Multiple sequence alignment - TraesCS2A01G312400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G312400 chr2A 100.000 2459 0 0 1 2459 537002402 537004860 0.000000e+00 4542.0
1 TraesCS2A01G312400 chr2D 91.394 1313 74 16 577 1878 399347198 399348482 0.000000e+00 1762.0
2 TraesCS2A01G312400 chr2D 84.513 226 27 4 1947 2165 316644283 316644059 1.480000e-52 217.0
3 TraesCS2A01G312400 chr2B 91.775 1228 85 13 379 1603 473299312 473300526 0.000000e+00 1694.0
4 TraesCS2A01G312400 chr2B 86.932 528 39 19 1658 2158 473300526 473301050 1.280000e-157 566.0
5 TraesCS2A01G312400 chr2B 82.692 312 35 18 2157 2459 403090844 403090543 2.430000e-65 259.0
6 TraesCS2A01G312400 chr1B 86.667 720 72 20 764 1477 434335170 434335871 0.000000e+00 776.0
7 TraesCS2A01G312400 chr1B 89.661 619 37 20 854 1461 344375777 344375175 0.000000e+00 763.0
8 TraesCS2A01G312400 chr1B 81.719 640 62 29 852 1460 621059192 621059807 1.320000e-132 483.0
9 TraesCS2A01G312400 chr4A 94.141 512 24 2 988 1493 23614515 23614004 0.000000e+00 774.0
10 TraesCS2A01G312400 chr4A 94.567 497 21 2 988 1478 23844021 23843525 0.000000e+00 763.0
11 TraesCS2A01G312400 chr1A 88.156 667 50 23 810 1461 344189976 344189324 0.000000e+00 767.0
12 TraesCS2A01G312400 chr1A 86.250 720 73 13 764 1461 400955320 400956035 0.000000e+00 758.0
13 TraesCS2A01G312400 chr4B 93.000 500 29 2 990 1483 553863762 553864261 0.000000e+00 725.0
14 TraesCS2A01G312400 chr4B 82.866 321 29 21 2157 2459 242718837 242718525 5.210000e-67 265.0
15 TraesCS2A01G312400 chr4B 79.808 312 42 20 2157 2459 28536161 28535862 8.910000e-50 207.0
16 TraesCS2A01G312400 chr4B 77.316 313 40 22 2157 2459 173299039 173298748 3.270000e-34 156.0
17 TraesCS2A01G312400 chr7D 95.238 378 18 0 1 378 500219522 500219145 1.260000e-167 599.0
18 TraesCS2A01G312400 chr7D 93.122 378 26 0 1 378 78425479 78425102 2.760000e-154 555.0
19 TraesCS2A01G312400 chr7D 92.287 376 29 0 2 377 535734594 535734219 3.600000e-148 534.0
20 TraesCS2A01G312400 chr7D 85.345 232 26 4 1941 2165 580766932 580767162 1.470000e-57 233.0
21 TraesCS2A01G312400 chr3A 94.180 378 22 0 1 378 509114974 509115351 5.900000e-161 577.0
22 TraesCS2A01G312400 chr3A 93.122 378 24 1 1 378 686813345 686812970 9.940000e-154 553.0
23 TraesCS2A01G312400 chr6D 93.915 378 23 0 1 378 413041233 413041610 2.740000e-159 571.0
24 TraesCS2A01G312400 chr6D 84.194 310 36 8 2157 2459 412197160 412196857 3.090000e-74 289.0
25 TraesCS2A01G312400 chr6D 84.477 277 29 13 2188 2459 144029559 144029826 6.740000e-66 261.0
26 TraesCS2A01G312400 chr6D 81.373 306 47 9 2157 2458 451322177 451322476 8.790000e-60 241.0
27 TraesCS2A01G312400 chr6D 81.457 302 43 10 2163 2459 19286496 19286203 4.090000e-58 235.0
28 TraesCS2A01G312400 chr6D 76.524 328 41 25 2157 2459 147894251 147894567 1.970000e-31 147.0
29 TraesCS2A01G312400 chr6D 81.152 191 23 13 2274 2459 285243675 285243493 9.170000e-30 141.0
30 TraesCS2A01G312400 chr6D 94.737 38 2 0 2422 2459 88827709 88827746 2.640000e-05 60.2
31 TraesCS2A01G312400 chr3B 93.915 378 23 0 1 378 670191790 670191413 2.740000e-159 571.0
32 TraesCS2A01G312400 chr5A 92.533 375 27 1 4 378 430988682 430988309 1.000000e-148 536.0
33 TraesCS2A01G312400 chr4D 92.063 378 30 0 1 378 83269275 83269652 1.290000e-147 532.0
34 TraesCS2A01G312400 chr4D 83.819 309 35 9 2157 2459 505004561 505004262 1.860000e-71 279.0
35 TraesCS2A01G312400 chr4D 82.201 309 38 16 2157 2459 69406067 69406364 1.460000e-62 250.0
36 TraesCS2A01G312400 chr6A 93.750 304 18 1 2156 2459 430580955 430580653 2.880000e-124 455.0
37 TraesCS2A01G312400 chr6A 84.295 312 33 10 2156 2459 609685648 609685951 8.600000e-75 291.0
38 TraesCS2A01G312400 chr7B 84.868 304 36 7 2160 2459 606833719 606833422 5.140000e-77 298.0
39 TraesCS2A01G312400 chr7B 84.395 314 33 15 2156 2459 517317044 517317351 6.650000e-76 294.0
40 TraesCS2A01G312400 chr7B 84.516 310 33 8 2159 2459 695881145 695880842 2.390000e-75 292.0
41 TraesCS2A01G312400 chr7B 83.621 232 30 4 1941 2165 648438420 648438650 6.890000e-51 211.0
42 TraesCS2A01G312400 chr7B 88.393 112 10 1 2015 2123 286771776 286771665 5.520000e-27 132.0
43 TraesCS2A01G312400 chr6B 82.663 323 30 21 2151 2459 708107768 708108078 1.880000e-66 263.0
44 TraesCS2A01G312400 chr6B 81.672 311 42 13 2157 2457 52338444 52338139 6.790000e-61 244.0
45 TraesCS2A01G312400 chr5D 82.748 313 36 15 2160 2459 421111906 421111599 1.880000e-66 263.0
46 TraesCS2A01G312400 chr5D 80.968 310 44 13 2157 2457 205372460 205372157 5.290000e-57 231.0
47 TraesCS2A01G312400 chr5D 86.335 161 13 8 2157 2314 368735477 368735631 1.510000e-37 167.0
48 TraesCS2A01G312400 chr1D 78.896 308 44 16 2157 2459 111980229 111979938 3.230000e-44 189.0
49 TraesCS2A01G312400 chrUn 76.849 311 45 20 2157 2459 17480287 17479996 1.520000e-32 150.0
50 TraesCS2A01G312400 chrUn 76.489 319 43 25 2147 2459 47880439 47880147 7.090000e-31 145.0
51 TraesCS2A01G312400 chrUn 81.921 177 25 5 2157 2330 87231386 87231214 2.550000e-30 143.0
52 TraesCS2A01G312400 chrUn 81.871 171 23 6 2157 2323 32325356 32325522 1.190000e-28 137.0
53 TraesCS2A01G312400 chrUn 80.702 171 15 16 2154 2317 241201221 241201380 1.540000e-22 117.0
54 TraesCS2A01G312400 chrUn 80.702 171 15 16 2154 2317 352791577 352791418 1.540000e-22 117.0
55 TraesCS2A01G312400 chrUn 88.506 87 8 2 2157 2241 410432297 410432211 1.200000e-18 104.0
56 TraesCS2A01G312400 chrUn 90.000 80 6 2 2156 2234 276925884 276925962 4.330000e-18 102.0
57 TraesCS2A01G312400 chrUn 79.394 165 16 14 2157 2315 717761 717609 1.560000e-17 100.0
58 TraesCS2A01G312400 chrUn 79.394 165 16 14 2157 2315 229409206 229409358 1.560000e-17 100.0
59 TraesCS2A01G312400 chrUn 79.518 166 11 17 2159 2317 39720899 39720750 2.010000e-16 97.1
60 TraesCS2A01G312400 chr7A 85.833 120 6 5 2009 2117 441112900 441112781 1.540000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G312400 chr2A 537002402 537004860 2458 False 4542 4542 100.0000 1 2459 1 chr2A.!!$F1 2458
1 TraesCS2A01G312400 chr2D 399347198 399348482 1284 False 1762 1762 91.3940 577 1878 1 chr2D.!!$F1 1301
2 TraesCS2A01G312400 chr2B 473299312 473301050 1738 False 1130 1694 89.3535 379 2158 2 chr2B.!!$F1 1779
3 TraesCS2A01G312400 chr1B 434335170 434335871 701 False 776 776 86.6670 764 1477 1 chr1B.!!$F1 713
4 TraesCS2A01G312400 chr1B 344375175 344375777 602 True 763 763 89.6610 854 1461 1 chr1B.!!$R1 607
5 TraesCS2A01G312400 chr1B 621059192 621059807 615 False 483 483 81.7190 852 1460 1 chr1B.!!$F2 608
6 TraesCS2A01G312400 chr4A 23614004 23614515 511 True 774 774 94.1410 988 1493 1 chr4A.!!$R1 505
7 TraesCS2A01G312400 chr1A 344189324 344189976 652 True 767 767 88.1560 810 1461 1 chr1A.!!$R1 651
8 TraesCS2A01G312400 chr1A 400955320 400956035 715 False 758 758 86.2500 764 1461 1 chr1A.!!$F1 697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
319 320 0.030908 CCGCACGGTTGGCTTAAAAA 59.969 50.0 0.0 0.0 0.0 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2315 2419 0.107848 GTAGGCGTGTGGGTGCTATT 60.108 55.0 0.0 0.0 0.0 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.265739 TCCAGATGCCAGTCGTGC 59.734 61.111 0.00 0.00 0.00 5.34
18 19 3.190849 CCAGATGCCAGTCGTGCG 61.191 66.667 0.00 0.00 0.00 5.34
19 20 3.190849 CAGATGCCAGTCGTGCGG 61.191 66.667 0.00 0.00 0.00 5.69
37 38 2.986290 CAGGGTCACGCCATGGTA 59.014 61.111 14.67 0.00 44.74 3.25
38 39 1.449601 CAGGGTCACGCCATGGTAC 60.450 63.158 14.67 6.85 44.74 3.34
39 40 2.510691 GGGTCACGCCATGGTACG 60.511 66.667 14.67 11.99 39.65 3.67
40 41 2.510691 GGTCACGCCATGGTACGG 60.511 66.667 14.67 3.17 37.17 4.02
41 42 3.192922 GTCACGCCATGGTACGGC 61.193 66.667 14.67 0.00 46.62 5.68
47 48 2.203070 CCATGGTACGGCAGAGGC 60.203 66.667 2.57 0.00 40.13 4.70
48 49 2.735772 CCATGGTACGGCAGAGGCT 61.736 63.158 2.57 0.00 40.87 4.58
83 84 4.320456 CACTCCGCCTGGTGCACT 62.320 66.667 17.98 0.00 41.33 4.40
84 85 4.320456 ACTCCGCCTGGTGCACTG 62.320 66.667 17.98 9.97 41.33 3.66
96 97 4.666532 GCACTGGCACGTTCACGC 62.667 66.667 0.00 0.00 44.43 5.34
97 98 4.354212 CACTGGCACGTTCACGCG 62.354 66.667 3.53 3.53 44.43 6.01
149 150 3.900888 AGGAACTCTGCGGGGAAA 58.099 55.556 0.00 0.00 0.00 3.13
150 151 1.679898 AGGAACTCTGCGGGGAAAG 59.320 57.895 0.00 0.00 0.00 2.62
151 152 1.377333 GGAACTCTGCGGGGAAAGG 60.377 63.158 0.00 0.00 0.00 3.11
152 153 1.377333 GAACTCTGCGGGGAAAGGG 60.377 63.158 0.00 0.00 0.00 3.95
153 154 2.821679 GAACTCTGCGGGGAAAGGGG 62.822 65.000 0.00 0.00 0.00 4.79
154 155 3.330720 CTCTGCGGGGAAAGGGGT 61.331 66.667 0.00 0.00 0.00 4.95
155 156 3.628646 CTCTGCGGGGAAAGGGGTG 62.629 68.421 0.00 0.00 0.00 4.61
156 157 4.740822 CTGCGGGGAAAGGGGTGG 62.741 72.222 0.00 0.00 0.00 4.61
184 185 3.387947 GCCATTGGCCTTGCTGCT 61.388 61.111 17.28 0.00 44.06 4.24
185 186 2.577059 CCATTGGCCTTGCTGCTG 59.423 61.111 3.32 0.00 0.00 4.41
186 187 2.125673 CATTGGCCTTGCTGCTGC 60.126 61.111 8.89 8.89 40.20 5.25
187 188 3.387947 ATTGGCCTTGCTGCTGCC 61.388 61.111 13.47 17.52 45.56 4.85
208 209 3.483869 GCCGGAGAAGAGCCCCAT 61.484 66.667 5.05 0.00 0.00 4.00
209 210 2.825264 CCGGAGAAGAGCCCCATC 59.175 66.667 0.00 0.00 0.00 3.51
210 211 1.764054 CCGGAGAAGAGCCCCATCT 60.764 63.158 0.00 0.00 0.00 2.90
211 212 1.745264 CGGAGAAGAGCCCCATCTC 59.255 63.158 0.00 0.00 39.06 2.75
212 213 1.745264 GGAGAAGAGCCCCATCTCG 59.255 63.158 0.00 0.00 40.37 4.04
213 214 1.068921 GAGAAGAGCCCCATCTCGC 59.931 63.158 0.00 0.00 38.12 5.03
214 215 1.382420 AGAAGAGCCCCATCTCGCT 60.382 57.895 0.00 0.00 38.12 4.93
215 216 1.227497 GAAGAGCCCCATCTCGCTG 60.227 63.158 0.00 0.00 38.12 5.18
216 217 1.965754 GAAGAGCCCCATCTCGCTGT 61.966 60.000 0.00 0.00 38.12 4.40
217 218 2.202987 GAGCCCCATCTCGCTGTG 60.203 66.667 0.00 0.00 34.84 3.66
218 219 3.746949 GAGCCCCATCTCGCTGTGG 62.747 68.421 0.00 0.00 34.84 4.17
219 220 4.101448 GCCCCATCTCGCTGTGGT 62.101 66.667 0.00 0.00 33.55 4.16
220 221 2.671070 CCCCATCTCGCTGTGGTT 59.329 61.111 0.00 0.00 33.55 3.67
221 222 1.450312 CCCCATCTCGCTGTGGTTC 60.450 63.158 0.00 0.00 33.55 3.62
222 223 1.599047 CCCATCTCGCTGTGGTTCT 59.401 57.895 0.00 0.00 33.55 3.01
223 224 0.742281 CCCATCTCGCTGTGGTTCTG 60.742 60.000 0.00 0.00 33.55 3.02
224 225 0.742281 CCATCTCGCTGTGGTTCTGG 60.742 60.000 0.00 0.00 0.00 3.86
225 226 0.036952 CATCTCGCTGTGGTTCTGGT 60.037 55.000 0.00 0.00 0.00 4.00
226 227 0.036952 ATCTCGCTGTGGTTCTGGTG 60.037 55.000 0.00 0.00 0.00 4.17
227 228 1.669115 CTCGCTGTGGTTCTGGTGG 60.669 63.158 0.00 0.00 0.00 4.61
228 229 3.357079 CGCTGTGGTTCTGGTGGC 61.357 66.667 0.00 0.00 0.00 5.01
229 230 2.113986 GCTGTGGTTCTGGTGGCT 59.886 61.111 0.00 0.00 0.00 4.75
230 231 1.374947 GCTGTGGTTCTGGTGGCTA 59.625 57.895 0.00 0.00 0.00 3.93
231 232 0.674895 GCTGTGGTTCTGGTGGCTAG 60.675 60.000 0.00 0.00 0.00 3.42
232 233 0.036010 CTGTGGTTCTGGTGGCTAGG 60.036 60.000 0.00 0.00 0.00 3.02
233 234 1.299976 GTGGTTCTGGTGGCTAGGG 59.700 63.158 0.00 0.00 0.00 3.53
234 235 1.151899 TGGTTCTGGTGGCTAGGGT 60.152 57.895 0.00 0.00 0.00 4.34
235 236 0.770557 TGGTTCTGGTGGCTAGGGTT 60.771 55.000 0.00 0.00 0.00 4.11
236 237 0.404426 GGTTCTGGTGGCTAGGGTTT 59.596 55.000 0.00 0.00 0.00 3.27
237 238 1.534729 GTTCTGGTGGCTAGGGTTTG 58.465 55.000 0.00 0.00 0.00 2.93
238 239 1.145571 TTCTGGTGGCTAGGGTTTGT 58.854 50.000 0.00 0.00 0.00 2.83
239 240 0.690762 TCTGGTGGCTAGGGTTTGTC 59.309 55.000 0.00 0.00 0.00 3.18
240 241 0.673644 CTGGTGGCTAGGGTTTGTCG 60.674 60.000 0.00 0.00 0.00 4.35
241 242 1.376812 GGTGGCTAGGGTTTGTCGG 60.377 63.158 0.00 0.00 0.00 4.79
242 243 1.373812 GTGGCTAGGGTTTGTCGGT 59.626 57.895 0.00 0.00 0.00 4.69
243 244 0.953960 GTGGCTAGGGTTTGTCGGTG 60.954 60.000 0.00 0.00 0.00 4.94
244 245 1.122632 TGGCTAGGGTTTGTCGGTGA 61.123 55.000 0.00 0.00 0.00 4.02
245 246 0.672711 GGCTAGGGTTTGTCGGTGAC 60.673 60.000 0.00 0.00 0.00 3.67
257 258 2.266055 GGTGACGGGGAAGCAGAG 59.734 66.667 0.00 0.00 0.00 3.35
258 259 2.435059 GTGACGGGGAAGCAGAGC 60.435 66.667 0.00 0.00 0.00 4.09
259 260 2.604686 TGACGGGGAAGCAGAGCT 60.605 61.111 0.00 0.00 42.56 4.09
260 261 2.125350 GACGGGGAAGCAGAGCTG 60.125 66.667 0.00 0.00 39.62 4.24
261 262 3.672295 GACGGGGAAGCAGAGCTGG 62.672 68.421 0.00 0.00 39.62 4.85
263 264 3.726144 GGGGAAGCAGAGCTGGCT 61.726 66.667 3.69 3.69 45.15 4.75
264 265 2.370445 GGGGAAGCAGAGCTGGCTA 61.370 63.158 9.71 0.00 41.66 3.93
265 266 1.145819 GGGAAGCAGAGCTGGCTAG 59.854 63.158 9.71 0.00 41.66 3.42
266 267 1.333636 GGGAAGCAGAGCTGGCTAGA 61.334 60.000 9.71 0.00 41.66 2.43
267 268 0.758123 GGAAGCAGAGCTGGCTAGAT 59.242 55.000 9.71 0.00 41.66 1.98
268 269 1.540797 GGAAGCAGAGCTGGCTAGATG 60.541 57.143 9.71 0.00 41.66 2.90
269 270 1.138661 GAAGCAGAGCTGGCTAGATGT 59.861 52.381 9.71 0.00 41.66 3.06
270 271 0.464870 AGCAGAGCTGGCTAGATGTG 59.535 55.000 8.17 8.17 40.47 3.21
271 272 0.532417 GCAGAGCTGGCTAGATGTGG 60.532 60.000 14.19 0.00 34.48 4.17
272 273 1.117994 CAGAGCTGGCTAGATGTGGA 58.882 55.000 4.45 0.00 30.66 4.02
273 274 1.118838 AGAGCTGGCTAGATGTGGAC 58.881 55.000 0.00 0.00 0.00 4.02
274 275 0.249238 GAGCTGGCTAGATGTGGACG 60.249 60.000 0.00 0.00 0.00 4.79
275 276 1.227380 GCTGGCTAGATGTGGACGG 60.227 63.158 0.00 0.00 0.00 4.79
276 277 1.227380 CTGGCTAGATGTGGACGGC 60.227 63.158 0.00 0.00 0.00 5.68
277 278 2.279517 GGCTAGATGTGGACGGCG 60.280 66.667 4.80 4.80 0.00 6.46
278 279 2.782222 GGCTAGATGTGGACGGCGA 61.782 63.158 16.62 0.00 0.00 5.54
279 280 1.299468 GCTAGATGTGGACGGCGAG 60.299 63.158 16.62 0.00 0.00 5.03
280 281 2.005960 GCTAGATGTGGACGGCGAGT 62.006 60.000 16.62 0.00 0.00 4.18
281 282 0.456221 CTAGATGTGGACGGCGAGTT 59.544 55.000 16.62 0.00 0.00 3.01
282 283 0.892755 TAGATGTGGACGGCGAGTTT 59.107 50.000 16.62 0.00 0.00 2.66
283 284 0.670546 AGATGTGGACGGCGAGTTTG 60.671 55.000 16.62 0.00 0.00 2.93
284 285 1.635663 GATGTGGACGGCGAGTTTGG 61.636 60.000 16.62 0.00 0.00 3.28
285 286 2.029964 GTGGACGGCGAGTTTGGA 59.970 61.111 16.62 0.00 0.00 3.53
286 287 1.375523 GTGGACGGCGAGTTTGGAT 60.376 57.895 16.62 0.00 0.00 3.41
287 288 1.375396 TGGACGGCGAGTTTGGATG 60.375 57.895 16.62 0.00 0.00 3.51
288 289 1.079405 GGACGGCGAGTTTGGATGA 60.079 57.895 16.62 0.00 0.00 2.92
289 290 1.084370 GGACGGCGAGTTTGGATGAG 61.084 60.000 16.62 0.00 0.00 2.90
290 291 1.079127 ACGGCGAGTTTGGATGAGG 60.079 57.895 16.62 0.00 0.00 3.86
291 292 1.218047 CGGCGAGTTTGGATGAGGA 59.782 57.895 0.00 0.00 0.00 3.71
292 293 1.084370 CGGCGAGTTTGGATGAGGAC 61.084 60.000 0.00 0.00 0.00 3.85
293 294 1.084370 GGCGAGTTTGGATGAGGACG 61.084 60.000 0.00 0.00 0.00 4.79
294 295 1.084370 GCGAGTTTGGATGAGGACGG 61.084 60.000 0.00 0.00 0.00 4.79
295 296 1.084370 CGAGTTTGGATGAGGACGGC 61.084 60.000 0.00 0.00 0.00 5.68
296 297 0.744771 GAGTTTGGATGAGGACGGCC 60.745 60.000 0.00 0.00 0.00 6.13
297 298 1.749258 GTTTGGATGAGGACGGCCC 60.749 63.158 1.76 0.00 33.31 5.80
298 299 2.978946 TTTGGATGAGGACGGCCCC 61.979 63.158 1.76 0.00 34.66 5.80
317 318 3.346101 CCGCACGGTTGGCTTAAA 58.654 55.556 0.00 0.00 0.00 1.52
318 319 1.655329 CCGCACGGTTGGCTTAAAA 59.345 52.632 0.00 0.00 0.00 1.52
319 320 0.030908 CCGCACGGTTGGCTTAAAAA 59.969 50.000 0.00 0.00 0.00 1.94
359 360 3.776781 CGTGGGCCCGTGGTCATA 61.777 66.667 19.37 0.00 0.00 2.15
360 361 2.672295 GTGGGCCCGTGGTCATAA 59.328 61.111 19.37 0.00 0.00 1.90
361 362 1.001887 GTGGGCCCGTGGTCATAAA 60.002 57.895 19.37 0.00 0.00 1.40
362 363 0.395173 GTGGGCCCGTGGTCATAAAT 60.395 55.000 19.37 0.00 0.00 1.40
363 364 0.333312 TGGGCCCGTGGTCATAAATT 59.667 50.000 19.37 0.00 0.00 1.82
364 365 1.564818 TGGGCCCGTGGTCATAAATTA 59.435 47.619 19.37 0.00 0.00 1.40
365 366 2.025226 TGGGCCCGTGGTCATAAATTAA 60.025 45.455 19.37 0.00 0.00 1.40
366 367 2.621526 GGGCCCGTGGTCATAAATTAAG 59.378 50.000 5.69 0.00 0.00 1.85
367 368 2.034179 GGCCCGTGGTCATAAATTAAGC 59.966 50.000 0.00 0.00 0.00 3.09
368 369 2.949644 GCCCGTGGTCATAAATTAAGCT 59.050 45.455 0.00 0.00 0.00 3.74
369 370 3.243068 GCCCGTGGTCATAAATTAAGCTG 60.243 47.826 0.00 0.00 0.00 4.24
370 371 4.196193 CCCGTGGTCATAAATTAAGCTGA 58.804 43.478 0.00 0.00 0.00 4.26
371 372 4.821805 CCCGTGGTCATAAATTAAGCTGAT 59.178 41.667 0.00 0.00 0.00 2.90
372 373 5.049405 CCCGTGGTCATAAATTAAGCTGATC 60.049 44.000 0.00 0.00 0.00 2.92
373 374 5.333339 CCGTGGTCATAAATTAAGCTGATCG 60.333 44.000 0.00 0.00 0.00 3.69
374 375 5.444122 GTGGTCATAAATTAAGCTGATCGC 58.556 41.667 0.00 1.92 39.57 4.58
375 376 4.211164 TGGTCATAAATTAAGCTGATCGCG 59.789 41.667 0.00 0.00 45.59 5.87
376 377 4.211374 GGTCATAAATTAAGCTGATCGCGT 59.789 41.667 5.77 0.00 45.59 6.01
377 378 5.133264 GTCATAAATTAAGCTGATCGCGTG 58.867 41.667 5.77 0.00 45.59 5.34
378 379 5.047188 TCATAAATTAAGCTGATCGCGTGA 58.953 37.500 5.77 0.00 45.59 4.35
379 380 5.696270 TCATAAATTAAGCTGATCGCGTGAT 59.304 36.000 12.10 12.10 45.59 3.06
380 381 3.867055 AATTAAGCTGATCGCGTGATG 57.133 42.857 17.73 3.91 45.59 3.07
381 382 2.293677 TTAAGCTGATCGCGTGATGT 57.706 45.000 17.73 0.00 45.59 3.06
382 383 3.430333 TTAAGCTGATCGCGTGATGTA 57.570 42.857 17.73 4.27 45.59 2.29
383 384 2.515926 AAGCTGATCGCGTGATGTAT 57.484 45.000 17.73 0.00 45.59 2.29
391 392 3.942539 TCGCGTGATGTATTGAATTGG 57.057 42.857 5.77 0.00 0.00 3.16
393 394 4.434520 TCGCGTGATGTATTGAATTGGTA 58.565 39.130 5.77 0.00 0.00 3.25
427 428 9.435688 AAATAAATTTTGTCAAATGTAGGAGGC 57.564 29.630 0.00 0.00 32.57 4.70
428 429 5.405935 AATTTTGTCAAATGTAGGAGGCC 57.594 39.130 0.00 0.00 32.57 5.19
430 431 1.271856 TGTCAAATGTAGGAGGCCGA 58.728 50.000 0.00 0.00 0.00 5.54
450 451 0.796312 CAAGGACGGACGTTTGATGG 59.204 55.000 0.00 0.00 0.00 3.51
459 460 1.234615 ACGTTTGATGGCTCCGGTTG 61.235 55.000 0.00 0.00 0.00 3.77
470 471 0.745845 CTCCGGTTGAATGGCCTCTG 60.746 60.000 3.32 0.00 0.00 3.35
481 482 4.672251 GCCTCTGCCATGTCCATT 57.328 55.556 0.00 0.00 0.00 3.16
488 489 4.008330 CTCTGCCATGTCCATTATCCATC 58.992 47.826 0.00 0.00 0.00 3.51
489 490 3.654321 TCTGCCATGTCCATTATCCATCT 59.346 43.478 0.00 0.00 0.00 2.90
490 491 4.105217 TCTGCCATGTCCATTATCCATCTT 59.895 41.667 0.00 0.00 0.00 2.40
491 492 4.401022 TGCCATGTCCATTATCCATCTTC 58.599 43.478 0.00 0.00 0.00 2.87
492 493 3.760684 GCCATGTCCATTATCCATCTTCC 59.239 47.826 0.00 0.00 0.00 3.46
493 494 4.005650 CCATGTCCATTATCCATCTTCCG 58.994 47.826 0.00 0.00 0.00 4.30
494 495 4.263025 CCATGTCCATTATCCATCTTCCGA 60.263 45.833 0.00 0.00 0.00 4.55
495 496 4.336889 TGTCCATTATCCATCTTCCGAC 57.663 45.455 0.00 0.00 0.00 4.79
497 498 4.202253 TGTCCATTATCCATCTTCCGACTG 60.202 45.833 0.00 0.00 0.00 3.51
498 499 3.967326 TCCATTATCCATCTTCCGACTGT 59.033 43.478 0.00 0.00 0.00 3.55
499 500 4.408921 TCCATTATCCATCTTCCGACTGTT 59.591 41.667 0.00 0.00 0.00 3.16
501 502 5.237344 CCATTATCCATCTTCCGACTGTTTC 59.763 44.000 0.00 0.00 0.00 2.78
502 503 5.677319 TTATCCATCTTCCGACTGTTTCT 57.323 39.130 0.00 0.00 0.00 2.52
503 504 3.319137 TCCATCTTCCGACTGTTTCTG 57.681 47.619 0.00 0.00 0.00 3.02
504 505 2.632996 TCCATCTTCCGACTGTTTCTGT 59.367 45.455 0.00 0.00 0.00 3.41
505 506 2.738846 CCATCTTCCGACTGTTTCTGTG 59.261 50.000 0.00 0.00 0.00 3.66
506 507 3.554960 CCATCTTCCGACTGTTTCTGTGA 60.555 47.826 0.00 0.00 0.00 3.58
507 508 3.812156 TCTTCCGACTGTTTCTGTGAA 57.188 42.857 0.00 0.00 0.00 3.18
508 509 4.336889 TCTTCCGACTGTTTCTGTGAAT 57.663 40.909 0.00 0.00 0.00 2.57
509 510 5.462530 TCTTCCGACTGTTTCTGTGAATA 57.537 39.130 0.00 0.00 0.00 1.75
510 511 6.037786 TCTTCCGACTGTTTCTGTGAATAT 57.962 37.500 0.00 0.00 0.00 1.28
511 512 6.464222 TCTTCCGACTGTTTCTGTGAATATT 58.536 36.000 0.00 0.00 0.00 1.28
544 545 4.753516 TGATGTTCATTAGGTGATCCGT 57.246 40.909 0.00 0.00 36.54 4.69
611 613 1.613317 TACTCCCGGACACAGCCATG 61.613 60.000 0.73 0.00 0.00 3.66
652 663 1.067669 CCGCGAAATGGATCTCTCTCA 59.932 52.381 8.23 0.00 0.00 3.27
796 809 4.873129 CGCATCCCGGACGTCCAG 62.873 72.222 32.80 22.76 35.14 3.86
892 907 4.798882 CTCACCTCTCCACCTCTATAAGT 58.201 47.826 0.00 0.00 0.00 2.24
945 964 2.124507 CTCCCGCTCCAAGTCCCAAA 62.125 60.000 0.00 0.00 0.00 3.28
947 966 1.971695 CCGCTCCAAGTCCCAAACC 60.972 63.158 0.00 0.00 0.00 3.27
1098 1139 2.437359 CCTGCTGGGAAGAAGCCG 60.437 66.667 0.71 0.00 40.06 5.52
1100 1141 1.449246 CTGCTGGGAAGAAGCCGAG 60.449 63.158 0.00 0.00 40.06 4.63
1357 1419 1.852157 AAGCCCACCATCACCTCCA 60.852 57.895 0.00 0.00 0.00 3.86
1377 1439 3.823369 GGAGATCCAGACCTCCGTA 57.177 57.895 0.00 0.00 39.49 4.02
1392 1454 2.439883 GTACGCCTCGTCCTCCCT 60.440 66.667 0.00 0.00 41.54 4.20
1446 1508 1.106944 CCAAGGCCGTCACCAAGTTT 61.107 55.000 0.00 0.00 0.00 2.66
1461 1523 6.154706 TCACCAAGTTTACCTCCTCTTAGATC 59.845 42.308 0.00 0.00 0.00 2.75
1497 1559 9.250624 GTATCTAGTAGCAAATGTAGTTCCTTG 57.749 37.037 0.00 0.00 0.00 3.61
1573 1635 5.183904 GTCCTACTGTTGGATGAAAATTGCT 59.816 40.000 13.89 0.00 35.87 3.91
1603 1665 2.820330 CAAATGGTTTGTTGGCTCGTT 58.180 42.857 0.00 0.00 35.94 3.85
1619 1681 1.662044 GTTGGCCACCTGCAAGAAG 59.338 57.895 3.88 0.00 43.89 2.85
1623 1685 1.239968 GGCCACCTGCAAGAAGTGAG 61.240 60.000 0.00 0.82 43.89 3.51
1635 1697 3.238108 AGAAGTGAGTTATGTCCGCTG 57.762 47.619 0.00 0.00 0.00 5.18
1636 1698 2.093973 AGAAGTGAGTTATGTCCGCTGG 60.094 50.000 0.00 0.00 0.00 4.85
1639 1701 1.204941 GTGAGTTATGTCCGCTGGTCT 59.795 52.381 0.00 0.00 0.00 3.85
1646 1708 1.523938 GTCCGCTGGTCTATTGGCC 60.524 63.158 0.00 0.00 0.00 5.36
1672 1734 6.142818 TGAAGATTTCGGAAACAATGTTGT 57.857 33.333 5.12 0.00 44.72 3.32
1677 1739 2.803451 TCGGAAACAATGTTGTGTTGC 58.197 42.857 0.00 1.86 40.86 4.17
1698 1762 6.662414 TGCTGGTTCTATTTACTGATTTCG 57.338 37.500 0.00 0.00 0.00 3.46
1722 1786 5.505159 GGCGGTGATTTACTTAATGCCTAAC 60.505 44.000 0.00 0.00 37.03 2.34
1838 1906 2.948979 TGCAGAACCCAGTGTTTTACAG 59.051 45.455 0.00 0.00 37.29 2.74
1886 1983 2.646930 CACTGCTGGCCATGAATAAGA 58.353 47.619 5.51 0.00 0.00 2.10
1913 2010 2.228582 CCGTCTGATTTGTTTGCCATGA 59.771 45.455 0.00 0.00 0.00 3.07
1923 2020 4.044336 TGTTTGCCATGACTTGTTCTTG 57.956 40.909 0.00 0.00 0.00 3.02
1933 2030 6.402118 CCATGACTTGTTCTTGTTACGTATGG 60.402 42.308 0.00 0.00 0.00 2.74
1942 2039 7.176515 TGTTCTTGTTACGTATGGTACTCCTAA 59.823 37.037 0.00 0.00 34.23 2.69
1944 2041 6.658816 TCTTGTTACGTATGGTACTCCTAACA 59.341 38.462 0.00 0.00 34.23 2.41
1953 2050 3.279434 GGTACTCCTAACATTGCCTTGG 58.721 50.000 0.00 0.00 0.00 3.61
1958 2055 1.895131 CCTAACATTGCCTTGGCACTT 59.105 47.619 14.52 8.44 0.00 3.16
1967 2064 1.289276 CCTTGGCACTTGTTTGTTGC 58.711 50.000 0.00 0.00 0.00 4.17
1992 2092 7.306399 GCAAGAACAAGTGATGATTTGTTTCAG 60.306 37.037 7.19 2.50 44.88 3.02
1997 2097 6.543465 ACAAGTGATGATTTGTTTCAGACTGA 59.457 34.615 0.00 0.00 34.00 3.41
2044 2144 5.191426 CAGATTTCTGAATCACCCAGATGT 58.809 41.667 1.15 0.00 46.59 3.06
2055 2155 3.646162 TCACCCAGATGTGTTCTTGTAGT 59.354 43.478 0.00 0.00 37.51 2.73
2060 2160 4.083643 CCAGATGTGTTCTTGTAGTTGCAG 60.084 45.833 0.00 0.00 29.93 4.41
2087 2187 1.895707 GCAAGTGCTCCTGTGTGCT 60.896 57.895 0.00 0.00 38.21 4.40
2096 2196 2.603560 GCTCCTGTGTGCTAATCGTAAC 59.396 50.000 0.00 0.00 0.00 2.50
2117 2217 1.424493 GCTCGGTGGAAATGCTCTCG 61.424 60.000 0.00 0.00 0.00 4.04
2123 2223 2.143122 GTGGAAATGCTCTCGTGTTCA 58.857 47.619 0.00 0.00 0.00 3.18
2147 2251 4.083802 GGTCTGTGAATGTGTTAAGTCAGC 60.084 45.833 0.00 0.00 0.00 4.26
2158 2262 2.928116 GTTAAGTCAGCGGTGTCCATAC 59.072 50.000 15.22 4.84 0.00 2.39
2159 2263 0.249398 AAGTCAGCGGTGTCCATACC 59.751 55.000 15.22 0.00 37.37 2.73
2168 2272 1.471287 GGTGTCCATACCGAAAAAGGC 59.529 52.381 0.00 0.00 33.69 4.35
2169 2273 2.433436 GTGTCCATACCGAAAAAGGCT 58.567 47.619 0.00 0.00 33.69 4.58
2170 2274 2.817844 GTGTCCATACCGAAAAAGGCTT 59.182 45.455 0.00 0.00 33.69 4.35
2171 2275 3.254903 GTGTCCATACCGAAAAAGGCTTT 59.745 43.478 6.68 6.68 33.69 3.51
2172 2276 3.504520 TGTCCATACCGAAAAAGGCTTTC 59.495 43.478 13.76 0.41 33.69 2.62
2174 2278 2.515912 CATACCGAAAAAGGCTTTCGC 58.484 47.619 13.76 7.41 46.89 4.70
2184 2288 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
2185 2289 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
2186 2290 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
2187 2291 1.607148 GCTTTCGCCCCGCTTTATATT 59.393 47.619 0.00 0.00 0.00 1.28
2188 2292 2.809696 GCTTTCGCCCCGCTTTATATTA 59.190 45.455 0.00 0.00 0.00 0.98
2189 2293 3.439129 GCTTTCGCCCCGCTTTATATTAT 59.561 43.478 0.00 0.00 0.00 1.28
2190 2294 4.632688 GCTTTCGCCCCGCTTTATATTATA 59.367 41.667 0.00 0.00 0.00 0.98
2191 2295 5.122711 GCTTTCGCCCCGCTTTATATTATAA 59.877 40.000 0.00 0.00 0.00 0.98
2192 2296 6.348704 GCTTTCGCCCCGCTTTATATTATAAA 60.349 38.462 8.26 8.26 0.00 1.40
2193 2297 6.730960 TTCGCCCCGCTTTATATTATAAAG 57.269 37.500 23.28 23.28 37.53 1.85
2207 2311 9.616156 TTATATTATAAAGCAAACCGTCCAAGA 57.384 29.630 0.00 0.00 0.00 3.02
2208 2312 5.616488 TTATAAAGCAAACCGTCCAAGAC 57.384 39.130 0.00 0.00 0.00 3.01
2209 2313 1.757682 AAAGCAAACCGTCCAAGACA 58.242 45.000 0.00 0.00 32.09 3.41
2210 2314 1.308998 AAGCAAACCGTCCAAGACAG 58.691 50.000 0.00 0.00 32.09 3.51
2211 2315 0.180406 AGCAAACCGTCCAAGACAGT 59.820 50.000 0.00 0.00 32.09 3.55
2212 2316 1.414919 AGCAAACCGTCCAAGACAGTA 59.585 47.619 0.00 0.00 32.09 2.74
2213 2317 2.038557 AGCAAACCGTCCAAGACAGTAT 59.961 45.455 0.00 0.00 32.09 2.12
2214 2318 2.415512 GCAAACCGTCCAAGACAGTATC 59.584 50.000 0.00 0.00 32.09 2.24
2215 2319 3.000727 CAAACCGTCCAAGACAGTATCC 58.999 50.000 0.00 0.00 32.09 2.59
2216 2320 1.933021 ACCGTCCAAGACAGTATCCA 58.067 50.000 0.00 0.00 32.09 3.41
2217 2321 2.253610 ACCGTCCAAGACAGTATCCAA 58.746 47.619 0.00 0.00 32.09 3.53
2218 2322 2.028385 ACCGTCCAAGACAGTATCCAAC 60.028 50.000 0.00 0.00 32.09 3.77
2219 2323 2.028476 CCGTCCAAGACAGTATCCAACA 60.028 50.000 0.00 0.00 32.09 3.33
2220 2324 3.556213 CCGTCCAAGACAGTATCCAACAA 60.556 47.826 0.00 0.00 32.09 2.83
2221 2325 4.062293 CGTCCAAGACAGTATCCAACAAA 58.938 43.478 0.00 0.00 32.09 2.83
2222 2326 4.152402 CGTCCAAGACAGTATCCAACAAAG 59.848 45.833 0.00 0.00 32.09 2.77
2223 2327 5.063880 GTCCAAGACAGTATCCAACAAAGT 58.936 41.667 0.00 0.00 32.09 2.66
2224 2328 5.531287 GTCCAAGACAGTATCCAACAAAGTT 59.469 40.000 0.00 0.00 32.09 2.66
2225 2329 5.763204 TCCAAGACAGTATCCAACAAAGTTC 59.237 40.000 0.00 0.00 0.00 3.01
2226 2330 5.530915 CCAAGACAGTATCCAACAAAGTTCA 59.469 40.000 0.00 0.00 0.00 3.18
2227 2331 6.430451 CAAGACAGTATCCAACAAAGTTCAC 58.570 40.000 0.00 0.00 0.00 3.18
2228 2332 5.680619 AGACAGTATCCAACAAAGTTCACA 58.319 37.500 0.00 0.00 0.00 3.58
2229 2333 5.527582 AGACAGTATCCAACAAAGTTCACAC 59.472 40.000 0.00 0.00 0.00 3.82
2230 2334 5.189928 ACAGTATCCAACAAAGTTCACACA 58.810 37.500 0.00 0.00 0.00 3.72
2231 2335 5.065988 ACAGTATCCAACAAAGTTCACACAC 59.934 40.000 0.00 0.00 0.00 3.82
2232 2336 5.065859 CAGTATCCAACAAAGTTCACACACA 59.934 40.000 0.00 0.00 0.00 3.72
2233 2337 3.840890 TCCAACAAAGTTCACACACAC 57.159 42.857 0.00 0.00 0.00 3.82
2234 2338 2.160615 TCCAACAAAGTTCACACACACG 59.839 45.455 0.00 0.00 0.00 4.49
2235 2339 1.910819 CAACAAAGTTCACACACACGC 59.089 47.619 0.00 0.00 0.00 5.34
2236 2340 1.160989 ACAAAGTTCACACACACGCA 58.839 45.000 0.00 0.00 0.00 5.24
2237 2341 1.135803 ACAAAGTTCACACACACGCAC 60.136 47.619 0.00 0.00 0.00 5.34
2238 2342 1.135831 CAAAGTTCACACACACGCACA 60.136 47.619 0.00 0.00 0.00 4.57
2239 2343 0.446222 AAGTTCACACACACGCACAC 59.554 50.000 0.00 0.00 0.00 3.82
2240 2344 0.672091 AGTTCACACACACGCACACA 60.672 50.000 0.00 0.00 0.00 3.72
2241 2345 0.167033 GTTCACACACACGCACACAA 59.833 50.000 0.00 0.00 0.00 3.33
2242 2346 0.445829 TTCACACACACGCACACAAG 59.554 50.000 0.00 0.00 0.00 3.16
2243 2347 0.672091 TCACACACACGCACACAAGT 60.672 50.000 0.00 0.00 0.00 3.16
2244 2348 0.247655 CACACACACGCACACAAGTC 60.248 55.000 0.00 0.00 0.00 3.01
2245 2349 0.391130 ACACACACGCACACAAGTCT 60.391 50.000 0.00 0.00 0.00 3.24
2246 2350 0.301687 CACACACGCACACAAGTCTC 59.698 55.000 0.00 0.00 0.00 3.36
2247 2351 1.145759 ACACACGCACACAAGTCTCG 61.146 55.000 0.00 0.00 0.00 4.04
2248 2352 2.237751 ACACGCACACAAGTCTCGC 61.238 57.895 0.00 0.00 0.00 5.03
2249 2353 2.106131 ACGCACACAAGTCTCGCA 59.894 55.556 0.00 0.00 0.00 5.10
2250 2354 2.237751 ACGCACACAAGTCTCGCAC 61.238 57.895 0.00 0.00 0.00 5.34
2251 2355 2.237066 CGCACACAAGTCTCGCACA 61.237 57.895 0.00 0.00 0.00 4.57
2252 2356 1.761244 CGCACACAAGTCTCGCACAA 61.761 55.000 0.00 0.00 0.00 3.33
2253 2357 0.316196 GCACACAAGTCTCGCACAAC 60.316 55.000 0.00 0.00 0.00 3.32
2254 2358 0.304705 CACACAAGTCTCGCACAACC 59.695 55.000 0.00 0.00 0.00 3.77
2255 2359 0.107897 ACACAAGTCTCGCACAACCA 60.108 50.000 0.00 0.00 0.00 3.67
2256 2360 0.304705 CACAAGTCTCGCACAACCAC 59.695 55.000 0.00 0.00 0.00 4.16
2257 2361 0.107897 ACAAGTCTCGCACAACCACA 60.108 50.000 0.00 0.00 0.00 4.17
2258 2362 1.013596 CAAGTCTCGCACAACCACAA 58.986 50.000 0.00 0.00 0.00 3.33
2259 2363 1.003545 CAAGTCTCGCACAACCACAAG 60.004 52.381 0.00 0.00 0.00 3.16
2260 2364 0.178068 AGTCTCGCACAACCACAAGT 59.822 50.000 0.00 0.00 0.00 3.16
2261 2365 1.411246 AGTCTCGCACAACCACAAGTA 59.589 47.619 0.00 0.00 0.00 2.24
2262 2366 1.525619 GTCTCGCACAACCACAAGTAC 59.474 52.381 0.00 0.00 0.00 2.73
2263 2367 1.137282 TCTCGCACAACCACAAGTACA 59.863 47.619 0.00 0.00 0.00 2.90
2264 2368 2.143122 CTCGCACAACCACAAGTACAT 58.857 47.619 0.00 0.00 0.00 2.29
2265 2369 3.006003 TCTCGCACAACCACAAGTACATA 59.994 43.478 0.00 0.00 0.00 2.29
2266 2370 3.729966 TCGCACAACCACAAGTACATAA 58.270 40.909 0.00 0.00 0.00 1.90
2267 2371 4.127907 TCGCACAACCACAAGTACATAAA 58.872 39.130 0.00 0.00 0.00 1.40
2268 2372 4.575236 TCGCACAACCACAAGTACATAAAA 59.425 37.500 0.00 0.00 0.00 1.52
2269 2373 4.909305 CGCACAACCACAAGTACATAAAAG 59.091 41.667 0.00 0.00 0.00 2.27
2270 2374 5.219633 GCACAACCACAAGTACATAAAAGG 58.780 41.667 0.00 0.00 0.00 3.11
2271 2375 5.768317 CACAACCACAAGTACATAAAAGGG 58.232 41.667 0.00 0.00 0.00 3.95
2272 2376 5.300792 CACAACCACAAGTACATAAAAGGGT 59.699 40.000 0.00 0.00 0.00 4.34
2273 2377 5.894964 ACAACCACAAGTACATAAAAGGGTT 59.105 36.000 0.00 0.00 36.60 4.11
2274 2378 7.013464 CACAACCACAAGTACATAAAAGGGTTA 59.987 37.037 0.00 0.00 34.57 2.85
2275 2379 7.560626 ACAACCACAAGTACATAAAAGGGTTAA 59.439 33.333 0.00 0.00 34.57 2.01
2276 2380 8.581578 CAACCACAAGTACATAAAAGGGTTAAT 58.418 33.333 0.00 0.00 34.57 1.40
2277 2381 8.117813 ACCACAAGTACATAAAAGGGTTAATG 57.882 34.615 0.00 0.00 0.00 1.90
2278 2382 7.033185 CCACAAGTACATAAAAGGGTTAATGC 58.967 38.462 0.00 0.00 0.00 3.56
2279 2383 7.093945 CCACAAGTACATAAAAGGGTTAATGCT 60.094 37.037 0.00 0.00 0.00 3.79
2280 2384 7.754924 CACAAGTACATAAAAGGGTTAATGCTG 59.245 37.037 0.00 0.00 0.00 4.41
2281 2385 7.668052 ACAAGTACATAAAAGGGTTAATGCTGA 59.332 33.333 0.00 0.00 0.00 4.26
2282 2386 7.865706 AGTACATAAAAGGGTTAATGCTGAG 57.134 36.000 0.00 0.00 0.00 3.35
2283 2387 6.828785 AGTACATAAAAGGGTTAATGCTGAGG 59.171 38.462 0.00 0.00 0.00 3.86
2284 2388 4.956075 ACATAAAAGGGTTAATGCTGAGGG 59.044 41.667 0.00 0.00 0.00 4.30
2285 2389 1.852633 AAAGGGTTAATGCTGAGGGC 58.147 50.000 0.00 0.00 42.22 5.19
2294 2398 4.481195 GCTGAGGGCACAACTCAA 57.519 55.556 0.00 0.00 43.74 3.02
2295 2399 1.952263 GCTGAGGGCACAACTCAAC 59.048 57.895 0.00 0.00 43.74 3.18
2296 2400 0.819259 GCTGAGGGCACAACTCAACA 60.819 55.000 0.00 0.00 43.74 3.33
2297 2401 1.679139 CTGAGGGCACAACTCAACAA 58.321 50.000 0.00 0.00 43.74 2.83
2298 2402 1.605710 CTGAGGGCACAACTCAACAAG 59.394 52.381 0.00 0.00 43.74 3.16
2299 2403 1.064758 TGAGGGCACAACTCAACAAGT 60.065 47.619 0.00 0.00 41.66 3.16
2300 2404 1.604278 GAGGGCACAACTCAACAAGTC 59.396 52.381 0.00 0.00 37.17 3.01
2301 2405 0.668535 GGGCACAACTCAACAAGTCC 59.331 55.000 0.00 0.00 37.17 3.85
2302 2406 1.680338 GGCACAACTCAACAAGTCCT 58.320 50.000 0.00 0.00 37.17 3.85
2303 2407 1.334869 GGCACAACTCAACAAGTCCTG 59.665 52.381 0.00 0.00 37.17 3.86
2304 2408 1.334869 GCACAACTCAACAAGTCCTGG 59.665 52.381 0.00 0.00 37.17 4.45
2305 2409 2.917933 CACAACTCAACAAGTCCTGGA 58.082 47.619 0.00 0.00 37.17 3.86
2306 2410 3.278574 CACAACTCAACAAGTCCTGGAA 58.721 45.455 0.00 0.00 37.17 3.53
2307 2411 3.694072 CACAACTCAACAAGTCCTGGAAA 59.306 43.478 0.00 0.00 37.17 3.13
2308 2412 3.694566 ACAACTCAACAAGTCCTGGAAAC 59.305 43.478 0.00 0.00 37.17 2.78
2309 2413 3.644966 ACTCAACAAGTCCTGGAAACA 57.355 42.857 0.00 0.00 30.02 2.83
2331 2435 0.601057 AAAAATAGCACCCACACGCC 59.399 50.000 0.00 0.00 0.00 5.68
2332 2436 0.251165 AAAATAGCACCCACACGCCT 60.251 50.000 0.00 0.00 0.00 5.52
2333 2437 0.616371 AAATAGCACCCACACGCCTA 59.384 50.000 0.00 0.00 0.00 3.93
2334 2438 0.107848 AATAGCACCCACACGCCTAC 60.108 55.000 0.00 0.00 0.00 3.18
2335 2439 1.261938 ATAGCACCCACACGCCTACA 61.262 55.000 0.00 0.00 0.00 2.74
2336 2440 2.162338 TAGCACCCACACGCCTACAC 62.162 60.000 0.00 0.00 0.00 2.90
2337 2441 2.358247 CACCCACACGCCTACACC 60.358 66.667 0.00 0.00 0.00 4.16
2338 2442 3.633116 ACCCACACGCCTACACCC 61.633 66.667 0.00 0.00 0.00 4.61
2339 2443 3.632080 CCCACACGCCTACACCCA 61.632 66.667 0.00 0.00 0.00 4.51
2340 2444 2.047274 CCACACGCCTACACCCAG 60.047 66.667 0.00 0.00 0.00 4.45
2341 2445 2.742372 CACACGCCTACACCCAGC 60.742 66.667 0.00 0.00 0.00 4.85
2342 2446 3.238497 ACACGCCTACACCCAGCA 61.238 61.111 0.00 0.00 0.00 4.41
2343 2447 2.031919 CACGCCTACACCCAGCAA 59.968 61.111 0.00 0.00 0.00 3.91
2344 2448 2.032071 ACGCCTACACCCAGCAAC 59.968 61.111 0.00 0.00 0.00 4.17
2345 2449 2.031919 CGCCTACACCCAGCAACA 59.968 61.111 0.00 0.00 0.00 3.33
2346 2450 2.325082 CGCCTACACCCAGCAACAC 61.325 63.158 0.00 0.00 0.00 3.32
2347 2451 2.325082 GCCTACACCCAGCAACACG 61.325 63.158 0.00 0.00 0.00 4.49
2348 2452 1.369692 CCTACACCCAGCAACACGA 59.630 57.895 0.00 0.00 0.00 4.35
2349 2453 0.250124 CCTACACCCAGCAACACGAA 60.250 55.000 0.00 0.00 0.00 3.85
2350 2454 0.865769 CTACACCCAGCAACACGAAC 59.134 55.000 0.00 0.00 0.00 3.95
2351 2455 0.466543 TACACCCAGCAACACGAACT 59.533 50.000 0.00 0.00 0.00 3.01
2352 2456 0.814010 ACACCCAGCAACACGAACTC 60.814 55.000 0.00 0.00 0.00 3.01
2353 2457 0.813610 CACCCAGCAACACGAACTCA 60.814 55.000 0.00 0.00 0.00 3.41
2354 2458 0.107410 ACCCAGCAACACGAACTCAA 60.107 50.000 0.00 0.00 0.00 3.02
2355 2459 1.238439 CCCAGCAACACGAACTCAAT 58.762 50.000 0.00 0.00 0.00 2.57
2356 2460 1.197721 CCCAGCAACACGAACTCAATC 59.802 52.381 0.00 0.00 0.00 2.67
2358 2462 1.136252 CAGCAACACGAACTCAATCGG 60.136 52.381 1.59 0.00 46.82 4.18
2361 2465 4.598257 CACGAACTCAATCGGGCT 57.402 55.556 1.59 0.00 46.82 5.19
2362 2466 2.373938 CACGAACTCAATCGGGCTC 58.626 57.895 1.59 0.00 46.82 4.70
2363 2467 1.084370 CACGAACTCAATCGGGCTCC 61.084 60.000 1.59 0.00 46.82 4.70
2376 2480 3.787001 GCTCCGGAGAAGGGGGTG 61.787 72.222 35.69 6.40 0.00 4.61
2377 2481 3.083997 CTCCGGAGAAGGGGGTGG 61.084 72.222 28.21 0.00 0.00 4.61
2411 2515 4.847516 CGGACGGCAATCGAGCGA 62.848 66.667 0.00 0.00 42.43 4.93
2412 2516 2.508439 GGACGGCAATCGAGCGAA 60.508 61.111 0.00 0.00 42.43 4.70
2413 2517 2.517450 GGACGGCAATCGAGCGAAG 61.517 63.158 0.00 0.00 42.43 3.79
2414 2518 2.509336 ACGGCAATCGAGCGAAGG 60.509 61.111 0.00 0.00 42.43 3.46
2415 2519 2.509336 CGGCAATCGAGCGAAGGT 60.509 61.111 0.00 0.00 46.54 3.50
2425 2529 4.094684 GCGAAGGTCGGTGATGAG 57.905 61.111 0.00 0.00 40.84 2.90
2426 2530 1.519455 GCGAAGGTCGGTGATGAGG 60.519 63.158 0.00 0.00 40.84 3.86
2427 2531 1.141881 CGAAGGTCGGTGATGAGGG 59.858 63.158 0.00 0.00 36.00 4.30
2428 2532 1.605058 CGAAGGTCGGTGATGAGGGT 61.605 60.000 0.00 0.00 36.00 4.34
2429 2533 0.108138 GAAGGTCGGTGATGAGGGTG 60.108 60.000 0.00 0.00 0.00 4.61
2430 2534 0.836400 AAGGTCGGTGATGAGGGTGT 60.836 55.000 0.00 0.00 0.00 4.16
2431 2535 0.836400 AGGTCGGTGATGAGGGTGTT 60.836 55.000 0.00 0.00 0.00 3.32
2432 2536 0.673644 GGTCGGTGATGAGGGTGTTG 60.674 60.000 0.00 0.00 0.00 3.33
2433 2537 0.320374 GTCGGTGATGAGGGTGTTGA 59.680 55.000 0.00 0.00 0.00 3.18
2434 2538 1.066143 GTCGGTGATGAGGGTGTTGAT 60.066 52.381 0.00 0.00 0.00 2.57
2435 2539 1.066215 TCGGTGATGAGGGTGTTGATG 60.066 52.381 0.00 0.00 0.00 3.07
2436 2540 1.755179 GGTGATGAGGGTGTTGATGG 58.245 55.000 0.00 0.00 0.00 3.51
2437 2541 1.098050 GTGATGAGGGTGTTGATGGC 58.902 55.000 0.00 0.00 0.00 4.40
2438 2542 0.392863 TGATGAGGGTGTTGATGGCG 60.393 55.000 0.00 0.00 0.00 5.69
2439 2543 0.392998 GATGAGGGTGTTGATGGCGT 60.393 55.000 0.00 0.00 0.00 5.68
2440 2544 0.392998 ATGAGGGTGTTGATGGCGTC 60.393 55.000 0.00 0.00 0.00 5.19
2441 2545 1.745489 GAGGGTGTTGATGGCGTCC 60.745 63.158 3.88 0.00 0.00 4.79
2442 2546 2.750237 GGGTGTTGATGGCGTCCC 60.750 66.667 3.88 0.00 0.00 4.46
2443 2547 3.124921 GGTGTTGATGGCGTCCCG 61.125 66.667 3.88 0.00 0.00 5.14
2444 2548 3.124921 GTGTTGATGGCGTCCCGG 61.125 66.667 3.88 0.00 0.00 5.73
2445 2549 3.632080 TGTTGATGGCGTCCCGGT 61.632 61.111 0.00 0.00 0.00 5.28
2446 2550 2.818274 GTTGATGGCGTCCCGGTC 60.818 66.667 0.00 0.00 0.00 4.79
2447 2551 4.090588 TTGATGGCGTCCCGGTCC 62.091 66.667 0.00 0.00 0.00 4.46
2449 2553 4.530857 GATGGCGTCCCGGTCCTG 62.531 72.222 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.265739 GCACGACTGGCATCTGGA 59.734 61.111 0.00 0.00 0.00 3.86
1 2 3.190849 CGCACGACTGGCATCTGG 61.191 66.667 0.00 0.00 0.00 3.86
2 3 3.190849 CCGCACGACTGGCATCTG 61.191 66.667 0.00 0.00 0.00 2.90
19 20 3.323758 TACCATGGCGTGACCCTGC 62.324 63.158 13.04 0.00 37.83 4.85
20 21 1.449601 GTACCATGGCGTGACCCTG 60.450 63.158 13.04 0.00 37.83 4.45
21 22 2.987125 GTACCATGGCGTGACCCT 59.013 61.111 13.04 0.00 37.83 4.34
22 23 2.510691 CGTACCATGGCGTGACCC 60.511 66.667 13.04 0.00 37.83 4.46
23 24 2.510691 CCGTACCATGGCGTGACC 60.511 66.667 13.04 0.00 39.84 4.02
24 25 3.192922 GCCGTACCATGGCGTGAC 61.193 66.667 13.04 4.08 40.96 3.67
30 31 2.203070 GCCTCTGCCGTACCATGG 60.203 66.667 11.19 11.19 0.00 3.66
31 32 1.522355 CAGCCTCTGCCGTACCATG 60.522 63.158 0.00 0.00 38.69 3.66
32 33 2.735772 CCAGCCTCTGCCGTACCAT 61.736 63.158 0.00 0.00 38.69 3.55
33 34 3.390521 CCAGCCTCTGCCGTACCA 61.391 66.667 0.00 0.00 38.69 3.25
34 35 4.840005 GCCAGCCTCTGCCGTACC 62.840 72.222 0.00 0.00 38.69 3.34
79 80 4.666532 GCGTGAACGTGCCAGTGC 62.667 66.667 4.59 0.00 42.22 4.40
80 81 4.354212 CGCGTGAACGTGCCAGTG 62.354 66.667 3.19 0.00 43.06 3.66
122 123 3.839432 GAGTTCCTCCCGCCTCCG 61.839 72.222 0.00 0.00 0.00 4.63
123 124 2.364448 AGAGTTCCTCCCGCCTCC 60.364 66.667 0.00 0.00 0.00 4.30
124 125 2.896443 CAGAGTTCCTCCCGCCTC 59.104 66.667 0.00 0.00 0.00 4.70
125 126 3.394836 GCAGAGTTCCTCCCGCCT 61.395 66.667 0.00 0.00 0.00 5.52
126 127 4.821589 CGCAGAGTTCCTCCCGCC 62.822 72.222 0.00 0.00 0.00 6.13
127 128 4.821589 CCGCAGAGTTCCTCCCGC 62.822 72.222 0.00 0.00 0.00 6.13
128 129 4.148825 CCCGCAGAGTTCCTCCCG 62.149 72.222 0.00 0.00 0.00 5.14
129 130 3.787001 CCCCGCAGAGTTCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
130 131 1.838073 TTTCCCCGCAGAGTTCCTCC 61.838 60.000 0.00 0.00 0.00 4.30
131 132 0.391793 CTTTCCCCGCAGAGTTCCTC 60.392 60.000 0.00 0.00 0.00 3.71
132 133 1.679898 CTTTCCCCGCAGAGTTCCT 59.320 57.895 0.00 0.00 0.00 3.36
133 134 1.377333 CCTTTCCCCGCAGAGTTCC 60.377 63.158 0.00 0.00 0.00 3.62
134 135 1.377333 CCCTTTCCCCGCAGAGTTC 60.377 63.158 0.00 0.00 0.00 3.01
135 136 2.757077 CCCTTTCCCCGCAGAGTT 59.243 61.111 0.00 0.00 0.00 3.01
136 137 3.330720 CCCCTTTCCCCGCAGAGT 61.331 66.667 0.00 0.00 0.00 3.24
137 138 3.330720 ACCCCTTTCCCCGCAGAG 61.331 66.667 0.00 0.00 0.00 3.35
138 139 3.646715 CACCCCTTTCCCCGCAGA 61.647 66.667 0.00 0.00 0.00 4.26
139 140 4.740822 CCACCCCTTTCCCCGCAG 62.741 72.222 0.00 0.00 0.00 5.18
168 169 2.577059 CAGCAGCAAGGCCAATGG 59.423 61.111 5.01 0.00 0.00 3.16
169 170 2.125673 GCAGCAGCAAGGCCAATG 60.126 61.111 5.01 4.56 41.58 2.82
170 171 3.387947 GGCAGCAGCAAGGCCAAT 61.388 61.111 15.65 0.00 46.92 3.16
191 192 3.468326 GATGGGGCTCTTCTCCGGC 62.468 68.421 0.00 0.00 0.00 6.13
192 193 1.753368 GAGATGGGGCTCTTCTCCGG 61.753 65.000 17.26 0.00 39.44 5.14
193 194 1.745264 GAGATGGGGCTCTTCTCCG 59.255 63.158 17.26 0.00 39.44 4.63
194 195 1.745264 CGAGATGGGGCTCTTCTCC 59.255 63.158 20.90 7.04 41.17 3.71
195 196 1.068921 GCGAGATGGGGCTCTTCTC 59.931 63.158 17.92 17.92 40.96 2.87
196 197 1.382420 AGCGAGATGGGGCTCTTCT 60.382 57.895 1.83 1.83 33.32 2.85
197 198 1.227497 CAGCGAGATGGGGCTCTTC 60.227 63.158 0.00 0.00 37.41 2.87
198 199 1.992277 ACAGCGAGATGGGGCTCTT 60.992 57.895 0.00 0.00 37.41 2.85
199 200 2.364842 ACAGCGAGATGGGGCTCT 60.365 61.111 0.00 0.00 37.41 4.09
200 201 2.202987 CACAGCGAGATGGGGCTC 60.203 66.667 0.00 0.00 37.41 4.70
201 202 3.790437 CCACAGCGAGATGGGGCT 61.790 66.667 0.00 0.00 36.82 5.19
204 205 0.742281 CAGAACCACAGCGAGATGGG 60.742 60.000 4.54 0.00 40.59 4.00
205 206 0.742281 CCAGAACCACAGCGAGATGG 60.742 60.000 0.00 0.00 42.13 3.51
206 207 0.036952 ACCAGAACCACAGCGAGATG 60.037 55.000 0.00 0.00 0.00 2.90
207 208 0.036952 CACCAGAACCACAGCGAGAT 60.037 55.000 0.00 0.00 0.00 2.75
208 209 1.367471 CACCAGAACCACAGCGAGA 59.633 57.895 0.00 0.00 0.00 4.04
209 210 1.669115 CCACCAGAACCACAGCGAG 60.669 63.158 0.00 0.00 0.00 5.03
210 211 2.425592 CCACCAGAACCACAGCGA 59.574 61.111 0.00 0.00 0.00 4.93
211 212 2.449031 TAGCCACCAGAACCACAGCG 62.449 60.000 0.00 0.00 0.00 5.18
212 213 0.674895 CTAGCCACCAGAACCACAGC 60.675 60.000 0.00 0.00 0.00 4.40
213 214 0.036010 CCTAGCCACCAGAACCACAG 60.036 60.000 0.00 0.00 0.00 3.66
214 215 1.488705 CCCTAGCCACCAGAACCACA 61.489 60.000 0.00 0.00 0.00 4.17
215 216 1.299976 CCCTAGCCACCAGAACCAC 59.700 63.158 0.00 0.00 0.00 4.16
216 217 0.770557 AACCCTAGCCACCAGAACCA 60.771 55.000 0.00 0.00 0.00 3.67
217 218 0.404426 AAACCCTAGCCACCAGAACC 59.596 55.000 0.00 0.00 0.00 3.62
218 219 1.202891 ACAAACCCTAGCCACCAGAAC 60.203 52.381 0.00 0.00 0.00 3.01
219 220 1.073284 GACAAACCCTAGCCACCAGAA 59.927 52.381 0.00 0.00 0.00 3.02
220 221 0.690762 GACAAACCCTAGCCACCAGA 59.309 55.000 0.00 0.00 0.00 3.86
221 222 0.673644 CGACAAACCCTAGCCACCAG 60.674 60.000 0.00 0.00 0.00 4.00
222 223 1.373435 CGACAAACCCTAGCCACCA 59.627 57.895 0.00 0.00 0.00 4.17
223 224 1.376812 CCGACAAACCCTAGCCACC 60.377 63.158 0.00 0.00 0.00 4.61
224 225 0.953960 CACCGACAAACCCTAGCCAC 60.954 60.000 0.00 0.00 0.00 5.01
225 226 1.122632 TCACCGACAAACCCTAGCCA 61.123 55.000 0.00 0.00 0.00 4.75
226 227 0.672711 GTCACCGACAAACCCTAGCC 60.673 60.000 0.00 0.00 32.09 3.93
227 228 1.012486 CGTCACCGACAAACCCTAGC 61.012 60.000 0.00 0.00 35.63 3.42
228 229 0.389426 CCGTCACCGACAAACCCTAG 60.389 60.000 0.00 0.00 35.63 3.02
229 230 1.667151 CCGTCACCGACAAACCCTA 59.333 57.895 0.00 0.00 35.63 3.53
230 231 2.424302 CCGTCACCGACAAACCCT 59.576 61.111 0.00 0.00 35.63 4.34
231 232 2.667199 CCCGTCACCGACAAACCC 60.667 66.667 0.00 0.00 35.63 4.11
232 233 2.663423 TTCCCCGTCACCGACAAACC 62.663 60.000 0.00 0.00 35.63 3.27
233 234 1.226030 CTTCCCCGTCACCGACAAAC 61.226 60.000 0.00 0.00 35.63 2.93
234 235 1.070105 CTTCCCCGTCACCGACAAA 59.930 57.895 0.00 0.00 35.63 2.83
235 236 2.738480 CTTCCCCGTCACCGACAA 59.262 61.111 0.00 0.00 35.63 3.18
236 237 3.998672 GCTTCCCCGTCACCGACA 61.999 66.667 0.00 0.00 35.63 4.35
237 238 3.934391 CTGCTTCCCCGTCACCGAC 62.934 68.421 0.00 0.00 35.63 4.79
238 239 3.691342 CTGCTTCCCCGTCACCGA 61.691 66.667 0.00 0.00 35.63 4.69
239 240 3.649277 CTCTGCTTCCCCGTCACCG 62.649 68.421 0.00 0.00 0.00 4.94
240 241 2.266055 CTCTGCTTCCCCGTCACC 59.734 66.667 0.00 0.00 0.00 4.02
241 242 2.435059 GCTCTGCTTCCCCGTCAC 60.435 66.667 0.00 0.00 0.00 3.67
242 243 2.604686 AGCTCTGCTTCCCCGTCA 60.605 61.111 0.00 0.00 33.89 4.35
243 244 2.125350 CAGCTCTGCTTCCCCGTC 60.125 66.667 0.00 0.00 36.40 4.79
244 245 3.710722 CCAGCTCTGCTTCCCCGT 61.711 66.667 0.00 0.00 36.40 5.28
246 247 2.322638 CTAGCCAGCTCTGCTTCCCC 62.323 65.000 12.21 0.00 40.23 4.81
247 248 1.145819 CTAGCCAGCTCTGCTTCCC 59.854 63.158 12.21 0.00 40.23 3.97
248 249 0.758123 ATCTAGCCAGCTCTGCTTCC 59.242 55.000 12.21 0.00 40.23 3.46
249 250 1.138661 ACATCTAGCCAGCTCTGCTTC 59.861 52.381 12.21 0.00 40.23 3.86
250 251 1.134461 CACATCTAGCCAGCTCTGCTT 60.134 52.381 12.21 0.00 40.23 3.91
251 252 0.464870 CACATCTAGCCAGCTCTGCT 59.535 55.000 11.72 11.72 42.81 4.24
252 253 0.532417 CCACATCTAGCCAGCTCTGC 60.532 60.000 0.00 0.00 0.00 4.26
253 254 1.117994 TCCACATCTAGCCAGCTCTG 58.882 55.000 0.00 0.00 0.00 3.35
254 255 1.118838 GTCCACATCTAGCCAGCTCT 58.881 55.000 0.00 0.00 0.00 4.09
255 256 0.249238 CGTCCACATCTAGCCAGCTC 60.249 60.000 0.00 0.00 0.00 4.09
256 257 1.680522 CCGTCCACATCTAGCCAGCT 61.681 60.000 0.00 0.00 0.00 4.24
257 258 1.227380 CCGTCCACATCTAGCCAGC 60.227 63.158 0.00 0.00 0.00 4.85
258 259 1.227380 GCCGTCCACATCTAGCCAG 60.227 63.158 0.00 0.00 0.00 4.85
259 260 2.900273 GCCGTCCACATCTAGCCA 59.100 61.111 0.00 0.00 0.00 4.75
260 261 2.279517 CGCCGTCCACATCTAGCC 60.280 66.667 0.00 0.00 0.00 3.93
261 262 1.299468 CTCGCCGTCCACATCTAGC 60.299 63.158 0.00 0.00 0.00 3.42
262 263 0.456221 AACTCGCCGTCCACATCTAG 59.544 55.000 0.00 0.00 0.00 2.43
263 264 0.892755 AAACTCGCCGTCCACATCTA 59.107 50.000 0.00 0.00 0.00 1.98
264 265 0.670546 CAAACTCGCCGTCCACATCT 60.671 55.000 0.00 0.00 0.00 2.90
265 266 1.635663 CCAAACTCGCCGTCCACATC 61.636 60.000 0.00 0.00 0.00 3.06
266 267 1.671054 CCAAACTCGCCGTCCACAT 60.671 57.895 0.00 0.00 0.00 3.21
267 268 2.107041 ATCCAAACTCGCCGTCCACA 62.107 55.000 0.00 0.00 0.00 4.17
268 269 1.375523 ATCCAAACTCGCCGTCCAC 60.376 57.895 0.00 0.00 0.00 4.02
269 270 1.375396 CATCCAAACTCGCCGTCCA 60.375 57.895 0.00 0.00 0.00 4.02
270 271 1.079405 TCATCCAAACTCGCCGTCC 60.079 57.895 0.00 0.00 0.00 4.79
271 272 1.084370 CCTCATCCAAACTCGCCGTC 61.084 60.000 0.00 0.00 0.00 4.79
272 273 1.079127 CCTCATCCAAACTCGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
273 274 1.084370 GTCCTCATCCAAACTCGCCG 61.084 60.000 0.00 0.00 0.00 6.46
274 275 1.084370 CGTCCTCATCCAAACTCGCC 61.084 60.000 0.00 0.00 0.00 5.54
275 276 1.084370 CCGTCCTCATCCAAACTCGC 61.084 60.000 0.00 0.00 0.00 5.03
276 277 1.084370 GCCGTCCTCATCCAAACTCG 61.084 60.000 0.00 0.00 0.00 4.18
277 278 0.744771 GGCCGTCCTCATCCAAACTC 60.745 60.000 0.00 0.00 0.00 3.01
278 279 1.299976 GGCCGTCCTCATCCAAACT 59.700 57.895 0.00 0.00 0.00 2.66
279 280 1.749258 GGGCCGTCCTCATCCAAAC 60.749 63.158 0.00 0.00 0.00 2.93
280 281 2.674754 GGGCCGTCCTCATCCAAA 59.325 61.111 0.00 0.00 0.00 3.28
281 282 3.407967 GGGGCCGTCCTCATCCAA 61.408 66.667 0.00 0.00 35.33 3.53
300 301 0.030908 TTTTTAAGCCAACCGTGCGG 59.969 50.000 9.29 9.29 42.03 5.69
301 302 3.553597 TTTTTAAGCCAACCGTGCG 57.446 47.368 0.00 0.00 0.00 5.34
342 343 2.806503 TTTATGACCACGGGCCCACG 62.807 60.000 24.92 12.02 40.31 4.94
343 344 0.395173 ATTTATGACCACGGGCCCAC 60.395 55.000 24.92 7.77 0.00 4.61
344 345 0.333312 AATTTATGACCACGGGCCCA 59.667 50.000 24.92 0.00 0.00 5.36
345 346 2.351706 TAATTTATGACCACGGGCCC 57.648 50.000 13.57 13.57 0.00 5.80
346 347 2.034179 GCTTAATTTATGACCACGGGCC 59.966 50.000 0.00 0.00 0.00 5.80
347 348 2.949644 AGCTTAATTTATGACCACGGGC 59.050 45.455 0.00 0.00 0.00 6.13
348 349 4.196193 TCAGCTTAATTTATGACCACGGG 58.804 43.478 0.00 0.00 0.00 5.28
349 350 5.333339 CGATCAGCTTAATTTATGACCACGG 60.333 44.000 0.00 0.00 0.00 4.94
350 351 5.670097 CGATCAGCTTAATTTATGACCACG 58.330 41.667 0.00 0.00 0.00 4.94
351 352 5.444122 GCGATCAGCTTAATTTATGACCAC 58.556 41.667 0.00 0.00 44.04 4.16
352 353 4.211164 CGCGATCAGCTTAATTTATGACCA 59.789 41.667 0.00 0.00 45.59 4.02
353 354 4.211374 ACGCGATCAGCTTAATTTATGACC 59.789 41.667 15.93 0.00 45.59 4.02
354 355 5.051039 TCACGCGATCAGCTTAATTTATGAC 60.051 40.000 15.93 0.00 45.59 3.06
355 356 5.047188 TCACGCGATCAGCTTAATTTATGA 58.953 37.500 15.93 0.00 45.59 2.15
356 357 5.328886 TCACGCGATCAGCTTAATTTATG 57.671 39.130 15.93 0.00 45.59 1.90
357 358 5.466728 ACATCACGCGATCAGCTTAATTTAT 59.533 36.000 15.93 0.00 45.59 1.40
358 359 4.808895 ACATCACGCGATCAGCTTAATTTA 59.191 37.500 15.93 0.00 45.59 1.40
359 360 3.623060 ACATCACGCGATCAGCTTAATTT 59.377 39.130 15.93 0.00 45.59 1.82
360 361 3.198068 ACATCACGCGATCAGCTTAATT 58.802 40.909 15.93 0.00 45.59 1.40
361 362 2.826428 ACATCACGCGATCAGCTTAAT 58.174 42.857 15.93 0.00 45.59 1.40
362 363 2.293677 ACATCACGCGATCAGCTTAA 57.706 45.000 15.93 0.00 45.59 1.85
363 364 3.643159 ATACATCACGCGATCAGCTTA 57.357 42.857 15.93 0.00 45.59 3.09
364 365 2.515926 ATACATCACGCGATCAGCTT 57.484 45.000 15.93 0.00 45.59 3.74
365 366 2.130395 CAATACATCACGCGATCAGCT 58.870 47.619 15.93 0.00 45.59 4.24
366 367 2.127251 TCAATACATCACGCGATCAGC 58.873 47.619 15.93 0.00 43.95 4.26
367 368 4.979564 ATTCAATACATCACGCGATCAG 57.020 40.909 15.93 1.96 0.00 2.90
368 369 4.024977 CCAATTCAATACATCACGCGATCA 60.025 41.667 15.93 0.00 0.00 2.92
369 370 4.024893 ACCAATTCAATACATCACGCGATC 60.025 41.667 15.93 0.00 0.00 3.69
370 371 3.876914 ACCAATTCAATACATCACGCGAT 59.123 39.130 15.93 0.00 0.00 4.58
371 372 3.266636 ACCAATTCAATACATCACGCGA 58.733 40.909 15.93 0.00 0.00 5.87
372 373 3.673746 ACCAATTCAATACATCACGCG 57.326 42.857 3.53 3.53 0.00 6.01
373 374 9.117145 CATTAATACCAATTCAATACATCACGC 57.883 33.333 0.00 0.00 0.00 5.34
402 403 8.040727 GGCCTCCTACATTTGACAAAATTTATT 58.959 33.333 4.41 0.00 33.59 1.40
403 404 7.555965 GGCCTCCTACATTTGACAAAATTTAT 58.444 34.615 4.41 0.00 33.59 1.40
405 406 5.566627 CGGCCTCCTACATTTGACAAAATTT 60.567 40.000 4.41 0.00 33.59 1.82
406 407 4.082245 CGGCCTCCTACATTTGACAAAATT 60.082 41.667 4.41 0.00 33.59 1.82
407 408 3.443681 CGGCCTCCTACATTTGACAAAAT 59.556 43.478 4.41 0.00 36.39 1.82
420 421 2.050350 CGTCCTTGTCGGCCTCCTA 61.050 63.158 0.00 0.00 0.00 2.94
423 424 3.379445 TCCGTCCTTGTCGGCCTC 61.379 66.667 0.00 0.00 46.49 4.70
424 425 3.692406 GTCCGTCCTTGTCGGCCT 61.692 66.667 0.00 0.00 46.49 5.19
426 427 3.853597 AACGTCCGTCCTTGTCGGC 62.854 63.158 0.00 0.00 46.49 5.54
428 429 0.595567 TCAAACGTCCGTCCTTGTCG 60.596 55.000 0.00 0.00 0.00 4.35
430 431 1.508632 CATCAAACGTCCGTCCTTGT 58.491 50.000 0.00 0.00 0.00 3.16
442 443 1.243902 TTCAACCGGAGCCATCAAAC 58.756 50.000 9.46 0.00 0.00 2.93
450 451 2.044946 AGGCCATTCAACCGGAGC 60.045 61.111 9.46 0.00 0.00 4.70
470 471 3.760684 GGAAGATGGATAATGGACATGGC 59.239 47.826 0.00 0.00 0.00 4.40
472 473 4.692625 GTCGGAAGATGGATAATGGACATG 59.307 45.833 0.00 0.00 45.19 3.21
473 474 4.594920 AGTCGGAAGATGGATAATGGACAT 59.405 41.667 0.00 0.00 45.19 3.06
474 475 3.967326 AGTCGGAAGATGGATAATGGACA 59.033 43.478 0.00 0.00 45.19 4.02
476 477 3.967326 ACAGTCGGAAGATGGATAATGGA 59.033 43.478 0.00 0.00 45.19 3.41
477 478 4.342862 ACAGTCGGAAGATGGATAATGG 57.657 45.455 0.00 0.00 45.19 3.16
481 482 4.466370 ACAGAAACAGTCGGAAGATGGATA 59.534 41.667 0.00 0.00 45.19 2.59
488 489 6.727824 AATATTCACAGAAACAGTCGGAAG 57.272 37.500 0.00 0.00 0.00 3.46
489 490 6.708502 TCAAATATTCACAGAAACAGTCGGAA 59.291 34.615 0.00 0.00 0.00 4.30
490 491 6.227522 TCAAATATTCACAGAAACAGTCGGA 58.772 36.000 0.00 0.00 0.00 4.55
491 492 6.480524 TCAAATATTCACAGAAACAGTCGG 57.519 37.500 0.00 0.00 0.00 4.79
544 545 3.909732 ACTGGGAATGAAAACTCCAACA 58.090 40.909 0.00 0.00 32.95 3.33
589 591 0.682209 GGCTGTGTCCGGGAGTACTA 60.682 60.000 0.00 0.00 0.00 1.82
590 592 1.982938 GGCTGTGTCCGGGAGTACT 60.983 63.158 0.00 0.00 0.00 2.73
591 593 1.614241 ATGGCTGTGTCCGGGAGTAC 61.614 60.000 0.00 0.17 0.00 2.73
602 604 2.044650 CTGGGACCCATGGCTGTG 60.045 66.667 15.39 0.00 30.82 3.66
611 613 1.931635 TAATTTTGGCACTGGGACCC 58.068 50.000 2.45 2.45 0.00 4.46
652 663 2.048498 GTTTTCCGATTTCGCGCTTTT 58.952 42.857 5.56 0.00 38.18 2.27
796 809 2.522638 CGTTCGGCGCTATTGGACC 61.523 63.158 7.64 0.00 0.00 4.46
819 832 0.665068 TCGGTGATGTTGAACGGTCG 60.665 55.000 0.00 0.00 0.00 4.79
846 861 0.322546 GATTGGTGGAGGGGTGTGTC 60.323 60.000 0.00 0.00 0.00 3.67
892 907 3.083349 CAGAGCGGGGGTGATGGA 61.083 66.667 0.00 0.00 0.00 3.41
968 991 2.125225 GGGGAGAAGGGAGGGTGT 59.875 66.667 0.00 0.00 0.00 4.16
1086 1127 3.717294 GCCCTCGGCTTCTTCCCA 61.717 66.667 0.00 0.00 46.69 4.37
1233 1295 0.687427 TGGAGGAGATGCCGATGTCA 60.687 55.000 0.00 0.00 43.43 3.58
1446 1508 2.492012 GACGCGATCTAAGAGGAGGTA 58.508 52.381 15.93 0.00 0.00 3.08
1461 1523 0.863799 TACTAGATACAGGCGACGCG 59.136 55.000 14.61 3.53 0.00 6.01
1573 1635 5.238868 CCAACAAACCATTTGCAATGATTCA 59.761 36.000 0.00 0.00 44.39 2.57
1589 1651 4.319249 GCCAACGAGCCAACAAAC 57.681 55.556 0.00 0.00 0.00 2.93
1603 1665 1.529010 CACTTCTTGCAGGTGGCCA 60.529 57.895 0.00 0.00 43.89 5.36
1619 1681 1.204941 AGACCAGCGGACATAACTCAC 59.795 52.381 1.50 0.00 0.00 3.51
1623 1685 3.131396 CCAATAGACCAGCGGACATAAC 58.869 50.000 1.50 0.00 0.00 1.89
1635 1697 5.506317 CGAAATCTTCATTGGCCAATAGACC 60.506 44.000 30.19 19.09 0.00 3.85
1636 1698 5.506317 CCGAAATCTTCATTGGCCAATAGAC 60.506 44.000 30.19 16.39 0.00 2.59
1639 1701 4.531854 TCCGAAATCTTCATTGGCCAATA 58.468 39.130 30.19 15.75 0.00 1.90
1646 1708 7.169645 ACAACATTGTTTCCGAAATCTTCATTG 59.830 33.333 0.00 0.91 38.47 2.82
1672 1734 7.360861 CGAAATCAGTAAATAGAACCAGCAACA 60.361 37.037 0.00 0.00 0.00 3.33
1677 1739 5.276868 CGCCGAAATCAGTAAATAGAACCAG 60.277 44.000 0.00 0.00 0.00 4.00
1698 1762 2.949644 AGGCATTAAGTAAATCACCGCC 59.050 45.455 0.00 0.00 34.57 6.13
1759 1827 1.106285 GGGGCAGGAATTGTAAGCAG 58.894 55.000 0.00 0.00 0.00 4.24
1838 1906 1.287425 CGAGGCAATTAAGACCGACC 58.713 55.000 0.00 0.00 0.00 4.79
1913 2010 6.752168 AGTACCATACGTAACAAGAACAAGT 58.248 36.000 0.00 0.00 0.00 3.16
1923 2020 6.199719 GCAATGTTAGGAGTACCATACGTAAC 59.800 42.308 0.00 0.00 38.94 2.50
1933 2030 2.683362 GCCAAGGCAATGTTAGGAGTAC 59.317 50.000 6.14 0.00 41.49 2.73
1953 2050 2.992543 TGTTCTTGCAACAAACAAGTGC 59.007 40.909 16.46 0.00 43.97 4.40
1958 2055 4.511617 TCACTTGTTCTTGCAACAAACA 57.488 36.364 15.33 15.33 39.36 2.83
1967 2064 7.916977 TCTGAAACAAATCATCACTTGTTCTTG 59.083 33.333 1.05 0.00 43.25 3.02
1992 2092 2.600867 GCATCAGTACGAAAGCTCAGTC 59.399 50.000 0.00 0.00 0.00 3.51
1997 2097 3.338249 ACATTGCATCAGTACGAAAGCT 58.662 40.909 0.00 0.00 31.82 3.74
2044 2144 1.946768 GCACCTGCAACTACAAGAACA 59.053 47.619 0.00 0.00 41.59 3.18
2069 2169 0.603707 TAGCACACAGGAGCACTTGC 60.604 55.000 0.00 0.00 42.49 4.01
2087 2187 2.093890 TCCACCGAGCAGTTACGATTA 58.906 47.619 0.00 0.00 0.00 1.75
2096 2196 0.392193 AGAGCATTTCCACCGAGCAG 60.392 55.000 0.00 0.00 0.00 4.24
2117 2217 3.206150 ACACATTCACAGACCTGAACAC 58.794 45.455 3.76 0.00 32.95 3.32
2123 2223 5.290493 TGACTTAACACATTCACAGACCT 57.710 39.130 0.00 0.00 0.00 3.85
2168 2272 6.730960 TTATAATATAAAGCGGGGCGAAAG 57.269 37.500 0.00 0.00 0.00 2.62
2169 2273 6.348704 GCTTTATAATATAAAGCGGGGCGAAA 60.349 38.462 30.20 0.57 46.31 3.46
2170 2274 5.122711 GCTTTATAATATAAAGCGGGGCGAA 59.877 40.000 30.20 0.00 46.31 4.70
2171 2275 4.632688 GCTTTATAATATAAAGCGGGGCGA 59.367 41.667 30.20 0.05 46.31 5.54
2172 2276 4.905269 GCTTTATAATATAAAGCGGGGCG 58.095 43.478 30.20 10.34 46.31 6.13
2181 2285 9.616156 TCTTGGACGGTTTGCTTTATAATATAA 57.384 29.630 0.00 0.00 0.00 0.98
2182 2286 9.048446 GTCTTGGACGGTTTGCTTTATAATATA 57.952 33.333 0.00 0.00 0.00 0.86
2183 2287 7.554835 TGTCTTGGACGGTTTGCTTTATAATAT 59.445 33.333 0.00 0.00 34.95 1.28
2184 2288 6.879993 TGTCTTGGACGGTTTGCTTTATAATA 59.120 34.615 0.00 0.00 34.95 0.98
2185 2289 5.708230 TGTCTTGGACGGTTTGCTTTATAAT 59.292 36.000 0.00 0.00 34.95 1.28
2186 2290 5.064558 TGTCTTGGACGGTTTGCTTTATAA 58.935 37.500 0.00 0.00 34.95 0.98
2187 2291 4.643463 TGTCTTGGACGGTTTGCTTTATA 58.357 39.130 0.00 0.00 34.95 0.98
2188 2292 3.482436 TGTCTTGGACGGTTTGCTTTAT 58.518 40.909 0.00 0.00 34.95 1.40
2189 2293 2.875933 CTGTCTTGGACGGTTTGCTTTA 59.124 45.455 0.00 0.00 34.54 1.85
2190 2294 1.676006 CTGTCTTGGACGGTTTGCTTT 59.324 47.619 0.00 0.00 34.54 3.51
2191 2295 1.308998 CTGTCTTGGACGGTTTGCTT 58.691 50.000 0.00 0.00 34.54 3.91
2192 2296 3.006672 CTGTCTTGGACGGTTTGCT 57.993 52.632 0.00 0.00 34.54 3.91
2198 2302 2.028476 TGTTGGATACTGTCTTGGACGG 60.028 50.000 5.12 5.12 43.83 4.79
2199 2303 3.313012 TGTTGGATACTGTCTTGGACG 57.687 47.619 0.00 0.00 34.95 4.79
2200 2304 5.063880 ACTTTGTTGGATACTGTCTTGGAC 58.936 41.667 0.00 0.00 37.61 4.02
2201 2305 5.304686 ACTTTGTTGGATACTGTCTTGGA 57.695 39.130 0.00 0.00 37.61 3.53
2202 2306 5.530915 TGAACTTTGTTGGATACTGTCTTGG 59.469 40.000 0.00 0.00 37.61 3.61
2203 2307 6.038161 TGTGAACTTTGTTGGATACTGTCTTG 59.962 38.462 0.00 0.00 37.61 3.02
2204 2308 6.038271 GTGTGAACTTTGTTGGATACTGTCTT 59.962 38.462 0.00 0.00 37.61 3.01
2205 2309 5.527582 GTGTGAACTTTGTTGGATACTGTCT 59.472 40.000 0.00 0.00 37.61 3.41
2206 2310 5.295787 TGTGTGAACTTTGTTGGATACTGTC 59.704 40.000 0.00 0.00 37.61 3.51
2207 2311 5.065988 GTGTGTGAACTTTGTTGGATACTGT 59.934 40.000 0.00 0.00 37.61 3.55
2208 2312 5.065859 TGTGTGTGAACTTTGTTGGATACTG 59.934 40.000 0.00 0.00 37.61 2.74
2209 2313 5.065988 GTGTGTGTGAACTTTGTTGGATACT 59.934 40.000 0.00 0.00 37.61 2.12
2210 2314 5.270853 GTGTGTGTGAACTTTGTTGGATAC 58.729 41.667 0.00 0.00 0.00 2.24
2211 2315 4.034626 CGTGTGTGTGAACTTTGTTGGATA 59.965 41.667 0.00 0.00 0.00 2.59
2212 2316 3.181501 CGTGTGTGTGAACTTTGTTGGAT 60.182 43.478 0.00 0.00 0.00 3.41
2213 2317 2.160615 CGTGTGTGTGAACTTTGTTGGA 59.839 45.455 0.00 0.00 0.00 3.53
2214 2318 2.514902 CGTGTGTGTGAACTTTGTTGG 58.485 47.619 0.00 0.00 0.00 3.77
2215 2319 1.910819 GCGTGTGTGTGAACTTTGTTG 59.089 47.619 0.00 0.00 0.00 3.33
2216 2320 1.537638 TGCGTGTGTGTGAACTTTGTT 59.462 42.857 0.00 0.00 0.00 2.83
2217 2321 1.135803 GTGCGTGTGTGTGAACTTTGT 60.136 47.619 0.00 0.00 0.00 2.83
2218 2322 1.135831 TGTGCGTGTGTGTGAACTTTG 60.136 47.619 0.00 0.00 0.00 2.77
2219 2323 1.135803 GTGTGCGTGTGTGTGAACTTT 60.136 47.619 0.00 0.00 0.00 2.66
2220 2324 0.446222 GTGTGCGTGTGTGTGAACTT 59.554 50.000 0.00 0.00 0.00 2.66
2221 2325 0.672091 TGTGTGCGTGTGTGTGAACT 60.672 50.000 0.00 0.00 0.00 3.01
2222 2326 0.167033 TTGTGTGCGTGTGTGTGAAC 59.833 50.000 0.00 0.00 0.00 3.18
2223 2327 0.445829 CTTGTGTGCGTGTGTGTGAA 59.554 50.000 0.00 0.00 0.00 3.18
2224 2328 0.672091 ACTTGTGTGCGTGTGTGTGA 60.672 50.000 0.00 0.00 0.00 3.58
2225 2329 0.247655 GACTTGTGTGCGTGTGTGTG 60.248 55.000 0.00 0.00 0.00 3.82
2226 2330 0.391130 AGACTTGTGTGCGTGTGTGT 60.391 50.000 0.00 0.00 0.00 3.72
2227 2331 0.301687 GAGACTTGTGTGCGTGTGTG 59.698 55.000 0.00 0.00 0.00 3.82
2228 2332 1.145759 CGAGACTTGTGTGCGTGTGT 61.146 55.000 0.00 0.00 0.00 3.72
2229 2333 1.559814 CGAGACTTGTGTGCGTGTG 59.440 57.895 0.00 0.00 0.00 3.82
2230 2334 2.237751 GCGAGACTTGTGTGCGTGT 61.238 57.895 0.00 0.00 0.00 4.49
2231 2335 2.237066 TGCGAGACTTGTGTGCGTG 61.237 57.895 0.00 0.00 0.00 5.34
2232 2336 2.106131 TGCGAGACTTGTGTGCGT 59.894 55.556 0.00 0.00 0.00 5.24
2233 2337 1.761244 TTGTGCGAGACTTGTGTGCG 61.761 55.000 0.00 0.00 0.00 5.34
2234 2338 0.316196 GTTGTGCGAGACTTGTGTGC 60.316 55.000 0.00 0.00 0.00 4.57
2235 2339 0.304705 GGTTGTGCGAGACTTGTGTG 59.695 55.000 0.00 0.00 0.00 3.82
2236 2340 0.107897 TGGTTGTGCGAGACTTGTGT 60.108 50.000 0.00 0.00 0.00 3.72
2237 2341 0.304705 GTGGTTGTGCGAGACTTGTG 59.695 55.000 0.00 0.00 0.00 3.33
2238 2342 0.107897 TGTGGTTGTGCGAGACTTGT 60.108 50.000 0.00 0.00 0.00 3.16
2239 2343 1.003545 CTTGTGGTTGTGCGAGACTTG 60.004 52.381 0.00 0.00 0.00 3.16
2240 2344 1.299541 CTTGTGGTTGTGCGAGACTT 58.700 50.000 0.00 0.00 0.00 3.01
2241 2345 0.178068 ACTTGTGGTTGTGCGAGACT 59.822 50.000 0.00 0.00 0.00 3.24
2242 2346 1.525619 GTACTTGTGGTTGTGCGAGAC 59.474 52.381 0.00 0.00 0.00 3.36
2243 2347 1.137282 TGTACTTGTGGTTGTGCGAGA 59.863 47.619 0.00 0.00 0.00 4.04
2244 2348 1.577468 TGTACTTGTGGTTGTGCGAG 58.423 50.000 0.00 0.00 0.00 5.03
2245 2349 2.248280 ATGTACTTGTGGTTGTGCGA 57.752 45.000 0.00 0.00 0.00 5.10
2246 2350 4.475763 TTTATGTACTTGTGGTTGTGCG 57.524 40.909 0.00 0.00 0.00 5.34
2247 2351 5.219633 CCTTTTATGTACTTGTGGTTGTGC 58.780 41.667 0.00 0.00 0.00 4.57
2248 2352 5.300792 ACCCTTTTATGTACTTGTGGTTGTG 59.699 40.000 0.00 0.00 0.00 3.33
2249 2353 5.451354 ACCCTTTTATGTACTTGTGGTTGT 58.549 37.500 0.00 0.00 0.00 3.32
2250 2354 6.399639 AACCCTTTTATGTACTTGTGGTTG 57.600 37.500 0.00 0.00 32.65 3.77
2251 2355 8.581578 CATTAACCCTTTTATGTACTTGTGGTT 58.418 33.333 0.00 0.00 37.36 3.67
2252 2356 7.309560 GCATTAACCCTTTTATGTACTTGTGGT 60.310 37.037 0.00 0.00 0.00 4.16
2253 2357 7.033185 GCATTAACCCTTTTATGTACTTGTGG 58.967 38.462 0.00 0.00 0.00 4.17
2254 2358 7.754924 CAGCATTAACCCTTTTATGTACTTGTG 59.245 37.037 0.00 0.00 0.00 3.33
2255 2359 7.668052 TCAGCATTAACCCTTTTATGTACTTGT 59.332 33.333 0.00 0.00 0.00 3.16
2256 2360 8.050778 TCAGCATTAACCCTTTTATGTACTTG 57.949 34.615 0.00 0.00 0.00 3.16
2257 2361 7.339466 CCTCAGCATTAACCCTTTTATGTACTT 59.661 37.037 0.00 0.00 0.00 2.24
2258 2362 6.828785 CCTCAGCATTAACCCTTTTATGTACT 59.171 38.462 0.00 0.00 0.00 2.73
2259 2363 6.039382 CCCTCAGCATTAACCCTTTTATGTAC 59.961 42.308 0.00 0.00 0.00 2.90
2260 2364 6.126409 CCCTCAGCATTAACCCTTTTATGTA 58.874 40.000 0.00 0.00 0.00 2.29
2261 2365 4.956075 CCCTCAGCATTAACCCTTTTATGT 59.044 41.667 0.00 0.00 0.00 2.29
2262 2366 4.202151 GCCCTCAGCATTAACCCTTTTATG 60.202 45.833 0.00 0.00 42.97 1.90
2263 2367 3.960755 GCCCTCAGCATTAACCCTTTTAT 59.039 43.478 0.00 0.00 42.97 1.40
2264 2368 3.361786 GCCCTCAGCATTAACCCTTTTA 58.638 45.455 0.00 0.00 42.97 1.52
2265 2369 2.179427 GCCCTCAGCATTAACCCTTTT 58.821 47.619 0.00 0.00 42.97 2.27
2266 2370 1.852633 GCCCTCAGCATTAACCCTTT 58.147 50.000 0.00 0.00 42.97 3.11
2267 2371 3.596362 GCCCTCAGCATTAACCCTT 57.404 52.632 0.00 0.00 42.97 3.95
2277 2381 0.819259 TGTTGAGTTGTGCCCTCAGC 60.819 55.000 0.00 0.00 39.91 4.26
2278 2382 1.605710 CTTGTTGAGTTGTGCCCTCAG 59.394 52.381 0.00 0.00 39.91 3.35
2279 2383 1.064758 ACTTGTTGAGTTGTGCCCTCA 60.065 47.619 0.00 0.00 33.92 3.86
2280 2384 1.604278 GACTTGTTGAGTTGTGCCCTC 59.396 52.381 0.00 0.00 39.19 4.30
2281 2385 1.680338 GACTTGTTGAGTTGTGCCCT 58.320 50.000 0.00 0.00 39.19 5.19
2282 2386 0.668535 GGACTTGTTGAGTTGTGCCC 59.331 55.000 0.00 0.00 39.19 5.36
2283 2387 1.334869 CAGGACTTGTTGAGTTGTGCC 59.665 52.381 0.00 0.00 39.19 5.01
2284 2388 1.334869 CCAGGACTTGTTGAGTTGTGC 59.665 52.381 0.00 0.00 39.19 4.57
2285 2389 2.917933 TCCAGGACTTGTTGAGTTGTG 58.082 47.619 0.00 0.00 39.19 3.33
2286 2390 3.644966 TTCCAGGACTTGTTGAGTTGT 57.355 42.857 0.00 0.00 39.19 3.32
2287 2391 3.694072 TGTTTCCAGGACTTGTTGAGTTG 59.306 43.478 0.00 0.00 39.19 3.16
2288 2392 3.947834 CTGTTTCCAGGACTTGTTGAGTT 59.052 43.478 0.00 0.00 39.19 3.01
2289 2393 3.199946 TCTGTTTCCAGGACTTGTTGAGT 59.800 43.478 0.00 0.00 39.31 3.41
2290 2394 3.808728 TCTGTTTCCAGGACTTGTTGAG 58.191 45.455 0.00 0.00 39.31 3.02
2291 2395 3.924114 TCTGTTTCCAGGACTTGTTGA 57.076 42.857 0.00 0.00 39.31 3.18
2292 2396 4.981806 TTTCTGTTTCCAGGACTTGTTG 57.018 40.909 0.00 0.00 39.31 3.33
2293 2397 5.993748 TTTTTCTGTTTCCAGGACTTGTT 57.006 34.783 0.00 0.00 39.31 2.83
2312 2416 0.601057 GGCGTGTGGGTGCTATTTTT 59.399 50.000 0.00 0.00 0.00 1.94
2313 2417 0.251165 AGGCGTGTGGGTGCTATTTT 60.251 50.000 0.00 0.00 0.00 1.82
2314 2418 0.616371 TAGGCGTGTGGGTGCTATTT 59.384 50.000 0.00 0.00 0.00 1.40
2315 2419 0.107848 GTAGGCGTGTGGGTGCTATT 60.108 55.000 0.00 0.00 0.00 1.73
2316 2420 1.261938 TGTAGGCGTGTGGGTGCTAT 61.262 55.000 0.00 0.00 0.00 2.97
2317 2421 1.909287 TGTAGGCGTGTGGGTGCTA 60.909 57.895 0.00 0.00 0.00 3.49
2318 2422 3.238497 TGTAGGCGTGTGGGTGCT 61.238 61.111 0.00 0.00 0.00 4.40
2319 2423 3.047877 GTGTAGGCGTGTGGGTGC 61.048 66.667 0.00 0.00 0.00 5.01
2320 2424 2.358247 GGTGTAGGCGTGTGGGTG 60.358 66.667 0.00 0.00 0.00 4.61
2321 2425 3.633116 GGGTGTAGGCGTGTGGGT 61.633 66.667 0.00 0.00 0.00 4.51
2322 2426 3.605749 CTGGGTGTAGGCGTGTGGG 62.606 68.421 0.00 0.00 0.00 4.61
2323 2427 2.047274 CTGGGTGTAGGCGTGTGG 60.047 66.667 0.00 0.00 0.00 4.17
2324 2428 2.742372 GCTGGGTGTAGGCGTGTG 60.742 66.667 0.00 0.00 0.00 3.82
2325 2429 2.813726 TTGCTGGGTGTAGGCGTGT 61.814 57.895 0.00 0.00 0.00 4.49
2326 2430 2.031919 TTGCTGGGTGTAGGCGTG 59.968 61.111 0.00 0.00 0.00 5.34
2327 2431 2.032071 GTTGCTGGGTGTAGGCGT 59.968 61.111 0.00 0.00 0.00 5.68
2328 2432 2.031919 TGTTGCTGGGTGTAGGCG 59.968 61.111 0.00 0.00 0.00 5.52
2329 2433 2.325082 CGTGTTGCTGGGTGTAGGC 61.325 63.158 0.00 0.00 0.00 3.93
2330 2434 0.250124 TTCGTGTTGCTGGGTGTAGG 60.250 55.000 0.00 0.00 0.00 3.18
2331 2435 0.865769 GTTCGTGTTGCTGGGTGTAG 59.134 55.000 0.00 0.00 0.00 2.74
2332 2436 0.466543 AGTTCGTGTTGCTGGGTGTA 59.533 50.000 0.00 0.00 0.00 2.90
2333 2437 0.814010 GAGTTCGTGTTGCTGGGTGT 60.814 55.000 0.00 0.00 0.00 4.16
2334 2438 0.813610 TGAGTTCGTGTTGCTGGGTG 60.814 55.000 0.00 0.00 0.00 4.61
2335 2439 0.107410 TTGAGTTCGTGTTGCTGGGT 60.107 50.000 0.00 0.00 0.00 4.51
2336 2440 1.197721 GATTGAGTTCGTGTTGCTGGG 59.802 52.381 0.00 0.00 0.00 4.45
2337 2441 1.136252 CGATTGAGTTCGTGTTGCTGG 60.136 52.381 0.00 0.00 34.46 4.85
2338 2442 1.136252 CCGATTGAGTTCGTGTTGCTG 60.136 52.381 0.00 0.00 37.42 4.41
2339 2443 1.148310 CCGATTGAGTTCGTGTTGCT 58.852 50.000 0.00 0.00 37.42 3.91
2340 2444 0.165944 CCCGATTGAGTTCGTGTTGC 59.834 55.000 0.00 0.00 37.42 4.17
2341 2445 0.165944 GCCCGATTGAGTTCGTGTTG 59.834 55.000 0.00 0.00 37.42 3.33
2342 2446 0.034896 AGCCCGATTGAGTTCGTGTT 59.965 50.000 0.00 0.00 37.42 3.32
2343 2447 0.389948 GAGCCCGATTGAGTTCGTGT 60.390 55.000 0.00 0.00 37.42 4.49
2344 2448 1.084370 GGAGCCCGATTGAGTTCGTG 61.084 60.000 0.00 0.00 37.42 4.35
2345 2449 1.218316 GGAGCCCGATTGAGTTCGT 59.782 57.895 0.00 0.00 37.42 3.85
2346 2450 4.110493 GGAGCCCGATTGAGTTCG 57.890 61.111 0.00 0.00 38.83 3.95
2359 2463 3.787001 CACCCCCTTCTCCGGAGC 61.787 72.222 27.39 0.00 0.00 4.70
2360 2464 3.083997 CCACCCCCTTCTCCGGAG 61.084 72.222 26.32 26.32 0.00 4.63
2394 2498 4.847516 TCGCTCGATTGCCGTCCG 62.848 66.667 0.00 0.00 39.75 4.79
2395 2499 2.508439 TTCGCTCGATTGCCGTCC 60.508 61.111 0.00 0.00 39.75 4.79
2396 2500 2.517450 CCTTCGCTCGATTGCCGTC 61.517 63.158 0.00 0.00 39.75 4.79
2397 2501 2.509336 CCTTCGCTCGATTGCCGT 60.509 61.111 0.00 0.00 39.75 5.68
2398 2502 2.509336 ACCTTCGCTCGATTGCCG 60.509 61.111 0.00 0.00 40.25 5.69
2399 2503 2.517450 CGACCTTCGCTCGATTGCC 61.517 63.158 0.00 0.00 32.65 4.52
2400 2504 2.517450 CCGACCTTCGCTCGATTGC 61.517 63.158 0.00 0.00 38.82 3.56
2401 2505 1.153823 ACCGACCTTCGCTCGATTG 60.154 57.895 0.00 0.00 38.82 2.67
2402 2506 1.153823 CACCGACCTTCGCTCGATT 60.154 57.895 0.00 0.00 38.82 3.34
2403 2507 1.384989 ATCACCGACCTTCGCTCGAT 61.385 55.000 0.00 0.00 38.82 3.59
2404 2508 2.044555 ATCACCGACCTTCGCTCGA 61.045 57.895 0.00 0.00 38.82 4.04
2405 2509 1.874019 CATCACCGACCTTCGCTCG 60.874 63.158 0.00 0.00 38.82 5.03
2406 2510 0.526524 CTCATCACCGACCTTCGCTC 60.527 60.000 0.00 0.00 38.82 5.03
2407 2511 1.513158 CTCATCACCGACCTTCGCT 59.487 57.895 0.00 0.00 38.82 4.93
2408 2512 1.519455 CCTCATCACCGACCTTCGC 60.519 63.158 0.00 0.00 38.82 4.70
2409 2513 1.141881 CCCTCATCACCGACCTTCG 59.858 63.158 0.00 0.00 40.07 3.79
2410 2514 0.108138 CACCCTCATCACCGACCTTC 60.108 60.000 0.00 0.00 0.00 3.46
2411 2515 0.836400 ACACCCTCATCACCGACCTT 60.836 55.000 0.00 0.00 0.00 3.50
2412 2516 0.836400 AACACCCTCATCACCGACCT 60.836 55.000 0.00 0.00 0.00 3.85
2413 2517 0.673644 CAACACCCTCATCACCGACC 60.674 60.000 0.00 0.00 0.00 4.79
2414 2518 0.320374 TCAACACCCTCATCACCGAC 59.680 55.000 0.00 0.00 0.00 4.79
2415 2519 1.066215 CATCAACACCCTCATCACCGA 60.066 52.381 0.00 0.00 0.00 4.69
2416 2520 1.372582 CATCAACACCCTCATCACCG 58.627 55.000 0.00 0.00 0.00 4.94
2417 2521 1.755179 CCATCAACACCCTCATCACC 58.245 55.000 0.00 0.00 0.00 4.02
2418 2522 1.098050 GCCATCAACACCCTCATCAC 58.902 55.000 0.00 0.00 0.00 3.06
2419 2523 0.392863 CGCCATCAACACCCTCATCA 60.393 55.000 0.00 0.00 0.00 3.07
2420 2524 0.392998 ACGCCATCAACACCCTCATC 60.393 55.000 0.00 0.00 0.00 2.92
2421 2525 0.392998 GACGCCATCAACACCCTCAT 60.393 55.000 0.00 0.00 0.00 2.90
2422 2526 1.003839 GACGCCATCAACACCCTCA 60.004 57.895 0.00 0.00 0.00 3.86
2423 2527 1.745489 GGACGCCATCAACACCCTC 60.745 63.158 0.00 0.00 0.00 4.30
2424 2528 2.351276 GGACGCCATCAACACCCT 59.649 61.111 0.00 0.00 0.00 4.34
2425 2529 2.750237 GGGACGCCATCAACACCC 60.750 66.667 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.