AutoCloner

Multiple sequence alignment - TraesCS2A01G320700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G320700	chr2A	100.000	4649	0	0	1	4649	550531148	550535796	0.000000e+00	8586.0
1	TraesCS2A01G320700	chr2A	89.552	134	8	4	4226	4354	622697342	622697474	1.030000e-36	165.0
2	TraesCS2A01G320700	chr2A	96.491	57	2	0	1	57	662978824	662978880	1.380000e-15	95.3
3	TraesCS2A01G320700	chr2A	95.000	60	3	0	1	60	663311673	663311614	1.380000e-15	95.3
4	TraesCS2A01G320700	chr2D	91.402	3908	197	60	199	4038	436360931	436364767	0.000000e+00	5227.0
5	TraesCS2A01G320700	chr2D	89.231	130	13	1	4226	4354	644149798	644149927	1.340000e-35	161.0
6	TraesCS2A01G320700	chr2D	83.537	164	16	9	4048	4209	524567967	524568121	4.850000e-30	143.0
7	TraesCS2A01G320700	chr2B	93.629	2480	93	30	66	2491	514886030	514883562	0.000000e+00	3644.0
8	TraesCS2A01G320700	chr2B	95.504	1557	45	12	2487	4033	514883327	514881786	0.000000e+00	2464.0
9	TraesCS2A01G320700	chr2B	83.333	162	18	2	4048	4209	56520330	56520178	1.740000e-29	141.0
10	TraesCS2A01G320700	chr6A	90.909	132	9	1	4226	4354	5939082	5939213	1.720000e-39	174.0
11	TraesCS2A01G320700	chr6A	84.568	162	17	5	4048	4209	73573753	73573906	2.240000e-33	154.0
12	TraesCS2A01G320700	chr4D	89.552	134	11	1	4226	4356	6660886	6660753	2.880000e-37	167.0
13	TraesCS2A01G320700	chr4D	84.146	164	15	5	4048	4209	463059928	463059774	1.040000e-31	148.0
14	TraesCS2A01G320700	chr5D	89.394	132	11	1	4226	4354	384072353	384072222	3.720000e-36	163.0
15	TraesCS2A01G320700	chr5D	82.927	164	17	5	4048	4209	79681243	79681089	2.260000e-28	137.0
16	TraesCS2A01G320700	chr7B	89.394	132	9	3	4226	4353	663743571	663743441	1.340000e-35	161.0
17	TraesCS2A01G320700	chr5B	89.231	130	13	1	4226	4354	417443930	417444059	1.340000e-35	161.0
18	TraesCS2A01G320700	chr5B	96.491	57	2	0	1	57	483018112	483018056	1.380000e-15	95.3
19	TraesCS2A01G320700	chrUn	85.455	165	10	6	4226	4378	85304301	85304463	4.810000e-35	159.0
20	TraesCS2A01G320700	chrUn	96.429	56	2	0	1	56	328104560	328104505	4.950000e-15	93.5
21	TraesCS2A01G320700	chr3B	85.276	163	15	3	4048	4209	651729623	651729469	4.810000e-35	159.0
22	TraesCS2A01G320700	chr7A	88.722	133	10	3	4226	4354	323448437	323448568	1.730000e-34	158.0
23	TraesCS2A01G320700	chr1B	84.568	162	17	3	4048	4209	592305167	592305014	2.240000e-33	154.0
24	TraesCS2A01G320700	chr1B	84.568	162	17	3	4048	4209	592346982	592346829	2.240000e-33	154.0
25	TraesCS2A01G320700	chr7D	83.951	162	18	2	4048	4209	94439083	94439236	1.040000e-31	148.0
26	TraesCS2A01G320700	chr3A	83.951	162	18	3	4048	4209	586886917	586886764	1.040000e-31	148.0
27	TraesCS2A01G320700	chr3A	100.000	56	0	0	1	56	600669289	600669344	2.290000e-18	104.0
28	TraesCS2A01G320700	chr1D	83.333	162	19	2	4048	4209	332216318	332216471	4.850000e-30	143.0
29	TraesCS2A01G320700	chr1D	82.209	163	19	5	4048	4209	202956134	202955981	1.050000e-26	132.0
30	TraesCS2A01G320700	chr3D	78.390	236	35	11	4048	4275	546474105	546474332	6.270000e-29	139.0
31	TraesCS2A01G320700	chr3D	93.333	60	4	0	1	60	15998278	15998219	6.410000e-14	89.8
32	TraesCS2A01G320700	chr6D	81.006	179	20	8	4030	4204	356024266	356024098	3.780000e-26	130.0
33	TraesCS2A01G320700	chr4B	82.639	144	17	4	4066	4209	65620727	65620592	2.270000e-23	121.0
34	TraesCS2A01G320700	chr4A	95.238	63	2	1	1	63	69309879	69309818	1.060000e-16	99.0
35	TraesCS2A01G320700	chr4A	96.491	57	2	0	1	57	162080311	162080255	1.380000e-15	95.3
36	TraesCS2A01G320700	chr1A	96.429	56	2	0	1	56	539711234	539711179	4.950000e-15	93.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G320700	chr2A	550531148	550535796	4648	False	8586	8586	100.0000	1	4649	1	chr2A.!!$F1	4648
1	TraesCS2A01G320700	chr2D	436360931	436364767	3836	False	5227	5227	91.4020	199	4038	1	chr2D.!!$F1	3839
2	TraesCS2A01G320700	chr2B	514881786	514886030	4244	True	3054	3644	94.5665	66	4033	2	chr2B.!!$R2	3967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
57	58	0.561184	ATGGGATCGGAGGGAGTACA	59.439	55.000	0.00	0.00	2.90	F
874	923	0.662374	CTTTCTTGCGCTGTTGCCTG	60.662	55.000	9.73	35.36	4.85	F
1413	1466	1.135575	GCAAATGGCAAGTTCTCGGAG	60.136	52.381	0.00	43.97	4.63	F
1875	1928	1.909700	TTGCCCTGCCACTTAAAGAG	58.090	50.000	0.00	0.00	2.85	F
2438	2496	1.680735	TGTGCATCACAAGGGTGTTTC	59.319	47.619	0.00	45.45	2.78	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1020	1073	0.959372	CTGTCTTCTTGGGCAGCCTG	60.959	60.000	12.43	2.21	0.00	4.85	R
2385	2443	0.899720	ACATCCAAGGCATGCAAAGG	59.100	50.000	21.36	16.84	0.00	3.11	R
2412	2470	1.085091	CCTTGTGATGCACAGAGAGC	58.915	55.000	0.00	0.00	45.39	4.09	R
3324	3669	3.498397	CGTTGTTCCATAGAAACAGTGCT	59.502	43.478	0.00	0.00	32.58	4.40	R
4378	4727	0.103208	ATCGAACGTGCCTGAGGATC	59.897	55.000	0.65	0.00	0.00	3.36	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
43	44	8.514330	AAAAATTATACGCAGACTAAATGGGA	57.486	30.769	0.00	0.00	34.87	4.37
44	45	8.691661	AAAATTATACGCAGACTAAATGGGAT	57.308	30.769	0.00	0.00	34.87	3.85
45	46	7.907214	AATTATACGCAGACTAAATGGGATC	57.093	36.000	0.00	0.00	34.87	3.36
46	47	2.225068	ACGCAGACTAAATGGGATCG	57.775	50.000	0.00	0.00	34.87	3.69
47	48	1.202533	ACGCAGACTAAATGGGATCGG	60.203	52.381	0.00	0.00	34.87	4.18
48	49	1.068588	CGCAGACTAAATGGGATCGGA	59.931	52.381	0.00	0.00	32.69	4.55
49	50	2.760374	GCAGACTAAATGGGATCGGAG	58.240	52.381	0.00	0.00	0.00	4.63
50	51	2.548920	GCAGACTAAATGGGATCGGAGG	60.549	54.545	0.00	0.00	0.00	4.30
51	52	2.037772	CAGACTAAATGGGATCGGAGGG	59.962	54.545	0.00	0.00	0.00	4.30
52	53	2.090719	AGACTAAATGGGATCGGAGGGA	60.091	50.000	0.00	0.00	0.00	4.20
53	54	2.300437	GACTAAATGGGATCGGAGGGAG	59.700	54.545	0.00	0.00	0.00	4.30
54	55	2.330216	CTAAATGGGATCGGAGGGAGT	58.670	52.381	0.00	0.00	0.00	3.85
55	56	2.489528	AAATGGGATCGGAGGGAGTA	57.510	50.000	0.00	0.00	0.00	2.59
56	57	1.718280	AATGGGATCGGAGGGAGTAC	58.282	55.000	0.00	0.00	0.00	2.73
57	58	0.561184	ATGGGATCGGAGGGAGTACA	59.439	55.000	0.00	0.00	0.00	2.90
58	59	0.561184	TGGGATCGGAGGGAGTACAT	59.439	55.000	0.00	0.00	0.00	2.29
59	60	1.784593	TGGGATCGGAGGGAGTACATA	59.215	52.381	0.00	0.00	0.00	2.29
60	61	2.382305	TGGGATCGGAGGGAGTACATAT	59.618	50.000	0.00	0.00	0.00	1.78
61	62	3.025262	GGGATCGGAGGGAGTACATATC	58.975	54.545	0.00	0.00	0.00	1.63
62	63	3.309265	GGGATCGGAGGGAGTACATATCT	60.309	52.174	0.00	0.00	0.00	1.98
63	64	4.345854	GGATCGGAGGGAGTACATATCTT	58.654	47.826	0.00	0.00	0.00	2.40
64	65	4.773149	GGATCGGAGGGAGTACATATCTTT	59.227	45.833	0.00	0.00	0.00	2.52
75	76	5.538877	AGTACATATCTTTTCCTCCCCTGA	58.461	41.667	0.00	0.00	0.00	3.86
117	121	9.341899	CCAAATACTAACAGAGCACAAATAAAC	57.658	33.333	0.00	0.00	0.00	2.01
127	131	7.803189	ACAGAGCACAAATAAACTAAAACATCG	59.197	33.333	0.00	0.00	0.00	3.84
140	144	3.982576	AAACATCGTGGACTCAAAACC	57.017	42.857	0.00	0.00	0.00	3.27
141	145	2.631160	ACATCGTGGACTCAAAACCA	57.369	45.000	0.00	0.00	0.00	3.67
150	154	6.009115	GTGGACTCAAAACCACGATTAAAT	57.991	37.500	0.00	0.00	45.16	1.40
151	155	6.443792	GTGGACTCAAAACCACGATTAAATT	58.556	36.000	0.00	0.00	45.16	1.82
158	162	6.209788	TCAAAACCACGATTAAATTAGCCCTT	59.790	34.615	0.00	0.00	0.00	3.95
165	169	9.673454	CCACGATTAAATTAGCCCTTAATAAAC	57.327	33.333	0.00	0.00	31.68	2.01
167	171	9.328845	ACGATTAAATTAGCCCTTAATAAACGA	57.671	29.630	0.00	0.00	31.68	3.85
220	231	1.687494	GCGTTCTACTCTTGCGCCAG	61.687	60.000	4.18	2.55	41.93	4.85
348	366	3.393970	TCTCCCTTGGCTGGCTCG	61.394	66.667	2.00	0.00	0.00	5.03
383	410	1.302511	GCCCTTTGTTGCTCTCCGA	60.303	57.895	0.00	0.00	0.00	4.55
413	450	4.038080	CCGCCCGGCACAAACTTC	62.038	66.667	10.77	0.00	0.00	3.01
445	482	4.444081	CTCCGTCTCCGTCCCCCT	62.444	72.222	0.00	0.00	0.00	4.79
672	721	4.580167	TGGAGCCGAAAGATTCCATATTTG	59.420	41.667	0.00	0.00	38.11	2.32
680	729	9.463443	CCGAAAGATTCCATATTTGTTTATTCC	57.537	33.333	0.00	0.00	0.00	3.01
874	923	0.662374	CTTTCTTGCGCTGTTGCCTG	60.662	55.000	9.73	0.00	35.36	4.85
921	973	3.694043	GGATTTGCCTAGATCCCTCTC	57.306	52.381	0.00	0.00	36.61	3.20
922	974	3.247162	GGATTTGCCTAGATCCCTCTCT	58.753	50.000	0.00	0.00	36.61	3.10
968	1020	2.916934	TGGGATACTGCTAGGGTTTTGT	59.083	45.455	0.00	0.00	0.00	2.83
969	1021	3.054655	TGGGATACTGCTAGGGTTTTGTC	60.055	47.826	0.00	0.00	0.00	3.18
994	1047	3.430929	GCTCATAGGTTGTCTGTGGTAGG	60.431	52.174	0.00	0.00	35.60	3.18
996	1049	4.023980	TCATAGGTTGTCTGTGGTAGGAG	58.976	47.826	0.00	0.00	35.60	3.69
1020	1073	6.545298	AGAAGATGATTAAACAGATCCTTGGC	59.455	38.462	0.00	0.00	0.00	4.52
1184	1237	1.520342	CAGCTGGCTCCGCTTCTAC	60.520	63.158	5.57	0.00	35.07	2.59
1347	1400	3.307339	CCAAGAACCTGAAGGAGAAGGAG	60.307	52.174	2.62	0.00	37.01	3.69
1401	1454	4.439305	TTATGTCACTTCTGCAAATGGC	57.561	40.909	0.00	0.00	45.13	4.40
1413	1466	1.135575	GCAAATGGCAAGTTCTCGGAG	60.136	52.381	0.00	0.00	43.97	4.63
1764	1817	3.118519	GCCCATTCATCAGGAAAGCAATT	60.119	43.478	0.00	0.00	39.39	2.32
1875	1928	1.909700	TTGCCCTGCCACTTAAAGAG	58.090	50.000	0.00	0.00	0.00	2.85
1986	2039	4.780815	TCACACAGTTTGTTGAGAAGGAT	58.219	39.130	0.00	0.00	35.67	3.24
2022	2075	2.684881	CACTGTTATTAGGGGCTTGCTG	59.315	50.000	0.00	0.00	0.00	4.41
2385	2443	8.655970	GTTATGAAAAAGATTTACATGGGCAAC	58.344	33.333	0.00	0.00	0.00	4.17
2412	2470	3.242739	GCATGCCTTGGATGTTTACTACG	60.243	47.826	6.36	0.00	33.90	3.51
2438	2496	1.680735	TGTGCATCACAAGGGTGTTTC	59.319	47.619	0.00	0.00	45.45	2.78
2441	2499	3.030291	TGCATCACAAGGGTGTTTCTTT	58.970	40.909	0.00	0.00	45.45	2.52
2442	2500	3.181477	TGCATCACAAGGGTGTTTCTTTG	60.181	43.478	0.00	0.00	45.45	2.77
2443	2501	3.799917	GCATCACAAGGGTGTTTCTTTGG	60.800	47.826	0.00	0.00	45.45	3.28
2584	2881	2.576615	ACCAGGAAGAGAACACTTTGC	58.423	47.619	0.00	0.00	0.00	3.68
2661	2972	5.840715	TGCAACTTTTGTTATCTTGCATGA	58.159	33.333	4.57	4.57	41.35	3.07
2666	2977	7.054491	ACTTTTGTTATCTTGCATGAAACCT	57.946	32.000	6.36	0.00	0.00	3.50
2735	3049	3.820689	TGCGTCAGTTCAATTTACATGC	58.179	40.909	0.00	0.00	0.00	4.06
2755	3069	8.025243	ACATGCTGCTTGAAAAATATCTTTTG	57.975	30.769	20.66	0.00	34.81	2.44
2859	3190	7.560368	TGGAAAACACCATGTTCATTAGTTTT	58.440	30.769	13.98	13.98	40.14	2.43
2959	3290	6.525578	TTCTAGGATACAGGTGTTACACAG	57.474	41.667	17.67	11.24	35.66	3.66
3078	3410	5.742063	AGCCTGTACCTTTAATTACTGTCC	58.258	41.667	0.00	0.00	0.00	4.02
3176	3514	7.102993	TGCAGCAGTTTGTATCTTACTGAATA	58.897	34.615	0.00	0.00	41.33	1.75
3216	3559	7.808279	CCATAGGTTGGGGATCTATAAACTA	57.192	40.000	0.00	0.00	42.33	2.24
3239	3582	7.906527	ACTAAACTTGTTTGTTAAACTGTAGCG	59.093	33.333	8.79	0.00	41.90	4.26
3248	3591	2.594529	AAACTGTAGCGCATGAAACG	57.405	45.000	11.47	0.00	0.00	3.60
3297	3642	9.686683	ACATATAGCTTAACTTCCACATTTCTT	57.313	29.630	0.00	0.00	0.00	2.52
3324	3669	0.246635	GTTTCTAGGTGGCAGAGCGA	59.753	55.000	0.00	0.00	0.00	4.93
3572	3917	1.004918	CCAGTTCGAAGCGGGAAGT	60.005	57.895	0.00	0.00	0.00	3.01
4019	4368	6.909550	TTGGCTTACAACCAAATAGATTGT	57.090	33.333	0.00	0.00	44.11	2.71
4033	4382	8.522830	CCAAATAGATTGTTGGAACACTAATGT	58.477	33.333	0.00	0.00	46.11	2.71
4048	4397	7.349412	ACACTAATGTTATACTCCCTCAGTC	57.651	40.000	0.00	0.00	34.46	3.51
4049	4398	6.324254	ACACTAATGTTATACTCCCTCAGTCC	59.676	42.308	0.00	0.00	34.46	3.85
4050	4399	5.839606	ACTAATGTTATACTCCCTCAGTCCC	59.160	44.000	0.00	0.00	36.43	4.46
4051	4400	4.561254	ATGTTATACTCCCTCAGTCCCT	57.439	45.455	0.00	0.00	36.43	4.20
4052	4401	3.912248	TGTTATACTCCCTCAGTCCCTC	58.088	50.000	0.00	0.00	36.43	4.30
4053	4402	3.532232	TGTTATACTCCCTCAGTCCCTCT	59.468	47.826	0.00	0.00	36.43	3.69
4054	4403	2.765689	ATACTCCCTCAGTCCCTCTG	57.234	55.000	0.00	0.00	44.85	3.35
4055	4404	1.383963	TACTCCCTCAGTCCCTCTGT	58.616	55.000	0.00	0.00	43.97	3.41
4056	4405	0.489567	ACTCCCTCAGTCCCTCTGTT	59.510	55.000	0.00	0.00	43.97	3.16
4057	4406	1.190643	CTCCCTCAGTCCCTCTGTTC	58.809	60.000	0.00	0.00	43.97	3.18
4058	4407	0.252284	TCCCTCAGTCCCTCTGTTCC	60.252	60.000	0.00	0.00	43.97	3.62
4059	4408	0.252467	CCCTCAGTCCCTCTGTTCCT	60.252	60.000	0.00	0.00	43.97	3.36
4060	4409	1.007238	CCCTCAGTCCCTCTGTTCCTA	59.993	57.143	0.00	0.00	43.97	2.94
4061	4410	2.559931	CCCTCAGTCCCTCTGTTCCTAA	60.560	54.545	0.00	0.00	43.97	2.69
4062	4411	3.173965	CCTCAGTCCCTCTGTTCCTAAA	58.826	50.000	0.00	0.00	43.97	1.85
4063	4412	3.777522	CCTCAGTCCCTCTGTTCCTAAAT	59.222	47.826	0.00	0.00	43.97	1.40
4064	4413	4.962995	CCTCAGTCCCTCTGTTCCTAAATA	59.037	45.833	0.00	0.00	43.97	1.40
4065	4414	5.604650	CCTCAGTCCCTCTGTTCCTAAATAT	59.395	44.000	0.00	0.00	43.97	1.28
4066	4415	6.782988	CCTCAGTCCCTCTGTTCCTAAATATA	59.217	42.308	0.00	0.00	43.97	0.86
4067	4416	7.290248	CCTCAGTCCCTCTGTTCCTAAATATAA	59.710	40.741	0.00	0.00	43.97	0.98
4068	4417	8.251383	TCAGTCCCTCTGTTCCTAAATATAAG	57.749	38.462	0.00	0.00	43.97	1.73
4069	4418	7.844779	TCAGTCCCTCTGTTCCTAAATATAAGT	59.155	37.037	0.00	0.00	43.97	2.24
4070	4419	8.145122	CAGTCCCTCTGTTCCTAAATATAAGTC	58.855	40.741	0.00	0.00	39.17	3.01
4071	4420	8.068733	AGTCCCTCTGTTCCTAAATATAAGTCT	58.931	37.037	0.00	0.00	0.00	3.24
4072	4421	8.706521	GTCCCTCTGTTCCTAAATATAAGTCTT	58.293	37.037	0.00	0.00	0.00	3.01
4073	4422	9.280456	TCCCTCTGTTCCTAAATATAAGTCTTT	57.720	33.333	0.00	0.00	0.00	2.52
4074	4423	9.331282	CCCTCTGTTCCTAAATATAAGTCTTTG	57.669	37.037	0.00	0.00	0.00	2.77
4075	4424	8.831550	CCTCTGTTCCTAAATATAAGTCTTTGC	58.168	37.037	0.00	0.00	0.00	3.68
4076	4425	8.420374	TCTGTTCCTAAATATAAGTCTTTGCG	57.580	34.615	0.00	0.00	0.00	4.85
4077	4426	7.494625	TCTGTTCCTAAATATAAGTCTTTGCGG	59.505	37.037	0.00	0.00	0.00	5.69
4078	4427	7.332557	TGTTCCTAAATATAAGTCTTTGCGGA	58.667	34.615	0.00	0.00	0.00	5.54
4079	4428	7.494625	TGTTCCTAAATATAAGTCTTTGCGGAG	59.505	37.037	0.00	0.00	0.00	4.63
4080	4429	7.356089	TCCTAAATATAAGTCTTTGCGGAGA	57.644	36.000	0.00	0.00	0.00	3.71
4081	4430	7.963532	TCCTAAATATAAGTCTTTGCGGAGAT	58.036	34.615	0.00	0.00	0.00	2.75
4082	4431	8.429641	TCCTAAATATAAGTCTTTGCGGAGATT	58.570	33.333	0.00	0.00	0.00	2.40
4083	4432	8.713271	CCTAAATATAAGTCTTTGCGGAGATTC	58.287	37.037	0.00	0.00	0.00	2.52
4084	4433	7.497925	AAATATAAGTCTTTGCGGAGATTCC	57.502	36.000	0.00	0.00	0.00	3.01
4085	4434	2.859165	AAGTCTTTGCGGAGATTCCA	57.141	45.000	0.00	0.00	35.91	3.53
4086	4435	3.356529	AAGTCTTTGCGGAGATTCCAT	57.643	42.857	0.00	0.00	35.91	3.41
4087	4436	4.487714	AAGTCTTTGCGGAGATTCCATA	57.512	40.909	0.00	0.00	35.91	2.74
4088	4437	4.487714	AGTCTTTGCGGAGATTCCATAA	57.512	40.909	0.00	0.00	35.91	1.90
4089	4438	5.041191	AGTCTTTGCGGAGATTCCATAAT	57.959	39.130	0.00	0.00	35.91	1.28
4090	4439	4.818546	AGTCTTTGCGGAGATTCCATAATG	59.181	41.667	0.00	0.00	35.91	1.90
4091	4440	4.023707	GTCTTTGCGGAGATTCCATAATGG	60.024	45.833	0.00	0.00	35.91	3.16
4092	4441	3.855255	TTGCGGAGATTCCATAATGGA	57.145	42.857	0.00	0.00	46.61	3.41
4104	4453	5.977489	TCCATAATGGACTACATACGGAG	57.023	43.478	0.00	0.00	42.67	4.63
4105	4454	5.391256	TCCATAATGGACTACATACGGAGT	58.609	41.667	0.00	0.00	42.67	3.85
4106	4455	6.545567	TCCATAATGGACTACATACGGAGTA	58.454	40.000	0.00	0.00	45.10	2.59
4107	4456	7.005902	TCCATAATGGACTACATACGGAGTAA	58.994	38.462	0.00	0.00	44.48	2.24
4108	4457	7.506599	TCCATAATGGACTACATACGGAGTAAA	59.493	37.037	0.00	0.00	44.48	2.01
4109	4458	8.145767	CCATAATGGACTACATACGGAGTAAAA	58.854	37.037	0.00	0.00	43.87	1.52
4143	4492	8.750515	TGGATGAATCTACATTCTAAAATGCA	57.249	30.769	0.00	0.00	45.16	3.96
4144	4493	9.358406	TGGATGAATCTACATTCTAAAATGCAT	57.642	29.630	0.00	0.00	45.16	3.96
4145	4494	9.837525	GGATGAATCTACATTCTAAAATGCATC	57.162	33.333	0.00	0.00	45.16	3.91
4163	4512	8.917415	AATGCATCTATATATATCCGTATGCG	57.083	34.615	0.00	0.00	40.96	4.73
4175	4524	2.502213	CGTATGCGGTCCATAGTGAA	57.498	50.000	0.00	0.00	37.10	3.18
4176	4525	2.816689	CGTATGCGGTCCATAGTGAAA	58.183	47.619	0.00	0.00	37.10	2.69
4177	4526	3.390135	CGTATGCGGTCCATAGTGAAAT	58.610	45.455	0.00	0.00	37.10	2.17
4178	4527	3.184379	CGTATGCGGTCCATAGTGAAATG	59.816	47.826	0.00	0.00	37.10	2.32
4179	4528	2.779755	TGCGGTCCATAGTGAAATGT	57.220	45.000	0.00	0.00	0.00	2.71
4180	4529	2.627945	TGCGGTCCATAGTGAAATGTC	58.372	47.619	0.00	0.00	0.00	3.06
4181	4530	2.027653	TGCGGTCCATAGTGAAATGTCA	60.028	45.455	0.00	0.00	0.00	3.58
4182	4531	2.609459	GCGGTCCATAGTGAAATGTCAG	59.391	50.000	0.00	0.00	33.27	3.51
4183	4532	2.609459	CGGTCCATAGTGAAATGTCAGC	59.391	50.000	0.00	0.00	33.27	4.26
4184	4533	3.609853	GGTCCATAGTGAAATGTCAGCA	58.390	45.455	0.00	0.00	33.27	4.41
4185	4534	4.009675	GGTCCATAGTGAAATGTCAGCAA	58.990	43.478	0.00	0.00	33.27	3.91
4186	4535	4.458989	GGTCCATAGTGAAATGTCAGCAAA	59.541	41.667	0.00	0.00	33.27	3.68
4187	4536	5.048083	GGTCCATAGTGAAATGTCAGCAAAA	60.048	40.000	0.00	0.00	33.27	2.44
4188	4537	6.446318	GTCCATAGTGAAATGTCAGCAAAAA	58.554	36.000	0.00	0.00	33.27	1.94
4189	4538	6.363357	GTCCATAGTGAAATGTCAGCAAAAAC	59.637	38.462	0.00	0.00	33.27	2.43
4190	4539	6.265196	TCCATAGTGAAATGTCAGCAAAAACT	59.735	34.615	0.00	0.00	33.27	2.66
4191	4540	6.925165	CCATAGTGAAATGTCAGCAAAAACTT	59.075	34.615	0.00	0.00	33.27	2.66
4192	4541	7.095940	CCATAGTGAAATGTCAGCAAAAACTTG	60.096	37.037	0.00	0.00	33.27	3.16
4193	4542	5.723295	AGTGAAATGTCAGCAAAAACTTGT	58.277	33.333	0.00	0.00	33.27	3.16
4194	4543	6.862209	AGTGAAATGTCAGCAAAAACTTGTA	58.138	32.000	0.00	0.00	33.27	2.41
4195	4544	7.491682	AGTGAAATGTCAGCAAAAACTTGTAT	58.508	30.769	0.00	0.00	33.27	2.29
4196	4545	7.981225	AGTGAAATGTCAGCAAAAACTTGTATT	59.019	29.630	0.00	0.00	33.27	1.89
4197	4546	8.603181	GTGAAATGTCAGCAAAAACTTGTATTT	58.397	29.630	0.00	0.00	33.27	1.40
4198	4547	9.809096	TGAAATGTCAGCAAAAACTTGTATTTA	57.191	25.926	0.00	0.00	0.00	1.40
4200	4549	8.816640	AATGTCAGCAAAAACTTGTATTTAGG	57.183	30.769	0.00	0.00	0.00	2.69
4201	4550	7.575414	TGTCAGCAAAAACTTGTATTTAGGA	57.425	32.000	0.00	0.00	0.00	2.94
4202	4551	8.001881	TGTCAGCAAAAACTTGTATTTAGGAA	57.998	30.769	0.00	0.00	0.00	3.36
4203	4552	7.918562	TGTCAGCAAAAACTTGTATTTAGGAAC	59.081	33.333	0.00	0.00	0.00	3.62
4204	4553	7.918562	GTCAGCAAAAACTTGTATTTAGGAACA	59.081	33.333	0.00	0.00	0.00	3.18
4205	4554	8.134895	TCAGCAAAAACTTGTATTTAGGAACAG	58.865	33.333	0.00	0.00	0.00	3.16
4206	4555	8.134895	CAGCAAAAACTTGTATTTAGGAACAGA	58.865	33.333	0.00	0.00	0.00	3.41
4207	4556	8.352942	AGCAAAAACTTGTATTTAGGAACAGAG	58.647	33.333	0.00	0.00	0.00	3.35
4208	4557	7.595130	GCAAAAACTTGTATTTAGGAACAGAGG	59.405	37.037	0.00	0.00	0.00	3.69
4209	4558	6.819397	AAACTTGTATTTAGGAACAGAGGC	57.181	37.500	0.00	0.00	0.00	4.70
4210	4559	5.763876	ACTTGTATTTAGGAACAGAGGCT	57.236	39.130	0.00	0.00	0.00	4.58
4211	4560	6.869206	ACTTGTATTTAGGAACAGAGGCTA	57.131	37.500	0.00	0.00	0.00	3.93
4212	4561	7.439108	ACTTGTATTTAGGAACAGAGGCTAT	57.561	36.000	0.00	0.00	0.00	2.97
4213	4562	8.548880	ACTTGTATTTAGGAACAGAGGCTATA	57.451	34.615	0.00	0.00	0.00	1.31
4214	4563	9.160412	ACTTGTATTTAGGAACAGAGGCTATAT	57.840	33.333	0.00	0.00	0.00	0.86
4220	4569	8.792830	TTTAGGAACAGAGGCTATATTTAGGA	57.207	34.615	0.00	0.00	0.00	2.94
4221	4570	8.792830	TTAGGAACAGAGGCTATATTTAGGAA	57.207	34.615	0.00	0.00	0.00	3.36
4222	4571	7.309770	AGGAACAGAGGCTATATTTAGGAAG	57.690	40.000	0.00	0.00	0.00	3.46
4223	4572	6.271159	AGGAACAGAGGCTATATTTAGGAAGG	59.729	42.308	0.00	0.00	0.00	3.46
4224	4573	6.270231	GGAACAGAGGCTATATTTAGGAAGGA	59.730	42.308	0.00	0.00	0.00	3.36
4225	4574	6.673839	ACAGAGGCTATATTTAGGAAGGAC	57.326	41.667	0.00	0.00	0.00	3.85
4226	4575	5.544562	ACAGAGGCTATATTTAGGAAGGACC	59.455	44.000	0.00	0.00	39.35	4.46
4235	4584	4.131932	GGAAGGACCTCCGTTCCT	57.868	61.111	0.00	0.00	42.08	3.36
4236	4585	3.294904	GGAAGGACCTCCGTTCCTA	57.705	57.895	0.00	0.00	42.08	2.94
4237	4586	1.565067	GGAAGGACCTCCGTTCCTAA	58.435	55.000	0.00	0.00	42.08	2.69
4238	4587	1.904537	GGAAGGACCTCCGTTCCTAAA	59.095	52.381	0.00	0.00	42.08	1.85
4239	4588	2.504585	GGAAGGACCTCCGTTCCTAAAT	59.495	50.000	0.00	0.00	42.08	1.40
4240	4589	3.708121	GGAAGGACCTCCGTTCCTAAATA	59.292	47.826	0.00	0.00	42.08	1.40
4241	4590	4.347292	GGAAGGACCTCCGTTCCTAAATAT	59.653	45.833	0.00	0.00	42.08	1.28
4242	4591	5.541484	GGAAGGACCTCCGTTCCTAAATATA	59.459	44.000	0.00	0.00	42.08	0.86
4243	4592	6.042437	GGAAGGACCTCCGTTCCTAAATATAA	59.958	42.308	0.00	0.00	42.08	0.98
4244	4593	6.667558	AGGACCTCCGTTCCTAAATATAAG	57.332	41.667	0.00	0.00	42.08	1.73
4245	4594	6.141790	AGGACCTCCGTTCCTAAATATAAGT	58.858	40.000	0.00	0.00	42.08	2.24
4246	4595	6.267242	AGGACCTCCGTTCCTAAATATAAGTC	59.733	42.308	0.00	0.00	42.08	3.01
4247	4596	6.416631	ACCTCCGTTCCTAAATATAAGTCC	57.583	41.667	0.00	0.00	0.00	3.85
4248	4597	6.141790	ACCTCCGTTCCTAAATATAAGTCCT	58.858	40.000	0.00	0.00	0.00	3.85
4249	4598	6.614496	ACCTCCGTTCCTAAATATAAGTCCTT	59.386	38.462	0.00	0.00	0.00	3.36
4250	4599	7.126879	ACCTCCGTTCCTAAATATAAGTCCTTT	59.873	37.037	0.00	0.00	0.00	3.11
4251	4600	7.991460	CCTCCGTTCCTAAATATAAGTCCTTTT	59.009	37.037	0.00	0.00	0.00	2.27
4281	4630	9.344309	GATTTCTTTATAGACTACATACGGAGC	57.656	37.037	0.00	0.00	0.00	4.70
4282	4631	7.812690	TTCTTTATAGACTACATACGGAGCA	57.187	36.000	0.00	0.00	0.00	4.26
4283	4632	7.812690	TCTTTATAGACTACATACGGAGCAA	57.187	36.000	0.00	0.00	0.00	3.91
4284	4633	8.229253	TCTTTATAGACTACATACGGAGCAAA	57.771	34.615	0.00	0.00	0.00	3.68
4285	4634	8.689061	TCTTTATAGACTACATACGGAGCAAAA	58.311	33.333	0.00	0.00	0.00	2.44
4286	4635	9.477484	CTTTATAGACTACATACGGAGCAAAAT	57.523	33.333	0.00	0.00	0.00	1.82
4287	4636	8.812147	TTATAGACTACATACGGAGCAAAATG	57.188	34.615	0.00	0.00	0.00	2.32
4288	4637	5.339008	AGACTACATACGGAGCAAAATGA	57.661	39.130	0.00	0.00	0.00	2.57
4289	4638	5.352284	AGACTACATACGGAGCAAAATGAG	58.648	41.667	0.00	0.00	0.00	2.90
4290	4639	5.086104	ACTACATACGGAGCAAAATGAGT	57.914	39.130	0.00	0.00	0.00	3.41
4291	4640	4.870426	ACTACATACGGAGCAAAATGAGTG	59.130	41.667	0.00	0.00	0.00	3.51
4292	4641	3.937814	ACATACGGAGCAAAATGAGTGA	58.062	40.909	0.00	0.00	0.00	3.41
4293	4642	4.323417	ACATACGGAGCAAAATGAGTGAA	58.677	39.130	0.00	0.00	0.00	3.18
4294	4643	4.154195	ACATACGGAGCAAAATGAGTGAAC	59.846	41.667	0.00	0.00	0.00	3.18
4295	4644	2.851195	ACGGAGCAAAATGAGTGAACT	58.149	42.857	0.00	0.00	0.00	3.01
4296	4645	3.214328	ACGGAGCAAAATGAGTGAACTT	58.786	40.909	0.00	0.00	0.00	2.66
4297	4646	4.385825	ACGGAGCAAAATGAGTGAACTTA	58.614	39.130	0.00	0.00	0.00	2.24
4298	4647	5.003804	ACGGAGCAAAATGAGTGAACTTAT	58.996	37.500	0.00	0.00	0.00	1.73
4299	4648	6.170506	ACGGAGCAAAATGAGTGAACTTATA	58.829	36.000	0.00	0.00	0.00	0.98
4300	4649	6.092259	ACGGAGCAAAATGAGTGAACTTATAC	59.908	38.462	0.00	0.00	0.00	1.47
4301	4650	6.313905	CGGAGCAAAATGAGTGAACTTATACT	59.686	38.462	0.00	0.00	0.00	2.12
4302	4651	7.464710	CGGAGCAAAATGAGTGAACTTATACTC	60.465	40.741	0.00	0.00	42.77	2.59
4303	4652	7.550906	GGAGCAAAATGAGTGAACTTATACTCT	59.449	37.037	0.00	0.00	42.86	3.24
4304	4653	8.261492	AGCAAAATGAGTGAACTTATACTCTG	57.739	34.615	0.00	0.00	42.86	3.35
4305	4654	8.097038	AGCAAAATGAGTGAACTTATACTCTGA	58.903	33.333	0.00	0.00	42.86	3.27
4306	4655	8.721478	GCAAAATGAGTGAACTTATACTCTGAA	58.279	33.333	0.00	0.00	42.86	3.02
4311	4660	9.814899	ATGAGTGAACTTATACTCTGAAAGATG	57.185	33.333	0.00	0.00	45.62	2.90
4312	4661	8.807118	TGAGTGAACTTATACTCTGAAAGATGT	58.193	33.333	0.00	0.00	45.62	3.06
4313	4662	9.296400	GAGTGAACTTATACTCTGAAAGATGTC	57.704	37.037	0.00	0.00	45.62	3.06
4314	4663	9.030452	AGTGAACTTATACTCTGAAAGATGTCT	57.970	33.333	0.00	0.00	45.62	3.41
4345	4694	9.469807	ACATTCGAATGTCTCTATAGTGAAATC	57.530	33.333	32.82	5.66	46.10	2.17
4346	4695	9.689976	CATTCGAATGTCTCTATAGTGAAATCT	57.310	33.333	26.58	0.54	0.00	2.40
4347	4696	9.906660	ATTCGAATGTCTCTATAGTGAAATCTC	57.093	33.333	10.50	7.22	0.00	2.75
4348	4697	8.684386	TCGAATGTCTCTATAGTGAAATCTCT	57.316	34.615	7.74	0.00	0.00	3.10
4349	4698	9.780186	TCGAATGTCTCTATAGTGAAATCTCTA	57.220	33.333	7.74	0.00	0.00	2.43
4374	4723	7.525158	AAAAATTAGGAATGGAGGGAGTAGA	57.475	36.000	0.00	0.00	0.00	2.59
4375	4724	7.525158	AAAATTAGGAATGGAGGGAGTAGAA	57.475	36.000	0.00	0.00	0.00	2.10
4376	4725	6.755542	AATTAGGAATGGAGGGAGTAGAAG	57.244	41.667	0.00	0.00	0.00	2.85
4377	4726	3.786213	AGGAATGGAGGGAGTAGAAGT	57.214	47.619	0.00	0.00	0.00	3.01
4378	4727	3.379452	AGGAATGGAGGGAGTAGAAGTG	58.621	50.000	0.00	0.00	0.00	3.16
4379	4728	3.012959	AGGAATGGAGGGAGTAGAAGTGA	59.987	47.826	0.00	0.00	0.00	3.41
4380	4729	3.970640	GGAATGGAGGGAGTAGAAGTGAT	59.029	47.826	0.00	0.00	0.00	3.06
4381	4730	4.039852	GGAATGGAGGGAGTAGAAGTGATC	59.960	50.000	0.00	0.00	0.00	2.92
4382	4731	3.033659	TGGAGGGAGTAGAAGTGATCC	57.966	52.381	0.00	0.00	0.00	3.36
4383	4732	2.587777	TGGAGGGAGTAGAAGTGATCCT	59.412	50.000	0.00	0.00	32.18	3.24
4384	4733	3.227614	GGAGGGAGTAGAAGTGATCCTC	58.772	54.545	0.00	0.00	38.74	3.71
4385	4734	3.373220	GGAGGGAGTAGAAGTGATCCTCA	60.373	52.174	0.00	0.00	40.58	3.86
4386	4735	3.888930	GAGGGAGTAGAAGTGATCCTCAG	59.111	52.174	0.00	0.00	39.14	3.35
4387	4736	2.962421	GGGAGTAGAAGTGATCCTCAGG	59.038	54.545	0.00	0.00	32.18	3.86
4388	4737	2.364002	GGAGTAGAAGTGATCCTCAGGC	59.636	54.545	0.00	0.00	0.00	4.85
4389	4738	3.027412	GAGTAGAAGTGATCCTCAGGCA	58.973	50.000	0.00	0.00	0.00	4.75
4390	4739	2.763448	AGTAGAAGTGATCCTCAGGCAC	59.237	50.000	0.00	0.00	0.00	5.01
4391	4740	0.534412	AGAAGTGATCCTCAGGCACG	59.466	55.000	0.00	0.00	37.60	5.34
4392	4741	0.247736	GAAGTGATCCTCAGGCACGT	59.752	55.000	0.00	0.00	37.60	4.49
4393	4742	0.687354	AAGTGATCCTCAGGCACGTT	59.313	50.000	0.00	0.00	37.60	3.99
4394	4743	0.247736	AGTGATCCTCAGGCACGTTC	59.752	55.000	0.00	0.00	37.60	3.95
4395	4744	1.078759	GTGATCCTCAGGCACGTTCG	61.079	60.000	0.00	0.00	0.00	3.95
4396	4745	1.248101	TGATCCTCAGGCACGTTCGA	61.248	55.000	0.00	0.00	0.00	3.71
4397	4746	0.103208	GATCCTCAGGCACGTTCGAT	59.897	55.000	0.00	0.00	0.00	3.59
4398	4747	0.103208	ATCCTCAGGCACGTTCGATC	59.897	55.000	0.00	0.00	0.00	3.69
4399	4748	1.519455	CCTCAGGCACGTTCGATCC	60.519	63.158	0.00	0.00	0.00	3.36
4400	4749	1.519455	CTCAGGCACGTTCGATCCC	60.519	63.158	0.00	0.00	0.00	3.85
4401	4750	2.885644	CAGGCACGTTCGATCCCG	60.886	66.667	0.00	0.00	37.07	5.14
4402	4751	4.814294	AGGCACGTTCGATCCCGC	62.814	66.667	0.00	0.00	35.37	6.13
4405	4754	4.143333	CACGTTCGATCCCGCCCT	62.143	66.667	0.00	0.00	35.37	5.19
4406	4755	3.834799	ACGTTCGATCCCGCCCTC	61.835	66.667	0.00	0.00	35.37	4.30
4407	4756	3.528370	CGTTCGATCCCGCCCTCT	61.528	66.667	0.00	0.00	35.37	3.69
4408	4757	2.417936	GTTCGATCCCGCCCTCTC	59.582	66.667	0.00	0.00	35.37	3.20
4409	4758	2.838225	TTCGATCCCGCCCTCTCC	60.838	66.667	0.00	0.00	35.37	3.71
4410	4759	3.672338	TTCGATCCCGCCCTCTCCA	62.672	63.158	0.00	0.00	35.37	3.86
4411	4760	2.919856	CGATCCCGCCCTCTCCAT	60.920	66.667	0.00	0.00	0.00	3.41
4412	4761	2.746359	GATCCCGCCCTCTCCATG	59.254	66.667	0.00	0.00	0.00	3.66
4413	4762	2.040464	ATCCCGCCCTCTCCATGT	60.040	61.111	0.00	0.00	0.00	3.21
4414	4763	2.388890	GATCCCGCCCTCTCCATGTG	62.389	65.000	0.00	0.00	0.00	3.21
4415	4764	2.896677	ATCCCGCCCTCTCCATGTGA	62.897	60.000	0.00	0.00	0.00	3.58
4416	4765	2.669133	CCCGCCCTCTCCATGTGAA	61.669	63.158	0.00	0.00	0.00	3.18
4417	4766	1.450312	CCGCCCTCTCCATGTGAAC	60.450	63.158	0.00	0.00	0.00	3.18
4418	4767	1.599047	CGCCCTCTCCATGTGAACT	59.401	57.895	0.00	0.00	0.00	3.01
4419	4768	0.824109	CGCCCTCTCCATGTGAACTA	59.176	55.000	0.00	0.00	0.00	2.24
4420	4769	1.414181	CGCCCTCTCCATGTGAACTAT	59.586	52.381	0.00	0.00	0.00	2.12
4421	4770	2.804572	CGCCCTCTCCATGTGAACTATG	60.805	54.545	0.00	0.00	0.00	2.23
4422	4771	2.435805	GCCCTCTCCATGTGAACTATGA	59.564	50.000	0.00	0.00	0.00	2.15
4423	4772	3.494048	GCCCTCTCCATGTGAACTATGAG	60.494	52.174	0.00	0.00	0.00	2.90
4424	4773	3.494048	CCCTCTCCATGTGAACTATGAGC	60.494	52.174	0.00	0.00	0.00	4.26
4425	4774	3.387374	CCTCTCCATGTGAACTATGAGCT	59.613	47.826	0.00	0.00	0.00	4.09
4426	4775	4.370049	CTCTCCATGTGAACTATGAGCTG	58.630	47.826	0.00	0.00	0.00	4.24
4427	4776	4.026052	TCTCCATGTGAACTATGAGCTGA	58.974	43.478	0.00	0.00	0.00	4.26
4428	4777	4.652881	TCTCCATGTGAACTATGAGCTGAT	59.347	41.667	0.00	0.00	0.00	2.90
4429	4778	4.700700	TCCATGTGAACTATGAGCTGATG	58.299	43.478	0.00	0.00	0.00	3.07
4430	4779	3.813724	CCATGTGAACTATGAGCTGATGG	59.186	47.826	0.00	0.00	0.00	3.51
4431	4780	2.910199	TGTGAACTATGAGCTGATGGC	58.090	47.619	0.00	0.00	42.19	4.40
4432	4781	2.236893	TGTGAACTATGAGCTGATGGCA	59.763	45.455	0.00	0.00	44.79	4.92
4433	4782	2.871022	GTGAACTATGAGCTGATGGCAG	59.129	50.000	0.00	0.00	44.79	4.85
4434	4783	2.502947	TGAACTATGAGCTGATGGCAGT	59.497	45.455	0.00	0.00	44.17	4.40
4435	4784	2.906691	ACTATGAGCTGATGGCAGTC	57.093	50.000	0.00	0.00	44.17	3.51
4436	4785	1.068281	ACTATGAGCTGATGGCAGTCG	59.932	52.381	0.00	0.00	44.17	4.18
4437	4786	1.068281	CTATGAGCTGATGGCAGTCGT	59.932	52.381	0.00	0.00	44.17	4.34
4438	4787	0.251354	ATGAGCTGATGGCAGTCGTT	59.749	50.000	0.00	0.00	44.17	3.85
4439	4788	0.671472	TGAGCTGATGGCAGTCGTTG	60.671	55.000	0.00	0.00	44.17	4.10
4440	4789	0.390340	GAGCTGATGGCAGTCGTTGA	60.390	55.000	0.00	0.00	44.17	3.18
4441	4790	0.251354	AGCTGATGGCAGTCGTTGAT	59.749	50.000	0.00	0.00	44.17	2.57
4442	4791	0.376152	GCTGATGGCAGTCGTTGATG	59.624	55.000	0.00	0.00	44.17	3.07
4443	4792	1.730501	CTGATGGCAGTCGTTGATGT	58.269	50.000	0.00	0.00	37.37	3.06
4444	4793	2.892374	CTGATGGCAGTCGTTGATGTA	58.108	47.619	0.00	0.00	37.37	2.29
4445	4794	2.862536	CTGATGGCAGTCGTTGATGTAG	59.137	50.000	0.00	0.00	37.37	2.74
4446	4795	1.594862	GATGGCAGTCGTTGATGTAGC	59.405	52.381	0.00	0.00	0.00	3.58
4447	4796	0.320050	TGGCAGTCGTTGATGTAGCA	59.680	50.000	0.00	0.00	0.00	3.49
4448	4797	1.066215	TGGCAGTCGTTGATGTAGCAT	60.066	47.619	0.00	0.00	0.00	3.79
4449	4798	1.328680	GGCAGTCGTTGATGTAGCATG	59.671	52.381	0.00	0.00	0.00	4.06
4450	4799	1.328680	GCAGTCGTTGATGTAGCATGG	59.671	52.381	0.00	0.00	0.00	3.66
4451	4800	1.328680	CAGTCGTTGATGTAGCATGGC	59.671	52.381	0.00	0.00	0.00	4.40
4452	4801	1.066215	AGTCGTTGATGTAGCATGGCA	60.066	47.619	0.00	0.00	0.00	4.92
4453	4802	1.942657	GTCGTTGATGTAGCATGGCAT	59.057	47.619	0.00	0.00	0.00	4.40
4454	4803	2.355756	GTCGTTGATGTAGCATGGCATT	59.644	45.455	0.00	0.00	0.00	3.56
4455	4804	3.016031	TCGTTGATGTAGCATGGCATTT	58.984	40.909	0.00	0.00	0.00	2.32
4456	4805	3.443329	TCGTTGATGTAGCATGGCATTTT	59.557	39.130	0.00	0.00	0.00	1.82
4457	4806	4.082300	TCGTTGATGTAGCATGGCATTTTT	60.082	37.500	0.00	0.00	0.00	1.94
4480	4829	6.509418	TTTCCAACTACTACATGCAAATCC	57.491	37.500	0.00	0.00	0.00	3.01
4481	4830	5.435686	TCCAACTACTACATGCAAATCCT	57.564	39.130	0.00	0.00	0.00	3.24
4482	4831	5.185454	TCCAACTACTACATGCAAATCCTG	58.815	41.667	0.00	0.00	0.00	3.86
4483	4832	4.336433	CCAACTACTACATGCAAATCCTGG	59.664	45.833	0.00	0.00	0.00	4.45
4484	4833	4.844349	ACTACTACATGCAAATCCTGGT	57.156	40.909	0.00	0.00	0.00	4.00
4485	4834	5.950544	ACTACTACATGCAAATCCTGGTA	57.049	39.130	0.00	0.00	0.00	3.25
4486	4835	6.308015	ACTACTACATGCAAATCCTGGTAA	57.692	37.500	0.00	0.00	0.00	2.85
4487	4836	6.900194	ACTACTACATGCAAATCCTGGTAAT	58.100	36.000	0.00	0.00	0.00	1.89
4488	4837	7.346471	ACTACTACATGCAAATCCTGGTAATT	58.654	34.615	0.00	0.00	0.00	1.40
4489	4838	6.699575	ACTACATGCAAATCCTGGTAATTC	57.300	37.500	0.00	0.00	0.00	2.17
4490	4839	6.426587	ACTACATGCAAATCCTGGTAATTCT	58.573	36.000	0.00	0.00	0.00	2.40
4491	4840	6.891908	ACTACATGCAAATCCTGGTAATTCTT	59.108	34.615	0.00	0.00	0.00	2.52
4492	4841	8.052748	ACTACATGCAAATCCTGGTAATTCTTA	58.947	33.333	0.00	0.00	0.00	2.10
4493	4842	7.100458	ACATGCAAATCCTGGTAATTCTTAC	57.900	36.000	0.00	0.00	35.39	2.34
4524	4873	3.848272	TTTTTAGGCTGGCAATTCTCG	57.152	42.857	3.38	0.00	0.00	4.04
4525	4874	2.779755	TTTAGGCTGGCAATTCTCGA	57.220	45.000	3.38	0.00	0.00	4.04
4526	4875	3.281727	TTTAGGCTGGCAATTCTCGAT	57.718	42.857	3.38	0.00	0.00	3.59
4527	4876	2.245159	TAGGCTGGCAATTCTCGATG	57.755	50.000	3.38	0.00	0.00	3.84
4528	4877	0.254178	AGGCTGGCAATTCTCGATGT	59.746	50.000	3.38	0.00	0.00	3.06
4529	4878	1.098050	GGCTGGCAATTCTCGATGTT	58.902	50.000	0.00	0.00	0.00	2.71
4530	4879	1.474077	GGCTGGCAATTCTCGATGTTT	59.526	47.619	0.00	0.00	0.00	2.83
4531	4880	2.523015	GCTGGCAATTCTCGATGTTTG	58.477	47.619	0.00	0.00	0.00	2.93
4532	4881	2.523015	CTGGCAATTCTCGATGTTTGC	58.477	47.619	14.49	14.49	42.81	3.68
4533	4882	1.885233	TGGCAATTCTCGATGTTTGCA	59.115	42.857	20.76	9.75	44.77	4.08
4534	4883	2.492881	TGGCAATTCTCGATGTTTGCAT	59.507	40.909	20.76	0.00	44.77	3.96
4535	4884	3.111098	GGCAATTCTCGATGTTTGCATC	58.889	45.455	20.76	7.38	44.77	3.91
4547	4896	5.670792	ATGTTTGCATCATGACAAATCCT	57.329	34.783	12.92	1.69	38.01	3.24
4548	4897	5.471556	TGTTTGCATCATGACAAATCCTT	57.528	34.783	12.92	0.00	38.01	3.36
4549	4898	5.856156	TGTTTGCATCATGACAAATCCTTT	58.144	33.333	12.92	0.00	38.01	3.11
4550	4899	6.990798	TGTTTGCATCATGACAAATCCTTTA	58.009	32.000	12.92	0.00	38.01	1.85
4551	4900	7.440198	TGTTTGCATCATGACAAATCCTTTAA	58.560	30.769	12.92	0.00	38.01	1.52
4552	4901	7.930325	TGTTTGCATCATGACAAATCCTTTAAA	59.070	29.630	12.92	0.00	38.01	1.52
4553	4902	8.772705	GTTTGCATCATGACAAATCCTTTAAAA	58.227	29.630	12.92	0.00	38.01	1.52
4554	4903	7.887996	TGCATCATGACAAATCCTTTAAAAC	57.112	32.000	0.00	0.00	0.00	2.43
4555	4904	6.585702	TGCATCATGACAAATCCTTTAAAACG	59.414	34.615	0.00	0.00	0.00	3.60
4556	4905	6.454186	GCATCATGACAAATCCTTTAAAACGC	60.454	38.462	0.00	0.00	0.00	4.84
4557	4906	6.078202	TCATGACAAATCCTTTAAAACGCA	57.922	33.333	0.00	0.00	0.00	5.24
4558	4907	5.918011	TCATGACAAATCCTTTAAAACGCAC	59.082	36.000	0.00	0.00	0.00	5.34
4559	4908	4.283678	TGACAAATCCTTTAAAACGCACG	58.716	39.130	0.00	0.00	0.00	5.34
4560	4909	4.035324	TGACAAATCCTTTAAAACGCACGA	59.965	37.500	0.00	0.00	0.00	4.35
4561	4910	4.284485	ACAAATCCTTTAAAACGCACGAC	58.716	39.130	0.00	0.00	0.00	4.34
4562	4911	4.201930	ACAAATCCTTTAAAACGCACGACA	60.202	37.500	0.00	0.00	0.00	4.35
4563	4912	4.555348	AATCCTTTAAAACGCACGACAA	57.445	36.364	0.00	0.00	0.00	3.18
4564	4913	4.759516	ATCCTTTAAAACGCACGACAAT	57.240	36.364	0.00	0.00	0.00	2.71
4565	4914	4.555348	TCCTTTAAAACGCACGACAATT	57.445	36.364	0.00	0.00	0.00	2.32
4566	4915	5.670149	TCCTTTAAAACGCACGACAATTA	57.330	34.783	0.00	0.00	0.00	1.40
4567	4916	6.243811	TCCTTTAAAACGCACGACAATTAT	57.756	33.333	0.00	0.00	0.00	1.28
4568	4917	6.670233	TCCTTTAAAACGCACGACAATTATT	58.330	32.000	0.00	0.00	0.00	1.40
4569	4918	6.797995	TCCTTTAAAACGCACGACAATTATTC	59.202	34.615	0.00	0.00	0.00	1.75
4570	4919	6.799925	CCTTTAAAACGCACGACAATTATTCT	59.200	34.615	0.00	0.00	0.00	2.40
4571	4920	7.007099	CCTTTAAAACGCACGACAATTATTCTC	59.993	37.037	0.00	0.00	0.00	2.87
4572	4921	5.351233	AAAACGCACGACAATTATTCTCA	57.649	34.783	0.00	0.00	0.00	3.27
4573	4922	5.545658	AAACGCACGACAATTATTCTCAT	57.454	34.783	0.00	0.00	0.00	2.90
4574	4923	4.520743	ACGCACGACAATTATTCTCATG	57.479	40.909	0.00	0.00	0.00	3.07
4575	4924	3.242413	ACGCACGACAATTATTCTCATGC	60.242	43.478	0.00	0.00	0.00	4.06
4576	4925	3.242381	CGCACGACAATTATTCTCATGCA	60.242	43.478	2.71	0.00	0.00	3.96
4577	4926	4.277258	GCACGACAATTATTCTCATGCAG	58.723	43.478	0.00	0.00	0.00	4.41
4578	4927	4.277258	CACGACAATTATTCTCATGCAGC	58.723	43.478	0.00	0.00	0.00	5.25
4579	4928	3.940852	ACGACAATTATTCTCATGCAGCA	59.059	39.130	0.00	0.00	0.00	4.41
4580	4929	4.395854	ACGACAATTATTCTCATGCAGCAA	59.604	37.500	0.00	0.00	0.00	3.91
4581	4930	4.968181	CGACAATTATTCTCATGCAGCAAG	59.032	41.667	0.00	0.00	0.00	4.01
4582	4931	5.258456	ACAATTATTCTCATGCAGCAAGG	57.742	39.130	0.00	0.00	0.00	3.61
4583	4932	4.049186	CAATTATTCTCATGCAGCAAGGC	58.951	43.478	0.00	0.00	0.00	4.35
4592	4941	2.157834	TGCAGCAAGGCATTTTTCTG	57.842	45.000	0.00	1.72	39.25	3.02
4593	4942	1.687660	TGCAGCAAGGCATTTTTCTGA	59.312	42.857	0.00	0.00	39.25	3.27
4594	4943	2.288579	TGCAGCAAGGCATTTTTCTGAG	60.289	45.455	0.00	0.00	39.25	3.35
4595	4944	2.029649	GCAGCAAGGCATTTTTCTGAGA	60.030	45.455	8.42	0.00	0.00	3.27
4596	4945	3.368116	GCAGCAAGGCATTTTTCTGAGAT	60.368	43.478	8.42	0.00	0.00	2.75
4597	4946	4.817517	CAGCAAGGCATTTTTCTGAGATT	58.182	39.130	0.11	0.00	0.00	2.40
4598	4947	5.235516	CAGCAAGGCATTTTTCTGAGATTT	58.764	37.500	0.11	0.00	0.00	2.17
4599	4948	5.699458	CAGCAAGGCATTTTTCTGAGATTTT	59.301	36.000	0.11	0.00	0.00	1.82
4600	4949	6.204108	CAGCAAGGCATTTTTCTGAGATTTTT	59.796	34.615	0.11	0.00	0.00	1.94
4618	4967	4.696479	TTTTTACACAACATGGGGCAAT	57.304	36.364	0.00	0.00	0.00	3.56
4619	4968	4.696479	TTTTACACAACATGGGGCAATT	57.304	36.364	0.00	0.00	0.00	2.32
4620	4969	4.696479	TTTACACAACATGGGGCAATTT	57.304	36.364	0.00	0.00	0.00	1.82
4621	4970	4.696479	TTACACAACATGGGGCAATTTT	57.304	36.364	0.00	0.00	0.00	1.82
4622	4971	3.574354	ACACAACATGGGGCAATTTTT	57.426	38.095	0.00	0.00	0.00	1.94
4623	4972	4.696479	ACACAACATGGGGCAATTTTTA	57.304	36.364	0.00	0.00	0.00	1.52
4624	4973	5.240013	ACACAACATGGGGCAATTTTTAT	57.760	34.783	0.00	0.00	0.00	1.40
4625	4974	5.002516	ACACAACATGGGGCAATTTTTATG	58.997	37.500	0.00	0.00	0.00	1.90
4626	4975	5.002516	CACAACATGGGGCAATTTTTATGT	58.997	37.500	0.00	0.00	0.00	2.29
4627	4976	6.169094	CACAACATGGGGCAATTTTTATGTA	58.831	36.000	0.00	0.00	0.00	2.29
4628	4977	6.313411	CACAACATGGGGCAATTTTTATGTAG	59.687	38.462	0.00	0.00	0.00	2.74
4629	4978	6.212388	ACAACATGGGGCAATTTTTATGTAGA	59.788	34.615	0.00	0.00	0.00	2.59
4630	4979	6.865834	ACATGGGGCAATTTTTATGTAGAA	57.134	33.333	0.00	0.00	0.00	2.10
4631	4980	6.639563	ACATGGGGCAATTTTTATGTAGAAC	58.360	36.000	0.00	0.00	0.00	3.01
4632	4981	5.317733	TGGGGCAATTTTTATGTAGAACG	57.682	39.130	0.00	0.00	0.00	3.95
4633	4982	4.767928	TGGGGCAATTTTTATGTAGAACGT	59.232	37.500	0.00	0.00	0.00	3.99
4634	4983	5.099575	GGGGCAATTTTTATGTAGAACGTG	58.900	41.667	0.00	0.00	0.00	4.49
4635	4984	5.106078	GGGGCAATTTTTATGTAGAACGTGA	60.106	40.000	0.00	0.00	0.00	4.35
4636	4985	5.798434	GGGCAATTTTTATGTAGAACGTGAC	59.202	40.000	0.00	0.00	0.00	3.67
4637	4986	6.375377	GGCAATTTTTATGTAGAACGTGACA	58.625	36.000	0.00	0.00	0.00	3.58
4638	4987	6.858993	GGCAATTTTTATGTAGAACGTGACAA	59.141	34.615	0.00	0.00	0.00	3.18
4639	4988	7.540745	GGCAATTTTTATGTAGAACGTGACAAT	59.459	33.333	0.00	0.00	0.00	2.71
4640	4989	8.911662	GCAATTTTTATGTAGAACGTGACAATT	58.088	29.630	0.00	0.00	0.00	2.32

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	8.514330	TCCCATTTAGTCTGCGTATAATTTTT	57.486	30.769	0.00	0.00	0.00	1.94
19	20	8.691661	ATCCCATTTAGTCTGCGTATAATTTT	57.308	30.769	0.00	0.00	0.00	1.82
20	21	7.117812	CGATCCCATTTAGTCTGCGTATAATTT	59.882	37.037	0.00	0.00	0.00	1.82
21	22	6.590292	CGATCCCATTTAGTCTGCGTATAATT	59.410	38.462	0.00	0.00	0.00	1.40
22	23	6.100004	CGATCCCATTTAGTCTGCGTATAAT	58.900	40.000	0.00	0.00	0.00	1.28
23	24	5.466819	CGATCCCATTTAGTCTGCGTATAA	58.533	41.667	0.00	0.00	0.00	0.98
24	25	4.082408	CCGATCCCATTTAGTCTGCGTATA	60.082	45.833	0.00	0.00	0.00	1.47
25	26	3.306088	CCGATCCCATTTAGTCTGCGTAT	60.306	47.826	0.00	0.00	0.00	3.06
26	27	2.035449	CCGATCCCATTTAGTCTGCGTA	59.965	50.000	0.00	0.00	0.00	4.42
27	28	1.202533	CCGATCCCATTTAGTCTGCGT	60.203	52.381	0.00	0.00	0.00	5.24
28	29	1.068588	TCCGATCCCATTTAGTCTGCG	59.931	52.381	0.00	0.00	0.00	5.18
29	30	2.548920	CCTCCGATCCCATTTAGTCTGC	60.549	54.545	0.00	0.00	0.00	4.26
30	31	2.037772	CCCTCCGATCCCATTTAGTCTG	59.962	54.545	0.00	0.00	0.00	3.51
31	32	2.090719	TCCCTCCGATCCCATTTAGTCT	60.091	50.000	0.00	0.00	0.00	3.24
32	33	2.300437	CTCCCTCCGATCCCATTTAGTC	59.700	54.545	0.00	0.00	0.00	2.59
33	34	2.330216	CTCCCTCCGATCCCATTTAGT	58.670	52.381	0.00	0.00	0.00	2.24
34	35	2.330216	ACTCCCTCCGATCCCATTTAG	58.670	52.381	0.00	0.00	0.00	1.85
35	36	2.489528	ACTCCCTCCGATCCCATTTA	57.510	50.000	0.00	0.00	0.00	1.40
36	37	2.047830	GTACTCCCTCCGATCCCATTT	58.952	52.381	0.00	0.00	0.00	2.32
37	38	1.062428	TGTACTCCCTCCGATCCCATT	60.062	52.381	0.00	0.00	0.00	3.16
38	39	0.561184	TGTACTCCCTCCGATCCCAT	59.439	55.000	0.00	0.00	0.00	4.00
39	40	0.561184	ATGTACTCCCTCCGATCCCA	59.439	55.000	0.00	0.00	0.00	4.37
40	41	2.599408	TATGTACTCCCTCCGATCCC	57.401	55.000	0.00	0.00	0.00	3.85
41	42	3.970842	AGATATGTACTCCCTCCGATCC	58.029	50.000	0.00	0.00	0.00	3.36
42	43	5.986501	AAAGATATGTACTCCCTCCGATC	57.013	43.478	0.00	0.00	0.00	3.69
43	44	5.246429	GGAAAAGATATGTACTCCCTCCGAT	59.754	44.000	0.00	0.00	0.00	4.18
44	45	4.587684	GGAAAAGATATGTACTCCCTCCGA	59.412	45.833	0.00	0.00	0.00	4.55
45	46	4.589374	AGGAAAAGATATGTACTCCCTCCG	59.411	45.833	0.00	0.00	0.00	4.63
46	47	6.104146	GAGGAAAAGATATGTACTCCCTCC	57.896	45.833	0.00	0.00	33.45	4.30
47	48	6.104146	GGAGGAAAAGATATGTACTCCCTC	57.896	45.833	0.00	0.00	37.62	4.30
50	51	4.908481	AGGGGAGGAAAAGATATGTACTCC	59.092	45.833	0.00	0.00	41.68	3.85
51	52	5.602978	TCAGGGGAGGAAAAGATATGTACTC	59.397	44.000	0.00	0.00	0.00	2.59
52	53	5.538877	TCAGGGGAGGAAAAGATATGTACT	58.461	41.667	0.00	0.00	0.00	2.73
53	54	5.888982	TCAGGGGAGGAAAAGATATGTAC	57.111	43.478	0.00	0.00	0.00	2.90
54	55	7.465900	AAATCAGGGGAGGAAAAGATATGTA	57.534	36.000	0.00	0.00	0.00	2.29
55	56	6.347061	AAATCAGGGGAGGAAAAGATATGT	57.653	37.500	0.00	0.00	0.00	2.29
56	57	7.666063	AAAAATCAGGGGAGGAAAAGATATG	57.334	36.000	0.00	0.00	0.00	1.78
117	121	5.008217	TGGTTTTGAGTCCACGATGTTTTAG	59.992	40.000	0.00	0.00	0.00	1.85
118	122	4.882427	TGGTTTTGAGTCCACGATGTTTTA	59.118	37.500	0.00	0.00	0.00	1.52
140	144	9.377383	CGTTTATTAAGGGCTAATTTAATCGTG	57.623	33.333	0.00	0.00	33.06	4.35
141	145	9.328845	TCGTTTATTAAGGGCTAATTTAATCGT	57.671	29.630	0.00	0.00	33.06	3.73
196	200	2.602878	CGCAAGAGTAGAACGCCTTTA	58.397	47.619	0.00	0.00	43.02	1.85
198	202	1.014564	GCGCAAGAGTAGAACGCCTT	61.015	55.000	0.30	0.00	43.58	4.35
200	204	3.081993	GCGCAAGAGTAGAACGCC	58.918	61.111	0.30	0.00	43.58	5.68
202	206	1.687494	GCTGGCGCAAGAGTAGAACG	61.687	60.000	18.24	0.00	43.02	3.95
203	207	0.670546	TGCTGGCGCAAGAGTAGAAC	60.671	55.000	18.24	0.00	44.62	3.01
204	208	1.671166	TGCTGGCGCAAGAGTAGAA	59.329	52.632	18.24	0.00	44.62	2.10
348	366	0.108945	GGCAAGCAAATCCAGACAGC	60.109	55.000	0.00	0.00	0.00	4.40
413	450	1.770061	ACGGAGGAGTAGGAGGAGTAG	59.230	57.143	0.00	0.00	0.00	2.57
444	481	1.895798	GGCAAAAGGGGGAAGAAGAAG	59.104	52.381	0.00	0.00	0.00	2.85
445	482	1.821666	CGGCAAAAGGGGGAAGAAGAA	60.822	52.381	0.00	0.00	0.00	2.52
511	548	1.484356	CTGTGCTTGTGCTTGCTTTC	58.516	50.000	0.00	0.00	40.48	2.62
672	721	1.743394	CCTCCACCTTGCGGAATAAAC	59.257	52.381	0.00	0.00	30.33	2.01
680	729	4.101448	CCCTCCCTCCACCTTGCG	62.101	72.222	0.00	0.00	0.00	4.85
921	973	1.402456	GCAAATCAGCAGCAGGAACAG	60.402	52.381	0.00	0.00	0.00	3.16
922	974	0.599558	GCAAATCAGCAGCAGGAACA	59.400	50.000	0.00	0.00	0.00	3.18
968	1020	1.893137	ACAGACAACCTATGAGCACGA	59.107	47.619	0.00	0.00	0.00	4.35
969	1021	1.995484	CACAGACAACCTATGAGCACG	59.005	52.381	0.00	0.00	0.00	5.34
994	1047	7.255070	GCCAAGGATCTGTTTAATCATCTTCTC	60.255	40.741	0.00	0.00	0.00	2.87
996	1049	6.319658	TGCCAAGGATCTGTTTAATCATCTTC	59.680	38.462	0.00	0.00	0.00	2.87
1020	1073	0.959372	CTGTCTTCTTGGGCAGCCTG	60.959	60.000	12.43	2.21	0.00	4.85
1184	1237	2.281070	CCCCATTCATCGCCGGAG	60.281	66.667	5.05	0.00	0.00	4.63
1401	1454	3.193263	CATGATGACCTCCGAGAACTTG	58.807	50.000	0.00	0.00	0.00	3.16
1413	1466	2.877168	GCTGATCTCCAACATGATGACC	59.123	50.000	4.25	0.00	0.00	4.02
1605	1658	1.310933	ATCTCTTGGCCAGCTTTGCG	61.311	55.000	5.11	0.00	0.00	4.85
1875	1928	3.057245	GGAGAAGGAACAATTTGTGCTCC	60.057	47.826	10.94	10.94	42.11	4.70
2022	2075	5.008712	GCTGTTGGTTATAGGCCAATACTTC	59.991	44.000	5.01	2.96	46.25	3.01
2046	2099	3.755378	CCAAGAACATCACCTCCTTTGAG	59.245	47.826	0.00	0.00	38.42	3.02
2351	2409	8.802267	TGTAAATCTTTTTCATAACCAGGGAAG	58.198	33.333	0.00	0.00	0.00	3.46
2356	2414	7.492344	GCCCATGTAAATCTTTTTCATAACCAG	59.508	37.037	0.00	0.00	0.00	4.00
2385	2443	0.899720	ACATCCAAGGCATGCAAAGG	59.100	50.000	21.36	16.84	0.00	3.11
2412	2470	1.085091	CCTTGTGATGCACAGAGAGC	58.915	55.000	0.00	0.00	45.39	4.09
2438	2496	5.105392	TCCCATTTGCATAGTTTAGCCAAAG	60.105	40.000	0.00	0.00	0.00	2.77
2441	2499	3.699038	GTCCCATTTGCATAGTTTAGCCA	59.301	43.478	0.00	0.00	0.00	4.75
2442	2500	3.954258	AGTCCCATTTGCATAGTTTAGCC	59.046	43.478	0.00	0.00	0.00	3.93
2443	2501	5.582689	AAGTCCCATTTGCATAGTTTAGC	57.417	39.130	0.00	0.00	0.00	3.09
2584	2881	8.177119	AGTGATAAGAAGTTGATAGCCTCTAG	57.823	38.462	0.00	0.00	0.00	2.43
2615	2926	8.579006	TGCAGTAATGTCAAGAAGAAAATGAAT	58.421	29.630	0.00	0.00	0.00	2.57
2661	2972	7.609056	CATCAGATCATTTTCTGGAAAGGTTT	58.391	34.615	0.00	0.00	42.78	3.27
2666	2977	6.183360	GGATGCATCAGATCATTTTCTGGAAA	60.183	38.462	27.25	0.00	42.78	3.13
2784	3108	7.086376	CCACATGATAAGTTCCAACTCAAAAG	58.914	38.462	0.00	0.00	38.57	2.27
2794	3118	5.352569	CAGAAGACACCACATGATAAGTTCC	59.647	44.000	0.00	0.00	0.00	3.62
3176	3514	4.969359	ACCTATGGGTGTAGCTACAGAAAT	59.031	41.667	26.70	20.00	45.43	2.17
3216	3559	5.513849	GCGCTACAGTTTAACAAACAAGTTT	59.486	36.000	0.00	0.00	43.79	2.66
3239	3582	7.247728	TGAATATTCTTTACACCGTTTCATGC	58.752	34.615	16.24	0.00	0.00	4.06
3248	3591	8.810652	TGTTTTTGCTGAATATTCTTTACACC	57.189	30.769	16.24	0.35	0.00	4.16
3280	3623	9.793259	ACAGATAAGAAGAAATGTGGAAGTTAA	57.207	29.630	0.00	0.00	0.00	2.01
3297	3642	5.023452	TCTGCCACCTAGAAACAGATAAGA	58.977	41.667	0.00	0.00	32.65	2.10
3324	3669	3.498397	CGTTGTTCCATAGAAACAGTGCT	59.502	43.478	0.00	0.00	32.58	4.40
3963	4309	2.173356	TGCTAGCTCATACAAGGGCAAT	59.827	45.455	17.23	0.00	0.00	3.56
4019	4368	7.181305	TGAGGGAGTATAACATTAGTGTTCCAA	59.819	37.037	6.91	0.00	45.14	3.53
4046	4395	8.252624	AGACTTATATTTAGGAACAGAGGGAC	57.747	38.462	0.00	0.00	0.00	4.46
4047	4396	8.855804	AAGACTTATATTTAGGAACAGAGGGA	57.144	34.615	0.00	0.00	0.00	4.20
4048	4397	9.331282	CAAAGACTTATATTTAGGAACAGAGGG	57.669	37.037	0.00	0.00	0.00	4.30
4049	4398	8.831550	GCAAAGACTTATATTTAGGAACAGAGG	58.168	37.037	0.00	0.00	0.00	3.69
4050	4399	8.543774	CGCAAAGACTTATATTTAGGAACAGAG	58.456	37.037	0.00	0.00	0.00	3.35
4051	4400	7.494625	CCGCAAAGACTTATATTTAGGAACAGA	59.505	37.037	0.00	0.00	0.00	3.41
4052	4401	7.494625	TCCGCAAAGACTTATATTTAGGAACAG	59.505	37.037	0.00	0.00	28.23	3.16
4053	4402	7.332557	TCCGCAAAGACTTATATTTAGGAACA	58.667	34.615	0.00	0.00	28.23	3.18
4054	4403	7.709613	TCTCCGCAAAGACTTATATTTAGGAAC	59.290	37.037	0.00	0.00	29.88	3.62
4055	4404	7.788026	TCTCCGCAAAGACTTATATTTAGGAA	58.212	34.615	0.00	0.00	29.88	3.36
4056	4405	7.356089	TCTCCGCAAAGACTTATATTTAGGA	57.644	36.000	0.00	0.00	0.00	2.94
4057	4406	8.608844	AATCTCCGCAAAGACTTATATTTAGG	57.391	34.615	0.00	0.00	0.00	2.69
4058	4407	8.713271	GGAATCTCCGCAAAGACTTATATTTAG	58.287	37.037	0.00	0.00	0.00	1.85
4059	4408	8.208224	TGGAATCTCCGCAAAGACTTATATTTA	58.792	33.333	0.00	0.00	40.17	1.40
4060	4409	7.054124	TGGAATCTCCGCAAAGACTTATATTT	58.946	34.615	0.00	0.00	40.17	1.40
4061	4410	6.591935	TGGAATCTCCGCAAAGACTTATATT	58.408	36.000	0.00	0.00	40.17	1.28
4062	4411	6.174720	TGGAATCTCCGCAAAGACTTATAT	57.825	37.500	0.00	0.00	40.17	0.86
4063	4412	5.607939	TGGAATCTCCGCAAAGACTTATA	57.392	39.130	0.00	0.00	40.17	0.98
4064	4413	4.487714	TGGAATCTCCGCAAAGACTTAT	57.512	40.909	0.00	0.00	40.17	1.73
4065	4414	3.973206	TGGAATCTCCGCAAAGACTTA	57.027	42.857	0.00	0.00	40.17	2.24
4066	4415	2.859165	TGGAATCTCCGCAAAGACTT	57.141	45.000	0.00	0.00	40.17	3.01
4067	4416	4.487714	TTATGGAATCTCCGCAAAGACT	57.512	40.909	0.00	0.00	40.17	3.24
4068	4417	4.023707	CCATTATGGAATCTCCGCAAAGAC	60.024	45.833	5.05	0.00	40.96	3.01
4069	4418	4.136796	CCATTATGGAATCTCCGCAAAGA	58.863	43.478	5.05	0.00	40.96	2.52
4070	4419	4.136796	TCCATTATGGAATCTCCGCAAAG	58.863	43.478	12.08	0.00	45.00	2.77
4071	4420	4.163441	TCCATTATGGAATCTCCGCAAA	57.837	40.909	12.08	0.00	45.00	3.68
4072	4421	3.855255	TCCATTATGGAATCTCCGCAA	57.145	42.857	12.08	0.00	45.00	4.85
4082	4431	5.391256	ACTCCGTATGTAGTCCATTATGGA	58.609	41.667	10.29	10.29	45.98	3.41
4083	4432	5.723672	ACTCCGTATGTAGTCCATTATGG	57.276	43.478	4.57	4.57	39.43	2.74
4084	4433	9.706691	ATTTTACTCCGTATGTAGTCCATTATG	57.293	33.333	0.00	0.00	34.86	1.90
4117	4466	9.358406	TGCATTTTAGAATGTAGATTCATCCAT	57.642	29.630	14.46	0.00	43.67	3.41
4118	4467	8.750515	TGCATTTTAGAATGTAGATTCATCCA	57.249	30.769	14.46	0.00	43.67	3.41
4119	4468	9.837525	GATGCATTTTAGAATGTAGATTCATCC	57.162	33.333	14.46	0.00	43.67	3.51
4137	4486	9.358872	CGCATACGGATATATATAGATGCATTT	57.641	33.333	19.91	0.00	38.65	2.32
4138	4487	8.917415	CGCATACGGATATATATAGATGCATT	57.083	34.615	19.91	0.00	38.65	3.56
4156	4505	2.502213	TTCACTATGGACCGCATACG	57.498	50.000	0.00	0.00	39.67	3.06
4157	4506	4.127171	ACATTTCACTATGGACCGCATAC	58.873	43.478	0.00	0.00	0.00	2.39
4158	4507	4.141824	TGACATTTCACTATGGACCGCATA	60.142	41.667	0.00	0.00	0.00	3.14
4159	4508	3.206150	GACATTTCACTATGGACCGCAT	58.794	45.455	0.00	0.00	0.00	4.73
4160	4509	2.027653	TGACATTTCACTATGGACCGCA	60.028	45.455	0.00	0.00	0.00	5.69
4161	4510	2.609459	CTGACATTTCACTATGGACCGC	59.391	50.000	0.00	0.00	0.00	5.68
4162	4511	2.609459	GCTGACATTTCACTATGGACCG	59.391	50.000	0.00	0.00	0.00	4.79
4163	4512	3.609853	TGCTGACATTTCACTATGGACC	58.390	45.455	0.00	0.00	0.00	4.46
4164	4513	5.627499	TTTGCTGACATTTCACTATGGAC	57.373	39.130	0.00	0.00	0.00	4.02
4165	4514	6.265196	AGTTTTTGCTGACATTTCACTATGGA	59.735	34.615	0.00	0.00	0.00	3.41
4166	4515	6.449698	AGTTTTTGCTGACATTTCACTATGG	58.550	36.000	0.00	0.00	0.00	2.74
4167	4516	7.436080	ACAAGTTTTTGCTGACATTTCACTATG	59.564	33.333	0.00	0.00	37.85	2.23
4168	4517	7.491682	ACAAGTTTTTGCTGACATTTCACTAT	58.508	30.769	0.00	0.00	37.85	2.12
4169	4518	6.862209	ACAAGTTTTTGCTGACATTTCACTA	58.138	32.000	0.00	0.00	37.85	2.74
4170	4519	5.723295	ACAAGTTTTTGCTGACATTTCACT	58.277	33.333	0.00	0.00	37.85	3.41
4171	4520	7.698836	ATACAAGTTTTTGCTGACATTTCAC	57.301	32.000	0.00	0.00	37.85	3.18
4172	4521	8.715191	AAATACAAGTTTTTGCTGACATTTCA	57.285	26.923	0.00	0.00	37.85	2.69
4174	4523	9.260002	CCTAAATACAAGTTTTTGCTGACATTT	57.740	29.630	0.00	0.00	37.85	2.32
4175	4524	8.637986	TCCTAAATACAAGTTTTTGCTGACATT	58.362	29.630	0.00	0.00	37.85	2.71
4176	4525	8.177119	TCCTAAATACAAGTTTTTGCTGACAT	57.823	30.769	0.00	0.00	37.85	3.06
4177	4526	7.575414	TCCTAAATACAAGTTTTTGCTGACA	57.425	32.000	0.00	0.00	37.85	3.58
4178	4527	7.918562	TGTTCCTAAATACAAGTTTTTGCTGAC	59.081	33.333	0.00	0.00	37.85	3.51
4179	4528	8.001881	TGTTCCTAAATACAAGTTTTTGCTGA	57.998	30.769	0.00	0.00	37.85	4.26
4180	4529	8.134895	TCTGTTCCTAAATACAAGTTTTTGCTG	58.865	33.333	0.00	0.00	37.85	4.41
4181	4530	8.232913	TCTGTTCCTAAATACAAGTTTTTGCT	57.767	30.769	0.00	0.00	37.85	3.91
4182	4531	7.595130	CCTCTGTTCCTAAATACAAGTTTTTGC	59.405	37.037	0.00	0.00	37.85	3.68
4183	4532	7.595130	GCCTCTGTTCCTAAATACAAGTTTTTG	59.405	37.037	0.00	0.00	40.24	2.44
4184	4533	7.505923	AGCCTCTGTTCCTAAATACAAGTTTTT	59.494	33.333	0.00	0.00	0.00	1.94
4185	4534	7.004691	AGCCTCTGTTCCTAAATACAAGTTTT	58.995	34.615	0.00	0.00	0.00	2.43
4186	4535	6.543735	AGCCTCTGTTCCTAAATACAAGTTT	58.456	36.000	0.00	0.00	0.00	2.66
4187	4536	6.128138	AGCCTCTGTTCCTAAATACAAGTT	57.872	37.500	0.00	0.00	0.00	2.66
4188	4537	5.763876	AGCCTCTGTTCCTAAATACAAGT	57.236	39.130	0.00	0.00	0.00	3.16
4194	4543	9.393786	TCCTAAATATAGCCTCTGTTCCTAAAT	57.606	33.333	0.00	0.00	0.00	1.40
4195	4544	8.792830	TCCTAAATATAGCCTCTGTTCCTAAA	57.207	34.615	0.00	0.00	0.00	1.85
4196	4545	8.792830	TTCCTAAATATAGCCTCTGTTCCTAA	57.207	34.615	0.00	0.00	0.00	2.69
4197	4546	7.455008	CCTTCCTAAATATAGCCTCTGTTCCTA	59.545	40.741	0.00	0.00	0.00	2.94
4198	4547	6.271159	CCTTCCTAAATATAGCCTCTGTTCCT	59.729	42.308	0.00	0.00	0.00	3.36
4199	4548	6.270231	TCCTTCCTAAATATAGCCTCTGTTCC	59.730	42.308	0.00	0.00	0.00	3.62
4200	4549	7.156000	GTCCTTCCTAAATATAGCCTCTGTTC	58.844	42.308	0.00	0.00	0.00	3.18
4201	4550	6.043358	GGTCCTTCCTAAATATAGCCTCTGTT	59.957	42.308	0.00	0.00	0.00	3.16
4202	4551	5.544562	GGTCCTTCCTAAATATAGCCTCTGT	59.455	44.000	0.00	0.00	0.00	3.41
4203	4552	5.782845	AGGTCCTTCCTAAATATAGCCTCTG	59.217	44.000	0.00	0.00	46.10	3.35
4204	4553	5.983608	AGGTCCTTCCTAAATATAGCCTCT	58.016	41.667	0.00	0.00	46.10	3.69
4218	4567	1.565067	TTAGGAACGGAGGTCCTTCC	58.435	55.000	12.27	14.67	40.51	3.46
4219	4568	3.908643	ATTTAGGAACGGAGGTCCTTC	57.091	47.619	12.27	0.00	35.24	3.46
4220	4569	6.614496	ACTTATATTTAGGAACGGAGGTCCTT	59.386	38.462	12.27	0.00	35.24	3.36
4221	4570	6.141790	ACTTATATTTAGGAACGGAGGTCCT	58.858	40.000	11.70	11.70	37.64	3.85
4222	4571	6.416631	ACTTATATTTAGGAACGGAGGTCC	57.583	41.667	0.00	0.00	0.00	4.46
4223	4572	6.267242	AGGACTTATATTTAGGAACGGAGGTC	59.733	42.308	0.00	0.00	0.00	3.85
4224	4573	6.141790	AGGACTTATATTTAGGAACGGAGGT	58.858	40.000	0.00	0.00	0.00	3.85
4225	4574	6.667558	AGGACTTATATTTAGGAACGGAGG	57.332	41.667	0.00	0.00	0.00	4.30
4226	4575	8.959705	AAAAGGACTTATATTTAGGAACGGAG	57.040	34.615	0.00	0.00	0.00	4.63
4255	4604	9.344309	GCTCCGTATGTAGTCTATAAAGAAATC	57.656	37.037	0.00	0.00	32.16	2.17
4256	4605	8.857098	TGCTCCGTATGTAGTCTATAAAGAAAT	58.143	33.333	0.00	0.00	32.16	2.17
4257	4606	8.229253	TGCTCCGTATGTAGTCTATAAAGAAA	57.771	34.615	0.00	0.00	32.16	2.52
4258	4607	7.812690	TGCTCCGTATGTAGTCTATAAAGAA	57.187	36.000	0.00	0.00	32.16	2.52
4259	4608	7.812690	TTGCTCCGTATGTAGTCTATAAAGA	57.187	36.000	0.00	0.00	0.00	2.52
4260	4609	8.867112	TTTTGCTCCGTATGTAGTCTATAAAG	57.133	34.615	0.00	0.00	0.00	1.85
4261	4610	9.256477	CATTTTGCTCCGTATGTAGTCTATAAA	57.744	33.333	0.00	0.00	0.00	1.40
4262	4611	8.635328	TCATTTTGCTCCGTATGTAGTCTATAA	58.365	33.333	0.00	0.00	0.00	0.98
4263	4612	8.173542	TCATTTTGCTCCGTATGTAGTCTATA	57.826	34.615	0.00	0.00	0.00	1.31
4264	4613	7.050970	TCATTTTGCTCCGTATGTAGTCTAT	57.949	36.000	0.00	0.00	0.00	1.98
4265	4614	6.096423	ACTCATTTTGCTCCGTATGTAGTCTA	59.904	38.462	0.00	0.00	0.00	2.59
4266	4615	5.105310	ACTCATTTTGCTCCGTATGTAGTCT	60.105	40.000	0.00	0.00	0.00	3.24
4267	4616	5.005779	CACTCATTTTGCTCCGTATGTAGTC	59.994	44.000	0.00	0.00	0.00	2.59
4268	4617	4.870426	CACTCATTTTGCTCCGTATGTAGT	59.130	41.667	0.00	0.00	0.00	2.73
4269	4618	5.109210	TCACTCATTTTGCTCCGTATGTAG	58.891	41.667	0.00	0.00	0.00	2.74
4270	4619	5.079689	TCACTCATTTTGCTCCGTATGTA	57.920	39.130	0.00	0.00	0.00	2.29
4271	4620	3.937814	TCACTCATTTTGCTCCGTATGT	58.062	40.909	0.00	0.00	0.00	2.29
4272	4621	4.393062	AGTTCACTCATTTTGCTCCGTATG	59.607	41.667	0.00	0.00	0.00	2.39
4273	4622	4.579869	AGTTCACTCATTTTGCTCCGTAT	58.420	39.130	0.00	0.00	0.00	3.06
4274	4623	4.002906	AGTTCACTCATTTTGCTCCGTA	57.997	40.909	0.00	0.00	0.00	4.02
4275	4624	2.851195	AGTTCACTCATTTTGCTCCGT	58.149	42.857	0.00	0.00	0.00	4.69
4276	4625	3.904136	AAGTTCACTCATTTTGCTCCG	57.096	42.857	0.00	0.00	0.00	4.63
4277	4626	7.550906	AGAGTATAAGTTCACTCATTTTGCTCC	59.449	37.037	16.02	0.00	42.99	4.70
4278	4627	8.386606	CAGAGTATAAGTTCACTCATTTTGCTC	58.613	37.037	16.02	0.00	42.99	4.26
4279	4628	8.097038	TCAGAGTATAAGTTCACTCATTTTGCT	58.903	33.333	16.02	0.00	42.99	3.91
4280	4629	8.256611	TCAGAGTATAAGTTCACTCATTTTGC	57.743	34.615	16.02	0.00	42.99	3.68
4285	4634	9.814899	CATCTTTCAGAGTATAAGTTCACTCAT	57.185	33.333	16.02	2.08	42.99	2.90
4286	4635	8.807118	ACATCTTTCAGAGTATAAGTTCACTCA	58.193	33.333	16.02	0.00	42.99	3.41
4287	4636	9.296400	GACATCTTTCAGAGTATAAGTTCACTC	57.704	37.037	8.76	8.76	41.25	3.51
4288	4637	9.030452	AGACATCTTTCAGAGTATAAGTTCACT	57.970	33.333	0.00	0.00	0.00	3.41
4320	4669	9.689976	AGATTTCACTATAGAGACATTCGAATG	57.310	33.333	31.51	31.51	42.10	2.67
4321	4670	9.906660	GAGATTTCACTATAGAGACATTCGAAT	57.093	33.333	4.39	4.39	0.00	3.34
4322	4671	9.126151	AGAGATTTCACTATAGAGACATTCGAA	57.874	33.333	6.78	0.00	0.00	3.71
4323	4672	8.684386	AGAGATTTCACTATAGAGACATTCGA	57.316	34.615	6.78	0.00	0.00	3.71
4350	4699	7.525158	TCTACTCCCTCCATTCCTAATTTTT	57.475	36.000	0.00	0.00	0.00	1.94
4351	4700	7.184753	ACTTCTACTCCCTCCATTCCTAATTTT	59.815	37.037	0.00	0.00	0.00	1.82
4352	4701	6.678857	ACTTCTACTCCCTCCATTCCTAATTT	59.321	38.462	0.00	0.00	0.00	1.82
4353	4702	6.100424	CACTTCTACTCCCTCCATTCCTAATT	59.900	42.308	0.00	0.00	0.00	1.40
4354	4703	5.604650	CACTTCTACTCCCTCCATTCCTAAT	59.395	44.000	0.00	0.00	0.00	1.73
4355	4704	4.962995	CACTTCTACTCCCTCCATTCCTAA	59.037	45.833	0.00	0.00	0.00	2.69
4356	4705	4.232122	TCACTTCTACTCCCTCCATTCCTA	59.768	45.833	0.00	0.00	0.00	2.94
4357	4706	3.012959	TCACTTCTACTCCCTCCATTCCT	59.987	47.826	0.00	0.00	0.00	3.36
4358	4707	3.375699	TCACTTCTACTCCCTCCATTCC	58.624	50.000	0.00	0.00	0.00	3.01
4359	4708	4.039852	GGATCACTTCTACTCCCTCCATTC	59.960	50.000	0.00	0.00	0.00	2.67
4360	4709	3.970640	GGATCACTTCTACTCCCTCCATT	59.029	47.826	0.00	0.00	0.00	3.16
4361	4710	3.208692	AGGATCACTTCTACTCCCTCCAT	59.791	47.826	0.00	0.00	0.00	3.41
4362	4711	2.587777	AGGATCACTTCTACTCCCTCCA	59.412	50.000	0.00	0.00	0.00	3.86
4363	4712	3.227614	GAGGATCACTTCTACTCCCTCC	58.772	54.545	0.00	0.00	34.25	4.30
4364	4713	3.888930	CTGAGGATCACTTCTACTCCCTC	59.111	52.174	0.00	0.00	42.56	4.30
4365	4714	3.373658	CCTGAGGATCACTTCTACTCCCT	60.374	52.174	0.00	0.00	42.56	4.20
4366	4715	2.962421	CCTGAGGATCACTTCTACTCCC	59.038	54.545	0.00	0.00	42.56	4.30
4367	4716	2.364002	GCCTGAGGATCACTTCTACTCC	59.636	54.545	0.65	0.00	42.56	3.85
4368	4717	3.027412	TGCCTGAGGATCACTTCTACTC	58.973	50.000	0.65	0.00	42.56	2.59
4369	4718	2.763448	GTGCCTGAGGATCACTTCTACT	59.237	50.000	0.65	0.00	42.56	2.57
4370	4719	2.480416	CGTGCCTGAGGATCACTTCTAC	60.480	54.545	0.65	0.00	42.56	2.59
4371	4720	1.751351	CGTGCCTGAGGATCACTTCTA	59.249	52.381	0.65	0.00	42.56	2.10
4372	4721	0.534412	CGTGCCTGAGGATCACTTCT	59.466	55.000	0.65	0.00	42.56	2.85
4373	4722	0.247736	ACGTGCCTGAGGATCACTTC	59.752	55.000	0.65	0.00	42.56	3.01
4374	4723	0.687354	AACGTGCCTGAGGATCACTT	59.313	50.000	0.65	0.00	42.56	3.16
4375	4724	0.247736	GAACGTGCCTGAGGATCACT	59.752	55.000	0.65	0.00	42.56	3.41
4376	4725	1.078759	CGAACGTGCCTGAGGATCAC	61.079	60.000	0.65	0.10	42.56	3.06
4378	4727	0.103208	ATCGAACGTGCCTGAGGATC	59.897	55.000	0.65	0.00	0.00	3.36
4379	4728	0.103208	GATCGAACGTGCCTGAGGAT	59.897	55.000	0.65	0.00	0.00	3.24
4380	4729	1.511305	GATCGAACGTGCCTGAGGA	59.489	57.895	0.65	0.00	0.00	3.71
4381	4730	1.519455	GGATCGAACGTGCCTGAGG	60.519	63.158	0.00	0.00	0.00	3.86
4382	4731	1.519455	GGGATCGAACGTGCCTGAG	60.519	63.158	0.00	0.00	0.00	3.35
4383	4732	2.577059	GGGATCGAACGTGCCTGA	59.423	61.111	0.00	0.00	0.00	3.86
4384	4733	2.885644	CGGGATCGAACGTGCCTG	60.886	66.667	0.00	0.00	39.00	4.85
4385	4734	4.814294	GCGGGATCGAACGTGCCT	62.814	66.667	8.86	0.00	39.00	4.75
4388	4737	4.143333	AGGGCGGGATCGAACGTG	62.143	66.667	8.86	0.00	39.00	4.49
4389	4738	3.834799	GAGGGCGGGATCGAACGT	61.835	66.667	8.86	0.00	39.00	3.99
4390	4739	3.486252	GAGAGGGCGGGATCGAACG	62.486	68.421	0.00	0.00	39.00	3.95
4391	4740	2.417936	GAGAGGGCGGGATCGAAC	59.582	66.667	0.00	0.00	39.00	3.95
4392	4741	2.838225	GGAGAGGGCGGGATCGAA	60.838	66.667	0.00	0.00	39.00	3.71
4393	4742	3.452621	ATGGAGAGGGCGGGATCGA	62.453	63.158	0.00	0.00	39.00	3.59
4394	4743	2.919856	ATGGAGAGGGCGGGATCG	60.920	66.667	0.00	0.00	39.81	3.69
4395	4744	2.143419	ACATGGAGAGGGCGGGATC	61.143	63.158	0.00	0.00	0.00	3.36
4396	4745	2.040464	ACATGGAGAGGGCGGGAT	60.040	61.111	0.00	0.00	0.00	3.85
4397	4746	3.083349	CACATGGAGAGGGCGGGA	61.083	66.667	0.00	0.00	0.00	5.14
4398	4747	2.669133	TTCACATGGAGAGGGCGGG	61.669	63.158	0.00	0.00	0.00	6.13
4399	4748	1.450312	GTTCACATGGAGAGGGCGG	60.450	63.158	0.00	0.00	0.00	6.13
4400	4749	0.824109	TAGTTCACATGGAGAGGGCG	59.176	55.000	0.00	0.00	0.00	6.13
4401	4750	2.435805	TCATAGTTCACATGGAGAGGGC	59.564	50.000	0.00	0.00	0.00	5.19
4402	4751	3.494048	GCTCATAGTTCACATGGAGAGGG	60.494	52.174	0.00	0.00	0.00	4.30
4403	4752	3.387374	AGCTCATAGTTCACATGGAGAGG	59.613	47.826	0.00	0.00	0.00	3.69
4404	4753	4.099113	TCAGCTCATAGTTCACATGGAGAG	59.901	45.833	0.00	0.00	0.00	3.20
4405	4754	4.026052	TCAGCTCATAGTTCACATGGAGA	58.974	43.478	0.00	0.00	0.00	3.71
4406	4755	4.397481	TCAGCTCATAGTTCACATGGAG	57.603	45.455	0.00	0.00	0.00	3.86
4407	4756	4.443881	CCATCAGCTCATAGTTCACATGGA	60.444	45.833	0.00	0.00	31.56	3.41
4408	4757	3.813724	CCATCAGCTCATAGTTCACATGG	59.186	47.826	0.00	0.00	0.00	3.66
4409	4758	3.250280	GCCATCAGCTCATAGTTCACATG	59.750	47.826	0.00	0.00	38.99	3.21
4410	4759	3.118149	TGCCATCAGCTCATAGTTCACAT	60.118	43.478	0.00	0.00	44.23	3.21
4411	4760	2.236893	TGCCATCAGCTCATAGTTCACA	59.763	45.455	0.00	0.00	44.23	3.58
4412	4761	2.871022	CTGCCATCAGCTCATAGTTCAC	59.129	50.000	0.00	0.00	44.23	3.18
4413	4762	2.502947	ACTGCCATCAGCTCATAGTTCA	59.497	45.455	0.00	0.00	44.10	3.18
4414	4763	3.129871	GACTGCCATCAGCTCATAGTTC	58.870	50.000	0.00	0.00	44.10	3.01
4415	4764	2.482664	CGACTGCCATCAGCTCATAGTT	60.483	50.000	0.00	0.00	44.10	2.24
4416	4765	1.068281	CGACTGCCATCAGCTCATAGT	59.932	52.381	0.00	0.00	44.10	2.12
4417	4766	1.068281	ACGACTGCCATCAGCTCATAG	59.932	52.381	0.00	0.00	44.10	2.23
4418	4767	1.114627	ACGACTGCCATCAGCTCATA	58.885	50.000	0.00	0.00	44.10	2.15
4419	4768	0.251354	AACGACTGCCATCAGCTCAT	59.749	50.000	0.00	0.00	44.10	2.90
4420	4769	0.671472	CAACGACTGCCATCAGCTCA	60.671	55.000	0.00	0.00	44.10	4.26
4421	4770	0.390340	TCAACGACTGCCATCAGCTC	60.390	55.000	0.00	0.00	44.10	4.09
4422	4771	0.251354	ATCAACGACTGCCATCAGCT	59.749	50.000	0.00	0.00	44.10	4.24
4423	4772	0.376152	CATCAACGACTGCCATCAGC	59.624	55.000	0.00	0.00	44.10	4.26
4424	4773	1.730501	ACATCAACGACTGCCATCAG	58.269	50.000	0.00	0.00	45.71	2.90
4425	4774	2.892374	CTACATCAACGACTGCCATCA	58.108	47.619	0.00	0.00	0.00	3.07
4426	4775	1.594862	GCTACATCAACGACTGCCATC	59.405	52.381	0.00	0.00	0.00	3.51
4427	4776	1.066215	TGCTACATCAACGACTGCCAT	60.066	47.619	0.00	0.00	0.00	4.40
4428	4777	0.320050	TGCTACATCAACGACTGCCA	59.680	50.000	0.00	0.00	0.00	4.92
4429	4778	1.328680	CATGCTACATCAACGACTGCC	59.671	52.381	0.00	0.00	0.00	4.85
4430	4779	1.328680	CCATGCTACATCAACGACTGC	59.671	52.381	0.00	0.00	0.00	4.40
4431	4780	1.328680	GCCATGCTACATCAACGACTG	59.671	52.381	0.00	0.00	0.00	3.51
4432	4781	1.066215	TGCCATGCTACATCAACGACT	60.066	47.619	0.00	0.00	0.00	4.18
4433	4782	1.368641	TGCCATGCTACATCAACGAC	58.631	50.000	0.00	0.00	0.00	4.34
4434	4783	2.330440	ATGCCATGCTACATCAACGA	57.670	45.000	0.00	0.00	0.00	3.85
4435	4784	3.425577	AAATGCCATGCTACATCAACG	57.574	42.857	0.00	0.00	0.00	4.10
4455	4804	7.232534	AGGATTTGCATGTAGTAGTTGGAAAAA	59.767	33.333	0.00	0.00	34.95	1.94
4456	4805	6.719370	AGGATTTGCATGTAGTAGTTGGAAAA	59.281	34.615	0.00	0.00	34.95	2.29
4457	4806	6.150976	CAGGATTTGCATGTAGTAGTTGGAAA	59.849	38.462	0.00	2.68	35.60	3.13
4458	4807	5.647658	CAGGATTTGCATGTAGTAGTTGGAA	59.352	40.000	0.00	0.00	0.00	3.53
4459	4808	5.185454	CAGGATTTGCATGTAGTAGTTGGA	58.815	41.667	0.00	0.00	0.00	3.53
4460	4809	4.336433	CCAGGATTTGCATGTAGTAGTTGG	59.664	45.833	0.00	0.00	0.00	3.77
4461	4810	4.943705	ACCAGGATTTGCATGTAGTAGTTG	59.056	41.667	0.00	0.00	0.00	3.16
4462	4811	5.179452	ACCAGGATTTGCATGTAGTAGTT	57.821	39.130	0.00	0.00	0.00	2.24
4463	4812	4.844349	ACCAGGATTTGCATGTAGTAGT	57.156	40.909	0.00	0.00	0.00	2.73
4464	4813	7.716998	AGAATTACCAGGATTTGCATGTAGTAG	59.283	37.037	0.00	0.00	0.00	2.57
4465	4814	7.573710	AGAATTACCAGGATTTGCATGTAGTA	58.426	34.615	0.00	0.00	0.00	1.82
4466	4815	6.426587	AGAATTACCAGGATTTGCATGTAGT	58.573	36.000	0.00	0.00	0.00	2.73
4467	4816	6.949352	AGAATTACCAGGATTTGCATGTAG	57.051	37.500	0.00	0.00	0.00	2.74
4468	4817	8.220755	GTAAGAATTACCAGGATTTGCATGTA	57.779	34.615	0.00	0.00	45.64	2.29
4469	4818	7.100458	GTAAGAATTACCAGGATTTGCATGT	57.900	36.000	0.00	0.00	45.64	3.21
4504	4853	3.417101	TCGAGAATTGCCAGCCTAAAAA	58.583	40.909	0.00	0.00	0.00	1.94
4505	4854	3.066291	TCGAGAATTGCCAGCCTAAAA	57.934	42.857	0.00	0.00	0.00	1.52
4506	4855	2.779755	TCGAGAATTGCCAGCCTAAA	57.220	45.000	0.00	0.00	0.00	1.85
4507	4856	2.092968	ACATCGAGAATTGCCAGCCTAA	60.093	45.455	0.00	0.00	0.00	2.69
4508	4857	1.486310	ACATCGAGAATTGCCAGCCTA	59.514	47.619	0.00	0.00	0.00	3.93
4509	4858	0.254178	ACATCGAGAATTGCCAGCCT	59.746	50.000	0.00	0.00	0.00	4.58
4510	4859	1.098050	AACATCGAGAATTGCCAGCC	58.902	50.000	0.00	0.00	0.00	4.85
4511	4860	2.523015	CAAACATCGAGAATTGCCAGC	58.477	47.619	0.00	0.00	0.00	4.85
4512	4861	2.095110	TGCAAACATCGAGAATTGCCAG	60.095	45.455	21.64	0.00	45.71	4.85
4513	4862	1.885233	TGCAAACATCGAGAATTGCCA	59.115	42.857	21.64	11.78	45.71	4.92
4514	4863	2.634982	TGCAAACATCGAGAATTGCC	57.365	45.000	21.64	10.02	45.71	4.52
4523	4872	8.525846	AAAGGATTTGTCATGATGCAAACATCG	61.526	37.037	12.26	4.42	46.22	3.84
4524	4873	6.592607	AAAGGATTTGTCATGATGCAAACATC	59.407	34.615	12.26	8.15	44.72	3.06
4525	4874	5.670792	AGGATTTGTCATGATGCAAACAT	57.329	34.783	12.26	0.00	37.41	2.71
4526	4875	5.471556	AAGGATTTGTCATGATGCAAACA	57.528	34.783	12.26	0.00	37.41	2.83
4527	4876	7.887996	TTAAAGGATTTGTCATGATGCAAAC	57.112	32.000	12.26	7.72	39.63	2.93
4528	4877	8.772705	GTTTTAAAGGATTTGTCATGATGCAAA	58.227	29.630	12.36	12.36	39.63	3.68
4529	4878	7.116090	CGTTTTAAAGGATTTGTCATGATGCAA	59.884	33.333	0.00	0.00	39.63	4.08
4530	4879	6.585702	CGTTTTAAAGGATTTGTCATGATGCA	59.414	34.615	0.00	0.00	39.63	3.96
4531	4880	6.454186	GCGTTTTAAAGGATTTGTCATGATGC	60.454	38.462	0.00	0.00	39.63	3.91
4532	4881	6.585702	TGCGTTTTAAAGGATTTGTCATGATG	59.414	34.615	0.00	0.00	39.63	3.07
4533	4882	6.586082	GTGCGTTTTAAAGGATTTGTCATGAT	59.414	34.615	0.00	0.00	39.63	2.45
4534	4883	5.918011	GTGCGTTTTAAAGGATTTGTCATGA	59.082	36.000	1.30	0.00	39.63	3.07
4535	4884	5.164196	CGTGCGTTTTAAAGGATTTGTCATG	60.164	40.000	1.30	0.00	39.63	3.07
4536	4885	4.915085	CGTGCGTTTTAAAGGATTTGTCAT	59.085	37.500	1.30	0.00	39.63	3.06
4537	4886	4.035324	TCGTGCGTTTTAAAGGATTTGTCA	59.965	37.500	1.30	0.00	39.63	3.58
4538	4887	4.377738	GTCGTGCGTTTTAAAGGATTTGTC	59.622	41.667	1.30	0.00	39.63	3.18
4539	4888	4.201930	TGTCGTGCGTTTTAAAGGATTTGT	60.202	37.500	1.30	0.00	39.63	2.83
4540	4889	4.283678	TGTCGTGCGTTTTAAAGGATTTG	58.716	39.130	1.30	0.00	39.63	2.32
4541	4890	4.555348	TGTCGTGCGTTTTAAAGGATTT	57.445	36.364	1.30	0.00	43.42	2.17
4542	4891	4.555348	TTGTCGTGCGTTTTAAAGGATT	57.445	36.364	1.30	0.00	0.00	3.01
4543	4892	4.759516	ATTGTCGTGCGTTTTAAAGGAT	57.240	36.364	1.30	0.00	0.00	3.24
4544	4893	4.555348	AATTGTCGTGCGTTTTAAAGGA	57.445	36.364	1.30	0.00	0.00	3.36
4545	4894	6.799925	AGAATAATTGTCGTGCGTTTTAAAGG	59.200	34.615	0.00	0.00	0.00	3.11
4546	4895	7.532546	TGAGAATAATTGTCGTGCGTTTTAAAG	59.467	33.333	0.00	0.00	0.00	1.85
4547	4896	7.353497	TGAGAATAATTGTCGTGCGTTTTAAA	58.647	30.769	0.00	0.00	0.00	1.52
4548	4897	6.889494	TGAGAATAATTGTCGTGCGTTTTAA	58.111	32.000	0.00	0.00	0.00	1.52
4549	4898	6.469139	TGAGAATAATTGTCGTGCGTTTTA	57.531	33.333	0.00	0.00	0.00	1.52
4550	4899	5.351233	TGAGAATAATTGTCGTGCGTTTT	57.649	34.783	0.00	0.00	0.00	2.43
4551	4900	5.323900	CATGAGAATAATTGTCGTGCGTTT	58.676	37.500	0.00	0.00	0.00	3.60
4552	4901	4.727734	GCATGAGAATAATTGTCGTGCGTT	60.728	41.667	13.10	0.00	0.00	4.84
4553	4902	3.242413	GCATGAGAATAATTGTCGTGCGT	60.242	43.478	13.10	0.00	0.00	5.24
4554	4903	3.242381	TGCATGAGAATAATTGTCGTGCG	60.242	43.478	19.81	0.00	33.07	5.34
4555	4904	4.277257	TGCATGAGAATAATTGTCGTGC	57.723	40.909	18.87	18.87	0.00	5.34
4556	4905	4.201841	TGCTGCATGAGAATAATTGTCGTG	60.202	41.667	0.00	0.00	0.00	4.35
4557	4906	3.940852	TGCTGCATGAGAATAATTGTCGT	59.059	39.130	0.00	0.00	0.00	4.34
4558	4907	4.541085	TGCTGCATGAGAATAATTGTCG	57.459	40.909	0.00	0.00	0.00	4.35
4559	4908	5.279384	CCTTGCTGCATGAGAATAATTGTC	58.721	41.667	16.19	0.00	0.00	3.18
4560	4909	4.441079	GCCTTGCTGCATGAGAATAATTGT	60.441	41.667	16.19	0.00	0.00	2.71
4561	4910	4.049186	GCCTTGCTGCATGAGAATAATTG	58.951	43.478	16.19	0.00	0.00	2.32
4562	4911	3.702548	TGCCTTGCTGCATGAGAATAATT	59.297	39.130	16.19	0.00	36.04	1.40
4563	4912	3.293337	TGCCTTGCTGCATGAGAATAAT	58.707	40.909	16.19	0.00	36.04	1.28
4564	4913	2.725637	TGCCTTGCTGCATGAGAATAA	58.274	42.857	16.19	0.00	36.04	1.40
4565	4914	2.423446	TGCCTTGCTGCATGAGAATA	57.577	45.000	16.19	0.00	36.04	1.75
4566	4915	3.276281	TGCCTTGCTGCATGAGAAT	57.724	47.368	16.19	0.00	36.04	2.40
4567	4916	4.826248	TGCCTTGCTGCATGAGAA	57.174	50.000	16.19	0.00	36.04	2.87
4573	4922	1.687660	TCAGAAAAATGCCTTGCTGCA	59.312	42.857	0.00	0.00	46.94	4.41
4574	4923	2.029649	TCTCAGAAAAATGCCTTGCTGC	60.030	45.455	0.00	0.00	0.00	5.25
4575	4924	3.928727	TCTCAGAAAAATGCCTTGCTG	57.071	42.857	0.00	0.00	0.00	4.41
4576	4925	5.479124	AAATCTCAGAAAAATGCCTTGCT	57.521	34.783	0.00	0.00	0.00	3.91
4577	4926	6.549912	AAAAATCTCAGAAAAATGCCTTGC	57.450	33.333	0.00	0.00	0.00	4.01
4597	4946	4.696479	ATTGCCCCATGTTGTGTAAAAA	57.304	36.364	0.00	0.00	0.00	1.94
4598	4947	4.696479	AATTGCCCCATGTTGTGTAAAA	57.304	36.364	0.00	0.00	0.00	1.52
4599	4948	4.696479	AAATTGCCCCATGTTGTGTAAA	57.304	36.364	0.00	0.00	0.00	2.01
4600	4949	4.696479	AAAATTGCCCCATGTTGTGTAA	57.304	36.364	0.00	0.00	0.00	2.41
4601	4950	4.696479	AAAAATTGCCCCATGTTGTGTA	57.304	36.364	0.00	0.00	0.00	2.90
4602	4951	3.574354	AAAAATTGCCCCATGTTGTGT	57.426	38.095	0.00	0.00	0.00	3.72
4603	4952	5.002516	ACATAAAAATTGCCCCATGTTGTG	58.997	37.500	0.00	0.00	0.00	3.33
4604	4953	5.240013	ACATAAAAATTGCCCCATGTTGT	57.760	34.783	0.00	0.00	0.00	3.32
4605	4954	6.638610	TCTACATAAAAATTGCCCCATGTTG	58.361	36.000	0.00	0.00	0.00	3.33
4606	4955	6.865834	TCTACATAAAAATTGCCCCATGTT	57.134	33.333	0.00	0.00	0.00	2.71
4607	4956	6.627065	CGTTCTACATAAAAATTGCCCCATGT	60.627	38.462	0.00	0.00	0.00	3.21
4608	4957	5.748152	CGTTCTACATAAAAATTGCCCCATG	59.252	40.000	0.00	0.00	0.00	3.66
4609	4958	5.420739	ACGTTCTACATAAAAATTGCCCCAT	59.579	36.000	0.00	0.00	0.00	4.00
4610	4959	4.767928	ACGTTCTACATAAAAATTGCCCCA	59.232	37.500	0.00	0.00	0.00	4.96
4611	4960	5.099575	CACGTTCTACATAAAAATTGCCCC	58.900	41.667	0.00	0.00	0.00	5.80
4612	4961	5.798434	GTCACGTTCTACATAAAAATTGCCC	59.202	40.000	0.00	0.00	0.00	5.36
4613	4962	6.375377	TGTCACGTTCTACATAAAAATTGCC	58.625	36.000	0.00	0.00	0.00	4.52
4614	4963	7.845617	TTGTCACGTTCTACATAAAAATTGC	57.154	32.000	0.00	0.00	0.00	3.56

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.