Multiple sequence alignment - TraesCS2A01G318100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G318100 chr2A 100.000 4298 0 0 1 4298 543303495 543307792 0.000000e+00 7938.0
1 TraesCS2A01G318100 chr2A 100.000 105 0 0 1 105 109147065 109146961 1.220000e-45 195.0
2 TraesCS2A01G318100 chr2A 98.148 108 2 0 1 108 87615335 87615228 5.670000e-44 189.0
3 TraesCS2A01G318100 chr2A 94.262 122 7 0 3602 3723 706758140 706758261 2.040000e-43 187.0
4 TraesCS2A01G318100 chr2A 93.069 101 5 2 2052 2150 38597846 38597746 3.460000e-31 147.0
5 TraesCS2A01G318100 chr2A 88.333 120 11 2 3603 3722 84610990 84610874 1.610000e-29 141.0
6 TraesCS2A01G318100 chr2A 96.250 80 3 0 4003 4082 718112514 718112435 9.700000e-27 132.0
7 TraesCS2A01G318100 chr2A 91.139 79 6 1 4063 4141 718112175 718112098 5.880000e-19 106.0
8 TraesCS2A01G318100 chr2A 100.000 37 0 0 3554 3590 543307012 543307048 7.710000e-08 69.4
9 TraesCS2A01G318100 chr2A 100.000 37 0 0 3518 3554 543307048 543307084 7.710000e-08 69.4
10 TraesCS2A01G318100 chr2B 93.742 1662 83 9 1868 3510 480409596 480411255 0.000000e+00 2473.0
11 TraesCS2A01G318100 chr2B 91.931 979 49 9 918 1870 480408433 480409407 0.000000e+00 1343.0
12 TraesCS2A01G318100 chr2B 85.612 278 26 7 3726 4001 480411343 480411608 3.270000e-71 279.0
13 TraesCS2A01G318100 chr2B 94.000 100 6 0 2048 2147 58672881 58672782 7.440000e-33 152.0
14 TraesCS2A01G318100 chr2B 94.681 94 5 0 2054 2147 265421877 265421970 3.460000e-31 147.0
15 TraesCS2A01G318100 chr2D 93.389 1664 82 14 1868 3510 405273109 405274765 0.000000e+00 2438.0
16 TraesCS2A01G318100 chr2D 89.239 920 60 25 936 1838 405272113 405273010 0.000000e+00 1114.0
17 TraesCS2A01G318100 chr2D 76.838 816 161 14 109 907 582712598 582711794 6.600000e-118 435.0
18 TraesCS2A01G318100 chr2D 89.928 278 18 6 3726 4001 405274850 405275119 2.460000e-92 350.0
19 TraesCS2A01G318100 chr2D 93.289 149 8 2 4148 4295 405275115 405275262 7.240000e-53 219.0
20 TraesCS2A01G318100 chr2D 94.000 100 6 0 2048 2147 28604876 28604975 7.440000e-33 152.0
21 TraesCS2A01G318100 chr2D 93.069 101 5 2 2052 2150 35508231 35508131 3.460000e-31 147.0
22 TraesCS2A01G318100 chr2D 88.525 122 13 1 3603 3724 83843177 83843057 3.460000e-31 147.0
23 TraesCS2A01G318100 chr7B 85.839 805 97 9 109 906 187255669 187256463 0.000000e+00 839.0
24 TraesCS2A01G318100 chr7B 92.793 111 8 0 3614 3724 636970684 636970794 1.240000e-35 161.0
25 TraesCS2A01G318100 chr7B 91.429 70 5 1 4072 4140 586048541 586048472 1.270000e-15 95.3
26 TraesCS2A01G318100 chr7B 94.595 37 1 1 1833 1869 632337877 632337842 6.000000e-04 56.5
27 TraesCS2A01G318100 chr3A 85.093 805 105 6 109 905 487425720 487424923 0.000000e+00 808.0
28 TraesCS2A01G318100 chr3A 96.491 114 1 3 1 113 462695344 462695233 7.340000e-43 185.0
29 TraesCS2A01G318100 chr3A 94.565 92 5 0 2052 2143 491454121 491454212 4.480000e-30 143.0
30 TraesCS2A01G318100 chr3A 96.923 65 2 0 4077 4141 733929094 733929158 4.540000e-20 110.0
31 TraesCS2A01G318100 chr5D 84.054 809 112 10 109 908 409567591 409566791 0.000000e+00 763.0
32 TraesCS2A01G318100 chr5D 80.000 505 92 7 409 906 495797770 495797268 8.780000e-97 364.0
33 TraesCS2A01G318100 chr5D 87.379 103 11 2 2049 2151 504623739 504623839 2.720000e-22 117.0
34 TraesCS2A01G318100 chr5D 87.379 103 11 2 2049 2151 504646698 504646798 2.720000e-22 117.0
35 TraesCS2A01G318100 chr5D 87.379 103 11 2 2049 2151 504669591 504669691 2.720000e-22 117.0
36 TraesCS2A01G318100 chr5D 87.379 103 11 2 2049 2151 504692547 504692647 2.720000e-22 117.0
37 TraesCS2A01G318100 chr5D 100.000 30 0 0 1840 1869 139441012 139440983 6.000000e-04 56.5
38 TraesCS2A01G318100 chr1B 83.458 804 113 8 106 902 180526851 180526061 0.000000e+00 730.0
39 TraesCS2A01G318100 chr6A 85.762 597 71 9 315 906 578504235 578504822 1.700000e-173 619.0
40 TraesCS2A01G318100 chr6A 74.534 805 181 16 111 902 69924821 69924028 3.200000e-86 329.0
41 TraesCS2A01G318100 chr6A 87.560 209 26 0 109 317 578503903 578504111 4.290000e-60 243.0
42 TraesCS2A01G318100 chr6A 99.048 105 1 0 1 105 106225147 106225043 5.670000e-44 189.0
43 TraesCS2A01G318100 chr6A 99.057 106 0 1 1 106 125041082 125041186 5.670000e-44 189.0
44 TraesCS2A01G318100 chr6A 99.048 105 1 0 1 105 602860248 602860352 5.670000e-44 189.0
45 TraesCS2A01G318100 chr6A 91.736 121 10 0 3602 3722 428691428 428691548 7.390000e-38 169.0
46 TraesCS2A01G318100 chr6A 89.600 125 13 0 3602 3726 597944149 597944273 4.450000e-35 159.0
47 TraesCS2A01G318100 chr6A 97.500 80 2 0 4003 4082 27578340 27578419 2.080000e-28 137.0
48 TraesCS2A01G318100 chr6A 96.250 80 3 0 4003 4082 573146398 573146477 9.700000e-27 132.0
49 TraesCS2A01G318100 chr3B 80.235 425 77 6 483 902 490883405 490882983 3.230000e-81 313.0
50 TraesCS2A01G318100 chr5A 93.846 130 7 1 3592 3721 138171247 138171119 1.220000e-45 195.0
51 TraesCS2A01G318100 chr5A 95.082 122 6 0 3602 3723 42098325 42098204 4.390000e-45 193.0
52 TraesCS2A01G318100 chr5A 96.053 76 3 0 4006 4081 332250685 332250760 1.620000e-24 124.0
53 TraesCS2A01G318100 chr5A 91.139 79 7 0 4063 4141 565747932 565747854 1.630000e-19 108.0
54 TraesCS2A01G318100 chr5A 93.243 74 3 2 4077 4148 565748966 565748893 1.630000e-19 108.0
55 TraesCS2A01G318100 chr5A 100.000 32 0 0 1838 1869 580464515 580464484 4.640000e-05 60.2
56 TraesCS2A01G318100 chr5A 96.970 33 1 0 1837 1869 174594022 174594054 6.000000e-04 56.5
57 TraesCS2A01G318100 chr6B 99.057 106 1 0 1 106 536801152 536801047 1.580000e-44 191.0
58 TraesCS2A01G318100 chr1A 99.048 105 1 0 1 105 71398613 71398717 5.670000e-44 189.0
59 TraesCS2A01G318100 chr1A 99.048 105 1 0 1 105 305269023 305268919 5.670000e-44 189.0
60 TraesCS2A01G318100 chr1A 100.000 31 0 0 1837 1867 245526653 245526623 1.670000e-04 58.4
61 TraesCS2A01G318100 chr1A 100.000 31 0 0 1839 1869 557490505 557490475 1.670000e-04 58.4
62 TraesCS2A01G318100 chr7A 91.597 119 8 1 3604 3722 637981387 637981503 3.440000e-36 163.0
63 TraesCS2A01G318100 chr7D 91.262 103 6 2 2056 2155 6590102 6590000 2.080000e-28 137.0
64 TraesCS2A01G318100 chr7D 91.011 89 7 1 3999 4087 382736329 382736416 7.550000e-23 119.0
65 TraesCS2A01G318100 chr7D 93.671 79 5 0 4002 4080 577701748 577701826 7.550000e-23 119.0
66 TraesCS2A01G318100 chrUn 93.902 82 4 1 4002 4082 2372100 2372181 5.840000e-24 122.0
67 TraesCS2A01G318100 chr5B 93.023 86 3 2 4003 4087 710320122 710320039 5.840000e-24 122.0
68 TraesCS2A01G318100 chr5B 93.750 64 4 0 4078 4141 306404150 306404213 3.540000e-16 97.1
69 TraesCS2A01G318100 chr5B 96.970 33 1 0 1837 1869 166379083 166379115 6.000000e-04 56.5
70 TraesCS2A01G318100 chr4A 93.902 82 4 1 4002 4082 375975578 375975497 5.840000e-24 122.0
71 TraesCS2A01G318100 chr1D 93.846 65 4 0 4077 4141 39962758 39962822 9.840000e-17 99.0
72 TraesCS2A01G318100 chr1D 100.000 30 0 0 1840 1869 226457716 226457687 6.000000e-04 56.5
73 TraesCS2A01G318100 chr6D 93.750 64 4 0 4078 4141 44931153 44931216 3.540000e-16 97.1
74 TraesCS2A01G318100 chr6D 93.750 64 4 0 4078 4141 94596919 94596982 3.540000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G318100 chr2A 543303495 543307792 4297 False 2692.266667 7938 100.000000 1 4298 3 chr2A.!!$F2 4297
1 TraesCS2A01G318100 chr2B 480408433 480411608 3175 False 1365.000000 2473 90.428333 918 4001 3 chr2B.!!$F2 3083
2 TraesCS2A01G318100 chr2D 405272113 405275262 3149 False 1030.250000 2438 91.461250 936 4295 4 chr2D.!!$F2 3359
3 TraesCS2A01G318100 chr2D 582711794 582712598 804 True 435.000000 435 76.838000 109 907 1 chr2D.!!$R3 798
4 TraesCS2A01G318100 chr7B 187255669 187256463 794 False 839.000000 839 85.839000 109 906 1 chr7B.!!$F1 797
5 TraesCS2A01G318100 chr3A 487424923 487425720 797 True 808.000000 808 85.093000 109 905 1 chr3A.!!$R2 796
6 TraesCS2A01G318100 chr5D 409566791 409567591 800 True 763.000000 763 84.054000 109 908 1 chr5D.!!$R2 799
7 TraesCS2A01G318100 chr5D 495797268 495797770 502 True 364.000000 364 80.000000 409 906 1 chr5D.!!$R3 497
8 TraesCS2A01G318100 chr1B 180526061 180526851 790 True 730.000000 730 83.458000 106 902 1 chr1B.!!$R1 796
9 TraesCS2A01G318100 chr6A 578503903 578504822 919 False 431.000000 619 86.661000 109 906 2 chr6A.!!$F7 797
10 TraesCS2A01G318100 chr6A 69924028 69924821 793 True 329.000000 329 74.534000 111 902 1 chr6A.!!$R1 791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.310232 GACGCACCCTACCGTAGATC 59.690 60.000 7.16 0.00 37.87 2.75 F
101 102 0.757935 GCACCCTACCGTAGATCCCA 60.758 60.000 7.16 0.00 0.00 4.37 F
104 105 1.007479 ACCCTACCGTAGATCCCAACA 59.993 52.381 7.16 0.00 0.00 3.33 F
404 532 1.036707 ATCGAAGAGCTGGCTACCTC 58.963 55.000 0.00 0.00 43.63 3.85 F
405 533 1.038130 TCGAAGAGCTGGCTACCTCC 61.038 60.000 0.00 0.00 0.00 4.30 F
527 660 1.339824 CCTGGGATCATCAGCTATGGC 60.340 57.143 9.12 0.00 36.15 4.40 F
587 720 1.566018 GCTTGCCGTGAAGCGTTAGT 61.566 55.000 0.38 0.00 39.10 2.24 F
2457 2845 1.956170 CGACTATGGGGTGCGCATC 60.956 63.158 15.91 14.71 38.05 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2012 2393 0.667487 ACAGATATCCATTCGGCGCG 60.667 55.000 0.00 0.00 0.00 6.86 R
2050 2431 2.492088 GAGGGACCATGTTAAAACTGCC 59.508 50.000 0.00 0.00 0.00 4.85 R
2197 2578 3.222173 TGAGCTTTAGCCAGGTGAAAA 57.778 42.857 0.00 0.00 43.38 2.29 R
2333 2718 6.036083 GCCCTTTCTTCTTGTTTTTCTTGAAC 59.964 38.462 0.00 0.00 0.00 3.18 R
2457 2845 6.559521 CGCCAAAAACTTTTGTAATCAAGTCG 60.560 38.462 12.61 2.72 44.52 4.18 R
2736 3124 4.783227 AGGTTGTATGTGAATAGGTCTGGT 59.217 41.667 0.00 0.00 0.00 4.00 R
2790 3178 0.677288 TTCCTTTGAACGCCTCGAGA 59.323 50.000 15.71 0.00 0.00 4.04 R
4026 4435 0.033781 GTACACCGGTAGCACCACAA 59.966 55.000 6.87 0.00 38.47 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.314541 AGTGGTAACGAACTGTGATCC 57.685 47.619 0.00 0.00 42.51 3.36
23 24 2.631062 AGTGGTAACGAACTGTGATCCA 59.369 45.455 0.00 0.00 42.51 3.41
24 25 3.260884 AGTGGTAACGAACTGTGATCCAT 59.739 43.478 0.00 0.00 42.51 3.41
25 26 3.617263 GTGGTAACGAACTGTGATCCATC 59.383 47.826 0.00 0.00 42.51 3.51
26 27 3.513912 TGGTAACGAACTGTGATCCATCT 59.486 43.478 0.00 0.00 42.51 2.90
27 28 4.113354 GGTAACGAACTGTGATCCATCTC 58.887 47.826 0.00 0.00 0.00 2.75
28 29 2.969628 ACGAACTGTGATCCATCTCC 57.030 50.000 0.00 0.00 0.00 3.71
29 30 1.482593 ACGAACTGTGATCCATCTCCC 59.517 52.381 0.00 0.00 0.00 4.30
30 31 1.536922 CGAACTGTGATCCATCTCCCG 60.537 57.143 0.00 0.00 0.00 5.14
31 32 1.482593 GAACTGTGATCCATCTCCCGT 59.517 52.381 0.00 0.00 0.00 5.28
32 33 2.454336 ACTGTGATCCATCTCCCGTA 57.546 50.000 0.00 0.00 0.00 4.02
33 34 2.311463 ACTGTGATCCATCTCCCGTAG 58.689 52.381 0.00 0.00 0.00 3.51
34 35 1.000283 CTGTGATCCATCTCCCGTAGC 60.000 57.143 0.00 0.00 0.00 3.58
35 36 1.040646 GTGATCCATCTCCCGTAGCA 58.959 55.000 0.00 0.00 0.00 3.49
36 37 1.620819 GTGATCCATCTCCCGTAGCAT 59.379 52.381 0.00 0.00 0.00 3.79
37 38 1.620323 TGATCCATCTCCCGTAGCATG 59.380 52.381 0.00 0.00 0.00 4.06
38 39 1.620819 GATCCATCTCCCGTAGCATGT 59.379 52.381 0.00 0.00 0.00 3.21
39 40 1.496060 TCCATCTCCCGTAGCATGTT 58.504 50.000 0.00 0.00 0.00 2.71
40 41 1.412710 TCCATCTCCCGTAGCATGTTC 59.587 52.381 0.00 0.00 0.00 3.18
41 42 1.414181 CCATCTCCCGTAGCATGTTCT 59.586 52.381 0.00 0.00 0.00 3.01
42 43 2.158900 CCATCTCCCGTAGCATGTTCTT 60.159 50.000 0.00 0.00 0.00 2.52
43 44 2.672961 TCTCCCGTAGCATGTTCTTG 57.327 50.000 0.00 0.00 0.00 3.02
44 45 1.207089 TCTCCCGTAGCATGTTCTTGG 59.793 52.381 0.00 0.00 0.00 3.61
45 46 0.981183 TCCCGTAGCATGTTCTTGGT 59.019 50.000 0.00 0.00 0.00 3.67
46 47 1.349688 TCCCGTAGCATGTTCTTGGTT 59.650 47.619 0.00 0.00 0.00 3.67
47 48 1.468520 CCCGTAGCATGTTCTTGGTTG 59.531 52.381 0.00 0.00 0.00 3.77
48 49 2.151202 CCGTAGCATGTTCTTGGTTGT 58.849 47.619 0.00 0.00 0.00 3.32
49 50 2.552315 CCGTAGCATGTTCTTGGTTGTT 59.448 45.455 0.00 0.00 0.00 2.83
50 51 3.364964 CCGTAGCATGTTCTTGGTTGTTC 60.365 47.826 0.00 0.00 0.00 3.18
51 52 3.498397 CGTAGCATGTTCTTGGTTGTTCT 59.502 43.478 0.00 0.00 0.00 3.01
52 53 3.996150 AGCATGTTCTTGGTTGTTCTG 57.004 42.857 0.00 0.00 0.00 3.02
53 54 2.035066 AGCATGTTCTTGGTTGTTCTGC 59.965 45.455 0.00 0.00 0.00 4.26
54 55 2.653890 CATGTTCTTGGTTGTTCTGCG 58.346 47.619 0.00 0.00 0.00 5.18
55 56 0.380378 TGTTCTTGGTTGTTCTGCGC 59.620 50.000 0.00 0.00 0.00 6.09
56 57 0.380378 GTTCTTGGTTGTTCTGCGCA 59.620 50.000 10.98 10.98 0.00 6.09
57 58 1.001378 GTTCTTGGTTGTTCTGCGCAT 60.001 47.619 12.24 0.00 0.00 4.73
58 59 2.177394 TCTTGGTTGTTCTGCGCATA 57.823 45.000 12.24 0.00 0.00 3.14
59 60 2.076100 TCTTGGTTGTTCTGCGCATAG 58.924 47.619 12.24 0.00 0.00 2.23
60 61 1.131126 CTTGGTTGTTCTGCGCATAGG 59.869 52.381 12.24 0.00 0.00 2.57
61 62 0.323302 TGGTTGTTCTGCGCATAGGA 59.677 50.000 12.24 0.93 0.00 2.94
62 63 1.271108 TGGTTGTTCTGCGCATAGGAA 60.271 47.619 12.24 8.76 0.00 3.36
63 64 1.810151 GGTTGTTCTGCGCATAGGAAA 59.190 47.619 12.24 0.00 0.00 3.13
64 65 2.423538 GGTTGTTCTGCGCATAGGAAAT 59.576 45.455 12.24 0.00 0.00 2.17
65 66 3.119495 GGTTGTTCTGCGCATAGGAAATT 60.119 43.478 12.24 0.00 0.00 1.82
66 67 4.485163 GTTGTTCTGCGCATAGGAAATTT 58.515 39.130 12.24 0.00 0.00 1.82
67 68 4.782019 TGTTCTGCGCATAGGAAATTTT 57.218 36.364 12.24 0.00 0.00 1.82
68 69 5.888691 TGTTCTGCGCATAGGAAATTTTA 57.111 34.783 12.24 0.00 0.00 1.52
69 70 6.260870 TGTTCTGCGCATAGGAAATTTTAA 57.739 33.333 12.24 0.00 0.00 1.52
70 71 6.862209 TGTTCTGCGCATAGGAAATTTTAAT 58.138 32.000 12.24 0.00 0.00 1.40
71 72 7.319646 TGTTCTGCGCATAGGAAATTTTAATT 58.680 30.769 12.24 0.00 0.00 1.40
72 73 7.816995 TGTTCTGCGCATAGGAAATTTTAATTT 59.183 29.630 12.24 0.27 41.06 1.82
73 74 7.754069 TCTGCGCATAGGAAATTTTAATTTG 57.246 32.000 12.24 0.00 38.64 2.32
74 75 6.255453 TCTGCGCATAGGAAATTTTAATTTGC 59.745 34.615 12.24 10.37 44.14 3.68
75 76 5.871524 TGCGCATAGGAAATTTTAATTTGCA 59.128 32.000 5.66 10.72 45.59 4.08
76 77 6.035866 TGCGCATAGGAAATTTTAATTTGCAG 59.964 34.615 5.66 10.35 45.59 4.41
77 78 6.035975 GCGCATAGGAAATTTTAATTTGCAGT 59.964 34.615 17.77 6.53 45.59 4.40
78 79 7.612266 CGCATAGGAAATTTTAATTTGCAGTC 58.388 34.615 17.77 6.59 45.59 3.51
79 80 7.513505 CGCATAGGAAATTTTAATTTGCAGTCG 60.514 37.037 17.77 12.32 45.59 4.18
80 81 7.487829 GCATAGGAAATTTTAATTTGCAGTCGA 59.512 33.333 17.77 0.00 45.59 4.20
81 82 8.798153 CATAGGAAATTTTAATTTGCAGTCGAC 58.202 33.333 17.77 7.70 45.59 4.20
82 83 5.856455 AGGAAATTTTAATTTGCAGTCGACG 59.144 36.000 17.77 6.47 45.59 5.12
83 84 5.442779 GGAAATTTTAATTTGCAGTCGACGC 60.443 40.000 20.46 20.46 43.53 5.19
84 85 3.610786 TTTTAATTTGCAGTCGACGCA 57.389 38.095 24.25 24.25 37.68 5.24
85 86 2.587612 TTAATTTGCAGTCGACGCAC 57.412 45.000 26.64 14.54 39.59 5.34
86 87 0.793861 TAATTTGCAGTCGACGCACC 59.206 50.000 26.64 11.38 39.59 5.01
87 88 1.852067 AATTTGCAGTCGACGCACCC 61.852 55.000 26.64 9.86 39.59 4.61
88 89 2.731691 ATTTGCAGTCGACGCACCCT 62.732 55.000 26.64 15.39 39.59 4.34
89 90 2.089887 TTTGCAGTCGACGCACCCTA 62.090 55.000 26.64 14.51 39.59 3.53
90 91 2.506438 GCAGTCGACGCACCCTAC 60.506 66.667 21.73 0.77 0.00 3.18
91 92 2.181021 CAGTCGACGCACCCTACC 59.819 66.667 10.46 0.00 0.00 3.18
92 93 3.437795 AGTCGACGCACCCTACCG 61.438 66.667 10.46 0.00 0.00 4.02
93 94 3.741476 GTCGACGCACCCTACCGT 61.741 66.667 0.00 0.00 40.85 4.83
94 95 2.046411 TCGACGCACCCTACCGTA 60.046 61.111 0.00 0.00 37.87 4.02
95 96 2.108514 TCGACGCACCCTACCGTAG 61.109 63.158 0.00 0.00 37.87 3.51
96 97 2.108514 CGACGCACCCTACCGTAGA 61.109 63.158 7.16 0.00 37.87 2.59
97 98 1.442526 CGACGCACCCTACCGTAGAT 61.443 60.000 7.16 0.00 37.87 1.98
98 99 0.310232 GACGCACCCTACCGTAGATC 59.690 60.000 7.16 0.00 37.87 2.75
99 100 1.105759 ACGCACCCTACCGTAGATCC 61.106 60.000 7.16 0.00 35.69 3.36
100 101 1.803366 CGCACCCTACCGTAGATCCC 61.803 65.000 7.16 0.00 0.00 3.85
101 102 0.757935 GCACCCTACCGTAGATCCCA 60.758 60.000 7.16 0.00 0.00 4.37
102 103 1.784358 CACCCTACCGTAGATCCCAA 58.216 55.000 7.16 0.00 0.00 4.12
103 104 1.411612 CACCCTACCGTAGATCCCAAC 59.588 57.143 7.16 0.00 0.00 3.77
104 105 1.007479 ACCCTACCGTAGATCCCAACA 59.993 52.381 7.16 0.00 0.00 3.33
205 206 2.480419 CGAGAGTTTGGACCATGACAAC 59.520 50.000 0.00 0.00 0.00 3.32
309 311 2.607187 ACAGACGGCGTCTTTCATTAG 58.393 47.619 37.51 25.99 41.37 1.73
386 514 3.778955 CGATCCCGGCTCCACTAT 58.221 61.111 0.00 0.00 0.00 2.12
401 529 2.287909 CCACTATCGAAGAGCTGGCTAC 60.288 54.545 0.00 0.00 43.63 3.58
402 530 1.957877 ACTATCGAAGAGCTGGCTACC 59.042 52.381 0.00 0.00 43.63 3.18
403 531 2.235016 CTATCGAAGAGCTGGCTACCT 58.765 52.381 0.00 0.00 43.63 3.08
404 532 1.036707 ATCGAAGAGCTGGCTACCTC 58.963 55.000 0.00 0.00 43.63 3.85
405 533 1.038130 TCGAAGAGCTGGCTACCTCC 61.038 60.000 0.00 0.00 0.00 4.30
406 534 1.826709 GAAGAGCTGGCTACCTCCC 59.173 63.158 0.00 0.00 0.00 4.30
407 535 1.690985 AAGAGCTGGCTACCTCCCC 60.691 63.158 0.00 0.00 0.00 4.81
447 575 1.667756 CGAAGATCAACGTGGACGGAA 60.668 52.381 0.00 0.00 44.95 4.30
452 585 3.552384 AACGTGGACGGAAGGGCA 61.552 61.111 3.93 0.00 44.95 5.36
527 660 1.339824 CCTGGGATCATCAGCTATGGC 60.340 57.143 9.12 0.00 36.15 4.40
557 690 3.125316 GGAATCACTGATCCGTTGTTGTC 59.875 47.826 0.00 0.00 0.00 3.18
587 720 1.566018 GCTTGCCGTGAAGCGTTAGT 61.566 55.000 0.38 0.00 39.10 2.24
604 737 5.563842 CGTTAGTTTTGGCTGATGATCTTC 58.436 41.667 1.67 1.67 0.00 2.87
654 787 3.540211 CCAAGAGGCTGTGAACGAT 57.460 52.632 0.00 0.00 0.00 3.73
716 849 7.910162 AGTACATGAAATAACGAATCATTGCAC 59.090 33.333 0.00 0.00 31.65 4.57
734 867 5.275067 TGCACCAGTTTTATTTCTTGCTT 57.725 34.783 0.00 0.00 0.00 3.91
766 906 7.630242 TTCGAGCATAGGAATTTCAATTTCT 57.370 32.000 0.00 0.00 37.90 2.52
768 908 8.908786 TCGAGCATAGGAATTTCAATTTCTAT 57.091 30.769 7.13 7.13 44.36 1.98
853 997 2.489985 CCCATGACCCAAACCTTGTACA 60.490 50.000 0.00 0.00 0.00 2.90
859 1003 6.073447 TGACCCAAACCTTGTACATATGAT 57.927 37.500 10.38 0.00 0.00 2.45
923 1068 8.581253 AAAAGAAAACCTCTCTCTCAAAAAGA 57.419 30.769 0.00 0.00 31.02 2.52
928 1073 9.295214 GAAAACCTCTCTCTCAAAAAGAAAAAG 57.705 33.333 0.00 0.00 32.23 2.27
929 1074 8.581253 AAACCTCTCTCTCAAAAAGAAAAAGA 57.419 30.769 0.00 0.00 32.23 2.52
1260 1408 3.338126 GACGGAGGCGCTCGAGAAA 62.338 63.158 18.75 0.00 0.00 2.52
1447 1597 9.221775 CGATTTGGTACAGATTTAAGTTATTGC 57.778 33.333 0.00 0.00 42.39 3.56
1478 1628 2.157668 GCAGTGGTACGATCTGTTTGTG 59.842 50.000 10.60 0.00 0.00 3.33
1482 1632 3.250040 GTGGTACGATCTGTTTGTGCTTT 59.750 43.478 0.00 0.00 0.00 3.51
1483 1633 3.249799 TGGTACGATCTGTTTGTGCTTTG 59.750 43.478 0.00 0.00 0.00 2.77
1509 1659 4.283978 TGGAAATGGTGATGAAATGTTGCT 59.716 37.500 0.00 0.00 0.00 3.91
1531 1681 6.262944 TGCTGATGTTTGATTTCTGTAGTTGT 59.737 34.615 0.00 0.00 0.00 3.32
1533 1683 7.746475 GCTGATGTTTGATTTCTGTAGTTGTAC 59.254 37.037 0.00 0.00 0.00 2.90
1551 1701 8.142485 AGTTGTACTCTTTAGGTAGCCAATTA 57.858 34.615 0.00 0.00 0.00 1.40
1557 1707 8.090788 ACTCTTTAGGTAGCCAATTATTCTGA 57.909 34.615 0.00 0.00 0.00 3.27
1558 1708 8.718656 ACTCTTTAGGTAGCCAATTATTCTGAT 58.281 33.333 0.00 0.00 0.00 2.90
1559 1709 8.908786 TCTTTAGGTAGCCAATTATTCTGATG 57.091 34.615 0.00 0.00 0.00 3.07
1560 1710 8.713971 TCTTTAGGTAGCCAATTATTCTGATGA 58.286 33.333 0.00 0.00 0.00 2.92
1618 1775 8.838649 ACTGCTGGTTAATAATTTTAGGGATT 57.161 30.769 0.00 0.00 0.00 3.01
1629 1786 6.405278 AATTTTAGGGATTGCCTATTTCCG 57.595 37.500 4.61 0.00 0.00 4.30
1683 1840 2.277084 GTCGCCTATTTCACGTTGGAT 58.723 47.619 0.00 0.00 0.00 3.41
1684 1841 2.030457 GTCGCCTATTTCACGTTGGATG 59.970 50.000 0.00 0.00 0.00 3.51
1685 1842 2.006888 CGCCTATTTCACGTTGGATGT 58.993 47.619 0.00 0.00 0.00 3.06
1786 1963 3.507622 GCAGTTTGGTTGGCTTAGAAGAT 59.492 43.478 0.00 0.00 0.00 2.40
1892 2260 9.473640 GCATGTAGTTTAGGGTCTTAATACTAC 57.526 37.037 0.00 0.00 37.85 2.73
1944 2321 2.093890 CACTGTGCCATCTTATTGCCA 58.906 47.619 0.00 0.00 0.00 4.92
2012 2393 7.113544 GCACTTTATCTTGTTTACAAACTCAGC 59.886 37.037 6.41 0.00 39.59 4.26
2014 2395 3.602390 TCTTGTTTACAAACTCAGCGC 57.398 42.857 0.00 0.00 39.59 5.92
2050 2431 9.775854 ATATCTGTTCTTGAGATGTTAGATTGG 57.224 33.333 0.00 0.00 32.32 3.16
2126 2507 9.474920 GAGTATATAATAGATCTGAGCCATTGC 57.525 37.037 5.18 0.00 37.95 3.56
2194 2575 4.708177 GTCCATGAAAGAGCTAGGCATTA 58.292 43.478 0.00 0.00 0.00 1.90
2197 2578 6.264067 GTCCATGAAAGAGCTAGGCATTAAAT 59.736 38.462 0.00 0.00 0.00 1.40
2333 2718 2.037772 ACCCTGGCTGCTATATTTCTCG 59.962 50.000 0.00 0.00 0.00 4.04
2382 2770 7.582435 CGAGAGCATTAGTTCTTAACTTTGA 57.418 36.000 0.00 0.00 42.81 2.69
2457 2845 1.956170 CGACTATGGGGTGCGCATC 60.956 63.158 15.91 14.71 38.05 3.91
2581 2969 6.403309 CCATTCATATGCTCGATCAAAGATGG 60.403 42.308 0.00 0.40 0.00 3.51
2736 3124 5.990996 GGAATTGAAGAGGCAAAATGTTTCA 59.009 36.000 0.00 0.00 0.00 2.69
2790 3178 0.815213 CGTCGGTTGCATCCATGGAT 60.815 55.000 22.15 22.15 34.81 3.41
2793 3181 1.202687 TCGGTTGCATCCATGGATCTC 60.203 52.381 24.93 18.52 31.62 2.75
2798 3186 0.673022 GCATCCATGGATCTCGAGGC 60.673 60.000 24.93 19.06 31.62 4.70
2799 3187 0.389556 CATCCATGGATCTCGAGGCG 60.390 60.000 24.93 7.15 31.62 5.52
2804 3192 0.824109 ATGGATCTCGAGGCGTTCAA 59.176 50.000 13.56 0.00 0.00 2.69
2835 3223 5.127682 TCTCGATGAGATGTCAAAAGATCCA 59.872 40.000 0.00 0.00 35.88 3.41
2865 3253 0.902531 AAGGATGGACACTGTACCGG 59.097 55.000 0.00 0.00 0.00 5.28
2915 3303 4.522971 GCTTGTTAGCTCGGGGAG 57.477 61.111 0.00 0.00 44.27 4.30
2919 3307 1.275291 CTTGTTAGCTCGGGGAGTTCA 59.725 52.381 0.00 0.00 31.39 3.18
2929 3317 0.476771 GGGGAGTTCACTGGTGGAAA 59.523 55.000 0.70 0.00 0.00 3.13
3030 3418 5.368989 GACAGGGTAAAGGACATATGGAAG 58.631 45.833 7.80 0.00 0.00 3.46
3046 3434 1.137872 GGAAGTCGATGCAGATGACCT 59.862 52.381 10.97 0.34 33.09 3.85
3054 3442 0.041684 TGCAGATGACCTCCCAGAGA 59.958 55.000 0.00 0.00 0.00 3.10
3210 3598 0.327259 TTGATGCTCTTCTGGCTGCT 59.673 50.000 0.00 0.00 0.00 4.24
3219 3607 3.060615 CTGGCTGCTGGCTTCACC 61.061 66.667 17.87 0.00 41.46 4.02
3368 3764 7.649533 TTTGGTACGAGAATAATGGACTCTA 57.350 36.000 0.00 0.00 0.00 2.43
3397 3793 8.505625 ACAGTTTATGCTTTATTTTGGCAAATG 58.494 29.630 14.29 6.22 39.46 2.32
3413 3809 8.462589 TTGGCAAATGCAATCTGACTATATTA 57.537 30.769 7.80 0.00 44.36 0.98
3426 3822 5.321927 TGACTATATTATCAGGTCCAGCGA 58.678 41.667 0.00 0.00 0.00 4.93
3435 3831 0.530650 AGGTCCAGCGACGCATTATG 60.531 55.000 23.70 11.25 40.17 1.90
3461 3857 9.190317 GGAAAGAAATATATTTTCAGGTCCAGT 57.810 33.333 11.92 0.00 33.57 4.00
3510 3907 1.069703 CATGTATGCAGCGGTGTATGC 60.070 52.381 25.47 24.02 42.86 3.14
3511 3908 0.813610 TGTATGCAGCGGTGTATGCC 60.814 55.000 25.47 16.61 41.85 4.40
3512 3909 0.813610 GTATGCAGCGGTGTATGCCA 60.814 55.000 25.47 11.01 41.85 4.92
3513 3910 0.813610 TATGCAGCGGTGTATGCCAC 60.814 55.000 25.47 3.95 41.85 5.01
3514 3911 3.864686 GCAGCGGTGTATGCCACG 61.865 66.667 17.07 0.00 45.52 4.94
3515 3912 2.125713 CAGCGGTGTATGCCACGA 60.126 61.111 6.41 0.00 45.52 4.35
3517 3914 1.089481 CAGCGGTGTATGCCACGATT 61.089 55.000 6.41 0.00 45.52 3.34
3518 3915 0.392461 AGCGGTGTATGCCACGATTT 60.392 50.000 0.00 0.00 45.52 2.17
3520 3917 1.793714 GCGGTGTATGCCACGATTTTG 60.794 52.381 0.00 0.00 45.52 2.44
3521 3918 1.466950 CGGTGTATGCCACGATTTTGT 59.533 47.619 0.00 0.00 45.52 2.83
3522 3919 2.673862 CGGTGTATGCCACGATTTTGTA 59.326 45.455 0.00 0.00 45.52 2.41
3523 3920 3.242284 CGGTGTATGCCACGATTTTGTAG 60.242 47.826 0.00 0.00 45.52 2.74
3525 3922 3.126171 GTGTATGCCACGATTTTGTAGCA 59.874 43.478 0.00 0.00 40.62 3.49
3528 3925 0.521291 GCCACGATTTTGTAGCAGCA 59.479 50.000 0.00 0.00 0.00 4.41
3540 3937 3.495543 GCAGCAGCTAGGCAGTTC 58.504 61.111 0.00 0.00 37.91 3.01
3541 3938 1.078567 GCAGCAGCTAGGCAGTTCT 60.079 57.895 0.00 0.00 37.91 3.01
3542 3939 1.367599 GCAGCAGCTAGGCAGTTCTG 61.368 60.000 0.00 0.00 37.91 3.02
3543 3940 3.495543 GCAGCTAGGCAGTTCTGC 58.504 61.111 15.41 15.41 43.95 4.26
3545 3942 3.238232 CAGCTAGGCAGTTCTGCAA 57.762 52.632 23.23 11.69 36.33 4.08
3546 3943 1.085091 CAGCTAGGCAGTTCTGCAAG 58.915 55.000 23.23 19.56 36.33 4.01
3548 3945 0.676151 GCTAGGCAGTTCTGCAAGCT 60.676 55.000 27.91 18.74 40.16 3.74
3549 3946 1.818642 CTAGGCAGTTCTGCAAGCTT 58.181 50.000 23.23 0.00 36.33 3.74
3550 3947 2.157738 CTAGGCAGTTCTGCAAGCTTT 58.842 47.619 23.23 6.73 36.33 3.51
3551 3948 0.672342 AGGCAGTTCTGCAAGCTTTG 59.328 50.000 23.23 0.00 36.33 2.77
3576 3979 3.495543 GCAGCAGCTAGGCAGTTC 58.504 61.111 0.00 0.00 37.91 3.01
3601 4004 2.153913 CTTTGCTAAGCTGCGTCGT 58.846 52.632 0.00 0.00 35.36 4.34
3602 4005 0.179240 CTTTGCTAAGCTGCGTCGTG 60.179 55.000 0.00 0.00 35.36 4.35
3603 4006 1.565156 TTTGCTAAGCTGCGTCGTGG 61.565 55.000 0.00 0.00 35.36 4.94
3604 4007 3.854459 GCTAAGCTGCGTCGTGGC 61.854 66.667 0.00 0.00 0.00 5.01
3605 4008 3.188786 CTAAGCTGCGTCGTGGCC 61.189 66.667 0.00 0.00 0.00 5.36
3613 4016 4.415332 CGTCGTGGCCGTAGCACT 62.415 66.667 0.00 0.00 42.56 4.40
3614 4017 2.506438 GTCGTGGCCGTAGCACTC 60.506 66.667 0.00 0.00 42.56 3.51
3615 4018 3.755628 TCGTGGCCGTAGCACTCC 61.756 66.667 0.00 0.00 42.56 3.85
3616 4019 4.814294 CGTGGCCGTAGCACTCCC 62.814 72.222 0.00 0.00 42.56 4.30
3617 4020 4.468689 GTGGCCGTAGCACTCCCC 62.469 72.222 0.00 0.00 42.56 4.81
3620 4023 3.142838 GCCGTAGCACTCCCCGTA 61.143 66.667 0.00 0.00 39.53 4.02
3621 4024 2.803479 CCGTAGCACTCCCCGTAC 59.197 66.667 0.00 0.00 0.00 3.67
3622 4025 1.751927 CCGTAGCACTCCCCGTACT 60.752 63.158 0.00 0.00 0.00 2.73
3623 4026 1.432251 CGTAGCACTCCCCGTACTG 59.568 63.158 0.00 0.00 0.00 2.74
3624 4027 1.141234 GTAGCACTCCCCGTACTGC 59.859 63.158 0.00 0.00 0.00 4.40
3625 4028 1.304630 TAGCACTCCCCGTACTGCA 60.305 57.895 5.46 0.00 31.71 4.41
3626 4029 1.320344 TAGCACTCCCCGTACTGCAG 61.320 60.000 13.48 13.48 31.71 4.41
3627 4030 2.943978 GCACTCCCCGTACTGCAGT 61.944 63.158 25.12 25.12 0.00 4.40
3628 4031 1.601419 GCACTCCCCGTACTGCAGTA 61.601 60.000 22.67 22.67 0.00 2.74
3629 4032 1.112113 CACTCCCCGTACTGCAGTAT 58.888 55.000 28.37 8.91 32.54 2.12
3630 4033 1.112113 ACTCCCCGTACTGCAGTATG 58.888 55.000 31.07 31.07 37.29 2.39
3639 4042 5.637104 CGTACTGCAGTATGGTTACATTC 57.363 43.478 30.60 14.01 38.53 2.67
3640 4043 4.206404 CGTACTGCAGTATGGTTACATTCG 59.794 45.833 30.60 20.42 38.53 3.34
3641 4044 3.531538 ACTGCAGTATGGTTACATTCGG 58.468 45.455 20.16 0.00 38.53 4.30
3642 4045 2.872245 CTGCAGTATGGTTACATTCGGG 59.128 50.000 5.25 0.00 38.53 5.14
3643 4046 2.502130 TGCAGTATGGTTACATTCGGGA 59.498 45.455 0.00 0.00 38.53 5.14
3644 4047 3.135712 TGCAGTATGGTTACATTCGGGAT 59.864 43.478 0.00 0.00 38.53 3.85
3645 4048 4.134563 GCAGTATGGTTACATTCGGGATT 58.865 43.478 0.00 0.00 38.53 3.01
3646 4049 5.163290 TGCAGTATGGTTACATTCGGGATTA 60.163 40.000 0.00 0.00 38.53 1.75
3647 4050 5.408604 GCAGTATGGTTACATTCGGGATTAG 59.591 44.000 0.00 0.00 38.53 1.73
3648 4051 6.740401 GCAGTATGGTTACATTCGGGATTAGA 60.740 42.308 0.00 0.00 38.53 2.10
3649 4052 7.386851 CAGTATGGTTACATTCGGGATTAGAT 58.613 38.462 0.00 0.00 38.53 1.98
3650 4053 7.878127 CAGTATGGTTACATTCGGGATTAGATT 59.122 37.037 0.00 0.00 38.53 2.40
3651 4054 8.437575 AGTATGGTTACATTCGGGATTAGATTT 58.562 33.333 0.00 0.00 38.53 2.17
3652 4055 9.063615 GTATGGTTACATTCGGGATTAGATTTT 57.936 33.333 0.00 0.00 38.53 1.82
3653 4056 7.328277 TGGTTACATTCGGGATTAGATTTTG 57.672 36.000 0.00 0.00 0.00 2.44
3654 4057 6.887545 TGGTTACATTCGGGATTAGATTTTGT 59.112 34.615 0.00 0.00 0.00 2.83
3655 4058 7.394923 TGGTTACATTCGGGATTAGATTTTGTT 59.605 33.333 0.00 0.00 0.00 2.83
3656 4059 8.895737 GGTTACATTCGGGATTAGATTTTGTTA 58.104 33.333 0.00 0.00 0.00 2.41
3665 4068 9.730420 CGGGATTAGATTTTGTTATAAACTTGG 57.270 33.333 0.00 0.00 0.00 3.61
3666 4069 9.529325 GGGATTAGATTTTGTTATAAACTTGGC 57.471 33.333 0.00 0.00 0.00 4.52
3671 4074 8.776376 AGATTTTGTTATAAACTTGGCATTGG 57.224 30.769 0.00 0.00 0.00 3.16
3672 4075 6.793492 TTTTGTTATAAACTTGGCATTGGC 57.207 33.333 2.73 2.73 40.13 4.52
3673 4076 5.736951 TTGTTATAAACTTGGCATTGGCT 57.263 34.783 11.84 0.00 40.87 4.75
3674 4077 6.842437 TTGTTATAAACTTGGCATTGGCTA 57.158 33.333 11.84 2.86 40.87 3.93
3675 4078 6.842437 TGTTATAAACTTGGCATTGGCTAA 57.158 33.333 11.84 3.75 38.25 3.09
3689 4092 3.354131 GCTAAGAAGCCTCCGTGAG 57.646 57.895 0.00 0.00 43.40 3.51
3690 4093 0.533032 GCTAAGAAGCCTCCGTGAGT 59.467 55.000 1.12 0.00 43.40 3.41
3691 4094 1.749634 GCTAAGAAGCCTCCGTGAGTA 59.250 52.381 1.12 0.00 43.40 2.59
3692 4095 2.165845 GCTAAGAAGCCTCCGTGAGTAA 59.834 50.000 1.12 0.00 43.40 2.24
3693 4096 3.181474 GCTAAGAAGCCTCCGTGAGTAAT 60.181 47.826 1.12 0.00 43.40 1.89
3694 4097 2.969628 AGAAGCCTCCGTGAGTAATG 57.030 50.000 1.12 0.00 0.00 1.90
3695 4098 2.457598 AGAAGCCTCCGTGAGTAATGA 58.542 47.619 1.12 0.00 0.00 2.57
3696 4099 2.428890 AGAAGCCTCCGTGAGTAATGAG 59.571 50.000 1.12 0.00 0.00 2.90
3697 4100 2.145397 AGCCTCCGTGAGTAATGAGA 57.855 50.000 0.00 0.00 0.00 3.27
3698 4101 2.457598 AGCCTCCGTGAGTAATGAGAA 58.542 47.619 0.00 0.00 0.00 2.87
3699 4102 3.034635 AGCCTCCGTGAGTAATGAGAAT 58.965 45.455 0.00 0.00 0.00 2.40
3700 4103 3.068873 AGCCTCCGTGAGTAATGAGAATC 59.931 47.826 0.00 0.00 0.00 2.52
3701 4104 3.068873 GCCTCCGTGAGTAATGAGAATCT 59.931 47.826 0.00 0.00 34.92 2.40
3702 4105 4.794655 GCCTCCGTGAGTAATGAGAATCTC 60.795 50.000 2.75 2.75 34.92 2.75
3703 4106 4.261825 CCTCCGTGAGTAATGAGAATCTCC 60.262 50.000 7.91 0.00 34.92 3.71
3704 4107 4.537751 TCCGTGAGTAATGAGAATCTCCT 58.462 43.478 7.91 0.00 34.92 3.69
3705 4108 4.956700 TCCGTGAGTAATGAGAATCTCCTT 59.043 41.667 7.91 6.90 34.92 3.36
3706 4109 5.422331 TCCGTGAGTAATGAGAATCTCCTTT 59.578 40.000 7.91 4.49 34.92 3.11
3707 4110 6.070767 TCCGTGAGTAATGAGAATCTCCTTTT 60.071 38.462 7.91 2.07 34.92 2.27
3708 4111 6.256757 CCGTGAGTAATGAGAATCTCCTTTTC 59.743 42.308 7.91 6.66 34.92 2.29
3709 4112 6.813649 CGTGAGTAATGAGAATCTCCTTTTCA 59.186 38.462 7.91 8.85 32.98 2.69
3710 4113 7.201478 CGTGAGTAATGAGAATCTCCTTTTCAC 60.201 40.741 21.33 21.33 33.67 3.18
3711 4114 7.065204 GTGAGTAATGAGAATCTCCTTTTCACC 59.935 40.741 21.00 11.85 32.53 4.02
3712 4115 6.418946 AGTAATGAGAATCTCCTTTTCACCC 58.581 40.000 7.91 0.00 31.39 4.61
3713 4116 3.334583 TGAGAATCTCCTTTTCACCCG 57.665 47.619 7.91 0.00 34.92 5.28
3714 4117 2.010497 GAGAATCTCCTTTTCACCCGC 58.990 52.381 0.00 0.00 0.00 6.13
3715 4118 1.351017 AGAATCTCCTTTTCACCCGCA 59.649 47.619 0.00 0.00 0.00 5.69
3716 4119 2.159382 GAATCTCCTTTTCACCCGCAA 58.841 47.619 0.00 0.00 0.00 4.85
3717 4120 2.286365 ATCTCCTTTTCACCCGCAAA 57.714 45.000 0.00 0.00 0.00 3.68
3718 4121 2.060050 TCTCCTTTTCACCCGCAAAA 57.940 45.000 0.00 0.00 0.00 2.44
3719 4122 2.379972 TCTCCTTTTCACCCGCAAAAA 58.620 42.857 0.00 0.00 0.00 1.94
3801 4204 4.819630 ACGAAGTTCAGCAAGGAATAAACA 59.180 37.500 3.32 0.00 37.78 2.83
3806 4209 2.760092 TCAGCAAGGAATAAACATGCCC 59.240 45.455 0.00 0.00 37.73 5.36
3810 4213 3.364549 CAAGGAATAAACATGCCCCAGA 58.635 45.455 0.00 0.00 0.00 3.86
3812 4215 5.139727 CAAGGAATAAACATGCCCCAGATA 58.860 41.667 0.00 0.00 0.00 1.98
3825 4228 1.768870 CCCAGATACCAACTACCCAGG 59.231 57.143 0.00 0.00 0.00 4.45
3826 4229 2.478292 CCAGATACCAACTACCCAGGT 58.522 52.381 0.00 0.00 39.41 4.00
3827 4230 3.631605 CCCAGATACCAACTACCCAGGTA 60.632 52.174 0.00 0.00 41.72 3.08
3828 4231 3.387050 CCAGATACCAACTACCCAGGTAC 59.613 52.174 0.00 0.00 40.43 3.34
3829 4232 4.287552 CAGATACCAACTACCCAGGTACT 58.712 47.826 0.00 0.00 40.43 2.73
3925 4334 1.736645 CGGTACAACTGCTCCACCG 60.737 63.158 0.00 0.00 45.25 4.94
3928 4337 3.248446 TACAACTGCTCCACCGGGC 62.248 63.158 6.32 0.00 0.00 6.13
3929 4338 4.641645 CAACTGCTCCACCGGGCA 62.642 66.667 6.32 4.38 36.94 5.36
3949 4358 1.709147 GGCGACATGACATCACCTGC 61.709 60.000 0.00 0.00 0.00 4.85
3962 4371 1.073964 CACCTGCTCGATCACACTTG 58.926 55.000 0.00 0.00 0.00 3.16
3977 4386 2.880890 ACACTTGAGCATGTTGTTCTCC 59.119 45.455 0.00 0.00 0.00 3.71
3995 4404 1.600636 CATGCTCCACACCGTTGGT 60.601 57.895 0.00 0.00 37.93 3.67
3996 4405 1.302511 ATGCTCCACACCGTTGGTC 60.303 57.895 0.00 0.00 37.93 4.02
3997 4406 2.668550 GCTCCACACCGTTGGTCC 60.669 66.667 0.00 0.00 37.93 4.46
3998 4407 2.825982 CTCCACACCGTTGGTCCA 59.174 61.111 0.00 0.00 37.93 4.02
3999 4408 1.301716 CTCCACACCGTTGGTCCAG 60.302 63.158 0.00 0.00 37.93 3.86
4000 4409 2.281484 CCACACCGTTGGTCCAGG 60.281 66.667 0.00 0.00 31.02 4.45
4001 4410 2.813726 CCACACCGTTGGTCCAGGA 61.814 63.158 4.17 0.00 31.02 3.86
4002 4411 1.301716 CACACCGTTGGTCCAGGAG 60.302 63.158 4.17 0.00 31.02 3.69
4003 4412 2.347490 CACCGTTGGTCCAGGAGG 59.653 66.667 4.17 6.06 31.02 4.30
4004 4413 2.928396 ACCGTTGGTCCAGGAGGG 60.928 66.667 4.17 2.71 34.83 4.30
4005 4414 2.606519 CCGTTGGTCCAGGAGGGA 60.607 66.667 0.00 0.00 45.89 4.20
4015 4424 3.438131 TCCAGGAGGGAAATATCTGGT 57.562 47.619 0.00 0.00 44.80 4.00
4016 4425 3.048600 TCCAGGAGGGAAATATCTGGTG 58.951 50.000 0.00 0.00 44.80 4.17
4017 4426 2.487986 CCAGGAGGGAAATATCTGGTGC 60.488 54.545 0.00 0.00 39.90 5.01
4018 4427 2.173356 CAGGAGGGAAATATCTGGTGCA 59.827 50.000 0.00 0.00 0.00 4.57
4019 4428 2.173569 AGGAGGGAAATATCTGGTGCAC 59.826 50.000 8.80 8.80 0.00 4.57
4020 4429 2.576615 GAGGGAAATATCTGGTGCACC 58.423 52.381 29.67 29.67 0.00 5.01
4021 4430 1.134098 AGGGAAATATCTGGTGCACCG 60.134 52.381 30.07 23.48 39.43 4.94
4022 4431 1.308998 GGAAATATCTGGTGCACCGG 58.691 55.000 35.06 35.06 43.86 5.28
4027 4436 3.241530 TCTGGTGCACCGGAGCTT 61.242 61.111 38.27 0.00 46.04 3.74
4028 4437 3.052082 CTGGTGCACCGGAGCTTG 61.052 66.667 37.13 13.64 45.36 4.01
4029 4438 3.832237 CTGGTGCACCGGAGCTTGT 62.832 63.158 37.13 0.00 45.36 3.16
4030 4439 3.357079 GGTGCACCGGAGCTTGTG 61.357 66.667 22.49 4.12 34.99 3.33
4031 4440 3.357079 GTGCACCGGAGCTTGTGG 61.357 66.667 24.52 6.27 34.99 4.17
4032 4441 3.872603 TGCACCGGAGCTTGTGGT 61.873 61.111 24.52 6.83 36.10 4.16
4034 4443 3.357079 CACCGGAGCTTGTGGTGC 61.357 66.667 9.46 0.00 45.85 5.01
4035 4444 3.560251 ACCGGAGCTTGTGGTGCT 61.560 61.111 9.46 0.00 44.24 4.40
4036 4445 2.214216 ACCGGAGCTTGTGGTGCTA 61.214 57.895 9.46 0.00 41.30 3.49
4037 4446 1.741770 CCGGAGCTTGTGGTGCTAC 60.742 63.158 0.00 0.00 41.30 3.58
4038 4447 1.741770 CGGAGCTTGTGGTGCTACC 60.742 63.158 0.00 0.00 41.30 3.18
4039 4448 1.741770 GGAGCTTGTGGTGCTACCG 60.742 63.158 0.00 0.00 42.58 4.02
4040 4449 1.741770 GAGCTTGTGGTGCTACCGG 60.742 63.158 0.00 0.00 42.58 5.28
4041 4450 2.032071 GCTTGTGGTGCTACCGGT 59.968 61.111 13.98 13.98 42.58 5.28
4042 4451 2.325082 GCTTGTGGTGCTACCGGTG 61.325 63.158 19.93 8.61 42.58 4.94
4043 4452 1.070786 CTTGTGGTGCTACCGGTGT 59.929 57.895 19.93 0.00 42.58 4.16
4044 4453 0.319083 CTTGTGGTGCTACCGGTGTA 59.681 55.000 19.93 3.82 42.58 2.90
4045 4454 0.033781 TTGTGGTGCTACCGGTGTAC 59.966 55.000 19.93 16.13 42.58 2.90
4046 4455 1.079612 GTGGTGCTACCGGTGTACC 60.080 63.158 26.02 26.02 42.58 3.34
4059 4468 3.814005 GGTGTACCGGACTCATATTGT 57.186 47.619 9.46 0.00 0.00 2.71
4060 4469 3.454375 GGTGTACCGGACTCATATTGTG 58.546 50.000 9.46 0.00 0.00 3.33
4061 4470 2.864343 GTGTACCGGACTCATATTGTGC 59.136 50.000 9.46 0.00 0.00 4.57
4062 4471 2.764010 TGTACCGGACTCATATTGTGCT 59.236 45.455 9.46 0.00 0.00 4.40
4063 4472 3.196901 TGTACCGGACTCATATTGTGCTT 59.803 43.478 9.46 0.00 0.00 3.91
4064 4473 3.350219 ACCGGACTCATATTGTGCTTT 57.650 42.857 9.46 0.00 0.00 3.51
4065 4474 3.686016 ACCGGACTCATATTGTGCTTTT 58.314 40.909 9.46 0.00 0.00 2.27
4066 4475 4.839121 ACCGGACTCATATTGTGCTTTTA 58.161 39.130 9.46 0.00 0.00 1.52
4067 4476 5.250200 ACCGGACTCATATTGTGCTTTTAA 58.750 37.500 9.46 0.00 0.00 1.52
4068 4477 5.708230 ACCGGACTCATATTGTGCTTTTAAA 59.292 36.000 9.46 0.00 0.00 1.52
4069 4478 6.207810 ACCGGACTCATATTGTGCTTTTAAAA 59.792 34.615 9.46 0.00 0.00 1.52
4070 4479 7.093945 ACCGGACTCATATTGTGCTTTTAAAAT 60.094 33.333 9.46 0.00 0.00 1.82
4071 4480 8.402472 CCGGACTCATATTGTGCTTTTAAAATA 58.598 33.333 0.00 0.00 0.00 1.40
4072 4481 9.950680 CGGACTCATATTGTGCTTTTAAAATAT 57.049 29.630 0.09 0.00 0.00 1.28
4101 4510 8.523915 AAAAATATTCTATGACATCCTGTGCA 57.476 30.769 0.00 0.00 0.00 4.57
4102 4511 7.502120 AAATATTCTATGACATCCTGTGCAC 57.498 36.000 10.75 10.75 0.00 4.57
4103 4512 2.988010 TCTATGACATCCTGTGCACC 57.012 50.000 15.69 0.00 0.00 5.01
4104 4513 1.136891 TCTATGACATCCTGTGCACCG 59.863 52.381 15.69 8.02 0.00 4.94
4105 4514 0.177836 TATGACATCCTGTGCACCGG 59.822 55.000 20.42 20.42 0.00 5.28
4106 4515 1.841302 ATGACATCCTGTGCACCGGT 61.841 55.000 24.51 0.00 0.00 5.28
4107 4516 1.188871 TGACATCCTGTGCACCGGTA 61.189 55.000 24.51 13.21 0.00 4.02
4108 4517 0.460284 GACATCCTGTGCACCGGTAG 60.460 60.000 24.51 19.67 0.00 3.18
4109 4518 1.815421 CATCCTGTGCACCGGTAGC 60.815 63.158 24.51 14.59 0.00 3.58
4110 4519 2.290287 ATCCTGTGCACCGGTAGCA 61.290 57.895 24.51 22.47 40.19 3.49
4111 4520 1.626356 ATCCTGTGCACCGGTAGCAT 61.626 55.000 26.82 9.88 44.79 3.79
4112 4521 1.815421 CCTGTGCACCGGTAGCATC 60.815 63.158 26.82 21.08 44.79 3.91
4113 4522 1.079197 CTGTGCACCGGTAGCATCA 60.079 57.895 26.82 23.34 44.79 3.07
4114 4523 1.361668 CTGTGCACCGGTAGCATCAC 61.362 60.000 26.82 19.68 44.79 3.06
4115 4524 1.375396 GTGCACCGGTAGCATCACA 60.375 57.895 26.82 8.03 44.79 3.58
4116 4525 0.953471 GTGCACCGGTAGCATCACAA 60.953 55.000 26.82 7.44 44.79 3.33
4117 4526 0.673333 TGCACCGGTAGCATCACAAG 60.673 55.000 22.47 2.59 37.02 3.16
4118 4527 0.673644 GCACCGGTAGCATCACAAGT 60.674 55.000 19.85 0.00 0.00 3.16
4119 4528 1.078709 CACCGGTAGCATCACAAGTG 58.921 55.000 6.87 0.00 0.00 3.16
4120 4529 0.673644 ACCGGTAGCATCACAAGTGC 60.674 55.000 4.49 0.00 42.81 4.40
4121 4530 1.695893 CCGGTAGCATCACAAGTGCG 61.696 60.000 0.00 0.00 46.86 5.34
4122 4531 1.695893 CGGTAGCATCACAAGTGCGG 61.696 60.000 0.00 0.00 46.86 5.69
4123 4532 1.369091 GGTAGCATCACAAGTGCGGG 61.369 60.000 0.00 0.00 46.86 6.13
4124 4533 0.673644 GTAGCATCACAAGTGCGGGT 60.674 55.000 0.00 0.00 46.86 5.28
4125 4534 0.673333 TAGCATCACAAGTGCGGGTG 60.673 55.000 0.00 0.00 46.86 4.61
4126 4535 2.562912 CATCACAAGTGCGGGTGC 59.437 61.111 0.00 0.00 43.20 5.01
4136 4545 2.267642 GCGGGTGCACCAGATACA 59.732 61.111 36.08 0.00 42.15 2.29
4137 4546 1.153168 GCGGGTGCACCAGATACAT 60.153 57.895 36.08 0.00 42.15 2.29
4138 4547 0.748005 GCGGGTGCACCAGATACATT 60.748 55.000 36.08 0.00 42.15 2.71
4139 4548 1.299541 CGGGTGCACCAGATACATTC 58.700 55.000 35.78 14.93 40.22 2.67
4140 4549 1.680338 GGGTGCACCAGATACATTCC 58.320 55.000 35.78 11.80 39.85 3.01
4141 4550 1.212935 GGGTGCACCAGATACATTCCT 59.787 52.381 35.78 0.00 39.85 3.36
4142 4551 2.357154 GGGTGCACCAGATACATTCCTT 60.357 50.000 35.78 0.00 39.85 3.36
4143 4552 3.356290 GGTGCACCAGATACATTCCTTT 58.644 45.455 31.23 0.00 35.64 3.11
4144 4553 4.523083 GGTGCACCAGATACATTCCTTTA 58.477 43.478 31.23 0.00 35.64 1.85
4145 4554 4.576463 GGTGCACCAGATACATTCCTTTAG 59.424 45.833 31.23 0.00 35.64 1.85
4146 4555 5.186198 GTGCACCAGATACATTCCTTTAGT 58.814 41.667 5.22 0.00 0.00 2.24
4155 4564 6.901300 AGATACATTCCTTTAGTCCAGGTGTA 59.099 38.462 0.00 0.00 31.09 2.90
4179 4588 0.527565 GCACCGGCAAGACATGATTT 59.472 50.000 0.00 0.00 40.72 2.17
4180 4589 1.733389 GCACCGGCAAGACATGATTTG 60.733 52.381 0.00 4.63 40.72 2.32
4185 4594 2.973694 GCAAGACATGATTTGCCCAT 57.026 45.000 20.65 0.00 42.88 4.00
4186 4595 2.546778 GCAAGACATGATTTGCCCATG 58.453 47.619 20.65 0.00 42.88 3.66
4214 4623 2.563471 AAACCAGTCGCGATCTAGAC 57.437 50.000 14.06 0.00 37.63 2.59
4223 4632 1.749153 GCGATCTAGACGAGCTTGTC 58.251 55.000 24.38 24.38 39.21 3.18
4235 4644 4.749976 ACGAGCTTGTCTAAGGATTTCTC 58.250 43.478 0.00 0.00 34.40 2.87
4278 4687 2.817839 GCTACCACACCCACCATTTTCT 60.818 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.082408 TGGATCACAGTTCGTTACCACTAG 60.082 45.833 0.00 0.00 0.00 2.57
1 2 3.827876 TGGATCACAGTTCGTTACCACTA 59.172 43.478 0.00 0.00 0.00 2.74
3 4 3.034721 TGGATCACAGTTCGTTACCAC 57.965 47.619 0.00 0.00 0.00 4.16
4 5 3.513912 AGATGGATCACAGTTCGTTACCA 59.486 43.478 0.00 0.00 0.00 3.25
5 6 4.113354 GAGATGGATCACAGTTCGTTACC 58.887 47.826 0.00 0.00 0.00 2.85
6 7 4.113354 GGAGATGGATCACAGTTCGTTAC 58.887 47.826 0.00 0.00 0.00 2.50
7 8 3.132289 GGGAGATGGATCACAGTTCGTTA 59.868 47.826 0.00 0.00 0.00 3.18
8 9 2.093447 GGGAGATGGATCACAGTTCGTT 60.093 50.000 0.00 0.00 0.00 3.85
9 10 1.482593 GGGAGATGGATCACAGTTCGT 59.517 52.381 0.00 0.00 0.00 3.85
10 11 1.536922 CGGGAGATGGATCACAGTTCG 60.537 57.143 0.00 0.00 0.00 3.95
11 12 1.482593 ACGGGAGATGGATCACAGTTC 59.517 52.381 0.00 0.00 0.00 3.01
12 13 1.573108 ACGGGAGATGGATCACAGTT 58.427 50.000 0.00 0.00 0.00 3.16
13 14 2.311463 CTACGGGAGATGGATCACAGT 58.689 52.381 0.00 0.00 0.00 3.55
14 15 1.000283 GCTACGGGAGATGGATCACAG 60.000 57.143 0.00 0.00 0.00 3.66
15 16 1.040646 GCTACGGGAGATGGATCACA 58.959 55.000 0.00 0.00 0.00 3.58
16 17 1.040646 TGCTACGGGAGATGGATCAC 58.959 55.000 0.00 0.00 0.00 3.06
17 18 1.620323 CATGCTACGGGAGATGGATCA 59.380 52.381 0.00 0.00 0.00 2.92
18 19 1.620819 ACATGCTACGGGAGATGGATC 59.379 52.381 0.00 0.00 0.00 3.36
19 20 1.722034 ACATGCTACGGGAGATGGAT 58.278 50.000 0.00 0.00 0.00 3.41
20 21 1.412710 GAACATGCTACGGGAGATGGA 59.587 52.381 0.00 0.00 0.00 3.41
21 22 1.414181 AGAACATGCTACGGGAGATGG 59.586 52.381 0.00 0.00 0.00 3.51
22 23 2.868583 CAAGAACATGCTACGGGAGATG 59.131 50.000 0.00 0.00 0.00 2.90
23 24 2.158900 CCAAGAACATGCTACGGGAGAT 60.159 50.000 0.00 0.00 0.00 2.75
24 25 1.207089 CCAAGAACATGCTACGGGAGA 59.793 52.381 0.00 0.00 0.00 3.71
25 26 1.066143 ACCAAGAACATGCTACGGGAG 60.066 52.381 0.00 0.00 0.00 4.30
26 27 0.981183 ACCAAGAACATGCTACGGGA 59.019 50.000 0.00 0.00 0.00 5.14
27 28 1.468520 CAACCAAGAACATGCTACGGG 59.531 52.381 0.00 0.00 0.00 5.28
28 29 2.151202 ACAACCAAGAACATGCTACGG 58.849 47.619 0.00 0.00 0.00 4.02
29 30 3.498397 AGAACAACCAAGAACATGCTACG 59.502 43.478 0.00 0.00 0.00 3.51
30 31 4.787598 CAGAACAACCAAGAACATGCTAC 58.212 43.478 0.00 0.00 0.00 3.58
31 32 3.253188 GCAGAACAACCAAGAACATGCTA 59.747 43.478 0.00 0.00 0.00 3.49
32 33 2.035066 GCAGAACAACCAAGAACATGCT 59.965 45.455 0.00 0.00 0.00 3.79
33 34 2.397549 GCAGAACAACCAAGAACATGC 58.602 47.619 0.00 0.00 0.00 4.06
34 35 2.653890 CGCAGAACAACCAAGAACATG 58.346 47.619 0.00 0.00 0.00 3.21
35 36 1.001378 GCGCAGAACAACCAAGAACAT 60.001 47.619 0.30 0.00 0.00 2.71
36 37 0.380378 GCGCAGAACAACCAAGAACA 59.620 50.000 0.30 0.00 0.00 3.18
37 38 0.380378 TGCGCAGAACAACCAAGAAC 59.620 50.000 5.66 0.00 0.00 3.01
38 39 1.317613 ATGCGCAGAACAACCAAGAA 58.682 45.000 18.32 0.00 0.00 2.52
39 40 2.076100 CTATGCGCAGAACAACCAAGA 58.924 47.619 18.32 0.00 0.00 3.02
40 41 1.131126 CCTATGCGCAGAACAACCAAG 59.869 52.381 18.32 0.00 0.00 3.61
41 42 1.164411 CCTATGCGCAGAACAACCAA 58.836 50.000 18.32 0.00 0.00 3.67
42 43 0.323302 TCCTATGCGCAGAACAACCA 59.677 50.000 18.32 0.00 0.00 3.67
43 44 1.448985 TTCCTATGCGCAGAACAACC 58.551 50.000 18.32 0.00 0.00 3.77
44 45 3.764885 ATTTCCTATGCGCAGAACAAC 57.235 42.857 18.32 0.00 0.00 3.32
45 46 4.782019 AAATTTCCTATGCGCAGAACAA 57.218 36.364 18.32 3.46 0.00 2.83
46 47 4.782019 AAAATTTCCTATGCGCAGAACA 57.218 36.364 18.32 5.82 0.00 3.18
47 48 7.755582 AATTAAAATTTCCTATGCGCAGAAC 57.244 32.000 18.32 0.00 0.00 3.01
48 49 7.201513 GCAAATTAAAATTTCCTATGCGCAGAA 60.202 33.333 18.32 11.63 36.52 3.02
49 50 6.255453 GCAAATTAAAATTTCCTATGCGCAGA 59.745 34.615 18.32 11.34 36.52 4.26
50 51 6.035866 TGCAAATTAAAATTTCCTATGCGCAG 59.964 34.615 18.32 2.21 36.52 5.18
51 52 5.871524 TGCAAATTAAAATTTCCTATGCGCA 59.128 32.000 14.96 14.96 36.52 6.09
52 53 6.035975 ACTGCAAATTAAAATTTCCTATGCGC 59.964 34.615 0.00 0.00 36.52 6.09
53 54 7.513505 CGACTGCAAATTAAAATTTCCTATGCG 60.514 37.037 0.00 0.23 36.52 4.73
54 55 7.487829 TCGACTGCAAATTAAAATTTCCTATGC 59.512 33.333 0.00 0.40 36.52 3.14
55 56 8.798153 GTCGACTGCAAATTAAAATTTCCTATG 58.202 33.333 8.70 0.00 36.52 2.23
56 57 7.696453 CGTCGACTGCAAATTAAAATTTCCTAT 59.304 33.333 14.70 0.00 36.52 2.57
57 58 7.018826 CGTCGACTGCAAATTAAAATTTCCTA 58.981 34.615 14.70 0.00 36.52 2.94
58 59 5.856455 CGTCGACTGCAAATTAAAATTTCCT 59.144 36.000 14.70 0.00 36.52 3.36
59 60 5.442779 GCGTCGACTGCAAATTAAAATTTCC 60.443 40.000 21.73 0.00 36.52 3.13
60 61 5.116377 TGCGTCGACTGCAAATTAAAATTTC 59.884 36.000 25.30 0.74 39.87 2.17
61 62 4.979197 TGCGTCGACTGCAAATTAAAATTT 59.021 33.333 25.30 0.00 39.87 1.82
62 63 4.381566 GTGCGTCGACTGCAAATTAAAATT 59.618 37.500 27.78 0.00 45.23 1.82
63 64 3.911964 GTGCGTCGACTGCAAATTAAAAT 59.088 39.130 27.78 0.00 45.23 1.82
64 65 3.293262 GTGCGTCGACTGCAAATTAAAA 58.707 40.909 27.78 8.16 45.23 1.52
65 66 2.350007 GGTGCGTCGACTGCAAATTAAA 60.350 45.455 27.78 8.74 45.23 1.52
66 67 1.195900 GGTGCGTCGACTGCAAATTAA 59.804 47.619 27.78 9.32 45.23 1.40
67 68 0.793861 GGTGCGTCGACTGCAAATTA 59.206 50.000 27.78 9.90 45.23 1.40
68 69 1.574428 GGTGCGTCGACTGCAAATT 59.426 52.632 27.78 0.00 45.23 1.82
69 70 2.325082 GGGTGCGTCGACTGCAAAT 61.325 57.895 27.78 0.00 45.23 2.32
70 71 2.089887 TAGGGTGCGTCGACTGCAAA 62.090 55.000 27.78 15.62 45.23 3.68
71 72 2.566570 TAGGGTGCGTCGACTGCAA 61.567 57.895 27.78 15.19 45.23 4.08
72 73 2.986979 TAGGGTGCGTCGACTGCA 60.987 61.111 24.25 24.25 40.70 4.41
73 74 2.506438 GTAGGGTGCGTCGACTGC 60.506 66.667 20.46 20.46 0.00 4.40
74 75 2.181021 GGTAGGGTGCGTCGACTG 59.819 66.667 14.70 8.46 0.00 3.51
75 76 2.803155 TACGGTAGGGTGCGTCGACT 62.803 60.000 14.70 0.00 0.00 4.18
76 77 2.315038 CTACGGTAGGGTGCGTCGAC 62.315 65.000 5.18 5.18 0.00 4.20
77 78 2.046411 TACGGTAGGGTGCGTCGA 60.046 61.111 0.00 0.00 0.00 4.20
78 79 1.442526 ATCTACGGTAGGGTGCGTCG 61.443 60.000 14.82 0.00 0.00 5.12
79 80 0.310232 GATCTACGGTAGGGTGCGTC 59.690 60.000 14.82 1.82 0.00 5.19
80 81 1.105759 GGATCTACGGTAGGGTGCGT 61.106 60.000 14.82 0.00 0.00 5.24
81 82 1.658673 GGATCTACGGTAGGGTGCG 59.341 63.158 14.82 0.00 0.00 5.34
82 83 0.757935 TGGGATCTACGGTAGGGTGC 60.758 60.000 14.82 9.28 0.00 5.01
83 84 1.411612 GTTGGGATCTACGGTAGGGTG 59.588 57.143 14.82 0.00 0.00 4.61
84 85 1.007479 TGTTGGGATCTACGGTAGGGT 59.993 52.381 14.82 4.71 0.00 4.34
85 86 1.411612 GTGTTGGGATCTACGGTAGGG 59.588 57.143 14.82 0.00 0.00 3.53
86 87 1.066605 CGTGTTGGGATCTACGGTAGG 59.933 57.143 14.82 0.00 33.27 3.18
87 88 1.747355 ACGTGTTGGGATCTACGGTAG 59.253 52.381 8.91 8.91 40.56 3.18
88 89 1.838112 ACGTGTTGGGATCTACGGTA 58.162 50.000 0.00 0.00 40.56 4.02
89 90 0.971386 AACGTGTTGGGATCTACGGT 59.029 50.000 0.00 0.00 40.56 4.83
90 91 1.337447 ACAACGTGTTGGGATCTACGG 60.337 52.381 16.39 0.00 44.45 4.02
91 92 1.990563 GACAACGTGTTGGGATCTACG 59.009 52.381 16.39 0.00 44.45 3.51
92 93 2.993899 CTGACAACGTGTTGGGATCTAC 59.006 50.000 16.39 1.26 44.45 2.59
93 94 2.894765 TCTGACAACGTGTTGGGATCTA 59.105 45.455 16.39 0.00 44.45 1.98
94 95 1.691976 TCTGACAACGTGTTGGGATCT 59.308 47.619 16.39 0.00 44.45 2.75
95 96 2.163818 TCTGACAACGTGTTGGGATC 57.836 50.000 16.39 6.33 44.45 3.36
96 97 2.038426 TCATCTGACAACGTGTTGGGAT 59.962 45.455 16.39 12.78 44.45 3.85
97 98 1.414550 TCATCTGACAACGTGTTGGGA 59.585 47.619 16.39 11.32 44.45 4.37
98 99 1.877637 TCATCTGACAACGTGTTGGG 58.122 50.000 16.39 6.91 44.45 4.12
99 100 3.064682 TGTTTCATCTGACAACGTGTTGG 59.935 43.478 16.39 0.09 44.45 3.77
100 101 4.028383 GTGTTTCATCTGACAACGTGTTG 58.972 43.478 11.02 11.02 45.58 3.33
101 102 3.938963 AGTGTTTCATCTGACAACGTGTT 59.061 39.130 0.00 0.00 0.00 3.32
102 103 3.309682 CAGTGTTTCATCTGACAACGTGT 59.690 43.478 0.00 0.00 34.02 4.49
103 104 3.303329 CCAGTGTTTCATCTGACAACGTG 60.303 47.826 0.00 0.00 34.02 4.49
104 105 2.872245 CCAGTGTTTCATCTGACAACGT 59.128 45.455 0.00 0.00 34.02 3.99
133 134 1.141053 GCCTCCAGGTTATCCGACATT 59.859 52.381 0.00 0.00 39.05 2.71
205 206 3.865745 GTGTAATGACCATCCTCGTGAAG 59.134 47.826 0.00 0.00 0.00 3.02
280 281 1.287815 CGCCGTCTGTTGTGGACTA 59.712 57.895 0.00 0.00 0.00 2.59
309 311 1.394917 CCAACTCTGCGATGTAGTTGC 59.605 52.381 8.55 0.00 45.57 4.17
384 512 2.231529 GAGGTAGCCAGCTCTTCGATA 58.768 52.381 3.97 0.00 44.35 2.92
386 514 1.038130 GGAGGTAGCCAGCTCTTCGA 61.038 60.000 11.11 0.00 46.47 3.71
406 534 4.431524 TGCCACTAGGGGGAGGGG 62.432 72.222 14.41 0.00 43.63 4.79
407 535 3.090532 GTGCCACTAGGGGGAGGG 61.091 72.222 14.41 0.00 37.04 4.30
416 544 1.262417 TGATCTTCGTGGTGCCACTA 58.738 50.000 17.96 5.68 44.16 2.74
447 575 4.351054 CCTCGCCTGGTTTGCCCT 62.351 66.667 0.00 0.00 0.00 5.19
452 585 2.960688 GCTCCTCCTCGCCTGGTTT 61.961 63.158 0.00 0.00 0.00 3.27
481 614 1.566018 CCTTCCTGGTCGCGACAAAC 61.566 60.000 37.26 22.30 0.00 2.93
504 637 3.584406 CCATAGCTGATGATCCCAGGTAA 59.416 47.826 20.56 10.06 44.50 2.85
527 660 6.090483 ACGGATCAGTGATTCCATAGTAAG 57.910 41.667 7.16 0.00 0.00 2.34
557 690 1.135315 CGGCAAGCAAATGTCTCCG 59.865 57.895 0.00 0.00 0.00 4.63
587 720 4.267536 CTCTGGAAGATCATCAGCCAAAA 58.732 43.478 0.00 0.00 45.62 2.44
604 737 3.805108 GCCACATATACCTTCTGCTCTGG 60.805 52.174 0.00 0.00 0.00 3.86
645 778 5.657474 GTCCCTCTGTTTATATCGTTCACA 58.343 41.667 0.00 0.00 0.00 3.58
654 787 2.674420 CCTCCCGTCCCTCTGTTTATA 58.326 52.381 0.00 0.00 0.00 0.98
680 813 4.552166 ATTTCATGTACTAATGCCGCAC 57.448 40.909 0.00 0.00 0.00 5.34
734 867 7.923344 TGAAATTCCTATGCTCGAAAACAAAAA 59.077 29.630 0.00 0.00 0.00 1.94
766 906 6.671190 CAAACTTGACAAGATTGTGAGCATA 58.329 36.000 23.15 0.00 42.43 3.14
768 908 4.734402 GCAAACTTGACAAGATTGTGAGCA 60.734 41.667 28.41 0.00 41.64 4.26
812 952 4.882842 GGGTTACCCAATCAAACATGTT 57.117 40.909 16.81 4.92 44.65 2.71
859 1003 7.981225 GCCTGCTTTATTCATTCAAAGGAATTA 59.019 33.333 7.81 0.00 41.78 1.40
902 1047 9.295214 CTTTTTCTTTTTGAGAGAGAGGTTTTC 57.705 33.333 0.00 0.00 35.37 2.29
907 1052 7.800155 AGTCTTTTTCTTTTTGAGAGAGAGG 57.200 36.000 0.00 0.00 35.37 3.69
908 1053 8.672815 ACAAGTCTTTTTCTTTTTGAGAGAGAG 58.327 33.333 0.00 0.00 35.37 3.20
909 1054 8.567285 ACAAGTCTTTTTCTTTTTGAGAGAGA 57.433 30.769 0.00 0.00 35.37 3.10
913 1058 9.840427 CAGTTACAAGTCTTTTTCTTTTTGAGA 57.160 29.630 0.00 0.00 0.00 3.27
914 1059 9.626045 ACAGTTACAAGTCTTTTTCTTTTTGAG 57.374 29.630 0.00 0.00 0.00 3.02
918 1063 9.836076 GTGTACAGTTACAAGTCTTTTTCTTTT 57.164 29.630 0.00 0.00 40.00 2.27
919 1064 9.227777 AGTGTACAGTTACAAGTCTTTTTCTTT 57.772 29.630 0.00 0.00 40.00 2.52
920 1065 8.665685 CAGTGTACAGTTACAAGTCTTTTTCTT 58.334 33.333 0.00 0.00 40.00 2.52
921 1066 7.201617 GCAGTGTACAGTTACAAGTCTTTTTCT 60.202 37.037 0.00 0.00 40.00 2.52
922 1067 6.905609 GCAGTGTACAGTTACAAGTCTTTTTC 59.094 38.462 0.00 0.00 40.00 2.29
923 1068 6.598064 AGCAGTGTACAGTTACAAGTCTTTTT 59.402 34.615 0.00 0.00 40.00 1.94
928 1073 5.770417 AGTAGCAGTGTACAGTTACAAGTC 58.230 41.667 12.81 0.00 40.00 3.01
929 1074 5.786264 AGTAGCAGTGTACAGTTACAAGT 57.214 39.130 12.81 0.00 40.00 3.16
1080 1225 2.730524 GCAGGAGGAGGAGGACAGC 61.731 68.421 0.00 0.00 0.00 4.40
1083 1228 2.363172 GGTGCAGGAGGAGGAGGAC 61.363 68.421 0.00 0.00 0.00 3.85
1148 1296 4.760047 CCTCAACGTCTGCGGGGG 62.760 72.222 0.00 0.00 43.45 5.40
1176 1324 2.035155 TCCTCCTCGGCTTCGACA 59.965 61.111 0.00 0.00 38.07 4.35
1447 1597 1.006832 GTACCACTGCGTTGCATAGG 58.993 55.000 7.76 7.76 38.13 2.57
1478 1628 2.818130 TCACCATTTCCAAGCAAAGC 57.182 45.000 0.00 0.00 0.00 3.51
1482 1632 4.283978 ACATTTCATCACCATTTCCAAGCA 59.716 37.500 0.00 0.00 0.00 3.91
1483 1633 4.824289 ACATTTCATCACCATTTCCAAGC 58.176 39.130 0.00 0.00 0.00 4.01
1509 1659 8.902540 AGTACAACTACAGAAATCAAACATCA 57.097 30.769 0.00 0.00 0.00 3.07
1531 1681 9.209048 TCAGAATAATTGGCTACCTAAAGAGTA 57.791 33.333 0.00 0.00 0.00 2.59
1533 1683 8.997323 CATCAGAATAATTGGCTACCTAAAGAG 58.003 37.037 0.00 0.00 0.00 2.85
1551 1701 7.580910 ACCACATCCTTTCTATTCATCAGAAT 58.419 34.615 0.00 0.00 45.98 2.40
1618 1775 3.945285 GACTTGGAATTCGGAAATAGGCA 59.055 43.478 0.00 0.00 0.00 4.75
1629 1786 5.633601 GGAAAATTTGGTCGACTTGGAATTC 59.366 40.000 16.46 12.91 0.00 2.17
1648 1805 2.896685 AGGCGACATGGAATTTGGAAAA 59.103 40.909 0.00 0.00 0.00 2.29
1683 1840 5.045505 TGAATGTGCACCTACCCTATTAACA 60.046 40.000 15.69 0.00 0.00 2.41
1684 1841 5.433526 TGAATGTGCACCTACCCTATTAAC 58.566 41.667 15.69 0.00 0.00 2.01
1685 1842 5.427157 TCTGAATGTGCACCTACCCTATTAA 59.573 40.000 15.69 0.00 0.00 1.40
1973 2350 5.344066 AGATAAAGTGCTCGTCATGTAGTG 58.656 41.667 0.00 0.00 0.00 2.74
2012 2393 0.667487 ACAGATATCCATTCGGCGCG 60.667 55.000 0.00 0.00 0.00 6.86
2014 2395 3.032017 AGAACAGATATCCATTCGGCG 57.968 47.619 0.00 0.00 0.00 6.46
2050 2431 2.492088 GAGGGACCATGTTAAAACTGCC 59.508 50.000 0.00 0.00 0.00 4.85
2194 2575 4.588528 TGAGCTTTAGCCAGGTGAAAATTT 59.411 37.500 0.00 0.00 43.38 1.82
2197 2578 3.222173 TGAGCTTTAGCCAGGTGAAAA 57.778 42.857 0.00 0.00 43.38 2.29
2222 2603 6.438741 AGAGAGAAGTGACTGTTTGGATATGA 59.561 38.462 0.00 0.00 0.00 2.15
2333 2718 6.036083 GCCCTTTCTTCTTGTTTTTCTTGAAC 59.964 38.462 0.00 0.00 0.00 3.18
2457 2845 6.559521 CGCCAAAAACTTTTGTAATCAAGTCG 60.560 38.462 12.61 2.72 44.52 4.18
2736 3124 4.783227 AGGTTGTATGTGAATAGGTCTGGT 59.217 41.667 0.00 0.00 0.00 4.00
2790 3178 0.677288 TTCCTTTGAACGCCTCGAGA 59.323 50.000 15.71 0.00 0.00 4.04
2793 3181 2.076863 AGAATTCCTTTGAACGCCTCG 58.923 47.619 0.65 0.00 32.13 4.63
2798 3186 4.864806 TCTCATCGAGAATTCCTTTGAACG 59.135 41.667 0.65 0.00 35.59 3.95
2799 3187 6.314896 ACATCTCATCGAGAATTCCTTTGAAC 59.685 38.462 0.65 0.00 42.27 3.18
2804 3192 5.604758 TGACATCTCATCGAGAATTCCTT 57.395 39.130 0.65 0.00 42.27 3.36
2835 3223 2.105821 TGTCCATCCTTCGTTGGAGTTT 59.894 45.455 5.52 0.00 42.55 2.66
2865 3253 3.121058 CGACGTAGATACTAGCGAGGTTC 60.121 52.174 0.00 0.00 0.00 3.62
2915 3303 1.226746 CTCGGTTTCCACCAGTGAAC 58.773 55.000 0.00 0.00 44.53 3.18
2919 3307 2.430367 GCCTCGGTTTCCACCAGT 59.570 61.111 0.00 0.00 44.53 4.00
2929 3317 1.327690 TGGCTAATCTTCGCCTCGGT 61.328 55.000 6.97 0.00 46.42 4.69
3030 3418 0.249657 GGGAGGTCATCTGCATCGAC 60.250 60.000 0.00 0.00 35.32 4.20
3046 3434 1.403814 CGGCTAGTCATTCTCTGGGA 58.596 55.000 0.00 0.00 0.00 4.37
3054 3442 3.961408 AGACATAGTTCCGGCTAGTCATT 59.039 43.478 0.00 0.00 0.00 2.57
3219 3607 0.248743 TAAAGCTATCCGCCGTGTCG 60.249 55.000 0.00 0.00 40.39 4.35
3284 3672 4.363990 CCACTCAGGAGCACGCGT 62.364 66.667 5.58 5.58 41.22 6.01
3368 3764 7.441017 TGCCAAAATAAAGCATAAACTGTTCT 58.559 30.769 0.00 0.00 0.00 3.01
3397 3793 7.615403 TGGACCTGATAATATAGTCAGATTGC 58.385 38.462 15.34 9.51 43.50 3.56
3413 3809 2.244117 AATGCGTCGCTGGACCTGAT 62.244 55.000 19.50 0.00 40.17 2.90
3435 3831 9.190317 ACTGGACCTGAAAATATATTTCTTTCC 57.810 33.333 11.08 12.16 0.00 3.13
3461 3857 4.760530 ATCCTGCATGCTCTTAGTTACA 57.239 40.909 20.33 0.00 0.00 2.41
3479 3875 2.300433 TGCATACATGTGGCAGAATCC 58.700 47.619 19.32 0.00 32.95 3.01
3495 3891 2.114670 GTGGCATACACCGCTGCAT 61.115 57.895 0.00 0.00 44.49 3.96
3510 3907 1.466360 GCTGCTGCTACAAAATCGTGG 60.466 52.381 8.53 0.00 36.03 4.94
3511 3908 1.887320 GCTGCTGCTACAAAATCGTG 58.113 50.000 8.53 0.00 36.03 4.35
3523 3920 1.078567 AGAACTGCCTAGCTGCTGC 60.079 57.895 13.43 7.62 40.05 5.25
3560 3963 2.764944 CAGAACTGCCTAGCTGCTG 58.235 57.895 13.43 0.00 36.39 4.41
3598 4001 3.755628 GGAGTGCTACGGCCACGA 61.756 66.667 2.24 0.00 44.60 4.35
3600 4003 4.468689 GGGGAGTGCTACGGCCAC 62.469 72.222 2.24 0.00 37.74 5.01
3603 4006 3.142838 TACGGGGAGTGCTACGGC 61.143 66.667 4.63 0.00 39.26 5.68
3604 4007 1.751927 AGTACGGGGAGTGCTACGG 60.752 63.158 4.63 0.00 44.08 4.02
3605 4008 1.432251 CAGTACGGGGAGTGCTACG 59.568 63.158 0.00 0.00 44.09 3.51
3606 4009 1.141234 GCAGTACGGGGAGTGCTAC 59.859 63.158 3.42 0.00 44.09 3.58
3607 4010 1.304630 TGCAGTACGGGGAGTGCTA 60.305 57.895 11.74 0.00 44.09 3.49
3608 4011 2.603473 TGCAGTACGGGGAGTGCT 60.603 61.111 11.74 0.00 46.92 4.40
3609 4012 1.601419 TACTGCAGTACGGGGAGTGC 61.601 60.000 22.67 3.70 44.60 4.40
3610 4013 1.112113 ATACTGCAGTACGGGGAGTG 58.888 55.000 28.28 0.00 37.51 3.51
3611 4014 1.112113 CATACTGCAGTACGGGGAGT 58.888 55.000 28.28 16.31 40.25 3.85
3612 4015 0.389391 CCATACTGCAGTACGGGGAG 59.611 60.000 27.60 13.94 30.75 4.30
3613 4016 0.324923 ACCATACTGCAGTACGGGGA 60.325 55.000 35.07 14.90 38.12 4.81
3614 4017 0.539986 AACCATACTGCAGTACGGGG 59.460 55.000 35.07 30.74 38.12 5.73
3615 4018 2.166870 TGTAACCATACTGCAGTACGGG 59.833 50.000 35.07 32.75 38.12 5.28
3616 4019 3.513680 TGTAACCATACTGCAGTACGG 57.486 47.619 31.95 31.95 39.56 4.02
3617 4020 4.206404 CGAATGTAACCATACTGCAGTACG 59.794 45.833 28.28 20.67 32.72 3.67
3618 4021 4.506654 CCGAATGTAACCATACTGCAGTAC 59.493 45.833 28.28 17.51 32.72 2.73
3619 4022 4.442332 CCCGAATGTAACCATACTGCAGTA 60.442 45.833 27.91 27.91 32.98 2.74
3620 4023 3.531538 CCGAATGTAACCATACTGCAGT 58.468 45.455 25.12 25.12 32.98 4.40
3621 4024 2.872245 CCCGAATGTAACCATACTGCAG 59.128 50.000 13.48 13.48 32.98 4.41
3622 4025 2.502130 TCCCGAATGTAACCATACTGCA 59.498 45.455 0.00 0.00 32.98 4.41
3623 4026 3.188159 TCCCGAATGTAACCATACTGC 57.812 47.619 0.00 0.00 32.98 4.40
3624 4027 6.755206 TCTAATCCCGAATGTAACCATACTG 58.245 40.000 0.00 0.00 32.98 2.74
3625 4028 6.989155 TCTAATCCCGAATGTAACCATACT 57.011 37.500 0.00 0.00 32.98 2.12
3626 4029 8.617290 AAATCTAATCCCGAATGTAACCATAC 57.383 34.615 0.00 0.00 0.00 2.39
3627 4030 9.062524 CAAAATCTAATCCCGAATGTAACCATA 57.937 33.333 0.00 0.00 0.00 2.74
3628 4031 7.559897 ACAAAATCTAATCCCGAATGTAACCAT 59.440 33.333 0.00 0.00 0.00 3.55
3629 4032 6.887545 ACAAAATCTAATCCCGAATGTAACCA 59.112 34.615 0.00 0.00 0.00 3.67
3630 4033 7.329588 ACAAAATCTAATCCCGAATGTAACC 57.670 36.000 0.00 0.00 0.00 2.85
3639 4042 9.730420 CCAAGTTTATAACAAAATCTAATCCCG 57.270 33.333 0.00 0.00 0.00 5.14
3640 4043 9.529325 GCCAAGTTTATAACAAAATCTAATCCC 57.471 33.333 0.00 0.00 0.00 3.85
3645 4048 9.868277 CCAATGCCAAGTTTATAACAAAATCTA 57.132 29.630 0.00 0.00 0.00 1.98
3646 4049 7.334171 GCCAATGCCAAGTTTATAACAAAATCT 59.666 33.333 0.00 0.00 0.00 2.40
3647 4050 7.334171 AGCCAATGCCAAGTTTATAACAAAATC 59.666 33.333 0.00 0.00 38.69 2.17
3648 4051 7.167535 AGCCAATGCCAAGTTTATAACAAAAT 58.832 30.769 0.00 0.00 38.69 1.82
3649 4052 6.529220 AGCCAATGCCAAGTTTATAACAAAA 58.471 32.000 0.00 0.00 38.69 2.44
3650 4053 6.107901 AGCCAATGCCAAGTTTATAACAAA 57.892 33.333 0.00 0.00 38.69 2.83
3651 4054 5.736951 AGCCAATGCCAAGTTTATAACAA 57.263 34.783 0.00 0.00 38.69 2.83
3652 4055 6.661377 TCTTAGCCAATGCCAAGTTTATAACA 59.339 34.615 0.00 0.00 37.47 2.41
3653 4056 7.095695 TCTTAGCCAATGCCAAGTTTATAAC 57.904 36.000 0.00 0.00 37.47 1.89
3654 4057 7.630513 GCTTCTTAGCCAATGCCAAGTTTATAA 60.631 37.037 0.00 0.00 41.74 0.98
3655 4058 6.183360 GCTTCTTAGCCAATGCCAAGTTTATA 60.183 38.462 0.00 0.00 41.74 0.98
3656 4059 5.394553 GCTTCTTAGCCAATGCCAAGTTTAT 60.395 40.000 0.00 0.00 41.74 1.40
3657 4060 4.082245 GCTTCTTAGCCAATGCCAAGTTTA 60.082 41.667 0.00 0.00 41.74 2.01
3658 4061 3.306294 GCTTCTTAGCCAATGCCAAGTTT 60.306 43.478 0.00 0.00 41.74 2.66
3659 4062 2.232208 GCTTCTTAGCCAATGCCAAGTT 59.768 45.455 0.00 0.00 41.74 2.66
3660 4063 1.821136 GCTTCTTAGCCAATGCCAAGT 59.179 47.619 0.00 0.00 41.74 3.16
3661 4064 2.573941 GCTTCTTAGCCAATGCCAAG 57.426 50.000 0.00 0.00 41.74 3.61
3672 4075 4.098044 TCATTACTCACGGAGGCTTCTTAG 59.902 45.833 0.00 0.00 33.35 2.18
3673 4076 4.021229 TCATTACTCACGGAGGCTTCTTA 58.979 43.478 0.00 0.00 33.35 2.10
3674 4077 2.832129 TCATTACTCACGGAGGCTTCTT 59.168 45.455 0.00 0.00 33.35 2.52
3675 4078 2.428890 CTCATTACTCACGGAGGCTTCT 59.571 50.000 0.00 0.00 33.35 2.85
3676 4079 2.427453 TCTCATTACTCACGGAGGCTTC 59.573 50.000 5.98 0.00 33.35 3.86
3677 4080 2.457598 TCTCATTACTCACGGAGGCTT 58.542 47.619 5.98 0.00 33.35 4.35
3678 4081 2.145397 TCTCATTACTCACGGAGGCT 57.855 50.000 5.98 0.00 33.35 4.58
3679 4082 2.961526 TTCTCATTACTCACGGAGGC 57.038 50.000 5.98 0.00 33.35 4.70
3680 4083 4.261825 GGAGATTCTCATTACTCACGGAGG 60.262 50.000 15.36 0.00 30.70 4.30
3681 4084 4.582656 AGGAGATTCTCATTACTCACGGAG 59.417 45.833 15.36 0.03 31.93 4.63
3682 4085 4.537751 AGGAGATTCTCATTACTCACGGA 58.462 43.478 15.36 0.00 31.08 4.69
3683 4086 4.927978 AGGAGATTCTCATTACTCACGG 57.072 45.455 15.36 0.00 31.08 4.94
3684 4087 6.813649 TGAAAAGGAGATTCTCATTACTCACG 59.186 38.462 13.48 0.00 33.23 4.35
3685 4088 7.065204 GGTGAAAAGGAGATTCTCATTACTCAC 59.935 40.741 27.68 27.68 41.31 3.51
3686 4089 7.106239 GGTGAAAAGGAGATTCTCATTACTCA 58.894 38.462 13.48 15.00 33.23 3.41
3687 4090 6.540551 GGGTGAAAAGGAGATTCTCATTACTC 59.459 42.308 13.48 12.98 33.23 2.59
3688 4091 6.418946 GGGTGAAAAGGAGATTCTCATTACT 58.581 40.000 13.48 4.91 33.23 2.24
3689 4092 5.294552 CGGGTGAAAAGGAGATTCTCATTAC 59.705 44.000 13.48 8.55 33.23 1.89
3690 4093 5.428253 CGGGTGAAAAGGAGATTCTCATTA 58.572 41.667 13.48 0.00 33.23 1.90
3691 4094 4.265073 CGGGTGAAAAGGAGATTCTCATT 58.735 43.478 15.36 11.64 35.99 2.57
3692 4095 3.878778 CGGGTGAAAAGGAGATTCTCAT 58.121 45.455 15.36 5.46 31.08 2.90
3693 4096 2.615493 GCGGGTGAAAAGGAGATTCTCA 60.615 50.000 15.36 0.00 31.08 3.27
3694 4097 2.010497 GCGGGTGAAAAGGAGATTCTC 58.990 52.381 5.03 5.03 0.00 2.87
3695 4098 1.351017 TGCGGGTGAAAAGGAGATTCT 59.649 47.619 0.00 0.00 0.00 2.40
3696 4099 1.821216 TGCGGGTGAAAAGGAGATTC 58.179 50.000 0.00 0.00 0.00 2.52
3697 4100 2.286365 TTGCGGGTGAAAAGGAGATT 57.714 45.000 0.00 0.00 0.00 2.40
3698 4101 2.286365 TTTGCGGGTGAAAAGGAGAT 57.714 45.000 0.00 0.00 0.00 2.75
3699 4102 2.060050 TTTTGCGGGTGAAAAGGAGA 57.940 45.000 0.00 0.00 0.00 3.71
3700 4103 2.880963 TTTTTGCGGGTGAAAAGGAG 57.119 45.000 0.00 0.00 0.00 3.69
3719 4122 1.295792 TGTTCGACGCAGCTCTTTTT 58.704 45.000 0.00 0.00 0.00 1.94
3720 4123 1.512926 ATGTTCGACGCAGCTCTTTT 58.487 45.000 0.00 0.00 0.00 2.27
3721 4124 1.512926 AATGTTCGACGCAGCTCTTT 58.487 45.000 0.00 0.00 0.00 2.52
3722 4125 1.512926 AAATGTTCGACGCAGCTCTT 58.487 45.000 0.00 0.00 0.00 2.85
3723 4126 1.461127 GAAAATGTTCGACGCAGCTCT 59.539 47.619 0.00 0.00 0.00 4.09
3724 4127 1.461127 AGAAAATGTTCGACGCAGCTC 59.539 47.619 0.00 0.00 38.90 4.09
3725 4128 1.461127 GAGAAAATGTTCGACGCAGCT 59.539 47.619 0.00 0.00 38.90 4.24
3726 4129 1.783416 CGAGAAAATGTTCGACGCAGC 60.783 52.381 5.61 0.00 39.06 5.25
3727 4130 1.455786 ACGAGAAAATGTTCGACGCAG 59.544 47.619 14.75 0.00 39.86 5.18
3728 4131 1.191425 CACGAGAAAATGTTCGACGCA 59.809 47.619 14.75 0.00 39.86 5.24
3729 4132 1.454276 TCACGAGAAAATGTTCGACGC 59.546 47.619 14.75 0.00 39.86 5.19
3730 4133 2.468549 CGTCACGAGAAAATGTTCGACG 60.469 50.000 13.72 13.72 41.01 5.12
3731 4134 2.470257 ACGTCACGAGAAAATGTTCGAC 59.530 45.455 2.91 0.00 39.93 4.20
3732 4135 2.469886 CACGTCACGAGAAAATGTTCGA 59.530 45.455 2.91 0.00 39.93 3.71
3766 4169 2.605818 TGAACTTCGTCACACCTTTTCG 59.394 45.455 0.00 0.00 0.00 3.46
3768 4171 2.354821 GCTGAACTTCGTCACACCTTTT 59.645 45.455 0.00 0.00 0.00 2.27
3796 4199 3.268334 AGTTGGTATCTGGGGCATGTTTA 59.732 43.478 0.00 0.00 0.00 2.01
3797 4200 2.042979 AGTTGGTATCTGGGGCATGTTT 59.957 45.455 0.00 0.00 0.00 2.83
3801 4204 1.774856 GGTAGTTGGTATCTGGGGCAT 59.225 52.381 0.00 0.00 0.00 4.40
3806 4209 2.478292 ACCTGGGTAGTTGGTATCTGG 58.522 52.381 0.00 0.00 31.50 3.86
3810 4213 4.070681 ACAGTACCTGGGTAGTTGGTAT 57.929 45.455 4.52 0.00 38.42 2.73
3812 4215 2.410790 ACAGTACCTGGGTAGTTGGT 57.589 50.000 4.52 0.00 35.51 3.67
3825 4228 3.498927 TCAGCTTTAGCCGTACAGTAC 57.501 47.619 0.00 0.00 43.38 2.73
3826 4229 3.508793 ACTTCAGCTTTAGCCGTACAGTA 59.491 43.478 0.00 0.00 43.38 2.74
3827 4230 2.299297 ACTTCAGCTTTAGCCGTACAGT 59.701 45.455 0.00 0.00 43.38 3.55
3828 4231 2.960819 ACTTCAGCTTTAGCCGTACAG 58.039 47.619 0.00 0.00 43.38 2.74
3829 4232 3.064207 CAACTTCAGCTTTAGCCGTACA 58.936 45.455 0.00 0.00 43.38 2.90
3925 4334 2.124570 ATGTCATGTCGCCTGCCC 60.125 61.111 0.00 0.00 0.00 5.36
3928 4337 2.387309 GGTGATGTCATGTCGCCTG 58.613 57.895 7.05 0.00 41.83 4.85
3929 4338 4.941609 GGTGATGTCATGTCGCCT 57.058 55.556 7.05 0.00 41.83 5.52
3930 4339 1.709147 GCAGGTGATGTCATGTCGCC 61.709 60.000 6.33 6.33 44.67 5.54
3931 4340 0.742281 AGCAGGTGATGTCATGTCGC 60.742 55.000 0.00 0.00 0.00 5.19
3932 4341 1.284657 GAGCAGGTGATGTCATGTCG 58.715 55.000 0.00 0.00 0.00 4.35
3934 4343 0.897621 TCGAGCAGGTGATGTCATGT 59.102 50.000 0.00 0.00 0.00 3.21
3935 4344 2.133553 GATCGAGCAGGTGATGTCATG 58.866 52.381 0.00 0.00 0.00 3.07
3936 4345 1.758862 TGATCGAGCAGGTGATGTCAT 59.241 47.619 0.00 0.00 0.00 3.06
3937 4346 1.134995 GTGATCGAGCAGGTGATGTCA 60.135 52.381 2.20 0.00 0.00 3.58
3949 4358 2.614779 ACATGCTCAAGTGTGATCGAG 58.385 47.619 0.00 0.00 31.85 4.04
3977 4386 1.577328 GACCAACGGTGTGGAGCATG 61.577 60.000 13.78 0.00 41.65 4.06
3995 4404 3.048600 CACCAGATATTTCCCTCCTGGA 58.951 50.000 13.00 0.00 45.35 3.86
3997 4406 2.173356 TGCACCAGATATTTCCCTCCTG 59.827 50.000 0.00 0.00 0.00 3.86
3998 4407 2.173569 GTGCACCAGATATTTCCCTCCT 59.826 50.000 5.22 0.00 0.00 3.69
3999 4408 2.576615 GTGCACCAGATATTTCCCTCC 58.423 52.381 5.22 0.00 0.00 4.30
4000 4409 2.576615 GGTGCACCAGATATTTCCCTC 58.423 52.381 31.23 0.00 35.64 4.30
4001 4410 1.134098 CGGTGCACCAGATATTTCCCT 60.134 52.381 34.16 0.00 35.14 4.20
4002 4411 1.308998 CGGTGCACCAGATATTTCCC 58.691 55.000 34.16 3.99 35.14 3.97
4003 4412 1.134220 TCCGGTGCACCAGATATTTCC 60.134 52.381 34.16 4.55 35.14 3.13
4004 4413 2.213499 CTCCGGTGCACCAGATATTTC 58.787 52.381 34.16 5.28 35.14 2.17
4005 4414 1.747206 GCTCCGGTGCACCAGATATTT 60.747 52.381 34.16 0.00 35.14 1.40
4006 4415 0.179045 GCTCCGGTGCACCAGATATT 60.179 55.000 34.16 0.00 35.14 1.28
4007 4416 1.050988 AGCTCCGGTGCACCAGATAT 61.051 55.000 34.16 17.14 35.14 1.63
4008 4417 1.264749 AAGCTCCGGTGCACCAGATA 61.265 55.000 34.16 15.43 35.14 1.98
4009 4418 2.596851 AAGCTCCGGTGCACCAGAT 61.597 57.895 34.16 21.47 35.14 2.90
4010 4419 3.241530 AAGCTCCGGTGCACCAGA 61.242 61.111 34.16 27.41 35.14 3.86
4011 4420 3.052082 CAAGCTCCGGTGCACCAG 61.052 66.667 34.16 25.24 35.14 4.00
4012 4421 3.872603 ACAAGCTCCGGTGCACCA 61.873 61.111 34.16 16.11 35.14 4.17
4013 4422 3.357079 CACAAGCTCCGGTGCACC 61.357 66.667 28.68 26.78 34.99 5.01
4014 4423 3.357079 CCACAAGCTCCGGTGCAC 61.357 66.667 28.68 8.80 33.72 4.57
4015 4424 3.872603 ACCACAAGCTCCGGTGCA 61.873 61.111 28.68 0.00 33.72 4.57
4016 4425 3.357079 CACCACAAGCTCCGGTGC 61.357 66.667 20.71 20.71 43.43 5.01
4018 4427 2.214216 TAGCACCACAAGCTCCGGT 61.214 57.895 0.00 0.00 42.32 5.28
4019 4428 1.741770 GTAGCACCACAAGCTCCGG 60.742 63.158 0.00 0.00 42.32 5.14
4020 4429 1.741770 GGTAGCACCACAAGCTCCG 60.742 63.158 0.00 0.00 42.32 4.63
4021 4430 1.741770 CGGTAGCACCACAAGCTCC 60.742 63.158 6.21 0.00 42.32 4.70
4022 4431 1.741770 CCGGTAGCACCACAAGCTC 60.742 63.158 0.00 0.00 42.32 4.09
4023 4432 2.347490 CCGGTAGCACCACAAGCT 59.653 61.111 0.00 0.00 45.77 3.74
4024 4433 2.032071 ACCGGTAGCACCACAAGC 59.968 61.111 4.49 0.00 38.47 4.01
4025 4434 0.319083 TACACCGGTAGCACCACAAG 59.681 55.000 6.87 0.00 38.47 3.16
4026 4435 0.033781 GTACACCGGTAGCACCACAA 59.966 55.000 6.87 0.00 38.47 3.33
4027 4436 1.667151 GTACACCGGTAGCACCACA 59.333 57.895 6.87 0.00 38.47 4.17
4028 4437 1.079612 GGTACACCGGTAGCACCAC 60.080 63.158 20.88 8.21 45.18 4.16
4029 4438 3.379880 GGTACACCGGTAGCACCA 58.620 61.111 20.88 0.00 45.18 4.17
4039 4448 3.454375 CACAATATGAGTCCGGTACACC 58.546 50.000 0.00 0.00 0.00 4.16
4040 4449 2.864343 GCACAATATGAGTCCGGTACAC 59.136 50.000 0.00 0.00 0.00 2.90
4041 4450 2.764010 AGCACAATATGAGTCCGGTACA 59.236 45.455 0.00 0.40 0.00 2.90
4042 4451 3.454371 AGCACAATATGAGTCCGGTAC 57.546 47.619 0.00 0.00 0.00 3.34
4043 4452 4.481368 AAAGCACAATATGAGTCCGGTA 57.519 40.909 0.00 0.00 0.00 4.02
4044 4453 3.350219 AAAGCACAATATGAGTCCGGT 57.650 42.857 0.00 0.00 0.00 5.28
4045 4454 5.811399 TTAAAAGCACAATATGAGTCCGG 57.189 39.130 0.00 0.00 0.00 5.14
4046 4455 9.950680 ATATTTTAAAAGCACAATATGAGTCCG 57.049 29.630 6.79 0.00 0.00 4.79
4091 4500 1.815421 GCTACCGGTGCACAGGATG 60.815 63.158 37.84 28.18 46.00 3.51
4092 4501 1.626356 ATGCTACCGGTGCACAGGAT 61.626 55.000 37.84 24.57 43.59 3.24
4093 4502 2.238847 GATGCTACCGGTGCACAGGA 62.239 60.000 37.84 19.65 43.59 3.86
4094 4503 1.815421 GATGCTACCGGTGCACAGG 60.815 63.158 31.20 31.20 43.59 4.00
4095 4504 1.079197 TGATGCTACCGGTGCACAG 60.079 57.895 26.70 15.33 43.59 3.66
4096 4505 1.375396 GTGATGCTACCGGTGCACA 60.375 57.895 26.70 22.58 43.59 4.57
4097 4506 0.953471 TTGTGATGCTACCGGTGCAC 60.953 55.000 26.70 20.55 43.59 4.57
4098 4507 0.673333 CTTGTGATGCTACCGGTGCA 60.673 55.000 26.46 26.46 44.95 4.57
4099 4508 0.673644 ACTTGTGATGCTACCGGTGC 60.674 55.000 19.93 19.04 0.00 5.01
4100 4509 1.078709 CACTTGTGATGCTACCGGTG 58.921 55.000 19.93 8.61 0.00 4.94
4101 4510 0.673644 GCACTTGTGATGCTACCGGT 60.674 55.000 13.98 13.98 40.08 5.28
4102 4511 1.695893 CGCACTTGTGATGCTACCGG 61.696 60.000 0.00 0.00 41.10 5.28
4103 4512 1.695893 CCGCACTTGTGATGCTACCG 61.696 60.000 4.79 0.00 41.10 4.02
4104 4513 1.369091 CCCGCACTTGTGATGCTACC 61.369 60.000 4.79 0.00 41.10 3.18
4105 4514 0.673644 ACCCGCACTTGTGATGCTAC 60.674 55.000 4.79 0.00 41.10 3.58
4106 4515 0.673333 CACCCGCACTTGTGATGCTA 60.673 55.000 4.79 0.00 41.10 3.49
4107 4516 1.968017 CACCCGCACTTGTGATGCT 60.968 57.895 4.79 0.00 41.10 3.79
4108 4517 2.562912 CACCCGCACTTGTGATGC 59.437 61.111 4.79 0.00 39.81 3.91
4109 4518 2.260154 TGCACCCGCACTTGTGATG 61.260 57.895 4.79 0.00 45.36 3.07
4110 4519 2.112928 TGCACCCGCACTTGTGAT 59.887 55.556 4.79 0.00 45.36 3.06
4119 4528 0.748005 AATGTATCTGGTGCACCCGC 60.748 55.000 32.62 17.42 35.15 6.13
4120 4529 1.299541 GAATGTATCTGGTGCACCCG 58.700 55.000 32.62 26.50 35.15 5.28
4121 4530 1.212935 AGGAATGTATCTGGTGCACCC 59.787 52.381 32.62 17.27 34.29 4.61
4122 4531 2.717639 AGGAATGTATCTGGTGCACC 57.282 50.000 29.67 29.67 0.00 5.01
4123 4532 5.186198 ACTAAAGGAATGTATCTGGTGCAC 58.814 41.667 8.80 8.80 0.00 4.57
4124 4533 5.428253 GACTAAAGGAATGTATCTGGTGCA 58.572 41.667 0.00 0.00 0.00 4.57
4125 4534 4.816925 GGACTAAAGGAATGTATCTGGTGC 59.183 45.833 0.00 0.00 0.00 5.01
4126 4535 5.989477 TGGACTAAAGGAATGTATCTGGTG 58.011 41.667 0.00 0.00 0.00 4.17
4127 4536 5.131142 CCTGGACTAAAGGAATGTATCTGGT 59.869 44.000 0.00 0.00 36.91 4.00
4128 4537 5.131142 ACCTGGACTAAAGGAATGTATCTGG 59.869 44.000 0.00 0.00 38.27 3.86
4129 4538 6.051717 CACCTGGACTAAAGGAATGTATCTG 58.948 44.000 0.00 0.00 38.27 2.90
4130 4539 5.726793 ACACCTGGACTAAAGGAATGTATCT 59.273 40.000 0.00 0.00 38.27 1.98
4131 4540 5.990668 ACACCTGGACTAAAGGAATGTATC 58.009 41.667 0.00 0.00 38.27 2.24
4132 4541 6.408206 GCTACACCTGGACTAAAGGAATGTAT 60.408 42.308 0.00 0.00 38.27 2.29
4133 4542 5.105064 GCTACACCTGGACTAAAGGAATGTA 60.105 44.000 0.00 0.00 38.27 2.29
4134 4543 4.323562 GCTACACCTGGACTAAAGGAATGT 60.324 45.833 0.00 0.00 38.27 2.71
4135 4544 4.192317 GCTACACCTGGACTAAAGGAATG 58.808 47.826 0.00 0.00 38.27 2.67
4136 4545 3.844211 TGCTACACCTGGACTAAAGGAAT 59.156 43.478 0.00 0.00 38.27 3.01
4137 4546 3.244582 TGCTACACCTGGACTAAAGGAA 58.755 45.455 0.00 0.00 38.27 3.36
4138 4547 2.897350 TGCTACACCTGGACTAAAGGA 58.103 47.619 0.00 0.00 38.27 3.36
4139 4548 3.535561 CATGCTACACCTGGACTAAAGG 58.464 50.000 0.00 0.00 40.93 3.11
4140 4549 2.939103 GCATGCTACACCTGGACTAAAG 59.061 50.000 11.37 0.00 0.00 1.85
4141 4550 2.304470 TGCATGCTACACCTGGACTAAA 59.696 45.455 20.33 0.00 0.00 1.85
4142 4551 1.905894 TGCATGCTACACCTGGACTAA 59.094 47.619 20.33 0.00 0.00 2.24
4143 4552 1.207089 GTGCATGCTACACCTGGACTA 59.793 52.381 20.33 0.00 31.67 2.59
4144 4553 0.036010 GTGCATGCTACACCTGGACT 60.036 55.000 20.33 0.00 31.67 3.85
4145 4554 2.471255 GTGCATGCTACACCTGGAC 58.529 57.895 20.33 0.83 31.67 4.02
4179 4588 3.700539 CTGGTTTTCATATGACATGGGCA 59.299 43.478 4.48 0.00 0.00 5.36
4180 4589 3.701040 ACTGGTTTTCATATGACATGGGC 59.299 43.478 4.48 0.00 0.00 5.36
4183 4592 4.591202 GCGACTGGTTTTCATATGACATG 58.409 43.478 4.48 0.00 0.00 3.21
4184 4593 3.309682 CGCGACTGGTTTTCATATGACAT 59.690 43.478 4.48 0.00 0.00 3.06
4185 4594 2.670905 CGCGACTGGTTTTCATATGACA 59.329 45.455 4.48 0.00 0.00 3.58
4186 4595 2.927477 TCGCGACTGGTTTTCATATGAC 59.073 45.455 3.71 0.00 0.00 3.06
4187 4596 3.239587 TCGCGACTGGTTTTCATATGA 57.760 42.857 3.71 0.00 0.00 2.15
4188 4597 3.804325 AGATCGCGACTGGTTTTCATATG 59.196 43.478 12.93 0.00 0.00 1.78
4189 4598 4.060038 AGATCGCGACTGGTTTTCATAT 57.940 40.909 12.93 0.00 0.00 1.78
4190 4599 3.520290 AGATCGCGACTGGTTTTCATA 57.480 42.857 12.93 0.00 0.00 2.15
4191 4600 2.386661 AGATCGCGACTGGTTTTCAT 57.613 45.000 12.93 0.00 0.00 2.57
4192 4601 2.490509 TCTAGATCGCGACTGGTTTTCA 59.509 45.455 12.93 0.00 0.00 2.69
4193 4602 2.853003 GTCTAGATCGCGACTGGTTTTC 59.147 50.000 12.93 2.57 0.00 2.29
4214 4623 3.794028 CGAGAAATCCTTAGACAAGCTCG 59.206 47.826 0.00 0.00 34.97 5.03
4223 4632 2.579207 TGACGCCGAGAAATCCTTAG 57.421 50.000 0.00 0.00 0.00 2.18
4235 4644 2.408835 GATTGCCCAATGACGCCG 59.591 61.111 0.00 0.00 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.