Multiple sequence alignment - TraesCS2A01G319200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G319200 chr2A 100.000 3583 0 0 1 3583 544330838 544334420 0.000000e+00 6617
1 TraesCS2A01G319200 chr2A 98.305 236 4 0 3288 3523 337878077 337877842 7.160000e-112 414
2 TraesCS2A01G319200 chr2A 98.305 236 4 0 3288 3523 351906047 351905812 7.160000e-112 414
3 TraesCS2A01G319200 chr2A 79.924 528 94 9 1936 2457 448154048 448154569 9.390000e-101 377
4 TraesCS2A01G319200 chr2A 74.765 852 179 29 1627 2457 13004101 13003265 2.050000e-92 350
5 TraesCS2A01G319200 chr2A 79.555 494 91 7 1945 2433 448293942 448293454 9.520000e-91 344
6 TraesCS2A01G319200 chr2D 93.568 2954 141 33 12 2932 406259786 406262723 0.000000e+00 4357
7 TraesCS2A01G319200 chr2D 79.961 519 92 9 1936 2448 337923985 337924497 4.370000e-99 372
8 TraesCS2A01G319200 chr2D 78.615 491 101 4 1945 2433 338330840 338330352 4.460000e-84 322
9 TraesCS2A01G319200 chr2B 91.894 2825 144 47 19 2792 481898250 481901040 0.000000e+00 3869
10 TraesCS2A01G319200 chr2B 79.640 555 101 9 1936 2484 405263244 405263792 4.340000e-104 388
11 TraesCS2A01G319200 chr2B 96.861 223 7 0 3066 3288 474908781 474908559 1.210000e-99 374
12 TraesCS2A01G319200 chr2B 91.209 91 4 2 2955 3041 481901335 481901425 1.750000e-23 121
13 TraesCS2A01G319200 chr6D 78.081 844 151 26 1702 2531 446103453 446104276 1.480000e-138 503
14 TraesCS2A01G319200 chr6D 96.861 223 7 0 3066 3288 168255254 168255032 1.210000e-99 374
15 TraesCS2A01G319200 chrUn 98.723 235 3 0 3289 3523 72463820 72463586 5.530000e-113 418
16 TraesCS2A01G319200 chrUn 97.917 240 4 1 3285 3524 123449927 123449689 7.160000e-112 414
17 TraesCS2A01G319200 chrUn 98.305 236 4 0 3288 3523 154200452 154200687 7.160000e-112 414
18 TraesCS2A01G319200 chrUn 97.309 223 6 0 3066 3288 422745383 422745161 2.610000e-101 379
19 TraesCS2A01G319200 chrUn 96.861 223 7 0 3066 3288 216518274 216518496 1.210000e-99 374
20 TraesCS2A01G319200 chr7A 97.917 240 4 1 3284 3523 416437422 416437184 7.160000e-112 414
21 TraesCS2A01G319200 chr4A 98.305 236 4 0 3288 3523 314274659 314274894 7.160000e-112 414
22 TraesCS2A01G319200 chr4A 95.455 66 2 1 3518 3583 454882723 454882659 1.760000e-18 104
23 TraesCS2A01G319200 chr1A 97.531 243 5 1 3281 3523 486233271 486233512 7.160000e-112 414
24 TraesCS2A01G319200 chr1A 97.309 223 6 0 3066 3288 554512576 554512354 2.610000e-101 379
25 TraesCS2A01G319200 chr1A 95.385 65 2 1 3519 3583 30711395 30711458 6.330000e-18 102
26 TraesCS2A01G319200 chr6A 97.458 236 6 0 3288 3523 320664555 320664320 1.550000e-108 403
27 TraesCS2A01G319200 chr6A 91.781 73 4 2 3509 3581 274683579 274683509 2.280000e-17 100
28 TraesCS2A01G319200 chr3B 97.309 223 6 0 3066 3288 201527352 201527130 2.610000e-101 379
29 TraesCS2A01G319200 chr7B 96.861 223 7 0 3066 3288 630314711 630314933 1.210000e-99 374
30 TraesCS2A01G319200 chr6B 96.861 223 7 0 3066 3288 503844433 503844211 1.210000e-99 374
31 TraesCS2A01G319200 chr5D 96.861 223 7 0 3066 3288 432403169 432403391 1.210000e-99 374
32 TraesCS2A01G319200 chr7D 80.508 236 38 8 1033 1264 25898646 25898415 1.320000e-39 174
33 TraesCS2A01G319200 chr3A 95.455 66 3 0 3518 3583 45895759 45895824 4.890000e-19 106
34 TraesCS2A01G319200 chr3A 94.030 67 4 0 3517 3583 258988129 258988195 6.330000e-18 102
35 TraesCS2A01G319200 chr5A 96.774 62 2 0 3522 3583 425618418 425618357 1.760000e-18 104
36 TraesCS2A01G319200 chr5A 95.385 65 3 0 3519 3583 682156295 682156231 1.760000e-18 104
37 TraesCS2A01G319200 chr5A 95.385 65 2 1 3519 3583 223813436 223813499 6.330000e-18 102
38 TraesCS2A01G319200 chr5A 92.754 69 5 0 3515 3583 10518039 10518107 2.280000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G319200 chr2A 544330838 544334420 3582 False 6617 6617 100.0000 1 3583 1 chr2A.!!$F2 3582
1 TraesCS2A01G319200 chr2A 448154048 448154569 521 False 377 377 79.9240 1936 2457 1 chr2A.!!$F1 521
2 TraesCS2A01G319200 chr2A 13003265 13004101 836 True 350 350 74.7650 1627 2457 1 chr2A.!!$R1 830
3 TraesCS2A01G319200 chr2D 406259786 406262723 2937 False 4357 4357 93.5680 12 2932 1 chr2D.!!$F2 2920
4 TraesCS2A01G319200 chr2D 337923985 337924497 512 False 372 372 79.9610 1936 2448 1 chr2D.!!$F1 512
5 TraesCS2A01G319200 chr2B 481898250 481901425 3175 False 1995 3869 91.5515 19 3041 2 chr2B.!!$F2 3022
6 TraesCS2A01G319200 chr2B 405263244 405263792 548 False 388 388 79.6400 1936 2484 1 chr2B.!!$F1 548
7 TraesCS2A01G319200 chr6D 446103453 446104276 823 False 503 503 78.0810 1702 2531 1 chr6D.!!$F1 829

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 973 0.535780 CAGAGGCCAGCTCAACACAA 60.536 55.0 5.01 0.00 0.00 3.33 F
1624 1683 0.603065 TACTGTGAGCATGCAGACGT 59.397 50.0 21.98 17.61 36.62 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1887 1946 0.475475 TCGGCGAGTAAGGGGAGATA 59.525 55.0 4.99 0.0 0.00 1.98 R
3140 3473 0.034089 GCACTCAAGGGTAGGGCATT 60.034 55.0 0.00 0.0 43.13 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.097954 TCCACTTATGTAGGTACGTGCG 59.902 50.000 0.00 0.00 0.00 5.34
130 132 1.446272 GTGAAAGAGGGAGACGCCG 60.446 63.158 0.00 0.00 37.63 6.46
141 143 4.278956 GACGCCGGTCTTTGTCAT 57.721 55.556 1.90 0.00 40.15 3.06
225 227 1.448540 CTCTCTTCCGTGCGCCAAT 60.449 57.895 4.18 0.00 0.00 3.16
246 248 9.289782 GCCAATACCTCTAAAAATAGACATCAT 57.710 33.333 0.00 0.00 0.00 2.45
401 405 4.667420 ACGCGAGTCGGTTGAATT 57.333 50.000 15.93 0.00 44.19 2.17
403 407 1.223187 ACGCGAGTCGGTTGAATTTT 58.777 45.000 15.93 0.00 44.19 1.82
410 414 6.084277 GCGAGTCGGTTGAATTTTAAATTCT 58.916 36.000 24.85 8.40 0.00 2.40
429 433 8.801882 AAATTCTGGTTAGTCGATATTTTGGA 57.198 30.769 0.00 0.00 0.00 3.53
433 437 7.617225 TCTGGTTAGTCGATATTTTGGAAAGA 58.383 34.615 0.00 0.00 0.00 2.52
439 443 7.214467 AGTCGATATTTTGGAAAGAAAGCAA 57.786 32.000 0.00 0.00 0.00 3.91
443 447 6.863126 CGATATTTTGGAAAGAAAGCAACAGT 59.137 34.615 0.00 0.00 0.00 3.55
444 448 7.382218 CGATATTTTGGAAAGAAAGCAACAGTT 59.618 33.333 0.00 0.00 0.00 3.16
538 544 2.320781 GACAGGAAGGAGCTATAGCCA 58.679 52.381 21.17 0.00 43.38 4.75
580 586 1.440938 TTCAAAGGTTGACGGGTGCG 61.441 55.000 0.00 0.00 39.87 5.34
641 647 1.492764 GTTTAGAGGGATGGTCGGGA 58.507 55.000 0.00 0.00 0.00 5.14
642 648 1.138464 GTTTAGAGGGATGGTCGGGAC 59.862 57.143 0.00 0.00 0.00 4.46
706 713 2.046892 CAAGGCTGACACGGGAGG 60.047 66.667 0.00 0.00 0.00 4.30
707 714 3.322466 AAGGCTGACACGGGAGGG 61.322 66.667 0.00 0.00 40.95 4.30
736 768 2.887360 GGGTGGCACATGTGATGC 59.113 61.111 29.80 14.10 44.52 3.91
745 777 1.203052 CACATGTGATGCTTTGGGGAC 59.797 52.381 21.64 0.00 0.00 4.46
771 803 1.338105 TGATCAGGACGGCAGAAAGTG 60.338 52.381 0.00 0.00 0.00 3.16
906 942 2.901839 GCCAGTCCCCTATAAATACCGA 59.098 50.000 0.00 0.00 0.00 4.69
937 973 0.535780 CAGAGGCCAGCTCAACACAA 60.536 55.000 5.01 0.00 0.00 3.33
980 1017 7.081349 TCAAGTACAGTTTTTGTGACTTTGTG 58.919 34.615 0.00 0.00 41.10 3.33
989 1026 1.077140 TGACTTTGTGCAGCCACCA 60.077 52.632 0.00 0.00 41.35 4.17
1092 1129 2.510238 ACGCCGATGCTGAAGCTC 60.510 61.111 3.61 0.00 42.66 4.09
1338 1375 3.043713 CTTGCCGAGCTCAACGCA 61.044 61.111 15.40 14.76 42.61 5.24
1341 1378 2.510238 GCCGAGCTCAACGCATCT 60.510 61.111 15.40 0.00 42.61 2.90
1353 1390 2.805546 GCATCTACCGAGTCGCCA 59.194 61.111 7.12 0.00 0.00 5.69
1465 1502 4.104143 GCGTATGCGGCTACTTGT 57.896 55.556 5.09 0.00 38.78 3.16
1526 1563 8.624776 CATCTTCCCACTCAAAGGTAATTAATC 58.375 37.037 0.00 0.00 0.00 1.75
1528 1565 6.652205 TCCCACTCAAAGGTAATTAATCCT 57.348 37.500 0.00 0.00 35.34 3.24
1569 1625 4.334118 TGCGTGCCTCAGTGCCAT 62.334 61.111 0.00 0.00 0.00 4.40
1572 1628 1.672030 CGTGCCTCAGTGCCATGAA 60.672 57.895 0.00 0.00 0.00 2.57
1573 1629 1.028330 CGTGCCTCAGTGCCATGAAT 61.028 55.000 0.00 0.00 0.00 2.57
1599 1658 6.906678 GGAATTTTTGCGGATGAATTAATTGC 59.093 34.615 5.17 3.01 0.00 3.56
1624 1683 0.603065 TACTGTGAGCATGCAGACGT 59.397 50.000 21.98 17.61 36.62 4.34
1637 1696 1.905843 AGACGTGGAGCAGCTGACT 60.906 57.895 20.43 14.36 0.00 3.41
1649 1708 3.713764 AGCAGCTGACTAATGGGTATCTT 59.286 43.478 20.43 0.00 0.00 2.40
1887 1946 2.423898 CCCGTCTACACCATCGGCT 61.424 63.158 0.00 0.00 41.38 5.52
2573 2644 4.697756 CTCTCGGGCGGCAAACCA 62.698 66.667 12.47 0.00 34.57 3.67
2656 2731 7.587629 TGAGACAAGATCTAAATTTGCAAGTG 58.412 34.615 0.00 0.00 38.00 3.16
2657 2732 6.385033 AGACAAGATCTAAATTTGCAAGTGC 58.615 36.000 0.00 0.00 35.15 4.40
2658 2733 6.208204 AGACAAGATCTAAATTTGCAAGTGCT 59.792 34.615 0.00 0.00 37.72 4.40
2659 2734 7.391554 AGACAAGATCTAAATTTGCAAGTGCTA 59.608 33.333 0.00 0.00 37.72 3.49
2732 2817 6.668541 ACTTTCTGATTTGATACATGGACG 57.331 37.500 0.00 0.00 0.00 4.79
2735 2820 4.359706 TCTGATTTGATACATGGACGTCG 58.640 43.478 9.92 0.00 0.00 5.12
2758 2843 0.529773 TCGTCTACATTGATGCCGGC 60.530 55.000 22.73 22.73 0.00 6.13
2875 3204 4.961511 AGAAGGACGCGCGCAACA 62.962 61.111 32.58 0.00 0.00 3.33
2890 3219 2.223456 CGCAACAGATGAGATCGAGACT 60.223 50.000 0.00 0.00 0.00 3.24
2925 3254 4.157120 CCCGGCCACCCTACGAAG 62.157 72.222 2.24 0.00 0.00 3.79
2927 3256 4.832608 CGGCCACCCTACGAAGCC 62.833 72.222 2.24 0.00 40.33 4.35
2929 3258 3.712907 GCCACCCTACGAAGCCCA 61.713 66.667 0.00 0.00 0.00 5.36
2931 3260 1.078426 CCACCCTACGAAGCCCAAG 60.078 63.158 0.00 0.00 0.00 3.61
2932 3261 1.745489 CACCCTACGAAGCCCAAGC 60.745 63.158 0.00 0.00 40.32 4.01
2933 3262 2.221299 ACCCTACGAAGCCCAAGCA 61.221 57.895 0.00 0.00 43.56 3.91
2934 3263 1.224592 CCCTACGAAGCCCAAGCAT 59.775 57.895 0.00 0.00 43.56 3.79
2935 3264 0.815615 CCCTACGAAGCCCAAGCATC 60.816 60.000 0.00 0.00 43.56 3.91
2939 3268 2.751436 GAAGCCCAAGCATCGCCA 60.751 61.111 0.00 0.00 43.56 5.69
2940 3269 3.056313 GAAGCCCAAGCATCGCCAC 62.056 63.158 0.00 0.00 43.56 5.01
2943 3272 3.443045 CCCAAGCATCGCCACCAC 61.443 66.667 0.00 0.00 0.00 4.16
2944 3273 2.360350 CCAAGCATCGCCACCACT 60.360 61.111 0.00 0.00 0.00 4.00
2945 3274 1.973281 CCAAGCATCGCCACCACTT 60.973 57.895 0.00 0.00 0.00 3.16
2946 3275 1.210931 CAAGCATCGCCACCACTTG 59.789 57.895 0.00 0.00 32.58 3.16
2947 3276 1.228245 AAGCATCGCCACCACTTGT 60.228 52.632 0.00 0.00 0.00 3.16
2948 3277 1.237285 AAGCATCGCCACCACTTGTC 61.237 55.000 0.00 0.00 0.00 3.18
2949 3278 2.690778 GCATCGCCACCACTTGTCC 61.691 63.158 0.00 0.00 0.00 4.02
2950 3279 2.040544 CATCGCCACCACTTGTCCC 61.041 63.158 0.00 0.00 0.00 4.46
2951 3280 3.268103 ATCGCCACCACTTGTCCCC 62.268 63.158 0.00 0.00 0.00 4.81
2952 3281 3.953775 CGCCACCACTTGTCCCCT 61.954 66.667 0.00 0.00 0.00 4.79
2953 3282 2.520968 GCCACCACTTGTCCCCTT 59.479 61.111 0.00 0.00 0.00 3.95
2965 3294 1.207089 TGTCCCCTTCTAGTGCATTCG 59.793 52.381 0.00 0.00 0.00 3.34
2967 3296 1.480954 TCCCCTTCTAGTGCATTCGTC 59.519 52.381 0.00 0.00 0.00 4.20
2968 3297 1.473434 CCCCTTCTAGTGCATTCGTCC 60.473 57.143 0.00 0.00 0.00 4.79
3027 3360 2.426752 CGCGTCGTTTTTGGCAGG 60.427 61.111 0.00 0.00 0.00 4.85
3079 3412 9.793245 GTTGACGAGAATTATATTTTACATCCG 57.207 33.333 0.00 0.00 0.00 4.18
3080 3413 9.752961 TTGACGAGAATTATATTTTACATCCGA 57.247 29.630 0.00 0.00 0.00 4.55
3081 3414 9.406828 TGACGAGAATTATATTTTACATCCGAG 57.593 33.333 0.00 0.00 0.00 4.63
3082 3415 9.622004 GACGAGAATTATATTTTACATCCGAGA 57.378 33.333 0.00 0.00 0.00 4.04
3083 3416 9.627395 ACGAGAATTATATTTTACATCCGAGAG 57.373 33.333 0.00 0.00 0.00 3.20
3099 3432 4.873746 CGAGAGGGGCTATAATTGAAGA 57.126 45.455 0.00 0.00 0.00 2.87
3100 3433 5.413309 CGAGAGGGGCTATAATTGAAGAT 57.587 43.478 0.00 0.00 0.00 2.40
3101 3434 6.531503 CGAGAGGGGCTATAATTGAAGATA 57.468 41.667 0.00 0.00 0.00 1.98
3102 3435 6.334202 CGAGAGGGGCTATAATTGAAGATAC 58.666 44.000 0.00 0.00 0.00 2.24
3103 3436 6.153680 CGAGAGGGGCTATAATTGAAGATACT 59.846 42.308 0.00 0.00 0.00 2.12
3104 3437 7.339721 CGAGAGGGGCTATAATTGAAGATACTA 59.660 40.741 0.00 0.00 0.00 1.82
3105 3438 9.207868 GAGAGGGGCTATAATTGAAGATACTAT 57.792 37.037 0.00 0.00 0.00 2.12
3106 3439 9.567702 AGAGGGGCTATAATTGAAGATACTATT 57.432 33.333 0.00 0.00 0.00 1.73
3107 3440 9.606631 GAGGGGCTATAATTGAAGATACTATTG 57.393 37.037 0.00 0.00 0.00 1.90
3108 3441 9.117223 AGGGGCTATAATTGAAGATACTATTGT 57.883 33.333 0.00 0.00 0.00 2.71
3109 3442 9.740710 GGGGCTATAATTGAAGATACTATTGTT 57.259 33.333 0.00 0.00 0.00 2.83
3126 3459 7.937649 ACTATTGTTTCTGGTACAAAAGTTCC 58.062 34.615 0.00 0.00 38.82 3.62
3127 3460 7.778382 ACTATTGTTTCTGGTACAAAAGTTCCT 59.222 33.333 0.00 0.00 38.82 3.36
3128 3461 9.280174 CTATTGTTTCTGGTACAAAAGTTCCTA 57.720 33.333 0.00 0.00 38.82 2.94
3129 3462 8.706322 ATTGTTTCTGGTACAAAAGTTCCTAT 57.294 30.769 0.00 0.00 38.82 2.57
3130 3463 9.802039 ATTGTTTCTGGTACAAAAGTTCCTATA 57.198 29.630 0.00 0.00 38.82 1.31
3131 3464 9.802039 TTGTTTCTGGTACAAAAGTTCCTATAT 57.198 29.630 0.00 0.00 38.70 0.86
3132 3465 9.444600 TGTTTCTGGTACAAAAGTTCCTATATC 57.555 33.333 0.00 0.00 38.70 1.63
3133 3466 9.444600 GTTTCTGGTACAAAAGTTCCTATATCA 57.555 33.333 0.00 0.00 38.70 2.15
3136 3469 9.613428 TCTGGTACAAAAGTTCCTATATCAATG 57.387 33.333 0.00 0.00 38.70 2.82
3137 3470 8.746052 TGGTACAAAAGTTCCTATATCAATGG 57.254 34.615 0.00 0.00 31.92 3.16
3138 3471 7.777910 TGGTACAAAAGTTCCTATATCAATGGG 59.222 37.037 0.00 0.00 32.37 4.00
3139 3472 7.996644 GGTACAAAAGTTCCTATATCAATGGGA 59.003 37.037 0.00 0.00 40.75 4.37
3156 3489 2.058593 GGAAATGCCCTACCCTTGAG 57.941 55.000 0.00 0.00 0.00 3.02
3157 3490 1.285078 GGAAATGCCCTACCCTTGAGT 59.715 52.381 0.00 0.00 0.00 3.41
3158 3491 2.369394 GAAATGCCCTACCCTTGAGTG 58.631 52.381 0.00 0.00 0.00 3.51
3159 3492 0.034089 AATGCCCTACCCTTGAGTGC 60.034 55.000 0.00 0.00 0.00 4.40
3160 3493 2.125106 GCCCTACCCTTGAGTGCG 60.125 66.667 0.00 0.00 0.00 5.34
3161 3494 2.584608 CCCTACCCTTGAGTGCGG 59.415 66.667 0.00 0.00 0.00 5.69
3162 3495 2.291043 CCCTACCCTTGAGTGCGGT 61.291 63.158 0.00 0.00 0.00 5.68
3163 3496 1.677552 CCTACCCTTGAGTGCGGTT 59.322 57.895 0.00 0.00 0.00 4.44
3164 3497 0.036306 CCTACCCTTGAGTGCGGTTT 59.964 55.000 0.00 0.00 0.00 3.27
3165 3498 1.156736 CTACCCTTGAGTGCGGTTTG 58.843 55.000 0.00 0.00 0.00 2.93
3166 3499 0.759959 TACCCTTGAGTGCGGTTTGA 59.240 50.000 0.00 0.00 0.00 2.69
3167 3500 0.106918 ACCCTTGAGTGCGGTTTGAA 60.107 50.000 0.00 0.00 0.00 2.69
3168 3501 0.310854 CCCTTGAGTGCGGTTTGAAC 59.689 55.000 0.00 0.00 0.00 3.18
3169 3502 1.308998 CCTTGAGTGCGGTTTGAACT 58.691 50.000 0.00 0.00 40.11 3.01
3170 3503 2.489971 CCTTGAGTGCGGTTTGAACTA 58.510 47.619 0.00 0.00 36.20 2.24
3171 3504 3.074412 CCTTGAGTGCGGTTTGAACTAT 58.926 45.455 0.00 0.00 36.20 2.12
3172 3505 3.502211 CCTTGAGTGCGGTTTGAACTATT 59.498 43.478 0.00 0.00 36.20 1.73
3173 3506 4.466828 CTTGAGTGCGGTTTGAACTATTG 58.533 43.478 0.00 0.00 36.20 1.90
3174 3507 3.734463 TGAGTGCGGTTTGAACTATTGA 58.266 40.909 0.00 0.00 36.20 2.57
3175 3508 4.323417 TGAGTGCGGTTTGAACTATTGAT 58.677 39.130 0.00 0.00 36.20 2.57
3176 3509 4.759693 TGAGTGCGGTTTGAACTATTGATT 59.240 37.500 0.00 0.00 36.20 2.57
3177 3510 5.240623 TGAGTGCGGTTTGAACTATTGATTT 59.759 36.000 0.00 0.00 36.20 2.17
3178 3511 6.428465 TGAGTGCGGTTTGAACTATTGATTTA 59.572 34.615 0.00 0.00 36.20 1.40
3179 3512 6.608610 AGTGCGGTTTGAACTATTGATTTAC 58.391 36.000 0.00 0.00 33.30 2.01
3180 3513 5.506832 GTGCGGTTTGAACTATTGATTTACG 59.493 40.000 0.00 0.00 0.00 3.18
3181 3514 5.179742 TGCGGTTTGAACTATTGATTTACGT 59.820 36.000 0.00 0.00 0.00 3.57
3182 3515 6.368243 TGCGGTTTGAACTATTGATTTACGTA 59.632 34.615 0.00 0.00 0.00 3.57
3183 3516 7.095313 TGCGGTTTGAACTATTGATTTACGTAA 60.095 33.333 3.29 3.29 0.00 3.18
3184 3517 7.906527 GCGGTTTGAACTATTGATTTACGTAAT 59.093 33.333 9.18 0.00 0.00 1.89
3185 3518 9.763465 CGGTTTGAACTATTGATTTACGTAATT 57.237 29.630 9.18 5.57 0.00 1.40
3225 3558 5.768927 GTTTACGACGAAACCTAGAAATCG 58.231 41.667 0.00 8.75 40.90 3.34
3226 3559 3.837213 ACGACGAAACCTAGAAATCGA 57.163 42.857 14.94 0.00 38.59 3.59
3227 3560 4.367386 ACGACGAAACCTAGAAATCGAT 57.633 40.909 14.94 0.00 38.59 3.59
3228 3561 4.349501 ACGACGAAACCTAGAAATCGATC 58.650 43.478 14.94 9.25 38.59 3.69
3229 3562 4.142534 ACGACGAAACCTAGAAATCGATCA 60.143 41.667 14.94 0.00 38.59 2.92
3230 3563 4.204573 CGACGAAACCTAGAAATCGATCAC 59.795 45.833 14.94 0.00 38.59 3.06
3231 3564 5.326200 ACGAAACCTAGAAATCGATCACT 57.674 39.130 14.94 3.94 38.59 3.41
3232 3565 5.103000 ACGAAACCTAGAAATCGATCACTG 58.897 41.667 14.94 0.00 38.59 3.66
3233 3566 5.105877 ACGAAACCTAGAAATCGATCACTGA 60.106 40.000 14.94 0.00 38.59 3.41
3234 3567 5.980116 CGAAACCTAGAAATCGATCACTGAT 59.020 40.000 0.00 0.00 37.48 2.90
3235 3568 6.143118 CGAAACCTAGAAATCGATCACTGATC 59.857 42.308 8.78 8.78 37.48 2.92
3236 3569 5.461032 ACCTAGAAATCGATCACTGATCC 57.539 43.478 12.58 0.00 35.83 3.36
3237 3570 4.895889 ACCTAGAAATCGATCACTGATCCA 59.104 41.667 12.58 1.28 35.83 3.41
3238 3571 5.363868 ACCTAGAAATCGATCACTGATCCAA 59.636 40.000 12.58 2.95 35.83 3.53
3239 3572 6.042552 ACCTAGAAATCGATCACTGATCCAAT 59.957 38.462 12.58 4.96 35.83 3.16
3240 3573 6.933521 CCTAGAAATCGATCACTGATCCAATT 59.066 38.462 12.58 9.90 35.83 2.32
3241 3574 7.443575 CCTAGAAATCGATCACTGATCCAATTT 59.556 37.037 18.41 18.41 35.83 1.82
3242 3575 7.024340 AGAAATCGATCACTGATCCAATTTG 57.976 36.000 21.09 7.14 35.83 2.32
3243 3576 6.825213 AGAAATCGATCACTGATCCAATTTGA 59.175 34.615 21.09 10.93 35.83 2.69
3244 3577 5.998454 ATCGATCACTGATCCAATTTGAC 57.002 39.130 12.58 0.00 35.83 3.18
3245 3578 5.089970 TCGATCACTGATCCAATTTGACT 57.910 39.130 12.58 0.00 35.83 3.41
3246 3579 6.220726 TCGATCACTGATCCAATTTGACTA 57.779 37.500 12.58 0.00 35.83 2.59
3247 3580 6.042777 TCGATCACTGATCCAATTTGACTAC 58.957 40.000 12.58 0.00 35.83 2.73
3248 3581 5.235186 CGATCACTGATCCAATTTGACTACC 59.765 44.000 12.58 0.00 35.83 3.18
3249 3582 5.762179 TCACTGATCCAATTTGACTACCT 57.238 39.130 0.00 0.00 0.00 3.08
3250 3583 5.734720 TCACTGATCCAATTTGACTACCTC 58.265 41.667 0.00 0.00 0.00 3.85
3251 3584 5.485353 TCACTGATCCAATTTGACTACCTCT 59.515 40.000 0.00 0.00 0.00 3.69
3252 3585 6.667848 TCACTGATCCAATTTGACTACCTCTA 59.332 38.462 0.00 0.00 0.00 2.43
3253 3586 6.758886 CACTGATCCAATTTGACTACCTCTAC 59.241 42.308 0.00 0.00 0.00 2.59
3254 3587 6.440647 ACTGATCCAATTTGACTACCTCTACA 59.559 38.462 0.00 0.00 0.00 2.74
3255 3588 6.878317 TGATCCAATTTGACTACCTCTACAG 58.122 40.000 0.00 0.00 0.00 2.74
3256 3589 5.677319 TCCAATTTGACTACCTCTACAGG 57.323 43.478 0.00 0.00 46.87 4.00
3257 3590 5.338632 TCCAATTTGACTACCTCTACAGGA 58.661 41.667 0.00 0.00 43.65 3.86
3258 3591 5.964477 TCCAATTTGACTACCTCTACAGGAT 59.036 40.000 0.00 0.00 43.65 3.24
3259 3592 7.130099 TCCAATTTGACTACCTCTACAGGATA 58.870 38.462 0.00 0.00 43.65 2.59
3260 3593 7.287927 TCCAATTTGACTACCTCTACAGGATAG 59.712 40.741 0.00 0.00 43.65 2.08
3261 3594 7.287927 CCAATTTGACTACCTCTACAGGATAGA 59.712 40.741 0.00 0.00 43.65 1.98
3262 3595 7.826918 ATTTGACTACCTCTACAGGATAGAC 57.173 40.000 0.00 0.00 43.65 2.59
3263 3596 5.307544 TGACTACCTCTACAGGATAGACC 57.692 47.826 0.00 0.00 43.65 3.85
3279 3612 7.981102 GGATAGACCTTAACAGAAAACTGTT 57.019 36.000 17.41 17.41 41.69 3.16
3280 3613 7.807680 GGATAGACCTTAACAGAAAACTGTTG 58.192 38.462 20.89 10.28 40.41 3.33
3281 3614 7.660208 GGATAGACCTTAACAGAAAACTGTTGA 59.340 37.037 20.89 14.11 40.41 3.18
3282 3615 6.927294 AGACCTTAACAGAAAACTGTTGAG 57.073 37.500 20.89 20.54 45.83 3.02
3283 3616 6.415573 AGACCTTAACAGAAAACTGTTGAGT 58.584 36.000 23.06 17.27 44.38 3.41
3284 3617 7.562135 AGACCTTAACAGAAAACTGTTGAGTA 58.438 34.615 23.06 6.65 44.38 2.59
3285 3618 8.044908 AGACCTTAACAGAAAACTGTTGAGTAA 58.955 33.333 23.06 12.02 44.38 2.24
3286 3619 7.982224 ACCTTAACAGAAAACTGTTGAGTAAC 58.018 34.615 23.06 0.00 44.38 2.50
3287 3620 7.123830 CCTTAACAGAAAACTGTTGAGTAACG 58.876 38.462 23.06 11.39 44.38 3.18
3288 3621 7.201582 CCTTAACAGAAAACTGTTGAGTAACGT 60.202 37.037 23.06 0.00 44.38 3.99
3289 3622 5.464965 ACAGAAAACTGTTGAGTAACGTG 57.535 39.130 0.00 0.00 39.71 4.49
3290 3623 5.172934 ACAGAAAACTGTTGAGTAACGTGA 58.827 37.500 0.00 0.00 39.71 4.35
3291 3624 5.815740 ACAGAAAACTGTTGAGTAACGTGAT 59.184 36.000 0.00 0.00 39.71 3.06
3292 3625 6.129393 CAGAAAACTGTTGAGTAACGTGATG 58.871 40.000 0.00 0.00 39.71 3.07
3293 3626 6.019075 CAGAAAACTGTTGAGTAACGTGATGA 60.019 38.462 0.00 0.00 39.71 2.92
3294 3627 5.907197 AAACTGTTGAGTAACGTGATGAG 57.093 39.130 0.00 0.00 39.71 2.90
3295 3628 3.914312 ACTGTTGAGTAACGTGATGAGG 58.086 45.455 0.00 0.00 39.71 3.86
3296 3629 3.572682 ACTGTTGAGTAACGTGATGAGGA 59.427 43.478 0.00 0.00 39.71 3.71
3297 3630 3.909430 TGTTGAGTAACGTGATGAGGAC 58.091 45.455 0.00 0.00 39.71 3.85
3298 3631 3.319689 TGTTGAGTAACGTGATGAGGACA 59.680 43.478 0.00 0.00 39.71 4.02
3299 3632 4.021456 TGTTGAGTAACGTGATGAGGACAT 60.021 41.667 0.00 0.00 39.71 3.06
3300 3633 4.110036 TGAGTAACGTGATGAGGACATG 57.890 45.455 0.00 0.00 36.82 3.21
3301 3634 3.761752 TGAGTAACGTGATGAGGACATGA 59.238 43.478 0.00 0.00 36.82 3.07
3302 3635 4.219725 TGAGTAACGTGATGAGGACATGAA 59.780 41.667 0.00 0.00 36.82 2.57
3303 3636 5.105351 TGAGTAACGTGATGAGGACATGAAT 60.105 40.000 0.00 0.00 36.82 2.57
3304 3637 6.096282 TGAGTAACGTGATGAGGACATGAATA 59.904 38.462 0.00 0.00 36.82 1.75
3305 3638 6.273825 AGTAACGTGATGAGGACATGAATAC 58.726 40.000 0.00 0.00 36.82 1.89
3306 3639 4.060038 ACGTGATGAGGACATGAATACC 57.940 45.455 0.00 0.00 36.82 2.73
3307 3640 3.450817 ACGTGATGAGGACATGAATACCA 59.549 43.478 0.00 0.00 36.82 3.25
3308 3641 4.101585 ACGTGATGAGGACATGAATACCAT 59.898 41.667 0.00 0.00 36.82 3.55
3309 3642 5.059161 CGTGATGAGGACATGAATACCATT 58.941 41.667 0.00 0.00 36.82 3.16
3310 3643 5.049886 CGTGATGAGGACATGAATACCATTG 60.050 44.000 0.00 0.00 36.82 2.82
3311 3644 5.824624 GTGATGAGGACATGAATACCATTGT 59.175 40.000 0.00 0.00 36.82 2.71
3312 3645 6.319658 GTGATGAGGACATGAATACCATTGTT 59.680 38.462 0.00 0.00 36.82 2.83
3313 3646 7.498900 GTGATGAGGACATGAATACCATTGTTA 59.501 37.037 0.00 0.00 36.82 2.41
3314 3647 7.498900 TGATGAGGACATGAATACCATTGTTAC 59.501 37.037 0.00 0.00 36.82 2.50
3315 3648 6.716284 TGAGGACATGAATACCATTGTTACA 58.284 36.000 0.00 0.00 31.94 2.41
3316 3649 6.597672 TGAGGACATGAATACCATTGTTACAC 59.402 38.462 0.00 0.00 31.94 2.90
3317 3650 5.885912 AGGACATGAATACCATTGTTACACC 59.114 40.000 0.00 0.00 31.94 4.16
3318 3651 5.067283 GGACATGAATACCATTGTTACACCC 59.933 44.000 0.00 0.00 31.94 4.61
3319 3652 5.575157 ACATGAATACCATTGTTACACCCA 58.425 37.500 0.00 0.00 31.94 4.51
3320 3653 5.417580 ACATGAATACCATTGTTACACCCAC 59.582 40.000 0.00 0.00 31.94 4.61
3321 3654 4.986783 TGAATACCATTGTTACACCCACA 58.013 39.130 0.00 0.00 0.00 4.17
3322 3655 5.007034 TGAATACCATTGTTACACCCACAG 58.993 41.667 0.00 0.00 0.00 3.66
3323 3656 1.616159 ACCATTGTTACACCCACAGC 58.384 50.000 0.00 0.00 0.00 4.40
3324 3657 0.887933 CCATTGTTACACCCACAGCC 59.112 55.000 0.00 0.00 0.00 4.85
3325 3658 0.887933 CATTGTTACACCCACAGCCC 59.112 55.000 0.00 0.00 0.00 5.19
3326 3659 0.480690 ATTGTTACACCCACAGCCCA 59.519 50.000 0.00 0.00 0.00 5.36
3327 3660 0.480690 TTGTTACACCCACAGCCCAT 59.519 50.000 0.00 0.00 0.00 4.00
3328 3661 0.251121 TGTTACACCCACAGCCCATG 60.251 55.000 0.00 0.00 0.00 3.66
3329 3662 1.304052 TTACACCCACAGCCCATGC 60.304 57.895 0.00 0.00 37.95 4.06
3342 3675 3.340814 GCCCATGCTGCTATACATACT 57.659 47.619 0.00 0.00 33.53 2.12
3343 3676 3.005554 GCCCATGCTGCTATACATACTG 58.994 50.000 0.00 0.00 33.53 2.74
3344 3677 3.603532 CCCATGCTGCTATACATACTGG 58.396 50.000 0.00 0.00 0.00 4.00
3345 3678 3.261643 CCCATGCTGCTATACATACTGGA 59.738 47.826 0.00 0.00 0.00 3.86
3346 3679 4.248859 CCATGCTGCTATACATACTGGAC 58.751 47.826 0.00 0.00 0.00 4.02
3347 3680 4.248859 CATGCTGCTATACATACTGGACC 58.751 47.826 0.00 0.00 0.00 4.46
3348 3681 2.296190 TGCTGCTATACATACTGGACCG 59.704 50.000 0.00 0.00 0.00 4.79
3349 3682 2.557056 GCTGCTATACATACTGGACCGA 59.443 50.000 0.00 0.00 0.00 4.69
3350 3683 3.193691 GCTGCTATACATACTGGACCGAT 59.806 47.826 0.00 0.00 0.00 4.18
3351 3684 4.322049 GCTGCTATACATACTGGACCGATT 60.322 45.833 0.00 0.00 0.00 3.34
3352 3685 5.105877 GCTGCTATACATACTGGACCGATTA 60.106 44.000 0.00 0.00 0.00 1.75
3353 3686 6.263516 TGCTATACATACTGGACCGATTAC 57.736 41.667 0.00 0.00 0.00 1.89
3354 3687 6.008331 TGCTATACATACTGGACCGATTACT 58.992 40.000 0.00 0.00 0.00 2.24
3355 3688 7.170277 TGCTATACATACTGGACCGATTACTA 58.830 38.462 0.00 0.00 0.00 1.82
3356 3689 7.336176 TGCTATACATACTGGACCGATTACTAG 59.664 40.741 0.00 0.00 0.00 2.57
3357 3690 7.551974 GCTATACATACTGGACCGATTACTAGA 59.448 40.741 0.00 0.00 0.00 2.43
3358 3691 7.925043 ATACATACTGGACCGATTACTAGAG 57.075 40.000 0.00 0.00 0.00 2.43
3359 3692 4.519730 ACATACTGGACCGATTACTAGAGC 59.480 45.833 0.00 0.00 0.00 4.09
3360 3693 3.300239 ACTGGACCGATTACTAGAGCT 57.700 47.619 0.00 0.00 0.00 4.09
3361 3694 3.215975 ACTGGACCGATTACTAGAGCTC 58.784 50.000 5.27 5.27 0.00 4.09
3362 3695 2.219458 TGGACCGATTACTAGAGCTCG 58.781 52.381 8.37 0.00 0.00 5.03
3363 3696 1.069091 GGACCGATTACTAGAGCTCGC 60.069 57.143 8.37 0.00 0.00 5.03
3364 3697 0.587285 ACCGATTACTAGAGCTCGCG 59.413 55.000 8.37 0.00 0.00 5.87
3365 3698 0.726452 CCGATTACTAGAGCTCGCGC 60.726 60.000 8.37 0.00 0.00 6.86
3366 3699 0.041224 CGATTACTAGAGCTCGCGCA 60.041 55.000 8.75 0.00 39.10 6.09
3367 3700 1.400550 GATTACTAGAGCTCGCGCAC 58.599 55.000 8.75 0.00 39.10 5.34
3368 3701 0.317103 ATTACTAGAGCTCGCGCACG 60.317 55.000 8.75 0.00 39.10 5.34
3369 3702 2.914797 TTACTAGAGCTCGCGCACGC 62.915 60.000 8.75 9.28 39.84 5.34
3376 3709 3.787676 CTCGCGCACGCCAATTGA 61.788 61.111 8.75 0.00 39.84 2.57
3377 3710 3.307505 CTCGCGCACGCCAATTGAA 62.308 57.895 8.75 0.00 39.84 2.69
3378 3711 2.202466 CGCGCACGCCAATTGAAT 60.202 55.556 8.75 0.00 37.98 2.57
3379 3712 1.801113 CGCGCACGCCAATTGAATT 60.801 52.632 8.75 0.00 37.98 2.17
3380 3713 0.522286 CGCGCACGCCAATTGAATTA 60.522 50.000 8.75 0.00 37.98 1.40
3381 3714 1.838913 GCGCACGCCAATTGAATTAT 58.161 45.000 7.12 0.00 34.56 1.28
3382 3715 1.780860 GCGCACGCCAATTGAATTATC 59.219 47.619 7.12 0.00 34.56 1.75
3383 3716 2.794282 GCGCACGCCAATTGAATTATCA 60.794 45.455 7.12 0.00 34.56 2.15
3384 3717 3.038017 CGCACGCCAATTGAATTATCAG 58.962 45.455 7.12 0.00 36.78 2.90
3385 3718 3.374745 GCACGCCAATTGAATTATCAGG 58.625 45.455 7.12 0.00 36.78 3.86
3386 3719 3.181487 GCACGCCAATTGAATTATCAGGT 60.181 43.478 7.12 0.00 36.78 4.00
3387 3720 4.036262 GCACGCCAATTGAATTATCAGGTA 59.964 41.667 7.12 0.00 36.78 3.08
3388 3721 5.510671 CACGCCAATTGAATTATCAGGTAC 58.489 41.667 7.12 0.00 36.78 3.34
3389 3722 5.296780 CACGCCAATTGAATTATCAGGTACT 59.703 40.000 7.12 0.00 43.88 2.73
3390 3723 5.885912 ACGCCAATTGAATTATCAGGTACTT 59.114 36.000 7.12 0.00 34.60 2.24
3391 3724 6.377146 ACGCCAATTGAATTATCAGGTACTTT 59.623 34.615 7.12 0.00 34.60 2.66
3392 3725 6.912591 CGCCAATTGAATTATCAGGTACTTTC 59.087 38.462 7.12 0.00 34.60 2.62
3393 3726 6.912591 GCCAATTGAATTATCAGGTACTTTCG 59.087 38.462 7.12 0.00 34.60 3.46
3394 3727 7.415206 GCCAATTGAATTATCAGGTACTTTCGT 60.415 37.037 7.12 0.00 34.60 3.85
3395 3728 8.458843 CCAATTGAATTATCAGGTACTTTCGTT 58.541 33.333 7.12 0.00 34.60 3.85
3396 3729 9.840427 CAATTGAATTATCAGGTACTTTCGTTT 57.160 29.630 0.00 0.00 34.60 3.60
3398 3731 8.842358 TTGAATTATCAGGTACTTTCGTTTCT 57.158 30.769 0.00 0.00 34.60 2.52
3399 3732 8.842358 TGAATTATCAGGTACTTTCGTTTCTT 57.158 30.769 0.00 0.00 34.60 2.52
3400 3733 8.717821 TGAATTATCAGGTACTTTCGTTTCTTG 58.282 33.333 0.00 0.00 34.60 3.02
3401 3734 7.611213 ATTATCAGGTACTTTCGTTTCTTGG 57.389 36.000 0.00 0.00 34.60 3.61
3402 3735 4.411256 TCAGGTACTTTCGTTTCTTGGT 57.589 40.909 0.00 0.00 34.60 3.67
3403 3736 5.534207 TCAGGTACTTTCGTTTCTTGGTA 57.466 39.130 0.00 0.00 34.60 3.25
3404 3737 5.916318 TCAGGTACTTTCGTTTCTTGGTAA 58.084 37.500 0.00 0.00 34.60 2.85
3405 3738 5.754890 TCAGGTACTTTCGTTTCTTGGTAAC 59.245 40.000 0.00 0.00 34.60 2.50
3406 3739 4.746611 AGGTACTTTCGTTTCTTGGTAACG 59.253 41.667 0.00 0.00 42.86 3.18
3407 3740 7.443289 CAGGTACTTTCGTTTCTTGGTAACGA 61.443 42.308 6.72 6.72 46.53 3.85
3418 3751 8.876248 GTTTCTTGGTAACGATTCTAATGTTC 57.124 34.615 0.00 0.00 42.51 3.18
3419 3752 8.500773 GTTTCTTGGTAACGATTCTAATGTTCA 58.499 33.333 0.00 0.00 42.51 3.18
3420 3753 8.786826 TTCTTGGTAACGATTCTAATGTTCAT 57.213 30.769 0.00 0.00 42.51 2.57
3421 3754 8.196802 TCTTGGTAACGATTCTAATGTTCATG 57.803 34.615 0.00 0.00 42.51 3.07
3422 3755 8.038351 TCTTGGTAACGATTCTAATGTTCATGA 58.962 33.333 0.00 0.00 42.51 3.07
3423 3756 7.770801 TGGTAACGATTCTAATGTTCATGAG 57.229 36.000 0.00 0.00 42.51 2.90
3424 3757 7.552459 TGGTAACGATTCTAATGTTCATGAGA 58.448 34.615 0.00 0.00 42.51 3.27
3425 3758 8.038351 TGGTAACGATTCTAATGTTCATGAGAA 58.962 33.333 13.11 13.11 42.51 2.87
3426 3759 9.046296 GGTAACGATTCTAATGTTCATGAGAAT 57.954 33.333 19.56 19.56 40.49 2.40
3430 3763 9.987272 ACGATTCTAATGTTCATGAGAATATGA 57.013 29.630 19.52 0.00 38.46 2.15
3434 3767 9.788889 TTCTAATGTTCATGAGAATATGATGCT 57.211 29.630 8.14 0.00 35.97 3.79
3435 3768 9.216117 TCTAATGTTCATGAGAATATGATGCTG 57.784 33.333 0.00 0.00 35.97 4.41
3436 3769 5.684550 TGTTCATGAGAATATGATGCTGC 57.315 39.130 0.00 0.00 36.97 5.25
3437 3770 4.517832 TGTTCATGAGAATATGATGCTGCC 59.482 41.667 0.00 0.00 36.97 4.85
3438 3771 4.635699 TCATGAGAATATGATGCTGCCT 57.364 40.909 0.00 0.00 32.39 4.75
3439 3772 5.750352 TCATGAGAATATGATGCTGCCTA 57.250 39.130 0.00 0.00 32.39 3.93
3440 3773 6.117975 TCATGAGAATATGATGCTGCCTAA 57.882 37.500 0.00 0.00 32.39 2.69
3441 3774 6.536447 TCATGAGAATATGATGCTGCCTAAA 58.464 36.000 0.00 0.00 32.39 1.85
3442 3775 7.173032 TCATGAGAATATGATGCTGCCTAAAT 58.827 34.615 0.00 0.00 32.39 1.40
3443 3776 7.668469 TCATGAGAATATGATGCTGCCTAAATT 59.332 33.333 0.00 0.00 32.39 1.82
3444 3777 7.210718 TGAGAATATGATGCTGCCTAAATTG 57.789 36.000 0.00 0.00 0.00 2.32
3445 3778 6.999871 TGAGAATATGATGCTGCCTAAATTGA 59.000 34.615 0.00 0.00 0.00 2.57
3446 3779 7.503230 TGAGAATATGATGCTGCCTAAATTGAA 59.497 33.333 0.00 0.00 0.00 2.69
3447 3780 8.418597 AGAATATGATGCTGCCTAAATTGAAT 57.581 30.769 0.00 0.00 0.00 2.57
3448 3781 9.524496 AGAATATGATGCTGCCTAAATTGAATA 57.476 29.630 0.00 0.00 0.00 1.75
3449 3782 9.565213 GAATATGATGCTGCCTAAATTGAATAC 57.435 33.333 0.00 0.00 0.00 1.89
3450 3783 6.964807 ATGATGCTGCCTAAATTGAATACA 57.035 33.333 0.00 0.00 0.00 2.29
3451 3784 6.964807 TGATGCTGCCTAAATTGAATACAT 57.035 33.333 0.00 0.00 0.00 2.29
3452 3785 7.350744 TGATGCTGCCTAAATTGAATACATT 57.649 32.000 0.00 0.00 0.00 2.71
3453 3786 7.784037 TGATGCTGCCTAAATTGAATACATTT 58.216 30.769 0.00 0.00 0.00 2.32
3454 3787 7.707464 TGATGCTGCCTAAATTGAATACATTTG 59.293 33.333 0.00 0.00 0.00 2.32
3455 3788 6.934056 TGCTGCCTAAATTGAATACATTTGT 58.066 32.000 0.00 0.00 0.00 2.83
3456 3789 7.385267 TGCTGCCTAAATTGAATACATTTGTT 58.615 30.769 0.00 0.00 0.00 2.83
3457 3790 7.877097 TGCTGCCTAAATTGAATACATTTGTTT 59.123 29.630 0.00 0.00 0.00 2.83
3458 3791 8.720562 GCTGCCTAAATTGAATACATTTGTTTT 58.279 29.630 0.00 0.00 0.00 2.43
3460 3793 8.502387 TGCCTAAATTGAATACATTTGTTTTGC 58.498 29.630 0.00 0.00 0.00 3.68
3461 3794 8.720562 GCCTAAATTGAATACATTTGTTTTGCT 58.279 29.630 0.00 0.00 0.00 3.91
3474 3807 6.917217 TTTGTTTTGCTTACAAATGAAGGG 57.083 33.333 7.27 0.00 44.96 3.95
3475 3808 4.376146 TGTTTTGCTTACAAATGAAGGGC 58.624 39.130 0.00 0.00 44.96 5.19
3476 3809 3.676291 TTTGCTTACAAATGAAGGGCC 57.324 42.857 0.00 0.00 40.84 5.80
3477 3810 2.603075 TGCTTACAAATGAAGGGCCT 57.397 45.000 0.00 0.00 0.00 5.19
3478 3811 3.730215 TGCTTACAAATGAAGGGCCTA 57.270 42.857 6.41 0.00 0.00 3.93
3479 3812 3.620488 TGCTTACAAATGAAGGGCCTAG 58.380 45.455 6.41 0.00 0.00 3.02
3480 3813 2.359214 GCTTACAAATGAAGGGCCTAGC 59.641 50.000 6.41 4.69 0.00 3.42
3481 3814 3.891049 CTTACAAATGAAGGGCCTAGCT 58.109 45.455 6.41 0.00 0.00 3.32
3482 3815 2.907458 ACAAATGAAGGGCCTAGCTT 57.093 45.000 6.41 0.00 0.00 3.74
3483 3816 2.450476 ACAAATGAAGGGCCTAGCTTG 58.550 47.619 6.41 11.03 0.00 4.01
3484 3817 1.753073 CAAATGAAGGGCCTAGCTTGG 59.247 52.381 6.41 10.15 0.00 3.61
3485 3818 1.298953 AATGAAGGGCCTAGCTTGGA 58.701 50.000 19.07 0.00 0.00 3.53
3486 3819 0.548510 ATGAAGGGCCTAGCTTGGAC 59.451 55.000 19.07 15.78 0.00 4.02
3487 3820 0.840288 TGAAGGGCCTAGCTTGGACA 60.840 55.000 22.18 8.09 36.67 4.02
3488 3821 0.328258 GAAGGGCCTAGCTTGGACAA 59.672 55.000 22.18 0.00 36.67 3.18
3489 3822 0.329596 AAGGGCCTAGCTTGGACAAG 59.670 55.000 22.18 7.67 36.67 3.16
3490 3823 0.547712 AGGGCCTAGCTTGGACAAGA 60.548 55.000 22.18 0.00 40.79 3.02
3491 3824 0.328258 GGGCCTAGCTTGGACAAGAA 59.672 55.000 22.18 2.35 40.79 2.52
3492 3825 1.271926 GGGCCTAGCTTGGACAAGAAA 60.272 52.381 22.18 2.01 40.79 2.52
3493 3826 2.087646 GGCCTAGCTTGGACAAGAAAG 58.912 52.381 19.07 10.67 40.79 2.62
3494 3827 2.290323 GGCCTAGCTTGGACAAGAAAGA 60.290 50.000 19.07 0.00 40.79 2.52
3495 3828 3.615155 GCCTAGCTTGGACAAGAAAGAT 58.385 45.455 19.07 0.00 40.79 2.40
3496 3829 3.376546 GCCTAGCTTGGACAAGAAAGATG 59.623 47.826 19.07 2.37 40.79 2.90
3497 3830 4.836825 CCTAGCTTGGACAAGAAAGATGA 58.163 43.478 15.76 0.00 40.79 2.92
3498 3831 5.248640 CCTAGCTTGGACAAGAAAGATGAA 58.751 41.667 15.76 0.00 40.79 2.57
3499 3832 5.123027 CCTAGCTTGGACAAGAAAGATGAAC 59.877 44.000 15.76 0.00 40.79 3.18
3500 3833 3.823304 AGCTTGGACAAGAAAGATGAACC 59.177 43.478 15.76 0.00 40.79 3.62
3501 3834 3.823304 GCTTGGACAAGAAAGATGAACCT 59.177 43.478 15.76 0.00 40.79 3.50
3502 3835 4.279420 GCTTGGACAAGAAAGATGAACCTT 59.721 41.667 15.76 0.00 40.79 3.50
3503 3836 5.766222 CTTGGACAAGAAAGATGAACCTTG 58.234 41.667 6.19 0.00 40.79 3.61
3504 3837 4.144297 TGGACAAGAAAGATGAACCTTGG 58.856 43.478 0.00 0.00 40.02 3.61
3505 3838 4.141274 TGGACAAGAAAGATGAACCTTGGA 60.141 41.667 0.00 0.00 40.02 3.53
3506 3839 4.457257 GGACAAGAAAGATGAACCTTGGAG 59.543 45.833 0.00 0.00 40.02 3.86
3507 3840 3.823304 ACAAGAAAGATGAACCTTGGAGC 59.177 43.478 0.00 0.00 40.02 4.70
3508 3841 3.795688 AGAAAGATGAACCTTGGAGCA 57.204 42.857 0.00 0.00 0.00 4.26
3509 3842 4.104383 AGAAAGATGAACCTTGGAGCAA 57.896 40.909 0.00 0.00 0.00 3.91
3510 3843 4.077822 AGAAAGATGAACCTTGGAGCAAG 58.922 43.478 0.00 0.00 40.75 4.01
3511 3844 3.515602 AAGATGAACCTTGGAGCAAGT 57.484 42.857 0.00 0.00 39.58 3.16
3512 3845 3.515602 AGATGAACCTTGGAGCAAGTT 57.484 42.857 0.00 0.00 39.58 2.66
3513 3846 3.416156 AGATGAACCTTGGAGCAAGTTC 58.584 45.455 0.00 0.00 39.58 3.01
3514 3847 2.727123 TGAACCTTGGAGCAAGTTCA 57.273 45.000 0.54 0.54 39.58 3.18
3515 3848 3.011566 TGAACCTTGGAGCAAGTTCAA 57.988 42.857 2.15 0.00 39.58 2.69
3516 3849 2.951642 TGAACCTTGGAGCAAGTTCAAG 59.048 45.455 2.15 0.00 39.58 3.02
3517 3850 1.322442 ACCTTGGAGCAAGTTCAAGC 58.678 50.000 0.00 0.00 39.58 4.01
3518 3851 1.321474 CCTTGGAGCAAGTTCAAGCA 58.679 50.000 0.00 0.00 39.58 3.91
3519 3852 1.891150 CCTTGGAGCAAGTTCAAGCAT 59.109 47.619 0.00 0.00 39.58 3.79
3520 3853 2.352421 CCTTGGAGCAAGTTCAAGCATG 60.352 50.000 0.00 0.00 39.58 4.06
3521 3854 1.250328 TGGAGCAAGTTCAAGCATGG 58.750 50.000 0.00 0.00 0.00 3.66
3522 3855 1.202915 TGGAGCAAGTTCAAGCATGGA 60.203 47.619 0.00 0.00 0.00 3.41
3523 3856 2.097825 GGAGCAAGTTCAAGCATGGAT 58.902 47.619 0.00 0.00 0.00 3.41
3524 3857 2.159282 GGAGCAAGTTCAAGCATGGATG 60.159 50.000 0.00 0.00 0.00 3.51
3525 3858 2.490903 GAGCAAGTTCAAGCATGGATGT 59.509 45.455 0.00 0.00 0.00 3.06
3526 3859 2.490903 AGCAAGTTCAAGCATGGATGTC 59.509 45.455 0.00 0.00 0.00 3.06
3527 3860 2.730090 GCAAGTTCAAGCATGGATGTCG 60.730 50.000 0.00 0.00 0.00 4.35
3528 3861 1.742761 AGTTCAAGCATGGATGTCGG 58.257 50.000 0.00 0.00 0.00 4.79
3529 3862 1.278985 AGTTCAAGCATGGATGTCGGA 59.721 47.619 0.00 0.00 0.00 4.55
3530 3863 1.667724 GTTCAAGCATGGATGTCGGAG 59.332 52.381 0.00 0.00 0.00 4.63
3531 3864 0.904649 TCAAGCATGGATGTCGGAGT 59.095 50.000 0.00 0.00 0.00 3.85
3532 3865 2.107366 TCAAGCATGGATGTCGGAGTA 58.893 47.619 0.00 0.00 0.00 2.59
3533 3866 2.499693 TCAAGCATGGATGTCGGAGTAA 59.500 45.455 0.00 0.00 0.00 2.24
3534 3867 3.055458 TCAAGCATGGATGTCGGAGTAAA 60.055 43.478 0.00 0.00 0.00 2.01
3535 3868 3.845781 AGCATGGATGTCGGAGTAAAT 57.154 42.857 0.00 0.00 0.00 1.40
3536 3869 4.955811 AGCATGGATGTCGGAGTAAATA 57.044 40.909 0.00 0.00 0.00 1.40
3537 3870 4.887748 AGCATGGATGTCGGAGTAAATAG 58.112 43.478 0.00 0.00 0.00 1.73
3538 3871 4.345257 AGCATGGATGTCGGAGTAAATAGT 59.655 41.667 0.00 0.00 0.00 2.12
3539 3872 4.686554 GCATGGATGTCGGAGTAAATAGTC 59.313 45.833 0.00 0.00 0.00 2.59
3540 3873 5.739070 GCATGGATGTCGGAGTAAATAGTCA 60.739 44.000 0.00 0.00 0.00 3.41
3541 3874 6.459066 CATGGATGTCGGAGTAAATAGTCAT 58.541 40.000 0.00 0.00 0.00 3.06
3542 3875 5.842907 TGGATGTCGGAGTAAATAGTCATG 58.157 41.667 0.00 0.00 0.00 3.07
3543 3876 5.221441 TGGATGTCGGAGTAAATAGTCATGG 60.221 44.000 0.00 0.00 0.00 3.66
3544 3877 4.665833 TGTCGGAGTAAATAGTCATGGG 57.334 45.455 0.00 0.00 0.00 4.00
3545 3878 4.028131 TGTCGGAGTAAATAGTCATGGGT 58.972 43.478 0.00 0.00 0.00 4.51
3546 3879 5.202765 TGTCGGAGTAAATAGTCATGGGTA 58.797 41.667 0.00 0.00 0.00 3.69
3547 3880 5.301045 TGTCGGAGTAAATAGTCATGGGTAG 59.699 44.000 0.00 0.00 0.00 3.18
3548 3881 4.280174 TCGGAGTAAATAGTCATGGGTAGC 59.720 45.833 0.00 0.00 0.00 3.58
3549 3882 4.560919 CGGAGTAAATAGTCATGGGTAGCC 60.561 50.000 3.29 3.29 0.00 3.93
3550 3883 4.593634 GGAGTAAATAGTCATGGGTAGCCT 59.406 45.833 13.11 0.00 0.00 4.58
3551 3884 5.778750 GGAGTAAATAGTCATGGGTAGCCTA 59.221 44.000 13.11 0.00 0.00 3.93
3552 3885 6.071278 GGAGTAAATAGTCATGGGTAGCCTAG 60.071 46.154 13.11 4.70 0.00 3.02
3553 3886 4.625607 AAATAGTCATGGGTAGCCTAGC 57.374 45.455 13.11 0.00 0.00 3.42
3554 3887 2.011122 TAGTCATGGGTAGCCTAGCC 57.989 55.000 13.11 13.11 46.36 3.93
3565 3898 3.866582 CCTAGCCGGCTTCCCCTG 61.867 72.222 37.74 16.97 0.00 4.45
3566 3899 3.866582 CTAGCCGGCTTCCCCTGG 61.867 72.222 37.74 7.27 0.00 4.45
3572 3905 4.448976 GGCTTCCCCTGGCCCTTC 62.449 72.222 0.00 0.00 42.30 3.46
3573 3906 3.342477 GCTTCCCCTGGCCCTTCT 61.342 66.667 0.00 0.00 0.00 2.85
3574 3907 2.679716 CTTCCCCTGGCCCTTCTG 59.320 66.667 0.00 0.00 0.00 3.02
3575 3908 1.925455 CTTCCCCTGGCCCTTCTGA 60.925 63.158 0.00 0.00 0.00 3.27
3576 3909 1.465188 TTCCCCTGGCCCTTCTGAA 60.465 57.895 0.00 0.00 0.00 3.02
3577 3910 1.500783 TTCCCCTGGCCCTTCTGAAG 61.501 60.000 10.46 10.46 0.00 3.02
3578 3911 1.925455 CCCCTGGCCCTTCTGAAGA 60.925 63.158 18.68 0.00 0.00 2.87
3579 3912 1.500783 CCCCTGGCCCTTCTGAAGAA 61.501 60.000 18.68 0.00 0.00 2.52
3580 3913 0.405585 CCCTGGCCCTTCTGAAGAAA 59.594 55.000 18.68 0.83 33.07 2.52
3581 3914 1.006400 CCCTGGCCCTTCTGAAGAAAT 59.994 52.381 18.68 0.00 33.07 2.17
3582 3915 2.558350 CCCTGGCCCTTCTGAAGAAATT 60.558 50.000 18.68 0.00 33.07 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.456989 CGCACGTACCTACATAAGTGG 58.543 52.381 0.00 0.00 35.74 4.00
3 4 2.159338 ACCGCACGTACCTACATAAGTG 60.159 50.000 0.00 0.00 37.53 3.16
4 5 2.094675 ACCGCACGTACCTACATAAGT 58.905 47.619 0.00 0.00 0.00 2.24
5 6 2.857592 ACCGCACGTACCTACATAAG 57.142 50.000 0.00 0.00 0.00 1.73
6 7 2.031560 CGTACCGCACGTACCTACATAA 59.968 50.000 5.70 0.00 43.93 1.90
7 8 1.597195 CGTACCGCACGTACCTACATA 59.403 52.381 5.70 0.00 43.93 2.29
8 9 0.378257 CGTACCGCACGTACCTACAT 59.622 55.000 5.70 0.00 43.93 2.29
22 23 1.454653 GAACAAAGAGTCGCACGTACC 59.545 52.381 0.00 0.00 0.00 3.34
246 248 1.048601 AGTTGTCGCCCTCTTTCTGA 58.951 50.000 0.00 0.00 0.00 3.27
340 343 3.549221 GCTAGTGTATGAAGAGCGACTCC 60.549 52.174 3.66 0.00 0.00 3.85
403 407 9.893634 TCCAAAATATCGACTAACCAGAATTTA 57.106 29.630 0.00 0.00 0.00 1.40
410 414 8.624367 TTTCTTTCCAAAATATCGACTAACCA 57.376 30.769 0.00 0.00 0.00 3.67
422 426 6.667007 CAACTGTTGCTTTCTTTCCAAAAT 57.333 33.333 7.70 0.00 0.00 1.82
447 451 2.758327 TATGGCCTCGTGCTCCGT 60.758 61.111 3.32 0.00 40.92 4.69
620 626 1.200519 CCGACCATCCCTCTAAACCA 58.799 55.000 0.00 0.00 0.00 3.67
669 676 3.075005 GCACCGCCCTCCTCACTA 61.075 66.667 0.00 0.00 0.00 2.74
719 751 1.252904 AAGCATCACATGTGCCACCC 61.253 55.000 21.38 7.25 43.50 4.61
733 765 1.281867 TCATCTTCGTCCCCAAAGCAT 59.718 47.619 0.00 0.00 0.00 3.79
736 768 3.201290 CTGATCATCTTCGTCCCCAAAG 58.799 50.000 0.00 0.00 0.00 2.77
745 777 0.103026 TGCCGTCCTGATCATCTTCG 59.897 55.000 0.00 0.00 0.00 3.79
754 786 1.118965 TCCACTTTCTGCCGTCCTGA 61.119 55.000 0.00 0.00 0.00 3.86
771 803 3.597550 GGCTAGATCGCCTTCTTCC 57.402 57.895 4.50 0.00 46.63 3.46
924 960 0.518636 CGATGGTTGTGTTGAGCTGG 59.481 55.000 0.00 0.00 0.00 4.85
937 973 1.202758 TGAAGTCCAAGTTGCGATGGT 60.203 47.619 0.00 0.00 37.94 3.55
965 1001 2.028658 TGGCTGCACAAAGTCACAAAAA 60.029 40.909 0.50 0.00 0.00 1.94
980 1017 2.554272 CGTTACGTTGGTGGCTGC 59.446 61.111 0.00 0.00 0.00 5.25
989 1026 0.956902 GGAACCCATGCCGTTACGTT 60.957 55.000 3.52 0.00 0.00 3.99
1092 1129 1.817099 GCAGTGGAGGATCTTGGCG 60.817 63.158 0.00 0.00 33.73 5.69
1195 1232 2.125633 GAAGCGGAACCCCTCGAC 60.126 66.667 0.00 0.00 0.00 4.20
1338 1375 2.478890 CGGTGGCGACTCGGTAGAT 61.479 63.158 0.00 0.00 0.00 1.98
1452 1489 0.462047 GGTAGCACAAGTAGCCGCAT 60.462 55.000 0.00 0.00 0.00 4.73
1569 1625 4.797800 TCATCCGCAAAAATTCCATTCA 57.202 36.364 0.00 0.00 0.00 2.57
1572 1628 8.614346 CAATTAATTCATCCGCAAAAATTCCAT 58.386 29.630 0.00 0.00 0.00 3.41
1573 1629 7.413877 GCAATTAATTCATCCGCAAAAATTCCA 60.414 33.333 0.00 0.00 0.00 3.53
1624 1683 0.543277 CCCATTAGTCAGCTGCTCCA 59.457 55.000 9.47 0.97 0.00 3.86
1637 1696 2.482316 CGGCGTGTCAAGATACCCATTA 60.482 50.000 0.00 0.00 0.00 1.90
1649 1708 4.293648 CAGTCCACCGGCGTGTCA 62.294 66.667 6.01 0.00 38.41 3.58
1667 1726 4.776322 TTGCTCATCCCCGCCGTG 62.776 66.667 0.00 0.00 0.00 4.94
1887 1946 0.475475 TCGGCGAGTAAGGGGAGATA 59.525 55.000 4.99 0.00 0.00 1.98
1940 2008 0.991355 TCCACAGGTTTGACCCCAGT 60.991 55.000 0.00 0.00 39.75 4.00
2036 2104 0.670546 CCTCGTTGCTCATCACCGTT 60.671 55.000 0.00 0.00 32.10 4.44
2605 2676 8.385111 AGTAACCAATTTGAAATACGTACGATG 58.615 33.333 24.41 4.68 0.00 3.84
2656 2731 6.369340 TGAACGTATAGTATGAGAGAGCTAGC 59.631 42.308 6.62 6.62 0.00 3.42
2657 2732 7.892778 TGAACGTATAGTATGAGAGAGCTAG 57.107 40.000 0.00 0.00 0.00 3.42
2658 2733 7.095732 CGTTGAACGTATAGTATGAGAGAGCTA 60.096 40.741 9.94 0.00 36.74 3.32
2659 2734 6.292973 CGTTGAACGTATAGTATGAGAGAGCT 60.293 42.308 9.94 0.00 36.74 4.09
2732 2817 3.241678 GCATCAATGTAGACGACAACGAC 60.242 47.826 0.00 0.00 42.78 4.34
2735 2820 2.029244 CGGCATCAATGTAGACGACAAC 59.971 50.000 0.00 0.00 42.78 3.32
2758 2843 3.992260 ATCAGGAATAGACCTTCGTCG 57.008 47.619 0.00 0.00 44.28 5.12
2833 3162 3.112126 GATCCGCACGGCACCATTG 62.112 63.158 3.66 0.00 34.68 2.82
2875 3204 2.290367 CGCAAGAGTCTCGATCTCATCT 59.710 50.000 16.38 1.49 43.02 2.90
2909 3238 4.832608 GCTTCGTAGGGTGGCCGG 62.833 72.222 0.00 0.00 0.00 6.13
2923 3252 3.064324 GTGGCGATGCTTGGGCTT 61.064 61.111 9.35 0.00 39.59 4.35
2927 3256 1.973281 AAGTGGTGGCGATGCTTGG 60.973 57.895 0.00 0.00 0.00 3.61
2929 3258 1.228245 ACAAGTGGTGGCGATGCTT 60.228 52.632 0.00 0.00 0.00 3.91
2931 3260 2.690778 GGACAAGTGGTGGCGATGC 61.691 63.158 0.00 0.00 35.23 3.91
2932 3261 2.040544 GGGACAAGTGGTGGCGATG 61.041 63.158 0.00 0.00 35.23 3.84
2933 3262 2.351276 GGGACAAGTGGTGGCGAT 59.649 61.111 0.00 0.00 35.23 4.58
2934 3263 3.948719 GGGGACAAGTGGTGGCGA 61.949 66.667 0.00 0.00 35.23 5.54
2935 3264 3.491598 AAGGGGACAAGTGGTGGCG 62.492 63.158 0.00 0.00 35.23 5.69
2936 3265 1.603739 GAAGGGGACAAGTGGTGGC 60.604 63.158 0.00 0.00 0.00 5.01
2937 3266 1.279271 CTAGAAGGGGACAAGTGGTGG 59.721 57.143 0.00 0.00 0.00 4.61
2938 3267 1.978580 ACTAGAAGGGGACAAGTGGTG 59.021 52.381 0.00 0.00 0.00 4.17
2939 3268 1.978580 CACTAGAAGGGGACAAGTGGT 59.021 52.381 0.00 0.00 35.12 4.16
2940 3269 1.339151 GCACTAGAAGGGGACAAGTGG 60.339 57.143 0.00 0.00 38.36 4.00
2941 3270 1.347707 TGCACTAGAAGGGGACAAGTG 59.652 52.381 0.00 0.00 40.38 3.16
2942 3271 1.729586 TGCACTAGAAGGGGACAAGT 58.270 50.000 0.00 0.00 0.00 3.16
2943 3272 3.274288 GAATGCACTAGAAGGGGACAAG 58.726 50.000 0.00 0.00 0.00 3.16
2944 3273 2.354704 CGAATGCACTAGAAGGGGACAA 60.355 50.000 0.00 0.00 0.00 3.18
2945 3274 1.207089 CGAATGCACTAGAAGGGGACA 59.793 52.381 0.00 0.00 0.00 4.02
2946 3275 1.207329 ACGAATGCACTAGAAGGGGAC 59.793 52.381 0.00 0.00 0.00 4.46
2947 3276 1.480954 GACGAATGCACTAGAAGGGGA 59.519 52.381 0.00 0.00 0.00 4.81
2948 3277 1.473434 GGACGAATGCACTAGAAGGGG 60.473 57.143 0.00 0.00 0.00 4.79
2949 3278 1.473434 GGGACGAATGCACTAGAAGGG 60.473 57.143 0.00 0.00 0.00 3.95
2950 3279 1.482593 AGGGACGAATGCACTAGAAGG 59.517 52.381 0.00 0.00 0.00 3.46
2951 3280 2.969628 AGGGACGAATGCACTAGAAG 57.030 50.000 0.00 0.00 0.00 2.85
2952 3281 4.202223 GGATAAGGGACGAATGCACTAGAA 60.202 45.833 0.00 0.00 0.00 2.10
2953 3282 3.321111 GGATAAGGGACGAATGCACTAGA 59.679 47.826 0.00 0.00 0.00 2.43
2965 3294 7.603024 GCTAGTACAATACAATGGATAAGGGAC 59.397 40.741 0.00 0.00 0.00 4.46
2967 3296 6.590292 CGCTAGTACAATACAATGGATAAGGG 59.410 42.308 0.00 0.00 0.00 3.95
2968 3297 6.590292 CCGCTAGTACAATACAATGGATAAGG 59.410 42.308 0.00 0.00 0.00 2.69
3053 3386 9.793245 CGGATGTAAAATATAATTCTCGTCAAC 57.207 33.333 0.00 0.00 0.00 3.18
3054 3387 9.752961 TCGGATGTAAAATATAATTCTCGTCAA 57.247 29.630 0.00 0.00 0.00 3.18
3055 3388 9.406828 CTCGGATGTAAAATATAATTCTCGTCA 57.593 33.333 0.00 0.00 0.00 4.35
3056 3389 9.622004 TCTCGGATGTAAAATATAATTCTCGTC 57.378 33.333 0.00 0.00 0.00 4.20
3057 3390 9.627395 CTCTCGGATGTAAAATATAATTCTCGT 57.373 33.333 0.00 0.00 0.00 4.18
3058 3391 9.077674 CCTCTCGGATGTAAAATATAATTCTCG 57.922 37.037 0.00 0.00 0.00 4.04
3059 3392 9.372369 CCCTCTCGGATGTAAAATATAATTCTC 57.628 37.037 0.00 0.00 0.00 2.87
3060 3393 8.322091 CCCCTCTCGGATGTAAAATATAATTCT 58.678 37.037 0.00 0.00 0.00 2.40
3061 3394 7.065923 GCCCCTCTCGGATGTAAAATATAATTC 59.934 40.741 0.00 0.00 0.00 2.17
3062 3395 6.884836 GCCCCTCTCGGATGTAAAATATAATT 59.115 38.462 0.00 0.00 0.00 1.40
3063 3396 6.215636 AGCCCCTCTCGGATGTAAAATATAAT 59.784 38.462 0.00 0.00 0.00 1.28
3064 3397 5.546499 AGCCCCTCTCGGATGTAAAATATAA 59.454 40.000 0.00 0.00 0.00 0.98
3065 3398 5.091552 AGCCCCTCTCGGATGTAAAATATA 58.908 41.667 0.00 0.00 0.00 0.86
3066 3399 3.910627 AGCCCCTCTCGGATGTAAAATAT 59.089 43.478 0.00 0.00 0.00 1.28
3067 3400 3.314693 AGCCCCTCTCGGATGTAAAATA 58.685 45.455 0.00 0.00 0.00 1.40
3068 3401 2.127708 AGCCCCTCTCGGATGTAAAAT 58.872 47.619 0.00 0.00 0.00 1.82
3069 3402 1.580059 AGCCCCTCTCGGATGTAAAA 58.420 50.000 0.00 0.00 0.00 1.52
3070 3403 2.464796 TAGCCCCTCTCGGATGTAAA 57.535 50.000 0.00 0.00 0.00 2.01
3071 3404 2.696526 ATAGCCCCTCTCGGATGTAA 57.303 50.000 0.00 0.00 0.00 2.41
3072 3405 3.820195 TTATAGCCCCTCTCGGATGTA 57.180 47.619 0.00 0.00 0.00 2.29
3073 3406 2.696526 TTATAGCCCCTCTCGGATGT 57.303 50.000 0.00 0.00 0.00 3.06
3074 3407 3.515502 TCAATTATAGCCCCTCTCGGATG 59.484 47.826 0.00 0.00 0.00 3.51
3075 3408 3.791320 TCAATTATAGCCCCTCTCGGAT 58.209 45.455 0.00 0.00 0.00 4.18
3076 3409 3.254093 TCAATTATAGCCCCTCTCGGA 57.746 47.619 0.00 0.00 0.00 4.55
3077 3410 3.578716 TCTTCAATTATAGCCCCTCTCGG 59.421 47.826 0.00 0.00 0.00 4.63
3078 3411 4.873746 TCTTCAATTATAGCCCCTCTCG 57.126 45.455 0.00 0.00 0.00 4.04
3079 3412 7.489239 AGTATCTTCAATTATAGCCCCTCTC 57.511 40.000 0.00 0.00 0.00 3.20
3080 3413 9.567702 AATAGTATCTTCAATTATAGCCCCTCT 57.432 33.333 0.00 0.00 0.00 3.69
3081 3414 9.606631 CAATAGTATCTTCAATTATAGCCCCTC 57.393 37.037 0.00 0.00 0.00 4.30
3082 3415 9.117223 ACAATAGTATCTTCAATTATAGCCCCT 57.883 33.333 0.00 0.00 0.00 4.79
3083 3416 9.740710 AACAATAGTATCTTCAATTATAGCCCC 57.259 33.333 0.00 0.00 0.00 5.80
3100 3433 9.059260 GGAACTTTTGTACCAGAAACAATAGTA 57.941 33.333 10.87 0.00 43.63 1.82
3101 3434 7.778382 AGGAACTTTTGTACCAGAAACAATAGT 59.222 33.333 6.33 6.33 45.17 2.12
3102 3435 8.166422 AGGAACTTTTGTACCAGAAACAATAG 57.834 34.615 5.30 5.30 39.97 1.73
3103 3436 9.802039 ATAGGAACTTTTGTACCAGAAACAATA 57.198 29.630 0.00 0.00 41.75 1.90
3104 3437 8.706322 ATAGGAACTTTTGTACCAGAAACAAT 57.294 30.769 0.00 0.00 41.75 2.71
3105 3438 9.802039 ATATAGGAACTTTTGTACCAGAAACAA 57.198 29.630 0.00 0.00 41.75 2.83
3106 3439 9.444600 GATATAGGAACTTTTGTACCAGAAACA 57.555 33.333 0.00 0.00 41.75 2.83
3107 3440 9.444600 TGATATAGGAACTTTTGTACCAGAAAC 57.555 33.333 0.00 0.00 41.75 2.78
3110 3443 9.613428 CATTGATATAGGAACTTTTGTACCAGA 57.387 33.333 0.00 0.00 41.75 3.86
3111 3444 8.840321 CCATTGATATAGGAACTTTTGTACCAG 58.160 37.037 0.00 0.00 41.75 4.00
3112 3445 7.777910 CCCATTGATATAGGAACTTTTGTACCA 59.222 37.037 0.00 0.00 41.75 3.25
3113 3446 7.996644 TCCCATTGATATAGGAACTTTTGTACC 59.003 37.037 0.00 0.00 41.75 3.34
3114 3447 8.974060 TCCCATTGATATAGGAACTTTTGTAC 57.026 34.615 0.00 0.00 41.75 2.90
3115 3448 9.983024 TTTCCCATTGATATAGGAACTTTTGTA 57.017 29.630 0.00 0.00 41.75 2.41
3116 3449 8.893563 TTTCCCATTGATATAGGAACTTTTGT 57.106 30.769 0.00 0.00 41.75 2.83
3117 3450 9.754382 CATTTCCCATTGATATAGGAACTTTTG 57.246 33.333 0.00 0.00 41.75 2.44
3118 3451 8.424133 GCATTTCCCATTGATATAGGAACTTTT 58.576 33.333 0.00 0.00 41.75 2.27
3119 3452 7.015584 GGCATTTCCCATTGATATAGGAACTTT 59.984 37.037 0.00 0.00 41.75 2.66
3120 3453 6.494835 GGCATTTCCCATTGATATAGGAACTT 59.505 38.462 0.00 0.00 41.75 2.66
3121 3454 6.012745 GGCATTTCCCATTGATATAGGAACT 58.987 40.000 0.00 0.00 46.37 3.01
3122 3455 6.272822 GGCATTTCCCATTGATATAGGAAC 57.727 41.667 0.00 0.00 38.10 3.62
3137 3470 1.285078 ACTCAAGGGTAGGGCATTTCC 59.715 52.381 0.00 0.00 0.00 3.13
3138 3471 2.369394 CACTCAAGGGTAGGGCATTTC 58.631 52.381 0.00 0.00 0.00 2.17
3139 3472 1.616994 GCACTCAAGGGTAGGGCATTT 60.617 52.381 0.00 0.00 43.13 2.32
3140 3473 0.034089 GCACTCAAGGGTAGGGCATT 60.034 55.000 0.00 0.00 43.13 3.56
3141 3474 1.609783 GCACTCAAGGGTAGGGCAT 59.390 57.895 0.00 0.00 43.13 4.40
3142 3475 2.954684 CGCACTCAAGGGTAGGGCA 61.955 63.158 0.00 0.00 43.86 5.36
3143 3476 2.125106 CGCACTCAAGGGTAGGGC 60.125 66.667 0.00 0.00 40.11 5.19
3144 3477 1.838073 AACCGCACTCAAGGGTAGGG 61.838 60.000 2.03 0.00 32.68 3.53
3145 3478 0.036306 AAACCGCACTCAAGGGTAGG 59.964 55.000 0.00 0.00 32.68 3.18
3146 3479 1.156736 CAAACCGCACTCAAGGGTAG 58.843 55.000 0.00 0.00 32.68 3.18
3147 3480 0.759959 TCAAACCGCACTCAAGGGTA 59.240 50.000 0.00 0.00 32.68 3.69
3148 3481 0.106918 TTCAAACCGCACTCAAGGGT 60.107 50.000 0.00 0.00 34.99 4.34
3149 3482 0.310854 GTTCAAACCGCACTCAAGGG 59.689 55.000 0.00 0.00 0.00 3.95
3150 3483 1.308998 AGTTCAAACCGCACTCAAGG 58.691 50.000 0.00 0.00 0.00 3.61
3151 3484 4.213270 TCAATAGTTCAAACCGCACTCAAG 59.787 41.667 0.00 0.00 0.00 3.02
3152 3485 4.130857 TCAATAGTTCAAACCGCACTCAA 58.869 39.130 0.00 0.00 0.00 3.02
3153 3486 3.734463 TCAATAGTTCAAACCGCACTCA 58.266 40.909 0.00 0.00 0.00 3.41
3154 3487 4.946784 ATCAATAGTTCAAACCGCACTC 57.053 40.909 0.00 0.00 0.00 3.51
3155 3488 5.705609 AAATCAATAGTTCAAACCGCACT 57.294 34.783 0.00 0.00 0.00 4.40
3156 3489 5.506832 CGTAAATCAATAGTTCAAACCGCAC 59.493 40.000 0.00 0.00 0.00 5.34
3157 3490 5.179742 ACGTAAATCAATAGTTCAAACCGCA 59.820 36.000 0.00 0.00 0.00 5.69
3158 3491 5.624292 ACGTAAATCAATAGTTCAAACCGC 58.376 37.500 0.00 0.00 0.00 5.68
3159 3492 9.763465 AATTACGTAAATCAATAGTTCAAACCG 57.237 29.630 12.81 0.00 0.00 4.44
3202 3535 5.569059 TCGATTTCTAGGTTTCGTCGTAAAC 59.431 40.000 10.12 10.12 38.39 2.01
3203 3536 5.698832 TCGATTTCTAGGTTTCGTCGTAAA 58.301 37.500 8.32 0.00 33.52 2.01
3204 3537 5.295431 TCGATTTCTAGGTTTCGTCGTAA 57.705 39.130 8.32 0.00 33.52 3.18
3205 3538 4.944962 TCGATTTCTAGGTTTCGTCGTA 57.055 40.909 8.32 0.00 33.52 3.43
3206 3539 3.837213 TCGATTTCTAGGTTTCGTCGT 57.163 42.857 8.32 0.00 33.52 4.34
3207 3540 4.204573 GTGATCGATTTCTAGGTTTCGTCG 59.795 45.833 0.00 0.00 33.52 5.12
3208 3541 5.230306 CAGTGATCGATTTCTAGGTTTCGTC 59.770 44.000 0.00 6.78 33.52 4.20
3209 3542 5.103000 CAGTGATCGATTTCTAGGTTTCGT 58.897 41.667 0.00 0.00 33.52 3.85
3210 3543 5.340803 TCAGTGATCGATTTCTAGGTTTCG 58.659 41.667 0.00 0.00 0.00 3.46
3211 3544 6.422400 GGATCAGTGATCGATTTCTAGGTTTC 59.578 42.308 23.56 4.20 39.72 2.78
3212 3545 6.127054 TGGATCAGTGATCGATTTCTAGGTTT 60.127 38.462 23.56 0.00 39.72 3.27
3213 3546 5.363868 TGGATCAGTGATCGATTTCTAGGTT 59.636 40.000 23.56 0.00 39.72 3.50
3214 3547 4.895889 TGGATCAGTGATCGATTTCTAGGT 59.104 41.667 23.56 0.00 39.72 3.08
3215 3548 5.459536 TGGATCAGTGATCGATTTCTAGG 57.540 43.478 23.56 0.00 39.72 3.02
3216 3549 7.959689 AATTGGATCAGTGATCGATTTCTAG 57.040 36.000 23.56 0.00 39.72 2.43
3217 3550 7.986889 TCAAATTGGATCAGTGATCGATTTCTA 59.013 33.333 26.80 20.12 39.72 2.10
3218 3551 6.825213 TCAAATTGGATCAGTGATCGATTTCT 59.175 34.615 26.80 15.23 39.72 2.52
3219 3552 6.909357 GTCAAATTGGATCAGTGATCGATTTC 59.091 38.462 26.80 19.19 39.72 2.17
3220 3553 6.600822 AGTCAAATTGGATCAGTGATCGATTT 59.399 34.615 25.34 25.34 39.72 2.17
3221 3554 6.118170 AGTCAAATTGGATCAGTGATCGATT 58.882 36.000 23.56 21.33 39.72 3.34
3222 3555 5.678583 AGTCAAATTGGATCAGTGATCGAT 58.321 37.500 23.56 17.55 39.72 3.59
3223 3556 5.089970 AGTCAAATTGGATCAGTGATCGA 57.910 39.130 23.56 18.71 39.72 3.59
3224 3557 5.235186 GGTAGTCAAATTGGATCAGTGATCG 59.765 44.000 23.56 11.12 39.72 3.69
3225 3558 6.352516 AGGTAGTCAAATTGGATCAGTGATC 58.647 40.000 22.69 22.69 38.25 2.92
3226 3559 6.157645 AGAGGTAGTCAAATTGGATCAGTGAT 59.842 38.462 4.98 4.98 0.00 3.06
3227 3560 5.485353 AGAGGTAGTCAAATTGGATCAGTGA 59.515 40.000 0.00 0.00 0.00 3.41
3228 3561 5.738909 AGAGGTAGTCAAATTGGATCAGTG 58.261 41.667 0.00 0.00 0.00 3.66
3229 3562 6.440647 TGTAGAGGTAGTCAAATTGGATCAGT 59.559 38.462 0.00 0.00 0.00 3.41
3230 3563 6.878317 TGTAGAGGTAGTCAAATTGGATCAG 58.122 40.000 0.00 0.00 0.00 2.90
3231 3564 6.127054 CCTGTAGAGGTAGTCAAATTGGATCA 60.127 42.308 0.00 0.00 34.16 2.92
3232 3565 6.098409 TCCTGTAGAGGTAGTCAAATTGGATC 59.902 42.308 5.71 0.00 40.76 3.36
3233 3566 5.964477 TCCTGTAGAGGTAGTCAAATTGGAT 59.036 40.000 5.71 0.00 40.76 3.41
3234 3567 5.338632 TCCTGTAGAGGTAGTCAAATTGGA 58.661 41.667 5.71 0.00 40.76 3.53
3235 3568 5.677319 TCCTGTAGAGGTAGTCAAATTGG 57.323 43.478 5.71 0.00 40.76 3.16
3236 3569 8.138712 GTCTATCCTGTAGAGGTAGTCAAATTG 58.861 40.741 5.71 0.00 40.76 2.32
3237 3570 7.288158 GGTCTATCCTGTAGAGGTAGTCAAATT 59.712 40.741 5.71 0.00 40.76 1.82
3238 3571 6.778559 GGTCTATCCTGTAGAGGTAGTCAAAT 59.221 42.308 5.71 0.00 40.76 2.32
3239 3572 6.068971 AGGTCTATCCTGTAGAGGTAGTCAAA 60.069 42.308 5.71 0.00 46.19 2.69
3240 3573 5.432390 AGGTCTATCCTGTAGAGGTAGTCAA 59.568 44.000 5.71 0.00 46.19 3.18
3241 3574 4.976442 AGGTCTATCCTGTAGAGGTAGTCA 59.024 45.833 5.71 0.00 46.19 3.41
3242 3575 5.571791 AGGTCTATCCTGTAGAGGTAGTC 57.428 47.826 5.71 5.33 46.19 2.59
3251 3584 8.311836 CAGTTTTCTGTTAAGGTCTATCCTGTA 58.688 37.037 0.00 0.00 43.22 2.74
3252 3585 7.162082 CAGTTTTCTGTTAAGGTCTATCCTGT 58.838 38.462 0.00 0.00 43.22 4.00
3253 3586 7.602517 CAGTTTTCTGTTAAGGTCTATCCTG 57.397 40.000 0.00 0.00 43.22 3.86
3269 3602 6.046593 TCATCACGTTACTCAACAGTTTTCT 58.953 36.000 0.00 0.00 34.05 2.52
3270 3603 6.281848 TCATCACGTTACTCAACAGTTTTC 57.718 37.500 0.00 0.00 34.05 2.29
3271 3604 5.236478 CCTCATCACGTTACTCAACAGTTTT 59.764 40.000 0.00 0.00 34.05 2.43
3272 3605 4.750098 CCTCATCACGTTACTCAACAGTTT 59.250 41.667 0.00 0.00 34.05 2.66
3273 3606 4.038763 TCCTCATCACGTTACTCAACAGTT 59.961 41.667 0.00 0.00 34.05 3.16
3274 3607 3.572682 TCCTCATCACGTTACTCAACAGT 59.427 43.478 0.00 0.00 34.05 3.55
3275 3608 3.921021 GTCCTCATCACGTTACTCAACAG 59.079 47.826 0.00 0.00 34.05 3.16
3276 3609 3.319689 TGTCCTCATCACGTTACTCAACA 59.680 43.478 0.00 0.00 34.05 3.33
3277 3610 3.909430 TGTCCTCATCACGTTACTCAAC 58.091 45.455 0.00 0.00 0.00 3.18
3278 3611 4.219725 TCATGTCCTCATCACGTTACTCAA 59.780 41.667 0.00 0.00 31.15 3.02
3279 3612 3.761752 TCATGTCCTCATCACGTTACTCA 59.238 43.478 0.00 0.00 31.15 3.41
3280 3613 4.371855 TCATGTCCTCATCACGTTACTC 57.628 45.455 0.00 0.00 31.15 2.59
3281 3614 4.801330 TTCATGTCCTCATCACGTTACT 57.199 40.909 0.00 0.00 31.15 2.24
3282 3615 5.462398 GGTATTCATGTCCTCATCACGTTAC 59.538 44.000 0.00 0.00 31.15 2.50
3283 3616 5.128008 TGGTATTCATGTCCTCATCACGTTA 59.872 40.000 0.00 0.00 31.15 3.18
3284 3617 4.081142 TGGTATTCATGTCCTCATCACGTT 60.081 41.667 0.00 0.00 31.15 3.99
3285 3618 3.450817 TGGTATTCATGTCCTCATCACGT 59.549 43.478 0.00 0.00 31.15 4.49
3286 3619 4.058721 TGGTATTCATGTCCTCATCACG 57.941 45.455 0.00 0.00 31.15 4.35
3287 3620 5.824624 ACAATGGTATTCATGTCCTCATCAC 59.175 40.000 0.00 0.00 35.99 3.06
3288 3621 6.005066 ACAATGGTATTCATGTCCTCATCA 57.995 37.500 0.00 0.00 35.99 3.07
3289 3622 6.949352 AACAATGGTATTCATGTCCTCATC 57.051 37.500 0.00 0.00 35.99 2.92
3290 3623 7.283127 GTGTAACAATGGTATTCATGTCCTCAT 59.717 37.037 0.00 0.00 35.99 2.90
3291 3624 6.597672 GTGTAACAATGGTATTCATGTCCTCA 59.402 38.462 0.00 0.00 35.99 3.86
3292 3625 6.038271 GGTGTAACAATGGTATTCATGTCCTC 59.962 42.308 0.00 0.00 39.98 3.71
3293 3626 5.885912 GGTGTAACAATGGTATTCATGTCCT 59.114 40.000 0.00 0.00 39.98 3.85
3294 3627 5.067283 GGGTGTAACAATGGTATTCATGTCC 59.933 44.000 0.00 0.00 39.98 4.02
3295 3628 5.650266 TGGGTGTAACAATGGTATTCATGTC 59.350 40.000 0.00 0.00 39.98 3.06
3296 3629 5.417580 GTGGGTGTAACAATGGTATTCATGT 59.582 40.000 0.00 0.00 39.98 3.21
3297 3630 5.417266 TGTGGGTGTAACAATGGTATTCATG 59.583 40.000 0.00 0.00 39.98 3.07
3298 3631 5.575157 TGTGGGTGTAACAATGGTATTCAT 58.425 37.500 0.00 0.00 39.98 2.57
3299 3632 4.986783 TGTGGGTGTAACAATGGTATTCA 58.013 39.130 0.00 0.00 39.98 2.57
3300 3633 4.142469 GCTGTGGGTGTAACAATGGTATTC 60.142 45.833 0.00 0.00 39.98 1.75
3301 3634 3.761752 GCTGTGGGTGTAACAATGGTATT 59.238 43.478 0.00 0.00 39.98 1.89
3302 3635 3.352648 GCTGTGGGTGTAACAATGGTAT 58.647 45.455 0.00 0.00 39.98 2.73
3303 3636 2.553466 GGCTGTGGGTGTAACAATGGTA 60.553 50.000 0.00 0.00 39.98 3.25
3304 3637 1.616159 GCTGTGGGTGTAACAATGGT 58.384 50.000 0.00 0.00 39.98 3.55
3305 3638 0.887933 GGCTGTGGGTGTAACAATGG 59.112 55.000 0.00 0.00 39.98 3.16
3306 3639 0.887933 GGGCTGTGGGTGTAACAATG 59.112 55.000 0.00 0.00 39.98 2.82
3307 3640 0.480690 TGGGCTGTGGGTGTAACAAT 59.519 50.000 0.00 0.00 39.98 2.71
3308 3641 0.480690 ATGGGCTGTGGGTGTAACAA 59.519 50.000 0.00 0.00 39.98 2.83
3309 3642 0.251121 CATGGGCTGTGGGTGTAACA 60.251 55.000 0.00 0.00 39.98 2.41
3310 3643 1.595093 GCATGGGCTGTGGGTGTAAC 61.595 60.000 0.00 0.00 36.96 2.50
3311 3644 1.304052 GCATGGGCTGTGGGTGTAA 60.304 57.895 0.00 0.00 36.96 2.41
3312 3645 2.354729 GCATGGGCTGTGGGTGTA 59.645 61.111 0.00 0.00 36.96 2.90
3322 3655 3.005554 CAGTATGTATAGCAGCATGGGC 58.994 50.000 0.00 0.00 41.61 5.36
3323 3656 3.261643 TCCAGTATGTATAGCAGCATGGG 59.738 47.826 0.00 0.00 35.86 4.00
3324 3657 4.248859 GTCCAGTATGTATAGCAGCATGG 58.751 47.826 0.00 0.00 35.86 3.66
3325 3658 4.248859 GGTCCAGTATGTATAGCAGCATG 58.751 47.826 0.00 0.00 40.87 4.06
3326 3659 3.056536 CGGTCCAGTATGTATAGCAGCAT 60.057 47.826 0.00 0.00 0.00 3.79
3327 3660 2.296190 CGGTCCAGTATGTATAGCAGCA 59.704 50.000 0.00 0.00 0.00 4.41
3328 3661 2.557056 TCGGTCCAGTATGTATAGCAGC 59.443 50.000 0.00 0.00 0.00 5.25
3329 3662 5.392767 AATCGGTCCAGTATGTATAGCAG 57.607 43.478 0.00 0.00 0.00 4.24
3330 3663 6.008331 AGTAATCGGTCCAGTATGTATAGCA 58.992 40.000 0.00 0.00 0.00 3.49
3331 3664 6.512342 AGTAATCGGTCCAGTATGTATAGC 57.488 41.667 0.00 0.00 0.00 2.97
3332 3665 9.100554 CTCTAGTAATCGGTCCAGTATGTATAG 57.899 40.741 0.00 0.00 0.00 1.31
3333 3666 7.551974 GCTCTAGTAATCGGTCCAGTATGTATA 59.448 40.741 0.00 0.00 0.00 1.47
3334 3667 6.374894 GCTCTAGTAATCGGTCCAGTATGTAT 59.625 42.308 0.00 0.00 0.00 2.29
3335 3668 5.704515 GCTCTAGTAATCGGTCCAGTATGTA 59.295 44.000 0.00 0.00 0.00 2.29
3336 3669 4.519730 GCTCTAGTAATCGGTCCAGTATGT 59.480 45.833 0.00 0.00 0.00 2.29
3337 3670 4.762765 AGCTCTAGTAATCGGTCCAGTATG 59.237 45.833 0.00 0.00 0.00 2.39
3338 3671 4.988029 AGCTCTAGTAATCGGTCCAGTAT 58.012 43.478 0.00 0.00 0.00 2.12
3339 3672 4.387598 GAGCTCTAGTAATCGGTCCAGTA 58.612 47.826 6.43 0.00 0.00 2.74
3340 3673 3.215975 GAGCTCTAGTAATCGGTCCAGT 58.784 50.000 6.43 0.00 0.00 4.00
3341 3674 2.224549 CGAGCTCTAGTAATCGGTCCAG 59.775 54.545 12.85 0.00 0.00 3.86
3342 3675 2.219458 CGAGCTCTAGTAATCGGTCCA 58.781 52.381 12.85 0.00 0.00 4.02
3343 3676 1.069091 GCGAGCTCTAGTAATCGGTCC 60.069 57.143 12.85 0.00 35.76 4.46
3344 3677 1.398705 CGCGAGCTCTAGTAATCGGTC 60.399 57.143 12.85 0.00 35.76 4.79
3345 3678 0.587285 CGCGAGCTCTAGTAATCGGT 59.413 55.000 12.85 0.00 35.76 4.69
3346 3679 3.369701 CGCGAGCTCTAGTAATCGG 57.630 57.895 12.85 0.00 35.76 4.18
3359 3692 2.582202 ATTCAATTGGCGTGCGCGAG 62.582 55.000 26.19 0.19 43.06 5.03
3360 3693 2.193865 AATTCAATTGGCGTGCGCGA 62.194 50.000 26.19 2.13 43.06 5.87
3361 3694 0.522286 TAATTCAATTGGCGTGCGCG 60.522 50.000 16.86 16.86 43.06 6.86
3362 3695 1.780860 GATAATTCAATTGGCGTGCGC 59.219 47.619 8.17 8.17 41.06 6.09
3363 3696 3.038017 CTGATAATTCAATTGGCGTGCG 58.962 45.455 5.42 0.00 0.00 5.34
3364 3697 3.181487 ACCTGATAATTCAATTGGCGTGC 60.181 43.478 5.42 0.00 0.00 5.34
3365 3698 4.637483 ACCTGATAATTCAATTGGCGTG 57.363 40.909 5.42 0.00 0.00 5.34
3366 3699 5.437060 AGTACCTGATAATTCAATTGGCGT 58.563 37.500 5.42 0.00 0.00 5.68
3367 3700 6.377327 AAGTACCTGATAATTCAATTGGCG 57.623 37.500 5.42 0.00 0.00 5.69
3368 3701 6.912591 CGAAAGTACCTGATAATTCAATTGGC 59.087 38.462 5.42 0.00 0.00 4.52
3369 3702 7.985476 ACGAAAGTACCTGATAATTCAATTGG 58.015 34.615 5.42 0.00 46.88 3.16
3393 3726 8.500773 TGAACATTAGAATCGTTACCAAGAAAC 58.499 33.333 0.00 0.00 0.00 2.78
3394 3727 8.610248 TGAACATTAGAATCGTTACCAAGAAA 57.390 30.769 0.00 0.00 0.00 2.52
3395 3728 8.664798 CATGAACATTAGAATCGTTACCAAGAA 58.335 33.333 0.00 0.00 0.00 2.52
3396 3729 8.038351 TCATGAACATTAGAATCGTTACCAAGA 58.962 33.333 0.00 0.00 0.00 3.02
3397 3730 8.196802 TCATGAACATTAGAATCGTTACCAAG 57.803 34.615 0.00 0.00 0.00 3.61
3398 3731 8.038351 TCTCATGAACATTAGAATCGTTACCAA 58.962 33.333 0.00 0.00 0.00 3.67
3399 3732 7.552459 TCTCATGAACATTAGAATCGTTACCA 58.448 34.615 0.00 0.00 0.00 3.25
3400 3733 8.420374 TTCTCATGAACATTAGAATCGTTACC 57.580 34.615 0.00 0.00 29.04 2.85
3404 3737 9.987272 TCATATTCTCATGAACATTAGAATCGT 57.013 29.630 20.31 12.16 39.59 3.73
3408 3741 9.788889 AGCATCATATTCTCATGAACATTAGAA 57.211 29.630 11.93 11.93 38.39 2.10
3409 3742 9.216117 CAGCATCATATTCTCATGAACATTAGA 57.784 33.333 0.00 0.00 38.39 2.10
3410 3743 7.963465 GCAGCATCATATTCTCATGAACATTAG 59.037 37.037 0.00 0.00 38.39 1.73
3411 3744 7.094506 GGCAGCATCATATTCTCATGAACATTA 60.095 37.037 0.00 0.00 38.39 1.90
3412 3745 6.294564 GGCAGCATCATATTCTCATGAACATT 60.295 38.462 0.00 0.00 38.39 2.71
3413 3746 5.183331 GGCAGCATCATATTCTCATGAACAT 59.817 40.000 0.00 0.00 38.39 2.71
3414 3747 4.517832 GGCAGCATCATATTCTCATGAACA 59.482 41.667 0.00 0.00 38.39 3.18
3415 3748 4.760715 AGGCAGCATCATATTCTCATGAAC 59.239 41.667 0.00 0.00 38.39 3.18
3416 3749 4.981812 AGGCAGCATCATATTCTCATGAA 58.018 39.130 0.00 0.00 38.39 2.57
3417 3750 4.635699 AGGCAGCATCATATTCTCATGA 57.364 40.909 0.00 0.00 39.20 3.07
3418 3751 6.812879 TTTAGGCAGCATCATATTCTCATG 57.187 37.500 0.00 0.00 0.00 3.07
3419 3752 7.668469 TCAATTTAGGCAGCATCATATTCTCAT 59.332 33.333 0.00 0.00 0.00 2.90
3420 3753 6.999871 TCAATTTAGGCAGCATCATATTCTCA 59.000 34.615 0.00 0.00 0.00 3.27
3421 3754 7.444629 TCAATTTAGGCAGCATCATATTCTC 57.555 36.000 0.00 0.00 0.00 2.87
3422 3755 7.828508 TTCAATTTAGGCAGCATCATATTCT 57.171 32.000 0.00 0.00 0.00 2.40
3423 3756 9.565213 GTATTCAATTTAGGCAGCATCATATTC 57.435 33.333 0.00 0.00 0.00 1.75
3424 3757 9.081204 TGTATTCAATTTAGGCAGCATCATATT 57.919 29.630 0.00 0.00 0.00 1.28
3425 3758 8.640063 TGTATTCAATTTAGGCAGCATCATAT 57.360 30.769 0.00 0.00 0.00 1.78
3426 3759 8.640063 ATGTATTCAATTTAGGCAGCATCATA 57.360 30.769 0.00 0.00 0.00 2.15
3427 3760 6.964807 TGTATTCAATTTAGGCAGCATCAT 57.035 33.333 0.00 0.00 0.00 2.45
3428 3761 6.964807 ATGTATTCAATTTAGGCAGCATCA 57.035 33.333 0.00 0.00 0.00 3.07
3429 3762 7.707893 ACAAATGTATTCAATTTAGGCAGCATC 59.292 33.333 0.00 0.00 0.00 3.91
3430 3763 7.558604 ACAAATGTATTCAATTTAGGCAGCAT 58.441 30.769 0.00 0.00 0.00 3.79
3431 3764 6.934056 ACAAATGTATTCAATTTAGGCAGCA 58.066 32.000 0.00 0.00 0.00 4.41
3432 3765 7.832503 AACAAATGTATTCAATTTAGGCAGC 57.167 32.000 0.00 0.00 0.00 5.25
3434 3767 8.502387 GCAAAACAAATGTATTCAATTTAGGCA 58.498 29.630 0.00 0.00 0.00 4.75
3435 3768 8.720562 AGCAAAACAAATGTATTCAATTTAGGC 58.279 29.630 0.00 0.00 0.00 3.93
3452 3785 4.813697 GCCCTTCATTTGTAAGCAAAACAA 59.186 37.500 0.00 0.00 46.23 2.83
3453 3786 4.376146 GCCCTTCATTTGTAAGCAAAACA 58.624 39.130 0.00 0.00 46.23 2.83
3454 3787 3.745975 GGCCCTTCATTTGTAAGCAAAAC 59.254 43.478 0.00 0.00 46.23 2.43
3455 3788 3.645687 AGGCCCTTCATTTGTAAGCAAAA 59.354 39.130 0.00 0.00 46.23 2.44
3457 3790 2.888212 AGGCCCTTCATTTGTAAGCAA 58.112 42.857 0.00 0.00 0.00 3.91
3458 3791 2.603075 AGGCCCTTCATTTGTAAGCA 57.397 45.000 0.00 0.00 0.00 3.91
3459 3792 2.359214 GCTAGGCCCTTCATTTGTAAGC 59.641 50.000 0.00 0.00 0.00 3.09
3460 3793 3.891049 AGCTAGGCCCTTCATTTGTAAG 58.109 45.455 0.00 0.00 0.00 2.34
3461 3794 4.016444 CAAGCTAGGCCCTTCATTTGTAA 58.984 43.478 0.00 0.00 0.00 2.41
3462 3795 3.620488 CAAGCTAGGCCCTTCATTTGTA 58.380 45.455 0.00 0.00 0.00 2.41
3463 3796 2.450476 CAAGCTAGGCCCTTCATTTGT 58.550 47.619 0.00 0.00 0.00 2.83
3464 3797 1.753073 CCAAGCTAGGCCCTTCATTTG 59.247 52.381 0.00 0.00 0.00 2.32
3465 3798 1.640670 TCCAAGCTAGGCCCTTCATTT 59.359 47.619 0.00 0.00 0.00 2.32
3466 3799 1.064389 GTCCAAGCTAGGCCCTTCATT 60.064 52.381 0.00 0.00 0.00 2.57
3467 3800 0.548510 GTCCAAGCTAGGCCCTTCAT 59.451 55.000 0.00 0.00 0.00 2.57
3468 3801 0.840288 TGTCCAAGCTAGGCCCTTCA 60.840 55.000 0.00 0.00 0.00 3.02
3469 3802 0.328258 TTGTCCAAGCTAGGCCCTTC 59.672 55.000 0.00 0.00 0.00 3.46
3470 3803 0.329596 CTTGTCCAAGCTAGGCCCTT 59.670 55.000 0.00 0.00 0.00 3.95
3471 3804 0.547712 TCTTGTCCAAGCTAGGCCCT 60.548 55.000 0.00 0.00 38.28 5.19
3472 3805 0.328258 TTCTTGTCCAAGCTAGGCCC 59.672 55.000 0.00 0.00 38.28 5.80
3473 3806 2.087646 CTTTCTTGTCCAAGCTAGGCC 58.912 52.381 0.00 0.00 38.28 5.19
3474 3807 3.059352 TCTTTCTTGTCCAAGCTAGGC 57.941 47.619 2.09 0.00 38.28 3.93
3475 3808 4.836825 TCATCTTTCTTGTCCAAGCTAGG 58.163 43.478 2.09 0.00 38.28 3.02
3476 3809 5.123027 GGTTCATCTTTCTTGTCCAAGCTAG 59.877 44.000 2.09 2.83 38.28 3.42
3477 3810 5.003804 GGTTCATCTTTCTTGTCCAAGCTA 58.996 41.667 2.09 0.00 38.28 3.32
3478 3811 3.823304 GGTTCATCTTTCTTGTCCAAGCT 59.177 43.478 2.09 0.00 38.28 3.74
3479 3812 3.823304 AGGTTCATCTTTCTTGTCCAAGC 59.177 43.478 2.09 0.00 38.28 4.01
3480 3813 5.278660 CCAAGGTTCATCTTTCTTGTCCAAG 60.279 44.000 0.47 0.47 39.71 3.61
3481 3814 4.584325 CCAAGGTTCATCTTTCTTGTCCAA 59.416 41.667 0.00 0.00 35.98 3.53
3482 3815 4.141274 TCCAAGGTTCATCTTTCTTGTCCA 60.141 41.667 0.00 0.00 35.98 4.02
3483 3816 4.398319 TCCAAGGTTCATCTTTCTTGTCC 58.602 43.478 0.00 0.00 35.98 4.02
3484 3817 4.083057 GCTCCAAGGTTCATCTTTCTTGTC 60.083 45.833 0.00 0.00 35.98 3.18
3485 3818 3.823304 GCTCCAAGGTTCATCTTTCTTGT 59.177 43.478 0.00 0.00 35.98 3.16
3486 3819 3.822735 TGCTCCAAGGTTCATCTTTCTTG 59.177 43.478 0.00 0.00 37.09 3.02
3487 3820 4.104383 TGCTCCAAGGTTCATCTTTCTT 57.896 40.909 0.00 0.00 0.00 2.52
3488 3821 3.795688 TGCTCCAAGGTTCATCTTTCT 57.204 42.857 0.00 0.00 0.00 2.52
3489 3822 3.823304 ACTTGCTCCAAGGTTCATCTTTC 59.177 43.478 9.50 0.00 44.81 2.62
3490 3823 3.837355 ACTTGCTCCAAGGTTCATCTTT 58.163 40.909 9.50 0.00 44.81 2.52
3491 3824 3.515602 ACTTGCTCCAAGGTTCATCTT 57.484 42.857 9.50 0.00 44.81 2.40
3492 3825 3.181440 TGAACTTGCTCCAAGGTTCATCT 60.181 43.478 9.50 0.00 41.88 2.90
3493 3826 3.149196 TGAACTTGCTCCAAGGTTCATC 58.851 45.455 9.50 1.66 41.88 2.92
3494 3827 3.228188 TGAACTTGCTCCAAGGTTCAT 57.772 42.857 9.50 0.00 41.88 2.57
3495 3828 2.727123 TGAACTTGCTCCAAGGTTCA 57.273 45.000 9.50 12.01 41.88 3.18
3496 3829 2.287849 GCTTGAACTTGCTCCAAGGTTC 60.288 50.000 9.50 10.12 41.88 3.62
3497 3830 1.683385 GCTTGAACTTGCTCCAAGGTT 59.317 47.619 9.50 2.29 41.88 3.50
3498 3831 1.322442 GCTTGAACTTGCTCCAAGGT 58.678 50.000 9.50 2.58 44.76 3.50
3499 3832 1.321474 TGCTTGAACTTGCTCCAAGG 58.679 50.000 9.50 0.00 44.81 3.61
3500 3833 2.352421 CCATGCTTGAACTTGCTCCAAG 60.352 50.000 0.22 3.57 45.85 3.61
3501 3834 1.614903 CCATGCTTGAACTTGCTCCAA 59.385 47.619 0.22 0.00 0.00 3.53
3502 3835 1.202915 TCCATGCTTGAACTTGCTCCA 60.203 47.619 0.22 0.00 0.00 3.86
3503 3836 1.538047 TCCATGCTTGAACTTGCTCC 58.462 50.000 0.22 0.00 0.00 4.70
3504 3837 2.490903 ACATCCATGCTTGAACTTGCTC 59.509 45.455 0.22 0.00 0.00 4.26
3505 3838 2.490903 GACATCCATGCTTGAACTTGCT 59.509 45.455 0.22 0.00 0.00 3.91
3506 3839 2.730090 CGACATCCATGCTTGAACTTGC 60.730 50.000 0.22 0.00 0.00 4.01
3507 3840 2.159476 CCGACATCCATGCTTGAACTTG 60.159 50.000 0.22 0.00 0.00 3.16
3508 3841 2.086869 CCGACATCCATGCTTGAACTT 58.913 47.619 0.22 0.00 0.00 2.66
3509 3842 1.278985 TCCGACATCCATGCTTGAACT 59.721 47.619 0.22 0.00 0.00 3.01
3510 3843 1.667724 CTCCGACATCCATGCTTGAAC 59.332 52.381 0.22 0.00 0.00 3.18
3511 3844 1.278985 ACTCCGACATCCATGCTTGAA 59.721 47.619 0.22 0.00 0.00 2.69
3512 3845 0.904649 ACTCCGACATCCATGCTTGA 59.095 50.000 0.22 0.00 0.00 3.02
3513 3846 2.602257 TACTCCGACATCCATGCTTG 57.398 50.000 0.00 0.00 0.00 4.01
3514 3847 3.627395 TTTACTCCGACATCCATGCTT 57.373 42.857 0.00 0.00 0.00 3.91
3515 3848 3.845781 ATTTACTCCGACATCCATGCT 57.154 42.857 0.00 0.00 0.00 3.79
3516 3849 4.632153 ACTATTTACTCCGACATCCATGC 58.368 43.478 0.00 0.00 0.00 4.06
3517 3850 5.842907 TGACTATTTACTCCGACATCCATG 58.157 41.667 0.00 0.00 0.00 3.66
3518 3851 6.459066 CATGACTATTTACTCCGACATCCAT 58.541 40.000 0.00 0.00 0.00 3.41
3519 3852 5.221441 CCATGACTATTTACTCCGACATCCA 60.221 44.000 0.00 0.00 0.00 3.41
3520 3853 5.230942 CCATGACTATTTACTCCGACATCC 58.769 45.833 0.00 0.00 0.00 3.51
3521 3854 5.221461 ACCCATGACTATTTACTCCGACATC 60.221 44.000 0.00 0.00 0.00 3.06
3522 3855 4.654262 ACCCATGACTATTTACTCCGACAT 59.346 41.667 0.00 0.00 0.00 3.06
3523 3856 4.028131 ACCCATGACTATTTACTCCGACA 58.972 43.478 0.00 0.00 0.00 4.35
3524 3857 4.667519 ACCCATGACTATTTACTCCGAC 57.332 45.455 0.00 0.00 0.00 4.79
3525 3858 4.280174 GCTACCCATGACTATTTACTCCGA 59.720 45.833 0.00 0.00 0.00 4.55
3526 3859 4.557205 GCTACCCATGACTATTTACTCCG 58.443 47.826 0.00 0.00 0.00 4.63
3527 3860 4.593634 AGGCTACCCATGACTATTTACTCC 59.406 45.833 0.00 0.00 0.00 3.85
3528 3861 5.810080 AGGCTACCCATGACTATTTACTC 57.190 43.478 0.00 0.00 0.00 2.59
3529 3862 5.246429 GCTAGGCTACCCATGACTATTTACT 59.754 44.000 0.00 0.00 0.00 2.24
3530 3863 5.480205 GCTAGGCTACCCATGACTATTTAC 58.520 45.833 0.00 0.00 0.00 2.01
3531 3864 4.530946 GGCTAGGCTACCCATGACTATTTA 59.469 45.833 9.46 0.00 0.00 1.40
3532 3865 3.328050 GGCTAGGCTACCCATGACTATTT 59.672 47.826 9.46 0.00 0.00 1.40
3533 3866 2.907042 GGCTAGGCTACCCATGACTATT 59.093 50.000 9.46 0.00 0.00 1.73
3534 3867 2.541466 GGCTAGGCTACCCATGACTAT 58.459 52.381 9.46 0.00 0.00 2.12
3535 3868 1.822062 CGGCTAGGCTACCCATGACTA 60.822 57.143 15.11 0.00 0.00 2.59
3536 3869 1.115930 CGGCTAGGCTACCCATGACT 61.116 60.000 15.11 0.00 0.00 3.41
3537 3870 1.367840 CGGCTAGGCTACCCATGAC 59.632 63.158 15.11 0.00 0.00 3.06
3538 3871 1.837051 CCGGCTAGGCTACCCATGA 60.837 63.158 15.11 0.00 0.00 3.07
3539 3872 2.743718 CCGGCTAGGCTACCCATG 59.256 66.667 15.11 0.00 0.00 3.66
3548 3881 3.866582 CAGGGGAAGCCGGCTAGG 61.867 72.222 33.07 11.88 44.97 3.02
3549 3882 3.866582 CCAGGGGAAGCCGGCTAG 61.867 72.222 33.07 15.04 0.00 3.42
3556 3889 3.342477 AGAAGGGCCAGGGGAAGC 61.342 66.667 6.18 0.00 0.00 3.86
3557 3890 1.500783 TTCAGAAGGGCCAGGGGAAG 61.501 60.000 6.18 0.00 0.00 3.46
3558 3891 1.465188 TTCAGAAGGGCCAGGGGAA 60.465 57.895 6.18 1.01 0.00 3.97
3559 3892 1.925455 CTTCAGAAGGGCCAGGGGA 60.925 63.158 6.18 0.00 0.00 4.81
3560 3893 1.500783 TTCTTCAGAAGGGCCAGGGG 61.501 60.000 6.18 0.00 0.00 4.79
3561 3894 0.405585 TTTCTTCAGAAGGGCCAGGG 59.594 55.000 6.18 0.00 35.21 4.45
3562 3895 2.521547 ATTTCTTCAGAAGGGCCAGG 57.478 50.000 6.18 0.00 35.21 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.