Multiple sequence alignment - TraesCS2A01G314300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G314300 chr2A 100.000 3084 0 0 564 3647 539016972 539013889 0.000000e+00 5696.0
1 TraesCS2A01G314300 chr2A 100.000 316 0 0 1 316 539017535 539017220 5.250000e-163 584.0
2 TraesCS2A01G314300 chr2A 79.091 330 48 13 2 314 668046093 668045768 1.330000e-49 207.0
3 TraesCS2A01G314300 chr2A 95.238 126 6 0 2838 2963 729162003 729162128 2.220000e-47 200.0
4 TraesCS2A01G314300 chr2B 97.034 2259 58 2 590 2839 476455043 476457301 0.000000e+00 3792.0
5 TraesCS2A01G314300 chr2B 97.704 697 10 4 2953 3647 476457299 476457991 0.000000e+00 1194.0
6 TraesCS2A01G314300 chr2D 96.368 2285 74 2 564 2839 402243995 402241711 0.000000e+00 3751.0
7 TraesCS2A01G314300 chr2D 96.280 699 22 3 2953 3647 402241713 402241015 0.000000e+00 1144.0
8 TraesCS2A01G314300 chr2D 80.000 330 51 8 2 316 190024842 190024513 2.830000e-56 230.0
9 TraesCS2A01G314300 chr4A 82.979 329 41 5 2 315 575005561 575005233 2.140000e-72 283.0
10 TraesCS2A01G314300 chr4A 81.515 330 46 8 2 316 432530768 432531097 1.300000e-64 257.0
11 TraesCS2A01G314300 chr5D 81.366 322 47 10 2 314 260681157 260680840 2.170000e-62 250.0
12 TraesCS2A01G314300 chr5D 79.365 315 60 3 5 314 457652717 457652403 2.210000e-52 217.0
13 TraesCS2A01G314300 chr5D 86.093 151 17 2 170 316 464564097 464564247 3.770000e-35 159.0
14 TraesCS2A01G314300 chr5B 80.665 331 44 13 2 315 418980468 418980795 4.710000e-59 239.0
15 TraesCS2A01G314300 chr1D 80.685 321 51 8 2 316 232139684 232139999 4.710000e-59 239.0
16 TraesCS2A01G314300 chr4D 97.521 121 3 0 2838 2958 55352558 55352438 1.330000e-49 207.0
17 TraesCS2A01G314300 chr1B 96.721 122 3 1 2834 2955 8855987 8855867 6.180000e-48 202.0
18 TraesCS2A01G314300 chr5A 95.238 126 6 0 2834 2959 706441857 706441982 2.220000e-47 200.0
19 TraesCS2A01G314300 chr3B 78.614 332 50 12 2 316 585834820 585835147 2.220000e-47 200.0
20 TraesCS2A01G314300 chr3B 95.200 125 6 0 2835 2959 160350442 160350318 7.990000e-47 198.0
21 TraesCS2A01G314300 chr3B 78.755 273 44 10 54 316 22647856 22647588 1.740000e-38 171.0
22 TraesCS2A01G314300 chr4B 92.029 138 11 0 2828 2965 183611217 183611080 1.030000e-45 195.0
23 TraesCS2A01G314300 chr4B 80.870 230 37 5 91 316 96437301 96437075 1.350000e-39 174.0
24 TraesCS2A01G314300 chr4B 79.646 226 39 6 16 237 495124849 495125071 4.880000e-34 156.0
25 TraesCS2A01G314300 chr1A 89.474 152 14 2 2836 2985 188148891 188148740 1.340000e-44 191.0
26 TraesCS2A01G314300 chr1A 78.481 237 38 9 2 228 499788036 499788269 3.800000e-30 143.0
27 TraesCS2A01G314300 chrUn 91.489 141 7 5 2837 2975 99244942 99244805 4.810000e-44 189.0
28 TraesCS2A01G314300 chrUn 75.969 129 16 12 587 704 16170797 16170673 7.000000e-03 52.8
29 TraesCS2A01G314300 chr7B 91.971 137 8 3 2833 2968 433515245 433515379 4.810000e-44 189.0
30 TraesCS2A01G314300 chr3D 82.979 141 14 7 569 701 452623623 452623485 6.400000e-23 119.0
31 TraesCS2A01G314300 chr3D 82.308 130 18 3 566 690 89921519 89921648 1.380000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G314300 chr2A 539013889 539017535 3646 True 3140.0 5696 100.000 1 3647 2 chr2A.!!$R2 3646
1 TraesCS2A01G314300 chr2B 476455043 476457991 2948 False 2493.0 3792 97.369 590 3647 2 chr2B.!!$F1 3057
2 TraesCS2A01G314300 chr2D 402241015 402243995 2980 True 2447.5 3751 96.324 564 3647 2 chr2D.!!$R2 3083

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.037605 ATTCGGTCGGCGTTTCTCTT 60.038 50.000 6.85 0.0 0.00 2.85 F
249 250 0.039074 CTTCTCTCGGCGACAGTTGT 60.039 55.000 4.99 0.0 0.00 3.32 F
620 624 0.179081 GTCGCTAGGTGGTTGGATCC 60.179 60.000 4.20 4.2 0.00 3.36 F
1910 1920 1.152881 GTAAGGCTGGCAGGATGGG 60.153 63.158 17.64 0.0 35.86 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 1603 0.037975 CCTCAAACAATGCCACAGCC 60.038 55.00 0.00 0.0 38.69 4.85 R
2018 2028 0.462581 CTGATACACTGCCACCGCAT 60.463 55.00 0.00 0.0 46.11 4.73 R
2440 2450 8.732531 CATTTTATGGAAAAATGTGATGGCTTT 58.267 29.63 12.76 0.0 40.73 3.51 R
2848 2858 0.036306 GAGGGACAAGCTTTTCCGGA 59.964 55.00 22.30 0.0 32.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.057969 CTAGGGTTTGTGTCATGCTCA 57.942 47.619 0.00 0.00 0.00 4.26
21 22 2.363306 AGGGTTTGTGTCATGCTCAA 57.637 45.000 0.00 0.00 0.00 3.02
22 23 2.233271 AGGGTTTGTGTCATGCTCAAG 58.767 47.619 0.00 0.00 32.96 3.02
23 24 2.158623 AGGGTTTGTGTCATGCTCAAGA 60.159 45.455 0.00 0.00 32.96 3.02
24 25 2.622942 GGGTTTGTGTCATGCTCAAGAA 59.377 45.455 0.00 0.00 32.96 2.52
25 26 3.304928 GGGTTTGTGTCATGCTCAAGAAG 60.305 47.826 0.00 0.00 32.96 2.85
26 27 3.565482 GGTTTGTGTCATGCTCAAGAAGA 59.435 43.478 0.00 0.00 32.96 2.87
27 28 4.531332 GTTTGTGTCATGCTCAAGAAGAC 58.469 43.478 0.00 0.00 32.96 3.01
28 29 2.407090 TGTGTCATGCTCAAGAAGACG 58.593 47.619 0.00 0.00 32.08 4.18
29 30 2.035832 TGTGTCATGCTCAAGAAGACGA 59.964 45.455 0.00 0.00 32.08 4.20
30 31 2.665537 GTGTCATGCTCAAGAAGACGAG 59.334 50.000 0.00 0.00 32.08 4.18
31 32 2.558359 TGTCATGCTCAAGAAGACGAGA 59.442 45.455 0.00 0.00 32.08 4.04
32 33 2.920490 GTCATGCTCAAGAAGACGAGAC 59.080 50.000 0.00 0.00 0.00 3.36
33 34 1.916651 CATGCTCAAGAAGACGAGACG 59.083 52.381 0.00 0.00 0.00 4.18
34 35 0.241213 TGCTCAAGAAGACGAGACGG 59.759 55.000 0.00 0.00 0.00 4.79
35 36 1.073768 GCTCAAGAAGACGAGACGGC 61.074 60.000 0.00 0.00 33.59 5.68
36 37 0.794981 CTCAAGAAGACGAGACGGCG 60.795 60.000 4.80 4.80 41.28 6.46
37 38 1.209383 CAAGAAGACGAGACGGCGA 59.791 57.895 16.62 0.00 41.28 5.54
38 39 0.794981 CAAGAAGACGAGACGGCGAG 60.795 60.000 16.62 4.26 41.28 5.03
39 40 1.924320 AAGAAGACGAGACGGCGAGG 61.924 60.000 16.62 1.37 41.28 4.63
40 41 2.359602 AAGACGAGACGGCGAGGA 60.360 61.111 16.62 0.00 41.28 3.71
41 42 2.580720 GAAGACGAGACGGCGAGGAC 62.581 65.000 16.62 1.68 41.28 3.85
42 43 3.126225 GACGAGACGGCGAGGACT 61.126 66.667 16.62 7.15 34.83 3.85
43 44 2.672307 ACGAGACGGCGAGGACTT 60.672 61.111 16.62 0.00 34.83 3.01
44 45 2.100603 CGAGACGGCGAGGACTTC 59.899 66.667 16.62 0.00 0.00 3.01
45 46 2.400158 CGAGACGGCGAGGACTTCT 61.400 63.158 16.62 4.09 0.00 2.85
46 47 1.884444 GAGACGGCGAGGACTTCTT 59.116 57.895 16.62 0.00 0.00 2.52
47 48 0.456995 GAGACGGCGAGGACTTCTTG 60.457 60.000 16.62 0.00 0.00 3.02
55 56 3.459232 CGAGGACTTCTTGCATATGGA 57.541 47.619 4.56 0.00 0.00 3.41
56 57 3.797039 CGAGGACTTCTTGCATATGGAA 58.203 45.455 9.48 9.48 0.00 3.53
57 58 4.384056 CGAGGACTTCTTGCATATGGAAT 58.616 43.478 10.32 0.00 0.00 3.01
58 59 5.541845 CGAGGACTTCTTGCATATGGAATA 58.458 41.667 10.32 0.17 0.00 1.75
59 60 5.991606 CGAGGACTTCTTGCATATGGAATAA 59.008 40.000 10.32 8.66 29.06 1.40
60 61 6.146837 CGAGGACTTCTTGCATATGGAATAAG 59.853 42.308 24.28 24.28 36.27 1.73
61 62 6.302269 AGGACTTCTTGCATATGGAATAAGG 58.698 40.000 27.26 15.59 35.14 2.69
62 63 6.064717 GGACTTCTTGCATATGGAATAAGGT 58.935 40.000 27.26 17.87 35.14 3.50
63 64 6.547510 GGACTTCTTGCATATGGAATAAGGTT 59.452 38.462 27.26 14.91 35.14 3.50
64 65 7.255277 GGACTTCTTGCATATGGAATAAGGTTC 60.255 40.741 27.26 19.89 35.14 3.62
65 66 6.547510 ACTTCTTGCATATGGAATAAGGTTCC 59.452 38.462 27.26 0.00 35.14 3.62
66 67 5.385198 TCTTGCATATGGAATAAGGTTCCC 58.615 41.667 10.32 0.00 37.79 3.97
67 68 5.134339 TCTTGCATATGGAATAAGGTTCCCT 59.866 40.000 10.32 0.00 37.79 4.20
68 69 4.985538 TGCATATGGAATAAGGTTCCCTC 58.014 43.478 4.56 0.00 37.79 4.30
69 70 4.202567 TGCATATGGAATAAGGTTCCCTCC 60.203 45.833 4.56 0.00 37.79 4.30
70 71 4.579869 CATATGGAATAAGGTTCCCTCCG 58.420 47.826 4.50 0.00 37.79 4.63
71 72 0.544697 TGGAATAAGGTTCCCTCCGC 59.455 55.000 4.50 0.00 37.79 5.54
72 73 0.179026 GGAATAAGGTTCCCTCCGCC 60.179 60.000 0.00 0.00 30.89 6.13
73 74 0.837940 GAATAAGGTTCCCTCCGCCT 59.162 55.000 0.00 0.00 30.89 5.52
74 75 2.044758 GAATAAGGTTCCCTCCGCCTA 58.955 52.381 0.00 0.00 30.89 3.93
75 76 1.718280 ATAAGGTTCCCTCCGCCTAG 58.282 55.000 0.00 0.00 30.89 3.02
76 77 1.047034 TAAGGTTCCCTCCGCCTAGC 61.047 60.000 0.00 0.00 30.89 3.42
77 78 3.862991 GGTTCCCTCCGCCTAGCC 61.863 72.222 0.00 0.00 0.00 3.93
78 79 2.764547 GTTCCCTCCGCCTAGCCT 60.765 66.667 0.00 0.00 0.00 4.58
79 80 2.444140 TTCCCTCCGCCTAGCCTC 60.444 66.667 0.00 0.00 0.00 4.70
80 81 4.541648 TCCCTCCGCCTAGCCTCC 62.542 72.222 0.00 0.00 0.00 4.30
81 82 4.860881 CCCTCCGCCTAGCCTCCA 62.861 72.222 0.00 0.00 0.00 3.86
82 83 2.525381 CCTCCGCCTAGCCTCCAT 60.525 66.667 0.00 0.00 0.00 3.41
83 84 2.578714 CCTCCGCCTAGCCTCCATC 61.579 68.421 0.00 0.00 0.00 3.51
84 85 2.524394 TCCGCCTAGCCTCCATCC 60.524 66.667 0.00 0.00 0.00 3.51
85 86 3.631046 CCGCCTAGCCTCCATCCC 61.631 72.222 0.00 0.00 0.00 3.85
86 87 3.996124 CGCCTAGCCTCCATCCCG 61.996 72.222 0.00 0.00 0.00 5.14
87 88 2.524394 GCCTAGCCTCCATCCCGA 60.524 66.667 0.00 0.00 0.00 5.14
88 89 2.873525 GCCTAGCCTCCATCCCGAC 61.874 68.421 0.00 0.00 0.00 4.79
89 90 2.565645 CCTAGCCTCCATCCCGACG 61.566 68.421 0.00 0.00 0.00 5.12
90 91 1.528542 CTAGCCTCCATCCCGACGA 60.529 63.158 0.00 0.00 0.00 4.20
91 92 0.896019 CTAGCCTCCATCCCGACGAT 60.896 60.000 0.00 0.00 0.00 3.73
92 93 1.179174 TAGCCTCCATCCCGACGATG 61.179 60.000 0.00 5.69 46.95 3.84
93 94 2.029666 CCTCCATCCCGACGATGC 59.970 66.667 0.00 0.00 46.17 3.91
94 95 2.502492 CCTCCATCCCGACGATGCT 61.502 63.158 0.00 0.00 46.17 3.79
95 96 1.443407 CTCCATCCCGACGATGCTT 59.557 57.895 0.00 0.00 46.17 3.91
96 97 0.598680 CTCCATCCCGACGATGCTTC 60.599 60.000 0.00 0.00 46.17 3.86
97 98 1.143838 CCATCCCGACGATGCTTCA 59.856 57.895 0.00 0.00 46.17 3.02
98 99 0.461870 CCATCCCGACGATGCTTCAA 60.462 55.000 0.00 0.00 46.17 2.69
99 100 0.933097 CATCCCGACGATGCTTCAAG 59.067 55.000 0.00 0.00 41.99 3.02
100 101 0.811616 ATCCCGACGATGCTTCAAGC 60.812 55.000 1.04 1.04 42.82 4.01
101 102 2.697425 CCGACGATGCTTCAAGCG 59.303 61.111 4.57 0.00 46.26 4.68
102 103 2.094659 CCGACGATGCTTCAAGCGT 61.095 57.895 2.94 2.94 46.26 5.07
107 108 1.341802 GATGCTTCAAGCGTCGTCG 59.658 57.895 15.85 0.00 45.95 5.12
108 109 1.071019 GATGCTTCAAGCGTCGTCGA 61.071 55.000 15.85 0.00 45.95 4.20
109 110 0.666274 ATGCTTCAAGCGTCGTCGAA 60.666 50.000 4.57 0.00 46.26 3.71
110 111 1.275471 TGCTTCAAGCGTCGTCGAAG 61.275 55.000 4.57 3.62 46.26 3.79
111 112 1.945776 GCTTCAAGCGTCGTCGAAGG 61.946 60.000 6.17 0.40 39.71 3.46
112 113 1.344942 CTTCAAGCGTCGTCGAAGGG 61.345 60.000 6.17 0.00 39.71 3.95
113 114 3.479269 CAAGCGTCGTCGAAGGGC 61.479 66.667 6.17 8.02 39.71 5.19
117 118 4.695231 CGTCGTCGAAGGGCGTGT 62.695 66.667 0.00 0.00 41.80 4.49
118 119 3.103911 GTCGTCGAAGGGCGTGTG 61.104 66.667 0.00 0.00 41.80 3.82
119 120 4.351938 TCGTCGAAGGGCGTGTGG 62.352 66.667 0.00 0.00 41.80 4.17
120 121 4.351938 CGTCGAAGGGCGTGTGGA 62.352 66.667 0.00 0.00 41.80 4.02
121 122 2.432628 GTCGAAGGGCGTGTGGAG 60.433 66.667 0.00 0.00 41.80 3.86
122 123 3.691342 TCGAAGGGCGTGTGGAGG 61.691 66.667 0.00 0.00 41.80 4.30
123 124 4.003788 CGAAGGGCGTGTGGAGGT 62.004 66.667 0.00 0.00 34.64 3.85
124 125 2.358737 GAAGGGCGTGTGGAGGTG 60.359 66.667 0.00 0.00 0.00 4.00
125 126 3.168528 AAGGGCGTGTGGAGGTGT 61.169 61.111 0.00 0.00 0.00 4.16
126 127 3.476031 AAGGGCGTGTGGAGGTGTG 62.476 63.158 0.00 0.00 0.00 3.82
127 128 4.250305 GGGCGTGTGGAGGTGTGT 62.250 66.667 0.00 0.00 0.00 3.72
128 129 2.738480 GGCGTGTGGAGGTGTGTA 59.262 61.111 0.00 0.00 0.00 2.90
129 130 1.295423 GGCGTGTGGAGGTGTGTAT 59.705 57.895 0.00 0.00 0.00 2.29
130 131 0.739813 GGCGTGTGGAGGTGTGTATC 60.740 60.000 0.00 0.00 0.00 2.24
131 132 0.246635 GCGTGTGGAGGTGTGTATCT 59.753 55.000 0.00 0.00 0.00 1.98
132 133 1.996292 CGTGTGGAGGTGTGTATCTG 58.004 55.000 0.00 0.00 0.00 2.90
133 134 1.404181 CGTGTGGAGGTGTGTATCTGG 60.404 57.143 0.00 0.00 0.00 3.86
134 135 0.613260 TGTGGAGGTGTGTATCTGGC 59.387 55.000 0.00 0.00 0.00 4.85
135 136 0.613260 GTGGAGGTGTGTATCTGGCA 59.387 55.000 0.00 0.00 0.00 4.92
136 137 0.904649 TGGAGGTGTGTATCTGGCAG 59.095 55.000 8.58 8.58 0.00 4.85
137 138 1.195115 GGAGGTGTGTATCTGGCAGA 58.805 55.000 21.19 21.19 0.00 4.26
138 139 1.765314 GGAGGTGTGTATCTGGCAGAT 59.235 52.381 30.89 30.89 38.70 2.90
139 140 2.224161 GGAGGTGTGTATCTGGCAGATC 60.224 54.545 31.94 22.37 36.20 2.75
140 141 2.697751 GAGGTGTGTATCTGGCAGATCT 59.302 50.000 31.94 21.33 36.20 2.75
141 142 2.697751 AGGTGTGTATCTGGCAGATCTC 59.302 50.000 31.94 24.38 36.20 2.75
142 143 2.544694 GGTGTGTATCTGGCAGATCTCG 60.545 54.545 31.94 0.00 36.20 4.04
143 144 2.099921 GTGTGTATCTGGCAGATCTCGT 59.900 50.000 31.94 12.93 36.20 4.18
144 145 3.315470 GTGTGTATCTGGCAGATCTCGTA 59.685 47.826 31.94 12.91 36.20 3.43
145 146 3.565902 TGTGTATCTGGCAGATCTCGTAG 59.434 47.826 31.94 0.00 36.20 3.51
146 147 3.057876 GTGTATCTGGCAGATCTCGTAGG 60.058 52.174 31.94 0.00 36.20 3.18
147 148 2.666272 ATCTGGCAGATCTCGTAGGA 57.334 50.000 24.01 0.00 25.75 2.94
148 149 2.666272 TCTGGCAGATCTCGTAGGAT 57.334 50.000 14.43 0.00 0.00 3.24
149 150 2.950781 TCTGGCAGATCTCGTAGGATT 58.049 47.619 14.43 0.00 0.00 3.01
150 151 2.887783 TCTGGCAGATCTCGTAGGATTC 59.112 50.000 14.43 0.00 0.00 2.52
151 152 1.609072 TGGCAGATCTCGTAGGATTCG 59.391 52.381 0.00 0.00 0.00 3.34
152 153 1.068194 GGCAGATCTCGTAGGATTCGG 60.068 57.143 0.00 0.00 0.00 4.30
153 154 1.609555 GCAGATCTCGTAGGATTCGGT 59.390 52.381 0.00 0.00 0.00 4.69
154 155 2.350964 GCAGATCTCGTAGGATTCGGTC 60.351 54.545 0.00 0.00 0.00 4.79
155 156 2.096169 CAGATCTCGTAGGATTCGGTCG 60.096 54.545 0.00 0.00 0.00 4.79
156 157 1.197264 GATCTCGTAGGATTCGGTCGG 59.803 57.143 0.00 0.00 0.00 4.79
157 158 1.008767 CTCGTAGGATTCGGTCGGC 60.009 63.158 0.00 0.00 0.00 5.54
158 159 2.353145 CGTAGGATTCGGTCGGCG 60.353 66.667 0.00 0.00 0.00 6.46
159 160 2.803479 GTAGGATTCGGTCGGCGT 59.197 61.111 6.85 0.00 0.00 5.68
160 161 1.140375 GTAGGATTCGGTCGGCGTT 59.860 57.895 6.85 0.00 0.00 4.84
161 162 0.459063 GTAGGATTCGGTCGGCGTTT 60.459 55.000 6.85 0.00 0.00 3.60
162 163 0.179129 TAGGATTCGGTCGGCGTTTC 60.179 55.000 6.85 0.00 0.00 2.78
163 164 1.447314 GGATTCGGTCGGCGTTTCT 60.447 57.895 6.85 0.00 0.00 2.52
164 165 1.419107 GGATTCGGTCGGCGTTTCTC 61.419 60.000 6.85 0.00 0.00 2.87
165 166 0.458025 GATTCGGTCGGCGTTTCTCT 60.458 55.000 6.85 0.00 0.00 3.10
166 167 0.037605 ATTCGGTCGGCGTTTCTCTT 60.038 50.000 6.85 0.00 0.00 2.85
167 168 0.942410 TTCGGTCGGCGTTTCTCTTG 60.942 55.000 6.85 0.00 0.00 3.02
168 169 2.380410 CGGTCGGCGTTTCTCTTGG 61.380 63.158 6.85 0.00 0.00 3.61
169 170 1.301479 GGTCGGCGTTTCTCTTGGT 60.301 57.895 6.85 0.00 0.00 3.67
170 171 1.566018 GGTCGGCGTTTCTCTTGGTG 61.566 60.000 6.85 0.00 0.00 4.17
171 172 1.301401 TCGGCGTTTCTCTTGGTGG 60.301 57.895 6.85 0.00 0.00 4.61
172 173 1.301401 CGGCGTTTCTCTTGGTGGA 60.301 57.895 0.00 0.00 0.00 4.02
173 174 0.673644 CGGCGTTTCTCTTGGTGGAT 60.674 55.000 0.00 0.00 0.00 3.41
174 175 1.087501 GGCGTTTCTCTTGGTGGATC 58.912 55.000 0.00 0.00 0.00 3.36
175 176 1.087501 GCGTTTCTCTTGGTGGATCC 58.912 55.000 4.20 4.20 0.00 3.36
176 177 1.359848 CGTTTCTCTTGGTGGATCCG 58.640 55.000 7.39 0.00 39.52 4.18
177 178 1.739067 GTTTCTCTTGGTGGATCCGG 58.261 55.000 7.39 0.00 39.52 5.14
178 179 1.003233 GTTTCTCTTGGTGGATCCGGT 59.997 52.381 7.39 0.00 39.52 5.28
179 180 0.902531 TTCTCTTGGTGGATCCGGTC 59.097 55.000 7.39 0.00 39.52 4.79
180 181 0.041238 TCTCTTGGTGGATCCGGTCT 59.959 55.000 7.39 0.00 39.52 3.85
181 182 0.905357 CTCTTGGTGGATCCGGTCTT 59.095 55.000 7.39 0.00 39.52 3.01
182 183 0.902531 TCTTGGTGGATCCGGTCTTC 59.097 55.000 7.39 0.00 39.52 2.87
183 184 0.460284 CTTGGTGGATCCGGTCTTCG 60.460 60.000 7.39 0.00 39.52 3.79
184 185 1.189524 TTGGTGGATCCGGTCTTCGT 61.190 55.000 7.39 0.00 39.52 3.85
185 186 1.189524 TGGTGGATCCGGTCTTCGTT 61.190 55.000 7.39 0.00 39.52 3.85
186 187 0.459759 GGTGGATCCGGTCTTCGTTC 60.460 60.000 7.39 0.00 37.11 3.95
187 188 0.245539 GTGGATCCGGTCTTCGTTCA 59.754 55.000 7.39 0.00 37.11 3.18
188 189 1.134788 GTGGATCCGGTCTTCGTTCAT 60.135 52.381 7.39 0.00 37.11 2.57
189 190 1.136305 TGGATCCGGTCTTCGTTCATC 59.864 52.381 7.39 0.00 37.11 2.92
190 191 1.409427 GGATCCGGTCTTCGTTCATCT 59.591 52.381 0.00 0.00 37.11 2.90
191 192 2.621998 GGATCCGGTCTTCGTTCATCTA 59.378 50.000 0.00 0.00 37.11 1.98
192 193 3.550436 GGATCCGGTCTTCGTTCATCTAC 60.550 52.174 0.00 0.00 37.11 2.59
193 194 2.439409 TCCGGTCTTCGTTCATCTACA 58.561 47.619 0.00 0.00 37.11 2.74
194 195 3.021695 TCCGGTCTTCGTTCATCTACAT 58.978 45.455 0.00 0.00 37.11 2.29
195 196 3.446161 TCCGGTCTTCGTTCATCTACATT 59.554 43.478 0.00 0.00 37.11 2.71
196 197 4.081862 TCCGGTCTTCGTTCATCTACATTT 60.082 41.667 0.00 0.00 37.11 2.32
197 198 4.032900 CCGGTCTTCGTTCATCTACATTTG 59.967 45.833 0.00 0.00 37.11 2.32
198 199 4.492570 CGGTCTTCGTTCATCTACATTTGC 60.493 45.833 0.00 0.00 0.00 3.68
199 200 4.492570 GGTCTTCGTTCATCTACATTTGCG 60.493 45.833 0.00 0.00 0.00 4.85
200 201 4.091509 GTCTTCGTTCATCTACATTTGCGT 59.908 41.667 0.00 0.00 0.00 5.24
201 202 3.989705 TCGTTCATCTACATTTGCGTG 57.010 42.857 0.00 0.00 0.00 5.34
202 203 3.322369 TCGTTCATCTACATTTGCGTGT 58.678 40.909 0.00 0.00 36.13 4.49
203 204 3.366724 TCGTTCATCTACATTTGCGTGTC 59.633 43.478 0.00 0.00 33.62 3.67
204 205 3.367932 CGTTCATCTACATTTGCGTGTCT 59.632 43.478 0.00 0.00 33.62 3.41
205 206 4.641954 GTTCATCTACATTTGCGTGTCTG 58.358 43.478 0.00 0.00 33.62 3.51
206 207 2.672874 TCATCTACATTTGCGTGTCTGC 59.327 45.455 0.00 0.00 33.62 4.26
207 208 2.162319 TCTACATTTGCGTGTCTGCA 57.838 45.000 0.00 0.00 44.61 4.41
213 214 2.591429 TGCGTGTCTGCAGGTTGG 60.591 61.111 15.13 2.61 40.62 3.77
214 215 2.280797 GCGTGTCTGCAGGTTGGA 60.281 61.111 15.13 0.00 33.42 3.53
215 216 1.672356 GCGTGTCTGCAGGTTGGAT 60.672 57.895 15.13 0.00 33.42 3.41
216 217 1.639298 GCGTGTCTGCAGGTTGGATC 61.639 60.000 15.13 0.00 33.42 3.36
217 218 1.021390 CGTGTCTGCAGGTTGGATCC 61.021 60.000 15.13 4.20 0.00 3.36
218 219 0.326264 GTGTCTGCAGGTTGGATCCT 59.674 55.000 15.13 0.00 38.51 3.24
219 220 1.067295 TGTCTGCAGGTTGGATCCTT 58.933 50.000 15.13 0.00 35.37 3.36
220 221 1.003580 TGTCTGCAGGTTGGATCCTTC 59.996 52.381 15.13 5.77 35.37 3.46
221 222 0.620556 TCTGCAGGTTGGATCCTTCC 59.379 55.000 15.13 14.69 42.94 3.46
222 223 0.745845 CTGCAGGTTGGATCCTTCCG 60.746 60.000 14.23 11.79 45.89 4.30
223 224 1.198094 TGCAGGTTGGATCCTTCCGA 61.198 55.000 14.23 2.83 45.89 4.55
224 225 0.181350 GCAGGTTGGATCCTTCCGAT 59.819 55.000 14.23 0.00 45.89 4.18
225 226 1.811941 GCAGGTTGGATCCTTCCGATC 60.812 57.143 14.23 6.33 45.89 3.69
226 227 1.765314 CAGGTTGGATCCTTCCGATCT 59.235 52.381 14.23 0.00 46.42 2.75
227 228 2.965831 CAGGTTGGATCCTTCCGATCTA 59.034 50.000 14.23 0.00 44.03 1.98
228 229 2.966516 AGGTTGGATCCTTCCGATCTAC 59.033 50.000 14.23 0.00 44.03 2.59
229 230 2.288273 GGTTGGATCCTTCCGATCTACG 60.288 54.545 14.23 0.00 45.90 3.51
230 231 0.959553 TGGATCCTTCCGATCTACGC 59.040 55.000 14.23 0.00 45.90 4.42
231 232 1.249407 GGATCCTTCCGATCTACGCT 58.751 55.000 3.84 0.00 45.90 5.07
232 233 1.614413 GGATCCTTCCGATCTACGCTT 59.386 52.381 3.84 0.00 45.90 4.68
233 234 2.351932 GGATCCTTCCGATCTACGCTTC 60.352 54.545 3.84 0.00 45.90 3.86
234 235 2.054232 TCCTTCCGATCTACGCTTCT 57.946 50.000 0.00 0.00 41.07 2.85
235 236 1.948145 TCCTTCCGATCTACGCTTCTC 59.052 52.381 0.00 0.00 41.07 2.87
236 237 1.950909 CCTTCCGATCTACGCTTCTCT 59.049 52.381 0.00 0.00 41.07 3.10
237 238 2.031508 CCTTCCGATCTACGCTTCTCTC 60.032 54.545 0.00 0.00 41.07 3.20
238 239 1.218763 TCCGATCTACGCTTCTCTCG 58.781 55.000 0.00 0.00 41.07 4.04
239 240 0.236187 CCGATCTACGCTTCTCTCGG 59.764 60.000 0.00 0.00 39.58 4.63
240 241 0.384974 CGATCTACGCTTCTCTCGGC 60.385 60.000 0.00 0.00 34.51 5.54
246 247 2.569134 GCTTCTCTCGGCGACAGT 59.431 61.111 4.99 0.00 0.00 3.55
247 248 1.080434 GCTTCTCTCGGCGACAGTT 60.080 57.895 4.99 0.00 0.00 3.16
248 249 1.347817 GCTTCTCTCGGCGACAGTTG 61.348 60.000 4.99 4.23 0.00 3.16
249 250 0.039074 CTTCTCTCGGCGACAGTTGT 60.039 55.000 4.99 0.00 0.00 3.32
250 251 0.387929 TTCTCTCGGCGACAGTTGTT 59.612 50.000 4.99 0.00 0.00 2.83
251 252 1.241165 TCTCTCGGCGACAGTTGTTA 58.759 50.000 4.99 0.00 0.00 2.41
252 253 1.816835 TCTCTCGGCGACAGTTGTTAT 59.183 47.619 4.99 0.00 0.00 1.89
253 254 2.230508 TCTCTCGGCGACAGTTGTTATT 59.769 45.455 4.99 0.00 0.00 1.40
254 255 2.599082 CTCTCGGCGACAGTTGTTATTC 59.401 50.000 4.99 0.00 0.00 1.75
255 256 2.230508 TCTCGGCGACAGTTGTTATTCT 59.769 45.455 4.99 0.00 0.00 2.40
256 257 2.333926 TCGGCGACAGTTGTTATTCTG 58.666 47.619 4.99 0.00 37.65 3.02
257 258 1.393539 CGGCGACAGTTGTTATTCTGG 59.606 52.381 0.00 0.00 36.17 3.86
258 259 2.423577 GGCGACAGTTGTTATTCTGGT 58.576 47.619 0.00 0.00 36.17 4.00
259 260 2.159627 GGCGACAGTTGTTATTCTGGTG 59.840 50.000 0.00 0.00 36.17 4.17
260 261 2.412847 GCGACAGTTGTTATTCTGGTGC 60.413 50.000 0.00 0.00 36.17 5.01
261 262 2.159841 CGACAGTTGTTATTCTGGTGCG 60.160 50.000 0.00 0.00 36.17 5.34
262 263 2.806244 GACAGTTGTTATTCTGGTGCGT 59.194 45.455 0.00 0.00 36.17 5.24
263 264 3.211045 ACAGTTGTTATTCTGGTGCGTT 58.789 40.909 0.00 0.00 36.17 4.84
264 265 3.003275 ACAGTTGTTATTCTGGTGCGTTG 59.997 43.478 0.00 0.00 36.17 4.10
265 266 2.552315 AGTTGTTATTCTGGTGCGTTGG 59.448 45.455 0.00 0.00 0.00 3.77
266 267 2.264005 TGTTATTCTGGTGCGTTGGT 57.736 45.000 0.00 0.00 0.00 3.67
267 268 2.147958 TGTTATTCTGGTGCGTTGGTC 58.852 47.619 0.00 0.00 0.00 4.02
268 269 1.127951 GTTATTCTGGTGCGTTGGTCG 59.872 52.381 0.00 0.00 43.12 4.79
269 270 0.319083 TATTCTGGTGCGTTGGTCGT 59.681 50.000 0.00 0.00 42.13 4.34
270 271 0.319083 ATTCTGGTGCGTTGGTCGTA 59.681 50.000 0.00 0.00 42.13 3.43
271 272 0.319083 TTCTGGTGCGTTGGTCGTAT 59.681 50.000 0.00 0.00 42.13 3.06
272 273 0.389296 TCTGGTGCGTTGGTCGTATG 60.389 55.000 0.00 0.00 42.13 2.39
273 274 1.358725 CTGGTGCGTTGGTCGTATGG 61.359 60.000 0.00 0.00 42.13 2.74
274 275 2.104253 GGTGCGTTGGTCGTATGGG 61.104 63.158 0.00 0.00 42.13 4.00
275 276 2.104253 GTGCGTTGGTCGTATGGGG 61.104 63.158 0.00 0.00 42.13 4.96
276 277 2.266689 GCGTTGGTCGTATGGGGT 59.733 61.111 0.00 0.00 42.13 4.95
277 278 1.812507 GCGTTGGTCGTATGGGGTC 60.813 63.158 0.00 0.00 42.13 4.46
278 279 1.895238 CGTTGGTCGTATGGGGTCT 59.105 57.895 0.00 0.00 34.52 3.85
279 280 0.248289 CGTTGGTCGTATGGGGTCTT 59.752 55.000 0.00 0.00 34.52 3.01
280 281 1.477700 CGTTGGTCGTATGGGGTCTTA 59.522 52.381 0.00 0.00 34.52 2.10
281 282 2.480759 CGTTGGTCGTATGGGGTCTTAG 60.481 54.545 0.00 0.00 34.52 2.18
282 283 1.117150 TGGTCGTATGGGGTCTTAGC 58.883 55.000 0.00 0.00 0.00 3.09
283 284 1.117150 GGTCGTATGGGGTCTTAGCA 58.883 55.000 0.00 0.00 0.00 3.49
284 285 1.202498 GGTCGTATGGGGTCTTAGCAC 60.202 57.143 0.00 0.00 0.00 4.40
285 286 0.742505 TCGTATGGGGTCTTAGCACG 59.257 55.000 0.00 0.00 0.00 5.34
286 287 0.249322 CGTATGGGGTCTTAGCACGG 60.249 60.000 0.00 0.00 0.00 4.94
287 288 0.532196 GTATGGGGTCTTAGCACGGC 60.532 60.000 0.00 0.00 0.00 5.68
288 289 2.023414 TATGGGGTCTTAGCACGGCG 62.023 60.000 4.80 4.80 0.00 6.46
289 290 3.766691 GGGGTCTTAGCACGGCGA 61.767 66.667 16.62 0.00 0.00 5.54
290 291 2.508663 GGGTCTTAGCACGGCGAC 60.509 66.667 16.62 5.01 0.00 5.19
291 292 2.572284 GGTCTTAGCACGGCGACT 59.428 61.111 16.62 13.42 0.00 4.18
292 293 1.805945 GGTCTTAGCACGGCGACTG 60.806 63.158 16.62 2.80 0.00 3.51
293 294 2.126071 TCTTAGCACGGCGACTGC 60.126 61.111 16.62 14.98 41.71 4.40
303 304 4.057428 GCGACTGCCCGACTGTCT 62.057 66.667 6.21 0.00 43.17 3.41
304 305 2.697761 GCGACTGCCCGACTGTCTA 61.698 63.158 6.21 0.00 43.17 2.59
305 306 1.136984 CGACTGCCCGACTGTCTAC 59.863 63.158 6.21 0.00 43.17 2.59
306 307 1.306642 CGACTGCCCGACTGTCTACT 61.307 60.000 6.21 0.00 43.17 2.57
307 308 1.747709 GACTGCCCGACTGTCTACTA 58.252 55.000 6.21 0.00 42.34 1.82
308 309 1.401199 GACTGCCCGACTGTCTACTAC 59.599 57.143 6.21 0.00 42.34 2.73
309 310 1.271762 ACTGCCCGACTGTCTACTACA 60.272 52.381 6.21 0.00 36.42 2.74
310 311 1.816835 CTGCCCGACTGTCTACTACAA 59.183 52.381 6.21 0.00 37.74 2.41
311 312 1.542915 TGCCCGACTGTCTACTACAAC 59.457 52.381 6.21 0.00 37.74 3.32
312 313 1.542915 GCCCGACTGTCTACTACAACA 59.457 52.381 6.21 0.00 37.74 3.33
313 314 2.029649 GCCCGACTGTCTACTACAACAA 60.030 50.000 6.21 0.00 37.74 2.83
314 315 3.368116 GCCCGACTGTCTACTACAACAAT 60.368 47.826 6.21 0.00 37.74 2.71
315 316 4.174009 CCCGACTGTCTACTACAACAATG 58.826 47.826 6.21 0.00 37.74 2.82
587 588 4.484258 GCGCCTTCGACTCGCTCT 62.484 66.667 15.17 0.00 44.79 4.09
588 589 2.277628 CGCCTTCGACTCGCTCTC 60.278 66.667 0.00 0.00 38.10 3.20
595 596 2.148982 CGACTCGCTCTCGTGCTTG 61.149 63.158 0.00 0.00 36.96 4.01
620 624 0.179081 GTCGCTAGGTGGTTGGATCC 60.179 60.000 4.20 4.20 0.00 3.36
680 684 6.017605 ACCTTGACGATTGATGAATAGATTGC 60.018 38.462 0.00 0.00 0.00 3.56
706 710 4.894798 TTTCTCGCAAAAACAACAACAC 57.105 36.364 0.00 0.00 0.00 3.32
724 728 8.303156 CAACAACACCACATTCCAAATAATCTA 58.697 33.333 0.00 0.00 0.00 1.98
867 877 5.011023 ACAGATTTACAGAAAAGCCCCAAAG 59.989 40.000 0.00 0.00 33.86 2.77
1044 1054 3.465403 CTCCTCCAGCTCCGGGTG 61.465 72.222 0.00 0.00 40.29 4.61
1338 1348 1.814527 GTCCGCTCATTCCTACCGT 59.185 57.895 0.00 0.00 0.00 4.83
1646 1656 3.474693 GAGAGTATATTCTCCGGACGC 57.525 52.381 13.00 0.00 38.10 5.19
1663 1673 1.291184 CGCGTGGAGCTTCAATGTCA 61.291 55.000 0.00 0.00 45.59 3.58
1701 1711 2.703007 CAAGGTGGGGGATGTTCAAAAA 59.297 45.455 0.00 0.00 0.00 1.94
1743 1753 2.655090 TGGATGAGTTTGGTTGCTCA 57.345 45.000 0.00 0.00 44.55 4.26
1910 1920 1.152881 GTAAGGCTGGCAGGATGGG 60.153 63.158 17.64 0.00 35.86 4.00
2018 2028 1.780309 CAAGGCTGGGAATATGGGGTA 59.220 52.381 0.00 0.00 0.00 3.69
2440 2450 2.777114 TGCATGAAGGGTAGGATAGCAA 59.223 45.455 0.00 0.00 41.82 3.91
2750 2760 6.015940 CCAAATAAGAAGAACAAGCTCTGGTT 60.016 38.462 0.00 0.00 0.00 3.67
2836 2846 7.827819 TCTGAACTATTTCCATACAAACTCG 57.172 36.000 0.00 0.00 0.00 4.18
2837 2847 7.383687 TCTGAACTATTTCCATACAAACTCGT 58.616 34.615 0.00 0.00 0.00 4.18
2838 2848 8.525316 TCTGAACTATTTCCATACAAACTCGTA 58.475 33.333 0.00 0.00 0.00 3.43
2839 2849 8.470040 TGAACTATTTCCATACAAACTCGTAC 57.530 34.615 0.00 0.00 0.00 3.67
2840 2850 8.308931 TGAACTATTTCCATACAAACTCGTACT 58.691 33.333 0.00 0.00 0.00 2.73
2841 2851 8.699283 AACTATTTCCATACAAACTCGTACTC 57.301 34.615 0.00 0.00 0.00 2.59
2842 2852 7.263496 ACTATTTCCATACAAACTCGTACTCC 58.737 38.462 0.00 0.00 0.00 3.85
2843 2853 4.460948 TTCCATACAAACTCGTACTCCC 57.539 45.455 0.00 0.00 0.00 4.30
2844 2854 3.705051 TCCATACAAACTCGTACTCCCT 58.295 45.455 0.00 0.00 0.00 4.20
2845 2855 3.698040 TCCATACAAACTCGTACTCCCTC 59.302 47.826 0.00 0.00 0.00 4.30
2846 2856 3.181478 CCATACAAACTCGTACTCCCTCC 60.181 52.174 0.00 0.00 0.00 4.30
2847 2857 0.886563 ACAAACTCGTACTCCCTCCG 59.113 55.000 0.00 0.00 0.00 4.63
2848 2858 0.886563 CAAACTCGTACTCCCTCCGT 59.113 55.000 0.00 0.00 0.00 4.69
2849 2859 1.135460 CAAACTCGTACTCCCTCCGTC 60.135 57.143 0.00 0.00 0.00 4.79
2850 2860 0.679321 AACTCGTACTCCCTCCGTCC 60.679 60.000 0.00 0.00 0.00 4.79
2851 2861 2.124983 TCGTACTCCCTCCGTCCG 60.125 66.667 0.00 0.00 0.00 4.79
2852 2862 3.207669 CGTACTCCCTCCGTCCGG 61.208 72.222 0.00 0.00 0.00 5.14
2853 2863 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
2854 2864 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2855 2865 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2856 2866 0.251742 TACTCCCTCCGTCCGGAAAA 60.252 55.000 5.23 0.00 44.66 2.29
2857 2867 1.218316 CTCCCTCCGTCCGGAAAAG 59.782 63.158 5.23 3.59 44.66 2.27
2858 2868 2.436115 CCCTCCGTCCGGAAAAGC 60.436 66.667 5.23 0.00 44.66 3.51
2859 2869 2.663196 CCTCCGTCCGGAAAAGCT 59.337 61.111 5.23 0.00 44.66 3.74
2860 2870 1.003718 CCTCCGTCCGGAAAAGCTT 60.004 57.895 5.23 0.00 44.66 3.74
2861 2871 1.298859 CCTCCGTCCGGAAAAGCTTG 61.299 60.000 5.23 0.00 44.66 4.01
2862 2872 0.602905 CTCCGTCCGGAAAAGCTTGT 60.603 55.000 5.23 0.00 44.66 3.16
2863 2873 0.601841 TCCGTCCGGAAAAGCTTGTC 60.602 55.000 5.23 8.23 42.05 3.18
2864 2874 1.574702 CCGTCCGGAAAAGCTTGTCC 61.575 60.000 24.00 24.00 37.50 4.02
2865 2875 1.574702 CGTCCGGAAAAGCTTGTCCC 61.575 60.000 26.94 13.97 0.00 4.46
2866 2876 0.250770 GTCCGGAAAAGCTTGTCCCT 60.251 55.000 26.94 0.00 0.00 4.20
2867 2877 0.036306 TCCGGAAAAGCTTGTCCCTC 59.964 55.000 26.94 5.77 0.00 4.30
2868 2878 0.250727 CCGGAAAAGCTTGTCCCTCA 60.251 55.000 26.94 0.00 0.00 3.86
2869 2879 1.604604 CGGAAAAGCTTGTCCCTCAA 58.395 50.000 26.94 0.00 34.61 3.02
2870 2880 1.953686 CGGAAAAGCTTGTCCCTCAAA 59.046 47.619 26.94 0.00 35.48 2.69
2871 2881 2.558359 CGGAAAAGCTTGTCCCTCAAAT 59.442 45.455 26.94 0.00 35.48 2.32
2872 2882 3.612479 CGGAAAAGCTTGTCCCTCAAATG 60.612 47.826 26.94 9.69 35.48 2.32
2873 2883 3.573967 GGAAAAGCTTGTCCCTCAAATGA 59.426 43.478 23.49 0.00 35.48 2.57
2874 2884 4.039124 GGAAAAGCTTGTCCCTCAAATGAA 59.961 41.667 23.49 0.00 35.48 2.57
2875 2885 5.279657 GGAAAAGCTTGTCCCTCAAATGAAT 60.280 40.000 23.49 0.00 35.48 2.57
2876 2886 4.796038 AAGCTTGTCCCTCAAATGAATG 57.204 40.909 0.00 0.00 35.48 2.67
2877 2887 3.771216 AGCTTGTCCCTCAAATGAATGT 58.229 40.909 0.00 0.00 35.48 2.71
2878 2888 4.922206 AGCTTGTCCCTCAAATGAATGTA 58.078 39.130 0.00 0.00 35.48 2.29
2879 2889 5.513233 AGCTTGTCCCTCAAATGAATGTAT 58.487 37.500 0.00 0.00 35.48 2.29
2880 2890 5.591877 AGCTTGTCCCTCAAATGAATGTATC 59.408 40.000 0.00 0.00 35.48 2.24
2881 2891 5.591877 GCTTGTCCCTCAAATGAATGTATCT 59.408 40.000 0.00 0.00 35.48 1.98
2882 2892 6.767902 GCTTGTCCCTCAAATGAATGTATCTA 59.232 38.462 0.00 0.00 35.48 1.98
2883 2893 7.041508 GCTTGTCCCTCAAATGAATGTATCTAG 60.042 40.741 0.00 0.00 35.48 2.43
2884 2894 6.291377 TGTCCCTCAAATGAATGTATCTAGC 58.709 40.000 0.00 0.00 0.00 3.42
2885 2895 6.126796 TGTCCCTCAAATGAATGTATCTAGCA 60.127 38.462 0.00 0.00 0.00 3.49
2886 2896 6.203723 GTCCCTCAAATGAATGTATCTAGCAC 59.796 42.308 0.00 0.00 0.00 4.40
2887 2897 5.471456 CCCTCAAATGAATGTATCTAGCACC 59.529 44.000 0.00 0.00 0.00 5.01
2888 2898 6.057533 CCTCAAATGAATGTATCTAGCACCA 58.942 40.000 0.00 0.00 0.00 4.17
2889 2899 6.543465 CCTCAAATGAATGTATCTAGCACCAA 59.457 38.462 0.00 0.00 0.00 3.67
2890 2900 7.255035 CCTCAAATGAATGTATCTAGCACCAAG 60.255 40.741 0.00 0.00 0.00 3.61
2891 2901 7.112122 TCAAATGAATGTATCTAGCACCAAGT 58.888 34.615 0.00 0.00 0.00 3.16
2892 2902 7.611467 TCAAATGAATGTATCTAGCACCAAGTT 59.389 33.333 0.00 0.00 0.00 2.66
2893 2903 8.892723 CAAATGAATGTATCTAGCACCAAGTTA 58.107 33.333 0.00 0.00 0.00 2.24
2894 2904 8.668510 AATGAATGTATCTAGCACCAAGTTAG 57.331 34.615 0.00 0.00 32.79 2.34
2895 2905 7.182817 TGAATGTATCTAGCACCAAGTTAGT 57.817 36.000 0.00 0.00 33.25 2.24
2896 2906 7.041721 TGAATGTATCTAGCACCAAGTTAGTG 58.958 38.462 0.00 0.00 38.30 2.74
2908 2918 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2909 2919 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2910 2920 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
2911 2921 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
2912 2922 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
2913 2923 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
2914 2924 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
2915 2925 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
2916 2926 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
2917 2927 5.604231 AGTGCTAGATACATCCATTTGAGGA 59.396 40.000 0.00 0.00 43.01 3.71
2918 2928 6.100279 AGTGCTAGATACATCCATTTGAGGAA 59.900 38.462 0.00 0.00 41.92 3.36
2919 2929 6.203723 GTGCTAGATACATCCATTTGAGGAAC 59.796 42.308 0.00 0.00 41.92 3.62
2920 2930 6.126796 TGCTAGATACATCCATTTGAGGAACA 60.127 38.462 0.00 0.00 41.92 3.18
2921 2931 6.767902 GCTAGATACATCCATTTGAGGAACAA 59.232 38.462 0.00 0.00 41.92 2.83
2922 2932 7.041508 GCTAGATACATCCATTTGAGGAACAAG 60.042 40.741 0.00 0.00 41.92 3.16
2923 2933 5.591877 AGATACATCCATTTGAGGAACAAGC 59.408 40.000 0.00 0.00 41.92 4.01
2924 2934 3.771216 ACATCCATTTGAGGAACAAGCT 58.229 40.909 0.00 0.00 41.92 3.74
2925 2935 4.154942 ACATCCATTTGAGGAACAAGCTT 58.845 39.130 0.00 0.00 41.92 3.74
2926 2936 4.021719 ACATCCATTTGAGGAACAAGCTTG 60.022 41.667 24.84 24.84 41.92 4.01
2927 2937 2.892852 TCCATTTGAGGAACAAGCTTGG 59.107 45.455 29.18 12.28 39.77 3.61
2928 2938 2.028748 CCATTTGAGGAACAAGCTTGGG 60.029 50.000 29.18 13.19 39.77 4.12
2929 2939 2.746279 TTTGAGGAACAAGCTTGGGA 57.254 45.000 29.18 4.51 39.77 4.37
2930 2940 1.981256 TTGAGGAACAAGCTTGGGAC 58.019 50.000 29.18 17.88 34.20 4.46
2931 2941 0.843309 TGAGGAACAAGCTTGGGACA 59.157 50.000 29.18 17.71 0.00 4.02
2932 2942 2.357673 TTGAGGAACAAGCTTGGGACAA 60.358 45.455 29.18 21.59 37.48 3.18
2933 2943 4.249028 TTGAGGAACAAGCTTGGGACAAG 61.249 47.826 29.18 3.71 37.48 3.16
2945 2955 1.946768 TGGGACAAGCTTTTTCAGACG 59.053 47.619 0.00 0.00 31.92 4.18
2946 2956 1.266989 GGGACAAGCTTTTTCAGACGG 59.733 52.381 0.00 0.00 0.00 4.79
2947 2957 2.218603 GGACAAGCTTTTTCAGACGGA 58.781 47.619 0.00 0.00 0.00 4.69
2948 2958 2.224314 GGACAAGCTTTTTCAGACGGAG 59.776 50.000 0.00 0.00 0.00 4.63
2949 2959 2.222027 ACAAGCTTTTTCAGACGGAGG 58.778 47.619 0.00 0.00 0.00 4.30
2950 2960 1.537202 CAAGCTTTTTCAGACGGAGGG 59.463 52.381 0.00 0.00 0.00 4.30
2951 2961 1.056660 AGCTTTTTCAGACGGAGGGA 58.943 50.000 0.00 0.00 0.00 4.20
3118 3128 1.984297 GTTCGAGTCCGTAGAAACTGC 59.016 52.381 0.00 0.00 37.05 4.40
3228 3240 2.480419 GTCATGTGAACTGTACTGCACC 59.520 50.000 0.00 0.00 0.00 5.01
3555 3569 1.442769 CTCAATGGACCCTTGACACG 58.557 55.000 8.02 0.00 0.00 4.49
3641 3655 0.178990 AACCTGCCTGTCAAGAACCC 60.179 55.000 0.00 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.072330 TCTTGAGCATGACACAAACCCTA 59.928 43.478 0.00 0.00 0.00 3.53
2 3 2.158623 TCTTGAGCATGACACAAACCCT 60.159 45.455 0.00 0.00 0.00 4.34
3 4 2.229792 TCTTGAGCATGACACAAACCC 58.770 47.619 0.00 0.00 0.00 4.11
7 8 2.802247 CGTCTTCTTGAGCATGACACAA 59.198 45.455 0.00 0.00 0.00 3.33
8 9 2.035832 TCGTCTTCTTGAGCATGACACA 59.964 45.455 0.00 0.00 0.00 3.72
9 10 2.665537 CTCGTCTTCTTGAGCATGACAC 59.334 50.000 0.00 0.00 0.00 3.67
10 11 2.558359 TCTCGTCTTCTTGAGCATGACA 59.442 45.455 0.00 0.00 32.20 3.58
11 12 2.920490 GTCTCGTCTTCTTGAGCATGAC 59.080 50.000 0.00 0.00 32.20 3.06
12 13 2.414691 CGTCTCGTCTTCTTGAGCATGA 60.415 50.000 0.00 0.00 32.20 3.07
13 14 1.916651 CGTCTCGTCTTCTTGAGCATG 59.083 52.381 0.00 0.00 32.20 4.06
14 15 1.135257 CCGTCTCGTCTTCTTGAGCAT 60.135 52.381 0.00 0.00 32.20 3.79
15 16 0.241213 CCGTCTCGTCTTCTTGAGCA 59.759 55.000 0.00 0.00 32.20 4.26
16 17 1.073768 GCCGTCTCGTCTTCTTGAGC 61.074 60.000 0.00 0.00 32.20 4.26
17 18 0.794981 CGCCGTCTCGTCTTCTTGAG 60.795 60.000 0.00 0.00 0.00 3.02
18 19 1.209383 CGCCGTCTCGTCTTCTTGA 59.791 57.895 0.00 0.00 0.00 3.02
19 20 0.794981 CTCGCCGTCTCGTCTTCTTG 60.795 60.000 0.00 0.00 0.00 3.02
20 21 1.502640 CTCGCCGTCTCGTCTTCTT 59.497 57.895 0.00 0.00 0.00 2.52
21 22 2.400158 CCTCGCCGTCTCGTCTTCT 61.400 63.158 0.00 0.00 0.00 2.85
22 23 2.100603 CCTCGCCGTCTCGTCTTC 59.899 66.667 0.00 0.00 0.00 2.87
23 24 2.359602 TCCTCGCCGTCTCGTCTT 60.360 61.111 0.00 0.00 0.00 3.01
24 25 3.126225 GTCCTCGCCGTCTCGTCT 61.126 66.667 0.00 0.00 0.00 4.18
25 26 2.580720 GAAGTCCTCGCCGTCTCGTC 62.581 65.000 0.00 0.00 0.00 4.20
26 27 2.672307 AAGTCCTCGCCGTCTCGT 60.672 61.111 0.00 0.00 0.00 4.18
27 28 1.924320 AAGAAGTCCTCGCCGTCTCG 61.924 60.000 0.00 0.00 0.00 4.04
28 29 0.456995 CAAGAAGTCCTCGCCGTCTC 60.457 60.000 0.00 0.00 0.00 3.36
29 30 1.587054 CAAGAAGTCCTCGCCGTCT 59.413 57.895 0.00 0.00 0.00 4.18
30 31 2.095252 GCAAGAAGTCCTCGCCGTC 61.095 63.158 0.00 0.00 0.00 4.79
31 32 2.048127 GCAAGAAGTCCTCGCCGT 60.048 61.111 0.00 0.00 0.00 5.68
32 33 0.179111 TATGCAAGAAGTCCTCGCCG 60.179 55.000 0.00 0.00 0.00 6.46
33 34 1.869767 CATATGCAAGAAGTCCTCGCC 59.130 52.381 0.00 0.00 0.00 5.54
34 35 1.869767 CCATATGCAAGAAGTCCTCGC 59.130 52.381 0.00 0.00 0.00 5.03
35 36 3.459232 TCCATATGCAAGAAGTCCTCG 57.541 47.619 0.00 0.00 0.00 4.63
36 37 6.429385 CCTTATTCCATATGCAAGAAGTCCTC 59.571 42.308 11.74 0.00 0.00 3.71
37 38 6.126361 ACCTTATTCCATATGCAAGAAGTCCT 60.126 38.462 11.74 0.00 0.00 3.85
38 39 6.064717 ACCTTATTCCATATGCAAGAAGTCC 58.935 40.000 11.74 0.00 0.00 3.85
39 40 7.255277 GGAACCTTATTCCATATGCAAGAAGTC 60.255 40.741 11.74 4.91 38.45 3.01
40 41 6.547510 GGAACCTTATTCCATATGCAAGAAGT 59.452 38.462 11.74 0.00 38.45 3.01
41 42 6.974965 GGAACCTTATTCCATATGCAAGAAG 58.025 40.000 6.76 6.76 38.45 2.85
42 43 6.959639 GGAACCTTATTCCATATGCAAGAA 57.040 37.500 0.00 0.00 38.45 2.52
61 62 2.764547 AGGCTAGGCGGAGGGAAC 60.765 66.667 11.10 0.00 0.00 3.62
62 63 2.444140 GAGGCTAGGCGGAGGGAA 60.444 66.667 11.10 0.00 0.00 3.97
63 64 4.541648 GGAGGCTAGGCGGAGGGA 62.542 72.222 11.10 0.00 0.00 4.20
64 65 4.860881 TGGAGGCTAGGCGGAGGG 62.861 72.222 11.10 0.00 0.00 4.30
65 66 2.525381 ATGGAGGCTAGGCGGAGG 60.525 66.667 11.10 0.00 0.00 4.30
66 67 2.578714 GGATGGAGGCTAGGCGGAG 61.579 68.421 11.10 0.00 0.00 4.63
67 68 2.524394 GGATGGAGGCTAGGCGGA 60.524 66.667 11.10 0.00 0.00 5.54
68 69 3.631046 GGGATGGAGGCTAGGCGG 61.631 72.222 11.10 0.00 0.00 6.13
69 70 3.996124 CGGGATGGAGGCTAGGCG 61.996 72.222 11.10 0.00 0.00 5.52
70 71 2.524394 TCGGGATGGAGGCTAGGC 60.524 66.667 8.55 8.55 0.00 3.93
71 72 2.565645 CGTCGGGATGGAGGCTAGG 61.566 68.421 0.00 0.00 0.00 3.02
72 73 0.896019 ATCGTCGGGATGGAGGCTAG 60.896 60.000 0.00 0.00 32.92 3.42
73 74 1.153061 ATCGTCGGGATGGAGGCTA 59.847 57.895 0.00 0.00 32.92 3.93
74 75 2.123251 ATCGTCGGGATGGAGGCT 60.123 61.111 0.00 0.00 32.92 4.58
81 82 0.811616 GCTTGAAGCATCGTCGGGAT 60.812 55.000 13.09 0.00 41.89 3.85
82 83 1.447838 GCTTGAAGCATCGTCGGGA 60.448 57.895 13.09 0.00 41.89 5.14
83 84 2.802667 CGCTTGAAGCATCGTCGGG 61.803 63.158 18.22 0.00 42.58 5.14
84 85 2.014093 GACGCTTGAAGCATCGTCGG 62.014 60.000 18.22 1.13 42.58 4.79
85 86 1.341802 GACGCTTGAAGCATCGTCG 59.658 57.895 18.22 1.89 42.58 5.12
89 90 1.071019 TCGACGACGCTTGAAGCATC 61.071 55.000 18.22 10.87 42.58 3.91
90 91 0.666274 TTCGACGACGCTTGAAGCAT 60.666 50.000 18.22 0.20 42.58 3.79
91 92 1.275471 CTTCGACGACGCTTGAAGCA 61.275 55.000 18.22 0.00 42.58 3.91
92 93 1.412606 CTTCGACGACGCTTGAAGC 59.587 57.895 7.20 7.20 39.58 3.86
93 94 1.344942 CCCTTCGACGACGCTTGAAG 61.345 60.000 14.08 14.08 39.58 3.02
94 95 1.372499 CCCTTCGACGACGCTTGAA 60.372 57.895 1.48 0.00 39.58 2.69
95 96 2.257371 CCCTTCGACGACGCTTGA 59.743 61.111 1.48 0.00 39.58 3.02
96 97 3.479269 GCCCTTCGACGACGCTTG 61.479 66.667 1.48 0.00 39.58 4.01
100 101 4.695231 ACACGCCCTTCGACGACG 62.695 66.667 0.00 0.00 41.67 5.12
101 102 3.103911 CACACGCCCTTCGACGAC 61.104 66.667 0.00 0.00 41.67 4.34
102 103 4.351938 CCACACGCCCTTCGACGA 62.352 66.667 0.00 0.00 41.67 4.20
103 104 4.351938 TCCACACGCCCTTCGACG 62.352 66.667 0.00 0.00 41.67 5.12
104 105 2.432628 CTCCACACGCCCTTCGAC 60.433 66.667 0.00 0.00 41.67 4.20
105 106 3.691342 CCTCCACACGCCCTTCGA 61.691 66.667 0.00 0.00 41.67 3.71
106 107 4.003788 ACCTCCACACGCCCTTCG 62.004 66.667 0.00 0.00 45.38 3.79
107 108 2.358737 CACCTCCACACGCCCTTC 60.359 66.667 0.00 0.00 0.00 3.46
108 109 3.168528 ACACCTCCACACGCCCTT 61.169 61.111 0.00 0.00 0.00 3.95
109 110 3.941188 CACACCTCCACACGCCCT 61.941 66.667 0.00 0.00 0.00 5.19
110 111 2.180159 ATACACACCTCCACACGCCC 62.180 60.000 0.00 0.00 0.00 6.13
111 112 0.739813 GATACACACCTCCACACGCC 60.740 60.000 0.00 0.00 0.00 5.68
112 113 0.246635 AGATACACACCTCCACACGC 59.753 55.000 0.00 0.00 0.00 5.34
113 114 1.404181 CCAGATACACACCTCCACACG 60.404 57.143 0.00 0.00 0.00 4.49
114 115 1.676014 GCCAGATACACACCTCCACAC 60.676 57.143 0.00 0.00 0.00 3.82
115 116 0.613260 GCCAGATACACACCTCCACA 59.387 55.000 0.00 0.00 0.00 4.17
116 117 0.613260 TGCCAGATACACACCTCCAC 59.387 55.000 0.00 0.00 0.00 4.02
117 118 0.904649 CTGCCAGATACACACCTCCA 59.095 55.000 0.00 0.00 0.00 3.86
118 119 1.195115 TCTGCCAGATACACACCTCC 58.805 55.000 0.00 0.00 0.00 4.30
119 120 2.697751 AGATCTGCCAGATACACACCTC 59.302 50.000 7.30 0.00 34.53 3.85
120 121 2.697751 GAGATCTGCCAGATACACACCT 59.302 50.000 7.30 0.00 34.53 4.00
121 122 2.544694 CGAGATCTGCCAGATACACACC 60.545 54.545 7.30 0.00 34.53 4.16
122 123 2.099921 ACGAGATCTGCCAGATACACAC 59.900 50.000 7.30 0.00 34.53 3.82
123 124 2.379005 ACGAGATCTGCCAGATACACA 58.621 47.619 7.30 0.00 34.53 3.72
124 125 3.057876 CCTACGAGATCTGCCAGATACAC 60.058 52.174 7.30 1.57 34.53 2.90
125 126 3.149981 CCTACGAGATCTGCCAGATACA 58.850 50.000 7.30 0.00 34.53 2.29
126 127 3.413327 TCCTACGAGATCTGCCAGATAC 58.587 50.000 7.30 4.39 34.53 2.24
127 128 3.790089 TCCTACGAGATCTGCCAGATA 57.210 47.619 7.30 0.00 34.53 1.98
128 129 2.666272 TCCTACGAGATCTGCCAGAT 57.334 50.000 6.98 6.98 37.73 2.90
129 130 2.666272 ATCCTACGAGATCTGCCAGA 57.334 50.000 0.00 0.00 0.00 3.86
130 131 2.351253 CGAATCCTACGAGATCTGCCAG 60.351 54.545 0.00 0.00 0.00 4.85
131 132 1.609072 CGAATCCTACGAGATCTGCCA 59.391 52.381 0.00 0.00 0.00 4.92
132 133 1.068194 CCGAATCCTACGAGATCTGCC 60.068 57.143 0.00 0.00 0.00 4.85
133 134 1.609555 ACCGAATCCTACGAGATCTGC 59.390 52.381 0.00 0.00 0.00 4.26
134 135 2.096169 CGACCGAATCCTACGAGATCTG 60.096 54.545 0.00 0.00 0.00 2.90
135 136 2.144730 CGACCGAATCCTACGAGATCT 58.855 52.381 0.00 0.00 0.00 2.75
136 137 1.197264 CCGACCGAATCCTACGAGATC 59.803 57.143 0.00 0.00 0.00 2.75
137 138 1.236628 CCGACCGAATCCTACGAGAT 58.763 55.000 0.00 0.00 0.00 2.75
138 139 1.442526 GCCGACCGAATCCTACGAGA 61.443 60.000 0.00 0.00 0.00 4.04
139 140 1.008767 GCCGACCGAATCCTACGAG 60.009 63.158 0.00 0.00 0.00 4.18
140 141 2.827051 CGCCGACCGAATCCTACGA 61.827 63.158 0.00 0.00 40.02 3.43
141 142 2.353145 CGCCGACCGAATCCTACG 60.353 66.667 0.00 0.00 40.02 3.51
142 143 0.459063 AAACGCCGACCGAATCCTAC 60.459 55.000 0.00 0.00 41.02 3.18
143 144 0.179129 GAAACGCCGACCGAATCCTA 60.179 55.000 0.00 0.00 41.02 2.94
144 145 1.447314 GAAACGCCGACCGAATCCT 60.447 57.895 0.00 0.00 41.02 3.24
145 146 1.419107 GAGAAACGCCGACCGAATCC 61.419 60.000 0.00 0.00 41.02 3.01
146 147 0.458025 AGAGAAACGCCGACCGAATC 60.458 55.000 0.00 1.14 41.02 2.52
147 148 0.037605 AAGAGAAACGCCGACCGAAT 60.038 50.000 0.00 0.00 41.02 3.34
148 149 0.942410 CAAGAGAAACGCCGACCGAA 60.942 55.000 0.00 0.00 41.02 4.30
149 150 1.372499 CAAGAGAAACGCCGACCGA 60.372 57.895 0.00 0.00 41.02 4.69
150 151 2.380410 CCAAGAGAAACGCCGACCG 61.380 63.158 0.00 0.00 44.21 4.79
151 152 1.301479 ACCAAGAGAAACGCCGACC 60.301 57.895 0.00 0.00 0.00 4.79
152 153 1.566018 CCACCAAGAGAAACGCCGAC 61.566 60.000 0.00 0.00 0.00 4.79
153 154 1.301401 CCACCAAGAGAAACGCCGA 60.301 57.895 0.00 0.00 0.00 5.54
154 155 0.673644 ATCCACCAAGAGAAACGCCG 60.674 55.000 0.00 0.00 0.00 6.46
155 156 1.087501 GATCCACCAAGAGAAACGCC 58.912 55.000 0.00 0.00 0.00 5.68
156 157 1.087501 GGATCCACCAAGAGAAACGC 58.912 55.000 6.95 0.00 38.79 4.84
157 158 1.359848 CGGATCCACCAAGAGAAACG 58.640 55.000 13.41 0.00 38.90 3.60
158 159 1.003233 ACCGGATCCACCAAGAGAAAC 59.997 52.381 9.46 0.00 38.90 2.78
159 160 1.278127 GACCGGATCCACCAAGAGAAA 59.722 52.381 9.46 0.00 38.90 2.52
160 161 0.902531 GACCGGATCCACCAAGAGAA 59.097 55.000 9.46 0.00 38.90 2.87
161 162 0.041238 AGACCGGATCCACCAAGAGA 59.959 55.000 9.46 0.00 38.90 3.10
162 163 0.905357 AAGACCGGATCCACCAAGAG 59.095 55.000 9.46 0.00 38.90 2.85
163 164 0.902531 GAAGACCGGATCCACCAAGA 59.097 55.000 9.46 0.00 38.90 3.02
164 165 0.460284 CGAAGACCGGATCCACCAAG 60.460 60.000 9.46 0.00 38.90 3.61
165 166 1.189524 ACGAAGACCGGATCCACCAA 61.190 55.000 9.46 0.00 43.93 3.67
166 167 1.189524 AACGAAGACCGGATCCACCA 61.190 55.000 9.46 0.00 43.93 4.17
167 168 0.459759 GAACGAAGACCGGATCCACC 60.460 60.000 9.46 0.00 43.93 4.61
168 169 0.245539 TGAACGAAGACCGGATCCAC 59.754 55.000 9.46 2.42 43.93 4.02
169 170 1.136305 GATGAACGAAGACCGGATCCA 59.864 52.381 9.46 0.00 43.93 3.41
170 171 1.409427 AGATGAACGAAGACCGGATCC 59.591 52.381 9.46 0.00 43.93 3.36
171 172 2.873133 AGATGAACGAAGACCGGATC 57.127 50.000 9.46 1.42 43.93 3.36
172 173 3.021695 TGTAGATGAACGAAGACCGGAT 58.978 45.455 9.46 0.00 43.93 4.18
173 174 2.439409 TGTAGATGAACGAAGACCGGA 58.561 47.619 9.46 0.00 43.93 5.14
174 175 2.933495 TGTAGATGAACGAAGACCGG 57.067 50.000 0.00 0.00 43.93 5.28
175 176 4.492570 GCAAATGTAGATGAACGAAGACCG 60.493 45.833 0.00 0.00 45.44 4.79
176 177 4.492570 CGCAAATGTAGATGAACGAAGACC 60.493 45.833 0.00 0.00 0.00 3.85
177 178 4.091509 ACGCAAATGTAGATGAACGAAGAC 59.908 41.667 0.00 0.00 0.00 3.01
178 179 4.091365 CACGCAAATGTAGATGAACGAAGA 59.909 41.667 0.00 0.00 0.00 2.87
179 180 4.143115 ACACGCAAATGTAGATGAACGAAG 60.143 41.667 0.00 0.00 0.00 3.79
180 181 3.743911 ACACGCAAATGTAGATGAACGAA 59.256 39.130 0.00 0.00 0.00 3.85
181 182 3.322369 ACACGCAAATGTAGATGAACGA 58.678 40.909 0.00 0.00 0.00 3.85
182 183 3.367932 AGACACGCAAATGTAGATGAACG 59.632 43.478 0.00 0.00 31.24 3.95
183 184 4.641954 CAGACACGCAAATGTAGATGAAC 58.358 43.478 0.00 0.00 31.24 3.18
184 185 3.125146 GCAGACACGCAAATGTAGATGAA 59.875 43.478 0.00 0.00 31.24 2.57
185 186 2.672874 GCAGACACGCAAATGTAGATGA 59.327 45.455 0.00 0.00 31.24 2.92
186 187 2.416202 TGCAGACACGCAAATGTAGATG 59.584 45.455 0.00 0.00 39.45 2.90
187 188 2.674852 CTGCAGACACGCAAATGTAGAT 59.325 45.455 8.42 0.00 42.45 1.98
188 189 2.068519 CTGCAGACACGCAAATGTAGA 58.931 47.619 8.42 0.00 42.45 2.59
189 190 1.129251 CCTGCAGACACGCAAATGTAG 59.871 52.381 17.39 0.00 42.45 2.74
190 191 1.155889 CCTGCAGACACGCAAATGTA 58.844 50.000 17.39 0.00 42.45 2.29
191 192 0.819259 ACCTGCAGACACGCAAATGT 60.819 50.000 17.39 0.00 42.45 2.71
192 193 0.311790 AACCTGCAGACACGCAAATG 59.688 50.000 17.39 0.00 42.45 2.32
193 194 0.311790 CAACCTGCAGACACGCAAAT 59.688 50.000 17.39 0.00 42.45 2.32
194 195 1.723608 CCAACCTGCAGACACGCAAA 61.724 55.000 17.39 0.00 42.45 3.68
195 196 2.186160 CCAACCTGCAGACACGCAA 61.186 57.895 17.39 0.00 42.45 4.85
196 197 2.395988 ATCCAACCTGCAGACACGCA 62.396 55.000 17.39 0.00 40.32 5.24
197 198 1.639298 GATCCAACCTGCAGACACGC 61.639 60.000 17.39 0.00 0.00 5.34
198 199 1.021390 GGATCCAACCTGCAGACACG 61.021 60.000 17.39 0.00 0.00 4.49
199 200 0.326264 AGGATCCAACCTGCAGACAC 59.674 55.000 17.39 0.00 39.01 3.67
200 201 1.003580 GAAGGATCCAACCTGCAGACA 59.996 52.381 17.39 0.00 40.49 3.41
201 202 1.680249 GGAAGGATCCAACCTGCAGAC 60.680 57.143 17.39 0.00 45.79 3.51
202 203 0.620556 GGAAGGATCCAACCTGCAGA 59.379 55.000 17.39 0.00 45.79 4.26
203 204 0.745845 CGGAAGGATCCAACCTGCAG 60.746 60.000 15.82 6.78 46.97 4.41
204 205 1.198094 TCGGAAGGATCCAACCTGCA 61.198 55.000 15.82 1.01 46.97 4.41
205 206 0.181350 ATCGGAAGGATCCAACCTGC 59.819 55.000 15.82 0.00 46.97 4.85
206 207 2.246719 GATCGGAAGGATCCAACCTG 57.753 55.000 15.82 12.25 46.97 4.00
214 215 2.554893 GAGAAGCGTAGATCGGAAGGAT 59.445 50.000 0.00 0.00 40.26 3.24
215 216 1.948145 GAGAAGCGTAGATCGGAAGGA 59.052 52.381 0.00 0.00 40.26 3.36
216 217 1.950909 AGAGAAGCGTAGATCGGAAGG 59.049 52.381 0.00 0.00 40.26 3.46
217 218 2.349060 CGAGAGAAGCGTAGATCGGAAG 60.349 54.545 0.00 0.00 40.26 3.46
218 219 1.598132 CGAGAGAAGCGTAGATCGGAA 59.402 52.381 0.00 0.00 40.26 4.30
219 220 1.218763 CGAGAGAAGCGTAGATCGGA 58.781 55.000 0.00 0.00 40.26 4.55
220 221 0.236187 CCGAGAGAAGCGTAGATCGG 59.764 60.000 8.02 8.02 43.09 4.18
221 222 0.384974 GCCGAGAGAAGCGTAGATCG 60.385 60.000 0.00 0.00 43.12 3.69
222 223 3.465307 GCCGAGAGAAGCGTAGATC 57.535 57.895 0.00 0.00 0.00 2.75
229 230 1.080434 AACTGTCGCCGAGAGAAGC 60.080 57.895 18.86 0.00 0.00 3.86
230 231 0.039074 ACAACTGTCGCCGAGAGAAG 60.039 55.000 18.86 11.58 0.00 2.85
231 232 0.387929 AACAACTGTCGCCGAGAGAA 59.612 50.000 18.86 0.00 0.00 2.87
232 233 1.241165 TAACAACTGTCGCCGAGAGA 58.759 50.000 18.86 0.00 0.00 3.10
233 234 2.279582 ATAACAACTGTCGCCGAGAG 57.720 50.000 9.99 9.99 0.00 3.20
234 235 2.230508 AGAATAACAACTGTCGCCGAGA 59.769 45.455 0.00 0.00 0.00 4.04
235 236 2.345641 CAGAATAACAACTGTCGCCGAG 59.654 50.000 0.00 0.00 0.00 4.63
236 237 2.333926 CAGAATAACAACTGTCGCCGA 58.666 47.619 0.00 0.00 0.00 5.54
237 238 1.393539 CCAGAATAACAACTGTCGCCG 59.606 52.381 0.00 0.00 32.93 6.46
238 239 2.159627 CACCAGAATAACAACTGTCGCC 59.840 50.000 0.00 0.00 32.93 5.54
239 240 2.412847 GCACCAGAATAACAACTGTCGC 60.413 50.000 0.00 0.00 32.93 5.19
240 241 2.159841 CGCACCAGAATAACAACTGTCG 60.160 50.000 0.00 0.00 32.93 4.35
241 242 2.806244 ACGCACCAGAATAACAACTGTC 59.194 45.455 0.00 0.00 32.93 3.51
242 243 2.846193 ACGCACCAGAATAACAACTGT 58.154 42.857 0.00 0.00 32.93 3.55
243 244 3.554524 CAACGCACCAGAATAACAACTG 58.445 45.455 0.00 0.00 0.00 3.16
244 245 2.552315 CCAACGCACCAGAATAACAACT 59.448 45.455 0.00 0.00 0.00 3.16
245 246 2.292292 ACCAACGCACCAGAATAACAAC 59.708 45.455 0.00 0.00 0.00 3.32
246 247 2.550606 GACCAACGCACCAGAATAACAA 59.449 45.455 0.00 0.00 0.00 2.83
247 248 2.147958 GACCAACGCACCAGAATAACA 58.852 47.619 0.00 0.00 0.00 2.41
248 249 1.127951 CGACCAACGCACCAGAATAAC 59.872 52.381 0.00 0.00 34.51 1.89
249 250 1.270412 ACGACCAACGCACCAGAATAA 60.270 47.619 0.00 0.00 46.94 1.40
250 251 0.319083 ACGACCAACGCACCAGAATA 59.681 50.000 0.00 0.00 46.94 1.75
251 252 0.319083 TACGACCAACGCACCAGAAT 59.681 50.000 0.00 0.00 46.94 2.40
252 253 0.319083 ATACGACCAACGCACCAGAA 59.681 50.000 0.00 0.00 46.94 3.02
253 254 0.389296 CATACGACCAACGCACCAGA 60.389 55.000 0.00 0.00 46.94 3.86
254 255 1.358725 CCATACGACCAACGCACCAG 61.359 60.000 0.00 0.00 46.94 4.00
255 256 1.374885 CCATACGACCAACGCACCA 60.375 57.895 0.00 0.00 46.94 4.17
256 257 2.104253 CCCATACGACCAACGCACC 61.104 63.158 0.00 0.00 46.94 5.01
257 258 2.104253 CCCCATACGACCAACGCAC 61.104 63.158 0.00 0.00 46.94 5.34
258 259 2.266372 CCCCATACGACCAACGCA 59.734 61.111 0.00 0.00 46.94 5.24
259 260 1.812507 GACCCCATACGACCAACGC 60.813 63.158 0.00 0.00 46.94 4.84
261 262 2.740904 GCTAAGACCCCATACGACCAAC 60.741 54.545 0.00 0.00 0.00 3.77
262 263 1.483415 GCTAAGACCCCATACGACCAA 59.517 52.381 0.00 0.00 0.00 3.67
263 264 1.117150 GCTAAGACCCCATACGACCA 58.883 55.000 0.00 0.00 0.00 4.02
264 265 1.117150 TGCTAAGACCCCATACGACC 58.883 55.000 0.00 0.00 0.00 4.79
265 266 1.535437 CGTGCTAAGACCCCATACGAC 60.535 57.143 0.00 0.00 32.36 4.34
266 267 0.742505 CGTGCTAAGACCCCATACGA 59.257 55.000 0.00 0.00 32.36 3.43
267 268 0.249322 CCGTGCTAAGACCCCATACG 60.249 60.000 0.00 0.00 0.00 3.06
268 269 0.532196 GCCGTGCTAAGACCCCATAC 60.532 60.000 0.00 0.00 0.00 2.39
269 270 1.827394 GCCGTGCTAAGACCCCATA 59.173 57.895 0.00 0.00 0.00 2.74
270 271 2.590092 GCCGTGCTAAGACCCCAT 59.410 61.111 0.00 0.00 0.00 4.00
271 272 4.077184 CGCCGTGCTAAGACCCCA 62.077 66.667 0.00 0.00 0.00 4.96
272 273 3.766691 TCGCCGTGCTAAGACCCC 61.767 66.667 0.00 0.00 0.00 4.95
273 274 2.508663 GTCGCCGTGCTAAGACCC 60.509 66.667 0.00 0.00 0.00 4.46
274 275 1.805945 CAGTCGCCGTGCTAAGACC 60.806 63.158 0.00 0.00 34.41 3.85
275 276 2.445438 GCAGTCGCCGTGCTAAGAC 61.445 63.158 0.00 0.00 37.96 3.01
276 277 2.126071 GCAGTCGCCGTGCTAAGA 60.126 61.111 0.00 0.00 37.96 2.10
286 287 2.697761 TAGACAGTCGGGCAGTCGC 61.698 63.158 0.00 0.00 38.46 5.19
287 288 1.136984 GTAGACAGTCGGGCAGTCG 59.863 63.158 0.00 0.00 38.46 4.18
288 289 1.401199 GTAGTAGACAGTCGGGCAGTC 59.599 57.143 0.00 0.00 34.30 3.51
289 290 1.271762 TGTAGTAGACAGTCGGGCAGT 60.272 52.381 0.00 0.00 32.86 4.40
290 291 1.460504 TGTAGTAGACAGTCGGGCAG 58.539 55.000 0.00 0.00 32.86 4.85
291 292 1.542915 GTTGTAGTAGACAGTCGGGCA 59.457 52.381 0.00 0.00 39.88 5.36
292 293 1.542915 TGTTGTAGTAGACAGTCGGGC 59.457 52.381 0.00 0.00 39.88 6.13
293 294 3.928727 TTGTTGTAGTAGACAGTCGGG 57.071 47.619 0.00 0.00 39.88 5.14
578 579 0.168348 TACAAGCACGAGAGCGAGTC 59.832 55.000 0.00 0.00 41.64 3.36
579 580 0.169230 CTACAAGCACGAGAGCGAGT 59.831 55.000 0.00 0.00 41.64 4.18
580 581 0.169230 ACTACAAGCACGAGAGCGAG 59.831 55.000 0.00 0.00 41.64 5.03
587 588 1.441515 GCGACGACTACAAGCACGA 60.442 57.895 0.00 0.00 0.00 4.35
588 589 0.179207 TAGCGACGACTACAAGCACG 60.179 55.000 0.00 0.00 0.00 5.34
595 596 0.807496 AACCACCTAGCGACGACTAC 59.193 55.000 0.00 0.00 0.00 2.73
620 624 7.057149 ACACGAGAAGTAAAATTTACATCCG 57.943 36.000 17.00 18.65 0.00 4.18
654 658 7.350467 CAATCTATTCATCAATCGTCAAGGTG 58.650 38.462 0.00 0.00 0.00 4.00
663 667 9.798994 AGAAAACTTGCAATCTATTCATCAATC 57.201 29.630 0.00 0.00 0.00 2.67
664 668 9.798994 GAGAAAACTTGCAATCTATTCATCAAT 57.201 29.630 0.00 0.00 0.00 2.57
680 684 5.508124 TGTTGTTTTTGCGAGAAAACTTG 57.492 34.783 20.23 0.00 45.32 3.16
706 710 8.739039 TGAAACAGTAGATTATTTGGAATGTGG 58.261 33.333 0.00 0.00 0.00 4.17
724 728 8.062065 TGGTTTTGAAGAACTTATGAAACAGT 57.938 30.769 15.02 0.00 0.00 3.55
822 832 4.374702 GTGCACAGCGCTCCAACG 62.375 66.667 7.13 0.00 43.06 4.10
957 967 0.039035 AGCTTGAGAGGAGGAGACGT 59.961 55.000 0.00 0.00 0.00 4.34
1593 1603 0.037975 CCTCAAACAATGCCACAGCC 60.038 55.000 0.00 0.00 38.69 4.85
1646 1656 2.349590 TGATGACATTGAAGCTCCACG 58.650 47.619 0.00 0.00 0.00 4.94
1663 1673 2.181975 CTTGCAAACCCCCTTGATGAT 58.818 47.619 0.00 0.00 0.00 2.45
1701 1711 3.362797 TCGACCAACTCGAGCGCT 61.363 61.111 11.27 11.27 46.75 5.92
1743 1753 8.928448 AGAATATTATGTGTGACAGTATCTGGT 58.072 33.333 0.00 0.00 35.51 4.00
2018 2028 0.462581 CTGATACACTGCCACCGCAT 60.463 55.000 0.00 0.00 46.11 4.73
2440 2450 8.732531 CATTTTATGGAAAAATGTGATGGCTTT 58.267 29.630 12.76 0.00 40.73 3.51
2813 2823 7.596749 ACGAGTTTGTATGGAAATAGTTCAG 57.403 36.000 5.15 0.00 35.25 3.02
2836 2846 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
2837 2847 0.251742 TTTTCCGGACGGAGGGAGTA 60.252 55.000 13.64 0.00 46.06 2.59
2838 2848 1.534717 TTTTCCGGACGGAGGGAGT 60.535 57.895 13.64 0.00 46.06 3.85
2839 2849 1.218316 CTTTTCCGGACGGAGGGAG 59.782 63.158 13.64 9.15 46.06 4.30
2840 2850 2.951101 GCTTTTCCGGACGGAGGGA 61.951 63.158 13.64 1.83 46.06 4.20
2841 2851 2.436115 GCTTTTCCGGACGGAGGG 60.436 66.667 13.64 8.97 46.06 4.30
2842 2852 1.003718 AAGCTTTTCCGGACGGAGG 60.004 57.895 13.64 9.30 46.06 4.30
2843 2853 0.602905 ACAAGCTTTTCCGGACGGAG 60.603 55.000 13.64 3.27 46.06 4.63
2844 2854 0.601841 GACAAGCTTTTCCGGACGGA 60.602 55.000 1.83 9.76 43.52 4.69
2845 2855 1.574702 GGACAAGCTTTTCCGGACGG 61.575 60.000 15.65 3.96 0.00 4.79
2846 2856 1.574702 GGGACAAGCTTTTCCGGACG 61.575 60.000 22.30 0.00 32.00 4.79
2847 2857 0.250770 AGGGACAAGCTTTTCCGGAC 60.251 55.000 22.30 11.02 32.00 4.79
2848 2858 0.036306 GAGGGACAAGCTTTTCCGGA 59.964 55.000 22.30 0.00 32.00 5.14
2849 2859 0.250727 TGAGGGACAAGCTTTTCCGG 60.251 55.000 22.30 0.00 32.00 5.14
2850 2860 1.604604 TTGAGGGACAAGCTTTTCCG 58.395 50.000 22.30 2.85 34.20 4.30
2851 2861 3.573967 TCATTTGAGGGACAAGCTTTTCC 59.426 43.478 21.34 21.34 39.77 3.13
2852 2862 4.853924 TCATTTGAGGGACAAGCTTTTC 57.146 40.909 3.91 3.91 39.77 2.29
2853 2863 5.070847 ACATTCATTTGAGGGACAAGCTTTT 59.929 36.000 0.00 0.00 39.77 2.27
2854 2864 4.590222 ACATTCATTTGAGGGACAAGCTTT 59.410 37.500 0.00 0.00 39.77 3.51
2855 2865 4.154942 ACATTCATTTGAGGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
2856 2866 3.771216 ACATTCATTTGAGGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
2857 2867 5.591877 AGATACATTCATTTGAGGGACAAGC 59.408 40.000 0.00 0.00 39.77 4.01
2858 2868 7.041508 GCTAGATACATTCATTTGAGGGACAAG 60.042 40.741 0.00 0.00 39.77 3.16
2859 2869 6.767902 GCTAGATACATTCATTTGAGGGACAA 59.232 38.462 0.00 0.00 36.65 3.18
2860 2870 6.126796 TGCTAGATACATTCATTTGAGGGACA 60.127 38.462 0.00 0.00 0.00 4.02
2861 2871 6.203723 GTGCTAGATACATTCATTTGAGGGAC 59.796 42.308 0.00 0.00 0.00 4.46
2862 2872 6.291377 GTGCTAGATACATTCATTTGAGGGA 58.709 40.000 0.00 0.00 0.00 4.20
2863 2873 5.471456 GGTGCTAGATACATTCATTTGAGGG 59.529 44.000 0.00 0.00 0.00 4.30
2864 2874 6.057533 TGGTGCTAGATACATTCATTTGAGG 58.942 40.000 0.00 0.00 0.00 3.86
2865 2875 7.281774 ACTTGGTGCTAGATACATTCATTTGAG 59.718 37.037 0.00 0.00 0.00 3.02
2866 2876 7.112122 ACTTGGTGCTAGATACATTCATTTGA 58.888 34.615 0.00 0.00 0.00 2.69
2867 2877 7.325660 ACTTGGTGCTAGATACATTCATTTG 57.674 36.000 0.00 0.00 0.00 2.32
2868 2878 7.944729 AACTTGGTGCTAGATACATTCATTT 57.055 32.000 0.00 0.00 0.00 2.32
2869 2879 8.267894 ACTAACTTGGTGCTAGATACATTCATT 58.732 33.333 0.00 0.00 0.00 2.57
2870 2880 7.712639 CACTAACTTGGTGCTAGATACATTCAT 59.287 37.037 0.00 0.00 0.00 2.57
2871 2881 7.041721 CACTAACTTGGTGCTAGATACATTCA 58.958 38.462 0.00 0.00 0.00 2.57
2872 2882 7.470289 CACTAACTTGGTGCTAGATACATTC 57.530 40.000 0.00 0.00 0.00 2.67
2884 2894 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
2885 2895 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
2886 2896 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
2887 2897 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
2888 2898 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
2889 2899 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
2890 2900 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
2891 2901 7.290014 TCCTCAAATGGATGTATCTAGCACTAA 59.710 37.037 0.00 0.00 0.00 2.24
2892 2902 6.782494 TCCTCAAATGGATGTATCTAGCACTA 59.218 38.462 0.00 0.00 0.00 2.74
2893 2903 5.604231 TCCTCAAATGGATGTATCTAGCACT 59.396 40.000 0.00 0.00 0.00 4.40
2894 2904 5.858381 TCCTCAAATGGATGTATCTAGCAC 58.142 41.667 0.00 0.00 0.00 4.40
2895 2905 6.126796 TGTTCCTCAAATGGATGTATCTAGCA 60.127 38.462 0.00 0.00 35.83 3.49
2896 2906 6.291377 TGTTCCTCAAATGGATGTATCTAGC 58.709 40.000 0.00 0.00 35.83 3.42
2897 2907 7.041508 GCTTGTTCCTCAAATGGATGTATCTAG 60.042 40.741 0.00 0.00 35.83 2.43
2898 2908 6.767902 GCTTGTTCCTCAAATGGATGTATCTA 59.232 38.462 0.00 0.00 35.83 1.98
2899 2909 5.591877 GCTTGTTCCTCAAATGGATGTATCT 59.408 40.000 0.00 0.00 35.83 1.98
2900 2910 5.591877 AGCTTGTTCCTCAAATGGATGTATC 59.408 40.000 0.00 0.00 35.83 2.24
2901 2911 5.513233 AGCTTGTTCCTCAAATGGATGTAT 58.487 37.500 0.00 0.00 35.83 2.29
2902 2912 4.922206 AGCTTGTTCCTCAAATGGATGTA 58.078 39.130 0.00 0.00 35.83 2.29
2903 2913 3.771216 AGCTTGTTCCTCAAATGGATGT 58.229 40.909 0.00 0.00 35.83 3.06
2904 2914 4.491676 CAAGCTTGTTCCTCAAATGGATG 58.508 43.478 18.65 0.00 35.83 3.51
2905 2915 3.512724 CCAAGCTTGTTCCTCAAATGGAT 59.487 43.478 24.35 0.00 36.92 3.41
2906 2916 2.892852 CCAAGCTTGTTCCTCAAATGGA 59.107 45.455 24.35 0.00 36.92 3.41
2907 2917 2.028748 CCCAAGCTTGTTCCTCAAATGG 60.029 50.000 24.35 10.71 35.48 3.16
2908 2918 2.892852 TCCCAAGCTTGTTCCTCAAATG 59.107 45.455 24.35 5.47 35.48 2.32
2909 2919 2.893489 GTCCCAAGCTTGTTCCTCAAAT 59.107 45.455 24.35 0.00 35.48 2.32
2910 2920 2.306847 GTCCCAAGCTTGTTCCTCAAA 58.693 47.619 24.35 0.00 35.48 2.69
2911 2921 1.214175 TGTCCCAAGCTTGTTCCTCAA 59.786 47.619 24.35 1.41 34.61 3.02
2912 2922 0.843309 TGTCCCAAGCTTGTTCCTCA 59.157 50.000 24.35 12.85 0.00 3.86
2913 2923 1.882623 CTTGTCCCAAGCTTGTTCCTC 59.117 52.381 24.35 10.65 0.00 3.71
2914 2924 1.986882 CTTGTCCCAAGCTTGTTCCT 58.013 50.000 24.35 0.00 0.00 3.36
2915 2925 0.315251 GCTTGTCCCAAGCTTGTTCC 59.685 55.000 24.35 11.81 40.01 3.62
2916 2926 3.873805 GCTTGTCCCAAGCTTGTTC 57.126 52.632 24.35 14.17 40.01 3.18
2922 2932 2.362077 TCTGAAAAAGCTTGTCCCAAGC 59.638 45.455 18.69 18.69 43.31 4.01
2923 2933 3.548818 CGTCTGAAAAAGCTTGTCCCAAG 60.549 47.826 0.00 0.00 0.00 3.61
2924 2934 2.357637 CGTCTGAAAAAGCTTGTCCCAA 59.642 45.455 0.00 0.00 0.00 4.12
2925 2935 1.946768 CGTCTGAAAAAGCTTGTCCCA 59.053 47.619 0.00 0.00 0.00 4.37
2926 2936 1.266989 CCGTCTGAAAAAGCTTGTCCC 59.733 52.381 0.00 0.00 0.00 4.46
2927 2937 2.218603 TCCGTCTGAAAAAGCTTGTCC 58.781 47.619 0.00 0.00 0.00 4.02
2928 2938 2.224314 CCTCCGTCTGAAAAAGCTTGTC 59.776 50.000 0.00 1.07 0.00 3.18
2929 2939 2.222027 CCTCCGTCTGAAAAAGCTTGT 58.778 47.619 0.00 0.00 0.00 3.16
2930 2940 1.537202 CCCTCCGTCTGAAAAAGCTTG 59.463 52.381 0.00 0.00 0.00 4.01
2931 2941 1.420138 TCCCTCCGTCTGAAAAAGCTT 59.580 47.619 0.00 0.00 0.00 3.74
2932 2942 1.002544 CTCCCTCCGTCTGAAAAAGCT 59.997 52.381 0.00 0.00 0.00 3.74
2933 2943 1.270893 ACTCCCTCCGTCTGAAAAAGC 60.271 52.381 0.00 0.00 0.00 3.51
2934 2944 2.841442 ACTCCCTCCGTCTGAAAAAG 57.159 50.000 0.00 0.00 0.00 2.27
2935 2945 5.482878 AGTTATACTCCCTCCGTCTGAAAAA 59.517 40.000 0.00 0.00 0.00 1.94
2936 2946 5.021458 AGTTATACTCCCTCCGTCTGAAAA 58.979 41.667 0.00 0.00 0.00 2.29
2937 2947 4.607239 AGTTATACTCCCTCCGTCTGAAA 58.393 43.478 0.00 0.00 0.00 2.69
2938 2948 4.246712 AGTTATACTCCCTCCGTCTGAA 57.753 45.455 0.00 0.00 0.00 3.02
2939 2949 3.947612 AGTTATACTCCCTCCGTCTGA 57.052 47.619 0.00 0.00 0.00 3.27
2940 2950 6.651975 ATTAAGTTATACTCCCTCCGTCTG 57.348 41.667 0.00 0.00 0.00 3.51
2941 2951 8.953223 ATTATTAAGTTATACTCCCTCCGTCT 57.047 34.615 0.00 0.00 0.00 4.18
3118 3128 4.021822 CGTGTGCAGTAAAATATTGCTCG 58.978 43.478 6.46 5.38 41.40 5.03
3228 3240 9.726232 ATTCAATCATGTTTCAATCGAATACAG 57.274 29.630 0.00 0.00 30.81 2.74
3555 3569 3.118629 TCATACATGAGGTGTTGAGGAGC 60.119 47.826 0.00 0.00 42.29 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.