 0.00 0.00 2.57
6561 9273 3.248602 CAGTTTGACTACCACTGCTGTTC 59.751 47.826 0.00 0.00 31.99 3.18
6699 9411 2.037251 GCCTGTGTTGTACTCCTCAAGA 59.963 50.000 0.00 0.00 0.00 3.02
6863 9575 0.035458 GATGGTTATCAGCCCCTCGG 59.965 60.000 0.00 0.00 33.38 4.63
6906 9618 3.311110 AGGCCTTCCTTGACGCGA 61.311 61.111 15.93 0.00 40.66 5.87
6924 9636 1.030488 TGTCGAGGGTCAGATCGTCC 61.030 60.000 0.00 0.00 39.86 4.79
6948 9660 1.221466 TGAACTTCTCCTGCGCGTTG 61.221 55.000 8.43 0.00 0.00 4.10
7009 9721 2.660064 GCAGGGAGGCGAAGGAAGA 61.660 63.158 0.00 0.00 0.00 2.87
7040 9752 2.291540 CCAAGTTTAGCCATCTGGGGAA 60.292 50.000 0.00 0.00 37.04 3.97
7041 9753 1.284785 CCAAGTTTAGCCATCTGGGGA 59.715 52.381 0.00 0.00 37.04 4.81
7043 9755 2.806945 TCCAAGTTTAGCCATCTGGG 57.193 50.000 0.00 0.00 40.85 4.45
7044 9756 3.955471 TCTTCCAAGTTTAGCCATCTGG 58.045 45.455 0.00 0.00 38.53 3.86
7049 9761 5.887754 AGGTATTTCTTCCAAGTTTAGCCA 58.112 37.500 0.00 0.00 0.00 4.75
7056 9768 9.440761 AGATATACAGAGGTATTTCTTCCAAGT 57.559 33.333 0.00 0.00 42.17 3.16
7063 9775 9.091220 GGGTGTAAGATATACAGAGGTATTTCT 57.909 37.037 0.00 0.00 44.81 2.52
7064 9776 8.867097 TGGGTGTAAGATATACAGAGGTATTTC 58.133 37.037 0.00 0.00 40.61 2.17
7145 9866 4.282703 ACACTCCGGTATACCATACCATTC 59.717 45.833 21.76 0.00 37.44 2.67
7270 9991 7.870445 ACAACAAGTAACTTCAAAAGCAGAAAA 59.130 29.630 0.00 0.00 0.00 2.29
7288 10009 2.973694 ACTACACGTCCACAACAAGT 57.026 45.000 0.00 0.00 0.00 3.16
7329 10050 1.139853 CTCACCTTGGACAGCCCTATC 59.860 57.143 0.00 0.00 35.38 2.08
7336 10057 0.325933 TGCCATCTCACCTTGGACAG 59.674 55.000 0.00 0.00 34.81 3.51
7368 10089 4.160642 TCCGTATTGTGAGCTACTCCTA 57.839 45.455 0.00 0.00 0.00 2.94
7369 10090 3.014304 TCCGTATTGTGAGCTACTCCT 57.986 47.619 0.00 0.00 0.00 3.69
7370 10091 3.130693 ACTTCCGTATTGTGAGCTACTCC 59.869 47.826 0.00 0.00 0.00 3.85
7392 10113 2.102109 TTGTGAGCCTTCCGCGGTAA 62.102 55.000 27.15 16.74 44.76 2.85
7405 10126 6.382869 AAAGGAAAACAGATGAGTTGTGAG 57.617 37.500 0.00 0.00 0.00 3.51
7408 10129 6.378280 ACAGAAAAGGAAAACAGATGAGTTGT 59.622 34.615 0.00 0.00 0.00 3.32
7410 10131 7.340487 AGAACAGAAAAGGAAAACAGATGAGTT 59.660 33.333 0.00 0.00 0.00 3.01
7411 10132 6.830838 AGAACAGAAAAGGAAAACAGATGAGT 59.169 34.615 0.00 0.00 0.00 3.41
7453 10449 1.865970 GAGAGATGATGGCGCTCTTTG 59.134 52.381 7.64 0.00 39.00 2.77
7456 10452 1.117994 TTGAGAGATGATGGCGCTCT 58.882 50.000 7.64 0.35 41.42 4.09
7479 10475 1.067516 CCGCCAAAGATTAATGGGCTG 59.932 52.381 12.51 5.32 42.43 4.85
7486 10482 0.606944 ACGGTGCCGCCAAAGATTAA 60.607 50.000 10.87 0.00 44.19 1.40
7504 10500 3.163467 AGGGAGTAGATTATACCCGCAC 58.837 50.000 0.00 0.00 44.57 5.34
7505 10501 3.537795 AGGGAGTAGATTATACCCGCA 57.462 47.619 0.00 0.00 44.57 5.69
7526 10522 7.788026 ACAAACACTCTTATATTATGGGACGA 58.212 34.615 0.00 0.00 0.00 4.20
7539 10545 7.431249 CACCTGAGTAGTAACAAACACTCTTA 58.569 38.462 0.00 0.00 37.25 2.10
7540 10546 6.281405 CACCTGAGTAGTAACAAACACTCTT 58.719 40.000 0.00 0.00 37.25 2.85
7542 10548 4.989168 CCACCTGAGTAGTAACAAACACTC 59.011 45.833 0.00 0.00 37.06 3.51
7543 10549 4.652421 TCCACCTGAGTAGTAACAAACACT 59.348 41.667 0.00 0.00 0.00 3.55
7546 10552 4.562963 CCCTCCACCTGAGTAGTAACAAAC 60.563 50.000 0.00 0.00 39.65 2.93
7550 10556 2.108970 CCCCTCCACCTGAGTAGTAAC 58.891 57.143 0.00 0.00 39.65 2.50
7551 10557 1.720533 ACCCCTCCACCTGAGTAGTAA 59.279 52.381 0.00 0.00 39.65 2.24
7552 10558 1.390287 ACCCCTCCACCTGAGTAGTA 58.610 55.000 0.00 0.00 39.65 1.82
7560 10566 5.230746 TCTAATTAACTACCCCTCCACCT 57.769 43.478 0.00 0.00 0.00 4.00
7562 10568 6.556974 AGTTCTAATTAACTACCCCTCCAC 57.443 41.667 0.00 0.00 37.93 4.02
7674 10681 1.265635 CGAGTATTCCGCTGGAGAGAG 59.734 57.143 0.00 0.00 31.21 3.20
7675 10682 1.309950 CGAGTATTCCGCTGGAGAGA 58.690 55.000 0.00 0.00 31.21 3.10
7676 10683 1.025812 ACGAGTATTCCGCTGGAGAG 58.974 55.000 0.00 0.00 31.21 3.20
7739 11241 6.127338 TGGGCAATAACTATCTATCGATCTGG 60.127 42.308 0.00 0.00 0.00 3.86
7768 11270 3.312828 GCATCACGTGTATTGCCAAAAA 58.687 40.909 21.78 0.00 0.00 1.94
7812 11314 6.024552 AGAAAACAACAAACACATCACACT 57.975 33.333 0.00 0.00 0.00 3.55
7859 11361 2.754472 TGGATCACGTTGTCACAGAAG 58.246 47.619 0.00 0.00 0.00 2.85
7861 11363 2.298729 TGATGGATCACGTTGTCACAGA 59.701 45.455 0.00 0.00 0.00 3.41
7868 11370 1.131126 GTTGCCTGATGGATCACGTTG 59.869 52.381 0.00 0.00 34.57 4.10
7890 11392 4.681781 CGCCTCACTTGGTCAGAAATCTAT 60.682 45.833 0.00 0.00 0.00 1.98
7892 11394 2.613977 CGCCTCACTTGGTCAGAAATCT 60.614 50.000 0.00 0.00 0.00 2.40
7913 11415 2.103263 ACGCTCCCTTGGATGACTATTC 59.897 50.000 0.00 0.00 0.00 1.75
7985 11487 3.190874 GGTAGAAGAACATGAGCGGAAG 58.809 50.000 0.00 0.00 0.00 3.46
7986 11488 2.093658 GGGTAGAAGAACATGAGCGGAA 60.094 50.000 0.00 0.00 0.00 4.30
7987 11489 1.480954 GGGTAGAAGAACATGAGCGGA 59.519 52.381 0.00 0.00 0.00 5.54
7988 11490 1.473434 GGGGTAGAAGAACATGAGCGG 60.473 57.143 0.00 0.00 0.00 5.52
7989 11491 1.802880 CGGGGTAGAAGAACATGAGCG 60.803 57.143 0.00 0.00 0.00 5.03
7990 11492 1.473434 CCGGGGTAGAAGAACATGAGC 60.473 57.143 0.00 0.00 0.00 4.26
7991 11493 1.473434 GCCGGGGTAGAAGAACATGAG 60.473 57.143 2.18 0.00 0.00 2.90
7992 11494 0.539986 GCCGGGGTAGAAGAACATGA 59.460 55.000 2.18 0.00 0.00 3.07
7993 11495 0.541863 AGCCGGGGTAGAAGAACATG 59.458 55.000 2.18 0.00 0.00 3.21
7994 11496 0.541863 CAGCCGGGGTAGAAGAACAT 59.458 55.000 2.18 0.00 0.00 2.71
7995 11497 1.550130 CCAGCCGGGGTAGAAGAACA 61.550 60.000 2.18 0.00 0.00 3.18
7996 11498 1.221021 CCAGCCGGGGTAGAAGAAC 59.779 63.158 2.18 0.00 0.00 3.01
7997 11499 2.666098 GCCAGCCGGGGTAGAAGAA 61.666 63.158 2.18 0.00 37.04 2.52
7998 11500 3.081409 GCCAGCCGGGGTAGAAGA 61.081 66.667 2.18 0.00 37.04 2.87
8005 11507 0.759346 GGATATATAGCCAGCCGGGG 59.241 60.000 12.25 0.00 37.04 5.73
8006 11508 0.389391 CGGATATATAGCCAGCCGGG 59.611 60.000 16.97 0.00 40.85 5.73
8007 11509 1.112113 ACGGATATATAGCCAGCCGG 58.888 55.000 16.97 0.00 42.76 6.13
8008 11510 1.476891 ACACGGATATATAGCCAGCCG 59.523 52.381 16.97 8.03 43.95 5.52
8009 11511 2.233922 ACACACGGATATATAGCCAGCC 59.766 50.000 16.97 0.00 0.00 4.85
8010 11512 3.594603 ACACACGGATATATAGCCAGC 57.405 47.619 16.97 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.