Multiple sequence alignment - TraesCS2A01G312300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G312300 chr2A 100.000 3624 0 0 1 3624 536628298 536624675 0.000000e+00 6693.0
1 TraesCS2A01G312300 chr2A 97.778 270 6 0 1 270 536641412 536641143 1.970000e-127 466.0
2 TraesCS2A01G312300 chr2A 100.000 31 0 0 455 485 667649539 667649569 1.410000e-04 58.4
3 TraesCS2A01G312300 chr2D 93.592 1982 89 20 502 2477 398784131 398782182 0.000000e+00 2922.0
4 TraesCS2A01G312300 chr2D 86.372 1108 93 39 2555 3624 398782147 398781060 0.000000e+00 1157.0
5 TraesCS2A01G312300 chr2D 95.833 264 11 0 1230 1493 642836772 642837035 9.300000e-116 427.0
6 TraesCS2A01G312300 chr2D 95.455 264 12 0 1230 1493 585381610 585381873 4.330000e-114 422.0
7 TraesCS2A01G312300 chr2D 94.737 152 4 4 994 1145 585381467 585381614 2.180000e-57 233.0
8 TraesCS2A01G312300 chr2D 92.857 154 6 4 994 1145 642836626 642836776 6.090000e-53 219.0
9 TraesCS2A01G312300 chr2B 95.535 1814 66 4 673 2477 472902419 472900612 0.000000e+00 2887.0
10 TraesCS2A01G312300 chr2B 85.294 1088 102 48 2561 3624 472900572 472899519 0.000000e+00 1070.0
11 TraesCS2A01G312300 chr7A 95.941 271 11 0 1 271 176551325 176551595 1.190000e-119 440.0
12 TraesCS2A01G312300 chr7A 95.926 270 11 0 1 270 507248520 507248789 4.300000e-119 438.0
13 TraesCS2A01G312300 chr7A 95.926 270 10 1 1 270 507261709 507261977 1.550000e-118 436.0
14 TraesCS2A01G312300 chr7A 95.556 270 12 0 1 270 275734184 275734453 2.000000e-117 433.0
15 TraesCS2A01G312300 chr7A 80.795 151 26 2 471 619 184119248 184119397 8.220000e-22 115.0
16 TraesCS2A01G312300 chr7A 88.710 62 4 3 531 590 562329570 562329630 5.020000e-09 73.1
17 TraesCS2A01G312300 chr7A 100.000 28 0 0 459 486 646957566 646957593 7.000000e-03 52.8
18 TraesCS2A01G312300 chr5A 95.926 270 11 0 1 270 111497425 111497694 4.300000e-119 438.0
19 TraesCS2A01G312300 chr5A 95.556 270 11 1 1 270 111490031 111490299 7.190000e-117 431.0
20 TraesCS2A01G312300 chr5A 84.492 374 54 4 3255 3624 685537286 685537659 2.060000e-97 366.0
21 TraesCS2A01G312300 chr5A 77.119 118 16 9 463 575 427367717 427367828 1.410000e-04 58.4
22 TraesCS2A01G312300 chr1A 95.926 270 11 0 1 270 341671147 341671416 4.300000e-119 438.0
23 TraesCS2A01G312300 chr3A 95.221 272 12 1 1 271 695756608 695756337 2.590000e-116 429.0
24 TraesCS2A01G312300 chr1B 93.561 264 17 0 1230 1493 642618914 642618651 9.430000e-106 394.0
25 TraesCS2A01G312300 chr1B 90.260 154 10 4 994 1145 642619060 642618910 2.850000e-46 196.0
26 TraesCS2A01G312300 chr4B 85.445 371 51 3 3257 3624 646658290 646658660 2.040000e-102 383.0
27 TraesCS2A01G312300 chr4D 83.495 412 55 10 3219 3624 502411392 502411796 4.420000e-99 372.0
28 TraesCS2A01G312300 chr6B 73.446 885 223 11 1551 2429 518035183 518034305 4.510000e-84 322.0
29 TraesCS2A01G312300 chr6B 73.393 778 189 15 1663 2431 518032666 518031898 1.280000e-69 274.0
30 TraesCS2A01G312300 chr6B 83.019 159 24 3 439 597 114081067 114081222 1.360000e-29 141.0
31 TraesCS2A01G312300 chr6B 86.585 82 11 0 539 620 671225985 671226066 1.390000e-14 91.6
32 TraesCS2A01G312300 chr6A 72.994 885 227 11 1551 2429 483741778 483740900 2.120000e-77 300.0
33 TraesCS2A01G312300 chr6A 72.201 777 196 17 1663 2429 483739180 483738414 1.690000e-53 220.0
34 TraesCS2A01G312300 chr6D 72.133 872 221 19 1574 2433 343305879 343305018 1.010000e-60 244.0
35 TraesCS2A01G312300 chr4A 90.260 154 10 4 994 1145 347399526 347399676 2.850000e-46 196.0
36 TraesCS2A01G312300 chr4A 92.982 114 7 1 1386 1498 347399738 347399851 8.050000e-37 165.0
37 TraesCS2A01G312300 chr4A 96.000 75 3 0 1230 1304 347399672 347399746 4.910000e-24 122.0
38 TraesCS2A01G312300 chr3D 84.091 176 23 3 438 611 140625417 140625245 8.050000e-37 165.0
39 TraesCS2A01G312300 chr3D 83.178 107 15 3 510 615 16038950 16039054 1.070000e-15 95.3
40 TraesCS2A01G312300 chr5D 77.215 158 25 6 427 582 310277916 310277768 8.340000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G312300 chr2A 536624675 536628298 3623 True 6693.0 6693 100.0000 1 3624 1 chr2A.!!$R1 3623
1 TraesCS2A01G312300 chr2D 398781060 398784131 3071 True 2039.5 2922 89.9820 502 3624 2 chr2D.!!$R1 3122
2 TraesCS2A01G312300 chr2B 472899519 472902419 2900 True 1978.5 2887 90.4145 673 3624 2 chr2B.!!$R1 2951
3 TraesCS2A01G312300 chr6B 518031898 518035183 3285 True 298.0 322 73.4195 1551 2431 2 chr6B.!!$R1 880
4 TraesCS2A01G312300 chr6A 483738414 483741778 3364 True 260.0 300 72.5975 1551 2429 2 chr6A.!!$R1 878
5 TraesCS2A01G312300 chr6D 343305018 343305879 861 True 244.0 244 72.1330 1574 2433 1 chr6D.!!$R1 859


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 363 0.035630 GCTCTCTGCAAGTGGGATGT 60.036 55.0 0.0 0.0 42.31 3.06 F
366 367 0.108186 TCTGCAAGTGGGATGTAGCG 60.108 55.0 0.0 0.0 33.76 4.26 F
1103 1126 0.167470 CAGCAGCAACAACATCTCGG 59.833 55.0 0.0 0.0 0.00 4.63 F
1104 1127 0.250467 AGCAGCAACAACATCTCGGT 60.250 50.0 0.0 0.0 0.00 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 2099 1.227734 CACGAACCGGTTGAAGGGT 60.228 57.895 27.87 11.41 38.44 4.34 R
2366 4890 4.148825 CCCCCAGGTCGAGCTTCG 62.149 72.222 15.83 7.94 42.10 3.79 R
2537 5067 0.043053 CATTTCGGTATGCTCACGCG 60.043 55.000 3.53 3.53 39.65 6.01 R
2972 5565 0.166814 GCTTCATGTCAGTTGTCGCC 59.833 55.000 0.00 0.00 0.00 5.54 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.822805 GGTCATCCCTTTATATACATAGGTTGA 58.177 37.037 0.00 0.00 0.00 3.18
28 29 9.654663 GTCATCCCTTTATATACATAGGTTGAC 57.345 37.037 14.41 14.41 34.62 3.18
29 30 8.528643 TCATCCCTTTATATACATAGGTTGACG 58.471 37.037 0.00 0.00 0.00 4.35
30 31 6.694447 TCCCTTTATATACATAGGTTGACGC 58.306 40.000 0.00 0.00 0.00 5.19
31 32 5.873164 CCCTTTATATACATAGGTTGACGCC 59.127 44.000 0.00 0.00 0.00 5.68
32 33 5.873164 CCTTTATATACATAGGTTGACGCCC 59.127 44.000 0.00 0.00 0.00 6.13
33 34 3.587797 ATATACATAGGTTGACGCCCG 57.412 47.619 0.00 0.00 0.00 6.13
34 35 0.249741 ATACATAGGTTGACGCCCGC 60.250 55.000 0.00 0.00 0.00 6.13
35 36 2.300850 TACATAGGTTGACGCCCGCC 62.301 60.000 0.00 0.00 0.00 6.13
36 37 4.524318 ATAGGTTGACGCCCGCCG 62.524 66.667 0.00 0.00 44.21 6.46
47 48 4.003788 CCCGCCGGTTCACAGAGT 62.004 66.667 1.90 0.00 0.00 3.24
48 49 2.432628 CCGCCGGTTCACAGAGTC 60.433 66.667 1.90 0.00 0.00 3.36
49 50 2.432628 CGCCGGTTCACAGAGTCC 60.433 66.667 1.90 0.00 0.00 3.85
50 51 2.047179 GCCGGTTCACAGAGTCCC 60.047 66.667 1.90 0.00 0.00 4.46
51 52 2.261671 CCGGTTCACAGAGTCCCG 59.738 66.667 0.00 0.00 38.39 5.14
52 53 2.273179 CCGGTTCACAGAGTCCCGA 61.273 63.158 5.00 0.00 41.08 5.14
53 54 1.213013 CGGTTCACAGAGTCCCGAG 59.787 63.158 0.00 0.00 41.08 4.63
54 55 1.592223 GGTTCACAGAGTCCCGAGG 59.408 63.158 0.00 0.00 0.00 4.63
55 56 1.079750 GTTCACAGAGTCCCGAGGC 60.080 63.158 0.00 0.00 0.00 4.70
56 57 2.283529 TTCACAGAGTCCCGAGGCC 61.284 63.158 0.00 0.00 0.00 5.19
57 58 4.135153 CACAGAGTCCCGAGGCCG 62.135 72.222 0.00 0.00 0.00 6.13
68 69 1.886585 CGAGGCCGGATCATAGAGG 59.113 63.158 5.05 0.00 0.00 3.69
69 70 0.896019 CGAGGCCGGATCATAGAGGT 60.896 60.000 5.05 0.00 0.00 3.85
70 71 0.605589 GAGGCCGGATCATAGAGGTG 59.394 60.000 5.05 0.00 0.00 4.00
71 72 0.105453 AGGCCGGATCATAGAGGTGT 60.105 55.000 5.05 0.00 0.00 4.16
72 73 0.318762 GGCCGGATCATAGAGGTGTC 59.681 60.000 5.05 0.00 0.00 3.67
73 74 0.318762 GCCGGATCATAGAGGTGTCC 59.681 60.000 5.05 0.00 0.00 4.02
75 76 0.598562 CGGATCATAGAGGTGTCCGG 59.401 60.000 0.00 0.00 45.92 5.14
76 77 0.318762 GGATCATAGAGGTGTCCGGC 59.681 60.000 0.00 0.00 0.00 6.13
77 78 1.333177 GATCATAGAGGTGTCCGGCT 58.667 55.000 0.00 0.00 0.00 5.52
78 79 1.271102 GATCATAGAGGTGTCCGGCTC 59.729 57.143 0.00 0.00 0.00 4.70
79 80 1.101635 TCATAGAGGTGTCCGGCTCG 61.102 60.000 0.00 0.00 0.00 5.03
90 91 1.660917 CCGGCTCGGTCTCTATTCC 59.339 63.158 5.56 0.00 42.73 3.01
91 92 0.824182 CCGGCTCGGTCTCTATTCCT 60.824 60.000 5.56 0.00 42.73 3.36
92 93 0.594110 CGGCTCGGTCTCTATTCCTC 59.406 60.000 0.00 0.00 0.00 3.71
93 94 1.816183 CGGCTCGGTCTCTATTCCTCT 60.816 57.143 0.00 0.00 0.00 3.69
94 95 2.550423 CGGCTCGGTCTCTATTCCTCTA 60.550 54.545 0.00 0.00 0.00 2.43
95 96 3.488363 GGCTCGGTCTCTATTCCTCTAA 58.512 50.000 0.00 0.00 0.00 2.10
96 97 3.253921 GGCTCGGTCTCTATTCCTCTAAC 59.746 52.174 0.00 0.00 0.00 2.34
97 98 4.139038 GCTCGGTCTCTATTCCTCTAACT 58.861 47.826 0.00 0.00 0.00 2.24
98 99 4.581409 GCTCGGTCTCTATTCCTCTAACTT 59.419 45.833 0.00 0.00 0.00 2.66
99 100 5.764192 GCTCGGTCTCTATTCCTCTAACTTA 59.236 44.000 0.00 0.00 0.00 2.24
100 101 6.293571 GCTCGGTCTCTATTCCTCTAACTTAC 60.294 46.154 0.00 0.00 0.00 2.34
101 102 6.656902 TCGGTCTCTATTCCTCTAACTTACA 58.343 40.000 0.00 0.00 0.00 2.41
102 103 7.114754 TCGGTCTCTATTCCTCTAACTTACAA 58.885 38.462 0.00 0.00 0.00 2.41
103 104 7.778853 TCGGTCTCTATTCCTCTAACTTACAAT 59.221 37.037 0.00 0.00 0.00 2.71
104 105 9.064706 CGGTCTCTATTCCTCTAACTTACAATA 57.935 37.037 0.00 0.00 0.00 1.90
112 113 7.900782 TCCTCTAACTTACAATACAAGTTGC 57.099 36.000 1.81 0.00 44.02 4.17
113 114 7.446769 TCCTCTAACTTACAATACAAGTTGCA 58.553 34.615 1.81 0.00 44.02 4.08
114 115 8.100791 TCCTCTAACTTACAATACAAGTTGCAT 58.899 33.333 1.81 0.00 44.02 3.96
115 116 8.177663 CCTCTAACTTACAATACAAGTTGCATG 58.822 37.037 1.81 2.28 44.02 4.06
116 117 8.840833 TCTAACTTACAATACAAGTTGCATGA 57.159 30.769 1.81 2.38 44.02 3.07
117 118 9.448438 TCTAACTTACAATACAAGTTGCATGAT 57.552 29.630 1.81 0.00 44.02 2.45
124 125 7.243487 ACAATACAAGTTGCATGATAAAGTCG 58.757 34.615 1.81 0.00 32.32 4.18
125 126 4.685169 ACAAGTTGCATGATAAAGTCGG 57.315 40.909 1.81 0.00 0.00 4.79
126 127 4.072131 ACAAGTTGCATGATAAAGTCGGT 58.928 39.130 1.81 0.00 0.00 4.69
127 128 4.518970 ACAAGTTGCATGATAAAGTCGGTT 59.481 37.500 1.81 0.00 0.00 4.44
128 129 4.946784 AGTTGCATGATAAAGTCGGTTC 57.053 40.909 0.00 0.00 0.00 3.62
129 130 4.323417 AGTTGCATGATAAAGTCGGTTCA 58.677 39.130 0.00 0.00 0.00 3.18
130 131 4.154195 AGTTGCATGATAAAGTCGGTTCAC 59.846 41.667 0.00 0.00 0.00 3.18
131 132 3.669536 TGCATGATAAAGTCGGTTCACA 58.330 40.909 0.00 0.00 0.00 3.58
132 133 4.260985 TGCATGATAAAGTCGGTTCACAT 58.739 39.130 0.00 0.00 0.00 3.21
133 134 4.332543 TGCATGATAAAGTCGGTTCACATC 59.667 41.667 0.00 0.00 0.00 3.06
134 135 4.572389 GCATGATAAAGTCGGTTCACATCT 59.428 41.667 0.00 0.00 0.00 2.90
135 136 5.753438 GCATGATAAAGTCGGTTCACATCTA 59.247 40.000 0.00 0.00 0.00 1.98
136 137 6.292381 GCATGATAAAGTCGGTTCACATCTAC 60.292 42.308 0.00 0.00 0.00 2.59
137 138 6.275494 TGATAAAGTCGGTTCACATCTACA 57.725 37.500 0.00 0.00 0.00 2.74
138 139 6.330278 TGATAAAGTCGGTTCACATCTACAG 58.670 40.000 0.00 0.00 0.00 2.74
139 140 3.594603 AAGTCGGTTCACATCTACAGG 57.405 47.619 0.00 0.00 0.00 4.00
140 141 1.204941 AGTCGGTTCACATCTACAGGC 59.795 52.381 0.00 0.00 0.00 4.85
141 142 1.204941 GTCGGTTCACATCTACAGGCT 59.795 52.381 0.00 0.00 0.00 4.58
142 143 1.899814 TCGGTTCACATCTACAGGCTT 59.100 47.619 0.00 0.00 0.00 4.35
143 144 2.301870 TCGGTTCACATCTACAGGCTTT 59.698 45.455 0.00 0.00 0.00 3.51
144 145 3.512329 TCGGTTCACATCTACAGGCTTTA 59.488 43.478 0.00 0.00 0.00 1.85
145 146 4.020928 TCGGTTCACATCTACAGGCTTTAA 60.021 41.667 0.00 0.00 0.00 1.52
146 147 4.876107 CGGTTCACATCTACAGGCTTTAAT 59.124 41.667 0.00 0.00 0.00 1.40
147 148 5.006746 CGGTTCACATCTACAGGCTTTAATC 59.993 44.000 0.00 0.00 0.00 1.75
148 149 5.297029 GGTTCACATCTACAGGCTTTAATCC 59.703 44.000 0.00 0.00 0.00 3.01
149 150 4.693283 TCACATCTACAGGCTTTAATCCG 58.307 43.478 0.00 0.00 0.00 4.18
150 151 3.248602 CACATCTACAGGCTTTAATCCGC 59.751 47.826 0.00 0.00 0.00 5.54
151 152 2.614829 TCTACAGGCTTTAATCCGCC 57.385 50.000 3.47 3.47 46.65 6.13
157 158 0.459899 GGCTTTAATCCGCCTTTGGG 59.540 55.000 0.00 0.00 42.98 4.12
174 175 4.408378 GCCTTGGGCCTTCGTAAA 57.592 55.556 4.53 0.00 44.06 2.01
175 176 2.180674 GCCTTGGGCCTTCGTAAAG 58.819 57.895 4.53 0.00 44.06 1.85
176 177 1.934220 GCCTTGGGCCTTCGTAAAGC 61.934 60.000 4.53 0.00 44.06 3.51
177 178 1.644786 CCTTGGGCCTTCGTAAAGCG 61.645 60.000 4.53 0.00 43.01 4.68
178 179 2.253414 CTTGGGCCTTCGTAAAGCGC 62.253 60.000 4.53 0.00 41.07 5.92
179 180 3.506096 GGGCCTTCGTAAAGCGCC 61.506 66.667 2.29 8.35 43.02 6.53
180 181 2.744709 GGCCTTCGTAAAGCGCCA 60.745 61.111 2.29 0.00 43.14 5.69
181 182 2.479198 GCCTTCGTAAAGCGCCAC 59.521 61.111 2.29 0.00 41.07 5.01
182 183 3.035576 GCCTTCGTAAAGCGCCACC 62.036 63.158 2.29 0.00 41.07 4.61
183 184 1.669760 CCTTCGTAAAGCGCCACCA 60.670 57.895 2.29 0.00 41.07 4.17
184 185 1.024579 CCTTCGTAAAGCGCCACCAT 61.025 55.000 2.29 0.00 41.07 3.55
185 186 0.373716 CTTCGTAAAGCGCCACCATC 59.626 55.000 2.29 0.00 41.07 3.51
186 187 0.036765 TTCGTAAAGCGCCACCATCT 60.037 50.000 2.29 0.00 41.07 2.90
187 188 0.036765 TCGTAAAGCGCCACCATCTT 60.037 50.000 2.29 0.00 41.07 2.40
188 189 0.373716 CGTAAAGCGCCACCATCTTC 59.626 55.000 2.29 0.00 0.00 2.87
189 190 1.448985 GTAAAGCGCCACCATCTTCA 58.551 50.000 2.29 0.00 0.00 3.02
190 191 1.130561 GTAAAGCGCCACCATCTTCAC 59.869 52.381 2.29 0.00 0.00 3.18
191 192 0.537143 AAAGCGCCACCATCTTCACA 60.537 50.000 2.29 0.00 0.00 3.58
192 193 0.322816 AAGCGCCACCATCTTCACAT 60.323 50.000 2.29 0.00 0.00 3.21
193 194 0.745845 AGCGCCACCATCTTCACATC 60.746 55.000 2.29 0.00 0.00 3.06
194 195 0.745845 GCGCCACCATCTTCACATCT 60.746 55.000 0.00 0.00 0.00 2.90
195 196 1.742761 CGCCACCATCTTCACATCTT 58.257 50.000 0.00 0.00 0.00 2.40
196 197 1.667724 CGCCACCATCTTCACATCTTC 59.332 52.381 0.00 0.00 0.00 2.87
197 198 2.715046 GCCACCATCTTCACATCTTCA 58.285 47.619 0.00 0.00 0.00 3.02
198 199 3.285484 GCCACCATCTTCACATCTTCAT 58.715 45.455 0.00 0.00 0.00 2.57
199 200 3.066342 GCCACCATCTTCACATCTTCATG 59.934 47.826 0.00 0.00 35.92 3.07
200 201 3.630769 CCACCATCTTCACATCTTCATGG 59.369 47.826 0.00 0.00 37.42 3.66
201 202 3.630769 CACCATCTTCACATCTTCATGGG 59.369 47.826 0.00 0.00 35.96 4.00
202 203 2.621998 CCATCTTCACATCTTCATGGGC 59.378 50.000 0.00 0.00 32.78 5.36
203 204 3.552875 CATCTTCACATCTTCATGGGCT 58.447 45.455 0.00 0.00 32.78 5.19
204 205 3.726557 TCTTCACATCTTCATGGGCTT 57.273 42.857 0.00 0.00 32.78 4.35
205 206 3.614092 TCTTCACATCTTCATGGGCTTC 58.386 45.455 0.00 0.00 32.78 3.86
206 207 3.265221 TCTTCACATCTTCATGGGCTTCT 59.735 43.478 0.00 0.00 32.78 2.85
207 208 4.471025 TCTTCACATCTTCATGGGCTTCTA 59.529 41.667 0.00 0.00 32.78 2.10
208 209 5.131642 TCTTCACATCTTCATGGGCTTCTAT 59.868 40.000 0.00 0.00 32.78 1.98
209 210 4.965814 TCACATCTTCATGGGCTTCTATC 58.034 43.478 0.00 0.00 32.78 2.08
210 211 4.657504 TCACATCTTCATGGGCTTCTATCT 59.342 41.667 0.00 0.00 32.78 1.98
211 212 5.131642 TCACATCTTCATGGGCTTCTATCTT 59.868 40.000 0.00 0.00 32.78 2.40
212 213 5.469421 CACATCTTCATGGGCTTCTATCTTC 59.531 44.000 0.00 0.00 33.82 2.87
213 214 5.131642 ACATCTTCATGGGCTTCTATCTTCA 59.868 40.000 0.00 0.00 33.82 3.02
214 215 5.901413 TCTTCATGGGCTTCTATCTTCAT 57.099 39.130 0.00 0.00 0.00 2.57
215 216 5.618236 TCTTCATGGGCTTCTATCTTCATG 58.382 41.667 0.00 0.00 34.89 3.07
216 217 4.362470 TCATGGGCTTCTATCTTCATGG 57.638 45.455 0.00 0.00 34.50 3.66
217 218 3.975982 TCATGGGCTTCTATCTTCATGGA 59.024 43.478 0.00 0.00 34.50 3.41
218 219 4.041321 TCATGGGCTTCTATCTTCATGGAG 59.959 45.833 0.00 0.00 34.50 3.86
219 220 2.707791 TGGGCTTCTATCTTCATGGAGG 59.292 50.000 0.00 0.00 0.00 4.30
220 221 2.708325 GGGCTTCTATCTTCATGGAGGT 59.292 50.000 0.00 0.00 0.00 3.85
221 222 3.904339 GGGCTTCTATCTTCATGGAGGTA 59.096 47.826 0.00 0.00 0.00 3.08
222 223 4.348168 GGGCTTCTATCTTCATGGAGGTAA 59.652 45.833 0.00 0.00 0.00 2.85
223 224 5.301555 GGCTTCTATCTTCATGGAGGTAAC 58.698 45.833 0.00 0.00 0.00 2.50
224 225 5.301555 GCTTCTATCTTCATGGAGGTAACC 58.698 45.833 0.00 0.00 37.17 2.85
225 226 5.743422 GCTTCTATCTTCATGGAGGTAACCC 60.743 48.000 0.00 0.00 37.17 4.11
226 227 3.895656 TCTATCTTCATGGAGGTAACCCG 59.104 47.826 0.00 0.00 35.12 5.28
227 228 1.200519 TCTTCATGGAGGTAACCCGG 58.799 55.000 0.00 0.00 35.12 5.73
228 229 0.463833 CTTCATGGAGGTAACCCGGC 60.464 60.000 0.00 0.00 35.12 6.13
229 230 1.917336 TTCATGGAGGTAACCCGGCC 61.917 60.000 0.00 0.00 35.12 6.13
230 231 2.285818 ATGGAGGTAACCCGGCCA 60.286 61.111 2.24 0.00 42.03 5.36
231 232 2.676265 ATGGAGGTAACCCGGCCAC 61.676 63.158 2.24 0.00 41.08 5.01
232 233 3.007323 GGAGGTAACCCGGCCACT 61.007 66.667 2.24 0.00 35.12 4.00
233 234 2.582978 GAGGTAACCCGGCCACTC 59.417 66.667 2.24 0.00 35.12 3.51
234 235 3.007323 AGGTAACCCGGCCACTCC 61.007 66.667 2.24 0.00 35.12 3.85
235 236 3.007323 GGTAACCCGGCCACTCCT 61.007 66.667 2.24 0.00 0.00 3.69
236 237 1.686800 GGTAACCCGGCCACTCCTA 60.687 63.158 2.24 0.00 0.00 2.94
237 238 1.683418 GGTAACCCGGCCACTCCTAG 61.683 65.000 2.24 0.00 0.00 3.02
238 239 2.062177 TAACCCGGCCACTCCTAGC 61.062 63.158 2.24 0.00 0.00 3.42
243 244 3.400054 GGCCACTCCTAGCCGGTT 61.400 66.667 1.90 0.00 39.87 4.44
244 245 2.669240 GCCACTCCTAGCCGGTTT 59.331 61.111 1.90 0.00 0.00 3.27
245 246 1.619807 GGCCACTCCTAGCCGGTTTA 61.620 60.000 1.90 0.00 39.87 2.01
246 247 0.461516 GCCACTCCTAGCCGGTTTAC 60.462 60.000 1.90 0.00 0.00 2.01
247 248 0.177373 CCACTCCTAGCCGGTTTACC 59.823 60.000 1.90 0.00 0.00 2.85
248 249 1.192428 CACTCCTAGCCGGTTTACCT 58.808 55.000 1.90 0.00 0.00 3.08
249 250 1.136500 CACTCCTAGCCGGTTTACCTC 59.864 57.143 1.90 0.00 0.00 3.85
250 251 0.751452 CTCCTAGCCGGTTTACCTCC 59.249 60.000 1.90 0.00 0.00 4.30
251 252 1.039233 TCCTAGCCGGTTTACCTCCG 61.039 60.000 1.90 0.00 46.49 4.63
257 258 3.441244 CGGTTTACCTCCGGTAACC 57.559 57.895 0.00 8.07 46.28 2.85
258 259 0.607620 CGGTTTACCTCCGGTAACCA 59.392 55.000 18.10 1.26 46.28 3.67
259 260 1.207811 CGGTTTACCTCCGGTAACCAT 59.792 52.381 18.10 0.00 46.28 3.55
260 261 2.430332 CGGTTTACCTCCGGTAACCATA 59.570 50.000 18.10 0.46 46.28 2.74
261 262 3.070015 CGGTTTACCTCCGGTAACCATAT 59.930 47.826 18.10 0.00 46.28 1.78
262 263 4.635223 GGTTTACCTCCGGTAACCATATC 58.365 47.826 0.00 0.00 46.28 1.63
263 264 4.503817 GGTTTACCTCCGGTAACCATATCC 60.504 50.000 0.00 0.00 46.28 2.59
264 265 1.725803 ACCTCCGGTAACCATATCCC 58.274 55.000 0.00 0.00 32.11 3.85
265 266 0.981943 CCTCCGGTAACCATATCCCC 59.018 60.000 0.00 0.00 0.00 4.81
266 267 1.724545 CTCCGGTAACCATATCCCCA 58.275 55.000 0.00 0.00 0.00 4.96
267 268 2.051692 CTCCGGTAACCATATCCCCAA 58.948 52.381 0.00 0.00 0.00 4.12
268 269 1.770061 TCCGGTAACCATATCCCCAAC 59.230 52.381 0.00 0.00 0.00 3.77
269 270 1.491332 CCGGTAACCATATCCCCAACA 59.509 52.381 0.00 0.00 0.00 3.33
270 271 2.486548 CCGGTAACCATATCCCCAACAG 60.487 54.545 0.00 0.00 0.00 3.16
271 272 2.583143 GGTAACCATATCCCCAACAGC 58.417 52.381 0.00 0.00 0.00 4.40
272 273 2.092103 GGTAACCATATCCCCAACAGCA 60.092 50.000 0.00 0.00 0.00 4.41
273 274 2.442236 AACCATATCCCCAACAGCAG 57.558 50.000 0.00 0.00 0.00 4.24
274 275 0.552848 ACCATATCCCCAACAGCAGG 59.447 55.000 0.00 0.00 0.00 4.85
275 276 0.178981 CCATATCCCCAACAGCAGGG 60.179 60.000 0.00 0.00 46.36 4.45
280 281 4.684134 CCCAACAGCAGGGGTGGG 62.684 72.222 11.21 11.21 42.90 4.61
281 282 4.684134 CCAACAGCAGGGGTGGGG 62.684 72.222 0.00 0.00 35.13 4.96
285 286 4.305956 CAGCAGGGGTGGGGCTTT 62.306 66.667 0.00 0.00 0.00 3.51
286 287 3.984732 AGCAGGGGTGGGGCTTTC 61.985 66.667 0.00 0.00 0.00 2.62
288 289 3.589542 CAGGGGTGGGGCTTTCCA 61.590 66.667 0.00 0.00 37.22 3.53
289 290 3.268032 AGGGGTGGGGCTTTCCAG 61.268 66.667 0.00 0.00 37.50 3.86
298 299 4.625800 GCTTTCCAGCCTGTCGAT 57.374 55.556 0.00 0.00 40.61 3.59
299 300 2.388347 GCTTTCCAGCCTGTCGATC 58.612 57.895 0.00 0.00 40.61 3.69
300 301 0.391661 GCTTTCCAGCCTGTCGATCA 60.392 55.000 0.00 0.00 40.61 2.92
301 302 1.745141 GCTTTCCAGCCTGTCGATCAT 60.745 52.381 0.00 0.00 40.61 2.45
302 303 2.636830 CTTTCCAGCCTGTCGATCATT 58.363 47.619 0.00 0.00 0.00 2.57
303 304 2.028420 TTCCAGCCTGTCGATCATTG 57.972 50.000 0.00 0.00 0.00 2.82
304 305 0.178767 TCCAGCCTGTCGATCATTGG 59.821 55.000 0.00 0.00 0.00 3.16
305 306 0.816825 CCAGCCTGTCGATCATTGGG 60.817 60.000 0.00 0.00 0.00 4.12
306 307 0.107508 CAGCCTGTCGATCATTGGGT 60.108 55.000 0.00 0.00 0.00 4.51
307 308 0.179000 AGCCTGTCGATCATTGGGTC 59.821 55.000 0.00 0.00 0.00 4.46
308 309 0.815615 GCCTGTCGATCATTGGGTCC 60.816 60.000 0.00 0.00 0.00 4.46
309 310 0.530650 CCTGTCGATCATTGGGTCCG 60.531 60.000 0.00 0.00 0.00 4.79
310 311 0.530650 CTGTCGATCATTGGGTCCGG 60.531 60.000 0.00 0.00 0.00 5.14
311 312 0.973496 TGTCGATCATTGGGTCCGGA 60.973 55.000 0.00 0.00 0.00 5.14
312 313 0.177141 GTCGATCATTGGGTCCGGAA 59.823 55.000 5.23 0.00 0.00 4.30
313 314 0.177141 TCGATCATTGGGTCCGGAAC 59.823 55.000 12.37 12.37 0.00 3.62
334 335 4.211986 CCGTAATGTCGGGGTTGG 57.788 61.111 0.00 0.00 45.88 3.77
335 336 1.450669 CCGTAATGTCGGGGTTGGG 60.451 63.158 0.00 0.00 45.88 4.12
336 337 2.110352 CGTAATGTCGGGGTTGGGC 61.110 63.158 0.00 0.00 0.00 5.36
337 338 1.001887 GTAATGTCGGGGTTGGGCA 60.002 57.895 0.00 0.00 0.00 5.36
338 339 1.029947 GTAATGTCGGGGTTGGGCAG 61.030 60.000 0.00 0.00 0.00 4.85
339 340 1.202099 TAATGTCGGGGTTGGGCAGA 61.202 55.000 0.00 0.00 0.00 4.26
340 341 2.075355 AATGTCGGGGTTGGGCAGAA 62.075 55.000 0.00 0.00 0.00 3.02
341 342 2.075355 ATGTCGGGGTTGGGCAGAAA 62.075 55.000 0.00 0.00 0.00 2.52
342 343 1.529713 GTCGGGGTTGGGCAGAAAA 60.530 57.895 0.00 0.00 0.00 2.29
343 344 1.228429 TCGGGGTTGGGCAGAAAAG 60.228 57.895 0.00 0.00 0.00 2.27
344 345 2.931068 CGGGGTTGGGCAGAAAAGC 61.931 63.158 0.00 0.00 0.00 3.51
345 346 1.533994 GGGGTTGGGCAGAAAAGCT 60.534 57.895 0.00 0.00 34.17 3.74
346 347 1.536073 GGGGTTGGGCAGAAAAGCTC 61.536 60.000 0.00 0.00 34.90 4.09
347 348 0.540597 GGGTTGGGCAGAAAAGCTCT 60.541 55.000 0.00 0.00 35.52 4.09
348 349 0.884514 GGTTGGGCAGAAAAGCTCTC 59.115 55.000 0.00 0.00 35.52 3.20
349 350 1.546548 GGTTGGGCAGAAAAGCTCTCT 60.547 52.381 0.00 0.00 35.52 3.10
350 351 1.538950 GTTGGGCAGAAAAGCTCTCTG 59.461 52.381 17.53 17.53 42.73 3.35
356 357 3.539431 CAGAAAAGCTCTCTGCAAGTG 57.461 47.619 11.65 0.00 45.94 3.16
357 358 2.225963 CAGAAAAGCTCTCTGCAAGTGG 59.774 50.000 11.65 0.00 45.94 4.00
358 359 1.538950 GAAAAGCTCTCTGCAAGTGGG 59.461 52.381 0.00 0.00 45.94 4.61
359 360 0.767375 AAAGCTCTCTGCAAGTGGGA 59.233 50.000 0.00 0.00 45.94 4.37
360 361 0.990374 AAGCTCTCTGCAAGTGGGAT 59.010 50.000 0.00 0.00 45.94 3.85
361 362 0.252479 AGCTCTCTGCAAGTGGGATG 59.748 55.000 0.00 0.00 45.94 3.51
362 363 0.035630 GCTCTCTGCAAGTGGGATGT 60.036 55.000 0.00 0.00 42.31 3.06
363 364 1.208052 GCTCTCTGCAAGTGGGATGTA 59.792 52.381 0.00 0.00 42.31 2.29
364 365 2.741228 GCTCTCTGCAAGTGGGATGTAG 60.741 54.545 0.00 0.00 42.31 2.74
365 366 1.208052 TCTCTGCAAGTGGGATGTAGC 59.792 52.381 0.00 0.00 33.76 3.58
366 367 0.108186 TCTGCAAGTGGGATGTAGCG 60.108 55.000 0.00 0.00 33.76 4.26
367 368 1.709147 CTGCAAGTGGGATGTAGCGC 61.709 60.000 0.00 0.00 0.00 5.92
368 369 1.745115 GCAAGTGGGATGTAGCGCA 60.745 57.895 11.47 0.00 0.00 6.09
369 370 1.305219 GCAAGTGGGATGTAGCGCAA 61.305 55.000 11.47 0.00 32.25 4.85
370 371 1.164411 CAAGTGGGATGTAGCGCAAA 58.836 50.000 11.47 0.00 32.25 3.68
371 372 1.539388 CAAGTGGGATGTAGCGCAAAA 59.461 47.619 11.47 0.00 32.25 2.44
372 373 1.165270 AGTGGGATGTAGCGCAAAAC 58.835 50.000 11.47 5.27 32.25 2.43
374 375 1.302383 TGGGATGTAGCGCAAAACGG 61.302 55.000 11.47 0.00 43.93 4.44
384 385 4.383602 CAAAACGGTCGCGGCTGG 62.384 66.667 25.36 12.69 0.00 4.85
385 386 4.612412 AAAACGGTCGCGGCTGGA 62.612 61.111 25.36 0.00 0.00 3.86
389 390 4.124351 CGGTCGCGGCTGGACTAA 62.124 66.667 12.83 0.00 34.82 2.24
390 391 2.263540 GGTCGCGGCTGGACTAAA 59.736 61.111 11.94 0.00 34.82 1.85
391 392 1.375013 GGTCGCGGCTGGACTAAAA 60.375 57.895 11.94 0.00 34.82 1.52
392 393 0.743345 GGTCGCGGCTGGACTAAAAT 60.743 55.000 11.94 0.00 34.82 1.82
393 394 1.084289 GTCGCGGCTGGACTAAAATT 58.916 50.000 1.90 0.00 0.00 1.82
394 395 1.083489 TCGCGGCTGGACTAAAATTG 58.917 50.000 6.13 0.00 0.00 2.32
395 396 1.083489 CGCGGCTGGACTAAAATTGA 58.917 50.000 0.00 0.00 0.00 2.57
396 397 1.062587 CGCGGCTGGACTAAAATTGAG 59.937 52.381 0.00 0.00 0.00 3.02
397 398 1.401905 GCGGCTGGACTAAAATTGAGG 59.598 52.381 0.00 0.00 0.00 3.86
398 399 1.401905 CGGCTGGACTAAAATTGAGGC 59.598 52.381 0.00 0.00 0.00 4.70
399 400 2.446435 GGCTGGACTAAAATTGAGGCA 58.554 47.619 0.00 0.00 0.00 4.75
400 401 2.164422 GGCTGGACTAAAATTGAGGCAC 59.836 50.000 0.00 0.00 0.00 5.01
401 402 2.159517 GCTGGACTAAAATTGAGGCACG 60.160 50.000 0.00 0.00 0.00 5.34
402 403 3.334691 CTGGACTAAAATTGAGGCACGA 58.665 45.455 0.00 0.00 0.00 4.35
403 404 3.334691 TGGACTAAAATTGAGGCACGAG 58.665 45.455 0.00 0.00 0.00 4.18
404 405 3.007506 TGGACTAAAATTGAGGCACGAGA 59.992 43.478 0.00 0.00 0.00 4.04
405 406 4.192317 GGACTAAAATTGAGGCACGAGAT 58.808 43.478 0.00 0.00 0.00 2.75
406 407 5.105106 TGGACTAAAATTGAGGCACGAGATA 60.105 40.000 0.00 0.00 0.00 1.98
407 408 5.463724 GGACTAAAATTGAGGCACGAGATAG 59.536 44.000 0.00 0.00 0.00 2.08
408 409 5.360591 ACTAAAATTGAGGCACGAGATAGG 58.639 41.667 0.00 0.00 0.00 2.57
409 410 3.914426 AAATTGAGGCACGAGATAGGT 57.086 42.857 0.00 0.00 0.00 3.08
410 411 3.914426 AATTGAGGCACGAGATAGGTT 57.086 42.857 0.00 0.00 0.00 3.50
411 412 3.914426 ATTGAGGCACGAGATAGGTTT 57.086 42.857 0.00 0.00 0.00 3.27
412 413 3.695830 TTGAGGCACGAGATAGGTTTT 57.304 42.857 0.00 0.00 0.00 2.43
413 414 3.695830 TGAGGCACGAGATAGGTTTTT 57.304 42.857 0.00 0.00 0.00 1.94
414 415 3.334691 TGAGGCACGAGATAGGTTTTTG 58.665 45.455 0.00 0.00 0.00 2.44
415 416 2.678336 GAGGCACGAGATAGGTTTTTGG 59.322 50.000 0.00 0.00 0.00 3.28
416 417 1.743394 GGCACGAGATAGGTTTTTGGG 59.257 52.381 0.00 0.00 0.00 4.12
417 418 1.743394 GCACGAGATAGGTTTTTGGGG 59.257 52.381 0.00 0.00 0.00 4.96
418 419 2.365582 CACGAGATAGGTTTTTGGGGG 58.634 52.381 0.00 0.00 0.00 5.40
419 420 2.026636 CACGAGATAGGTTTTTGGGGGA 60.027 50.000 0.00 0.00 0.00 4.81
420 421 2.645797 ACGAGATAGGTTTTTGGGGGAA 59.354 45.455 0.00 0.00 0.00 3.97
421 422 3.074836 ACGAGATAGGTTTTTGGGGGAAA 59.925 43.478 0.00 0.00 0.00 3.13
422 423 4.083565 CGAGATAGGTTTTTGGGGGAAAA 58.916 43.478 0.00 0.00 0.00 2.29
423 424 4.157840 CGAGATAGGTTTTTGGGGGAAAAG 59.842 45.833 0.00 0.00 34.96 2.27
424 425 5.084519 GAGATAGGTTTTTGGGGGAAAAGT 58.915 41.667 0.00 0.00 34.96 2.66
425 426 5.084519 AGATAGGTTTTTGGGGGAAAAGTC 58.915 41.667 0.00 0.00 34.96 3.01
426 427 3.123392 AGGTTTTTGGGGGAAAAGTCA 57.877 42.857 0.00 0.00 34.96 3.41
427 428 3.664320 AGGTTTTTGGGGGAAAAGTCAT 58.336 40.909 0.00 0.00 34.96 3.06
428 429 4.044308 AGGTTTTTGGGGGAAAAGTCATT 58.956 39.130 0.00 0.00 34.96 2.57
429 430 4.102524 AGGTTTTTGGGGGAAAAGTCATTC 59.897 41.667 0.00 0.00 34.96 2.67
430 431 4.102524 GGTTTTTGGGGGAAAAGTCATTCT 59.897 41.667 0.00 0.00 34.96 2.40
431 432 5.305902 GGTTTTTGGGGGAAAAGTCATTCTA 59.694 40.000 0.00 0.00 34.96 2.10
432 433 6.455647 GTTTTTGGGGGAAAAGTCATTCTAG 58.544 40.000 0.00 0.00 34.96 2.43
433 434 4.316025 TTGGGGGAAAAGTCATTCTAGG 57.684 45.455 0.00 0.00 0.00 3.02
434 435 3.537337 TGGGGGAAAAGTCATTCTAGGA 58.463 45.455 0.00 0.00 0.00 2.94
435 436 3.920197 TGGGGGAAAAGTCATTCTAGGAA 59.080 43.478 0.00 0.00 0.00 3.36
436 437 4.263771 TGGGGGAAAAGTCATTCTAGGAAC 60.264 45.833 0.00 0.00 0.00 3.62
437 438 3.939592 GGGGAAAAGTCATTCTAGGAACG 59.060 47.826 0.00 0.00 0.00 3.95
438 439 3.939592 GGGAAAAGTCATTCTAGGAACGG 59.060 47.826 0.00 0.00 0.00 4.44
439 440 3.939592 GGAAAAGTCATTCTAGGAACGGG 59.060 47.826 0.00 0.00 0.00 5.28
440 441 4.323257 GGAAAAGTCATTCTAGGAACGGGA 60.323 45.833 0.00 0.00 0.00 5.14
441 442 5.429130 GAAAAGTCATTCTAGGAACGGGAT 58.571 41.667 0.00 0.00 0.00 3.85
442 443 5.437191 AAAGTCATTCTAGGAACGGGATT 57.563 39.130 0.00 0.00 0.00 3.01
443 444 4.408182 AGTCATTCTAGGAACGGGATTG 57.592 45.455 0.00 0.00 0.00 2.67
444 445 2.872858 GTCATTCTAGGAACGGGATTGC 59.127 50.000 0.00 0.00 0.00 3.56
445 446 1.867233 CATTCTAGGAACGGGATTGCG 59.133 52.381 0.00 0.00 32.92 4.85
446 447 1.187974 TTCTAGGAACGGGATTGCGA 58.812 50.000 0.00 0.00 32.92 5.10
447 448 1.187974 TCTAGGAACGGGATTGCGAA 58.812 50.000 0.00 0.00 32.92 4.70
448 449 1.136305 TCTAGGAACGGGATTGCGAAG 59.864 52.381 0.00 0.00 32.92 3.79
449 450 0.899720 TAGGAACGGGATTGCGAAGT 59.100 50.000 0.00 0.00 32.92 3.01
450 451 0.391263 AGGAACGGGATTGCGAAGTC 60.391 55.000 0.00 0.00 32.92 3.01
451 452 1.693083 GGAACGGGATTGCGAAGTCG 61.693 60.000 0.00 0.00 43.27 4.18
462 463 2.441023 CGAAGTCGCGGTCAATTGA 58.559 52.632 6.13 3.38 0.00 2.57
463 464 0.366871 CGAAGTCGCGGTCAATTGAG 59.633 55.000 8.80 0.00 0.00 3.02
464 465 1.710013 GAAGTCGCGGTCAATTGAGA 58.290 50.000 8.80 0.00 0.00 3.27
465 466 1.390463 GAAGTCGCGGTCAATTGAGAC 59.610 52.381 8.80 12.42 37.80 3.36
466 467 0.603569 AGTCGCGGTCAATTGAGACT 59.396 50.000 17.78 17.78 39.87 3.24
467 468 1.000955 AGTCGCGGTCAATTGAGACTT 59.999 47.619 17.78 6.86 41.54 3.01
468 469 2.230508 AGTCGCGGTCAATTGAGACTTA 59.769 45.455 17.78 0.23 41.54 2.24
469 470 2.991190 GTCGCGGTCAATTGAGACTTAA 59.009 45.455 8.80 0.00 38.57 1.85
470 471 2.991190 TCGCGGTCAATTGAGACTTAAC 59.009 45.455 8.80 0.00 38.57 2.01
471 472 2.993899 CGCGGTCAATTGAGACTTAACT 59.006 45.455 8.80 0.00 38.57 2.24
472 473 4.082625 TCGCGGTCAATTGAGACTTAACTA 60.083 41.667 8.80 0.00 38.57 2.24
473 474 4.624024 CGCGGTCAATTGAGACTTAACTAA 59.376 41.667 8.80 0.00 38.57 2.24
474 475 5.220228 CGCGGTCAATTGAGACTTAACTAAG 60.220 44.000 8.80 0.00 38.57 2.18
525 526 4.582701 TGTTGAGATTCGGTGCAAAATT 57.417 36.364 0.00 0.00 0.00 1.82
583 584 8.703604 TGTTATATCACTTGACTTAGACTTGC 57.296 34.615 0.00 0.00 0.00 4.01
599 600 5.583969 GACTTGCTTAAGTCTCAGTCAAC 57.416 43.478 11.75 0.00 44.32 3.18
600 601 5.283457 ACTTGCTTAAGTCTCAGTCAACT 57.717 39.130 4.02 0.00 0.00 3.16
601 602 6.406692 ACTTGCTTAAGTCTCAGTCAACTA 57.593 37.500 4.02 0.00 0.00 2.24
607 608 6.516860 GCTTAAGTCTCAGTCAACTAAGACCA 60.517 42.308 9.40 0.00 41.23 4.02
615 616 5.105106 TCAGTCAACTAAGACCAAGACACAA 60.105 40.000 0.00 0.00 39.34 3.33
617 618 4.272748 GTCAACTAAGACCAAGACACAACC 59.727 45.833 0.00 0.00 32.36 3.77
618 619 4.163458 TCAACTAAGACCAAGACACAACCT 59.837 41.667 0.00 0.00 0.00 3.50
620 621 4.704965 ACTAAGACCAAGACACAACCTTC 58.295 43.478 0.00 0.00 0.00 3.46
621 622 2.640316 AGACCAAGACACAACCTTCC 57.360 50.000 0.00 0.00 0.00 3.46
622 623 1.843851 AGACCAAGACACAACCTTCCA 59.156 47.619 0.00 0.00 0.00 3.53
623 624 2.443255 AGACCAAGACACAACCTTCCAT 59.557 45.455 0.00 0.00 0.00 3.41
624 625 2.554032 GACCAAGACACAACCTTCCATG 59.446 50.000 0.00 0.00 0.00 3.66
625 626 2.174639 ACCAAGACACAACCTTCCATGA 59.825 45.455 0.00 0.00 0.00 3.07
626 627 3.221771 CCAAGACACAACCTTCCATGAA 58.778 45.455 0.00 0.00 0.00 2.57
627 628 3.636300 CCAAGACACAACCTTCCATGAAA 59.364 43.478 0.00 0.00 0.00 2.69
628 629 4.099266 CCAAGACACAACCTTCCATGAAAA 59.901 41.667 0.00 0.00 0.00 2.29
629 630 5.221501 CCAAGACACAACCTTCCATGAAAAT 60.222 40.000 0.00 0.00 0.00 1.82
630 631 6.015519 CCAAGACACAACCTTCCATGAAAATA 60.016 38.462 0.00 0.00 0.00 1.40
631 632 7.432869 CAAGACACAACCTTCCATGAAAATAA 58.567 34.615 0.00 0.00 0.00 1.40
632 633 7.595819 AGACACAACCTTCCATGAAAATAAA 57.404 32.000 0.00 0.00 0.00 1.40
633 634 8.193953 AGACACAACCTTCCATGAAAATAAAT 57.806 30.769 0.00 0.00 0.00 1.40
634 635 8.650490 AGACACAACCTTCCATGAAAATAAATT 58.350 29.630 0.00 0.00 0.00 1.82
635 636 8.606040 ACACAACCTTCCATGAAAATAAATTG 57.394 30.769 0.00 0.00 0.00 2.32
636 637 7.661027 ACACAACCTTCCATGAAAATAAATTGG 59.339 33.333 0.00 0.00 0.00 3.16
637 638 7.119553 CACAACCTTCCATGAAAATAAATTGGG 59.880 37.037 0.00 0.00 0.00 4.12
638 639 7.017056 ACAACCTTCCATGAAAATAAATTGGGA 59.983 33.333 0.00 0.00 0.00 4.37
639 640 7.754091 ACCTTCCATGAAAATAAATTGGGAT 57.246 32.000 0.00 0.00 0.00 3.85
640 641 8.852671 ACCTTCCATGAAAATAAATTGGGATA 57.147 30.769 0.00 0.00 0.00 2.59
641 642 9.451206 ACCTTCCATGAAAATAAATTGGGATAT 57.549 29.630 0.00 0.00 0.00 1.63
642 643 9.715121 CCTTCCATGAAAATAAATTGGGATATG 57.285 33.333 0.00 0.00 0.00 1.78
643 644 9.211485 CTTCCATGAAAATAAATTGGGATATGC 57.789 33.333 0.00 0.00 0.00 3.14
644 645 8.495160 TCCATGAAAATAAATTGGGATATGCT 57.505 30.769 0.00 0.00 0.00 3.79
645 646 9.599056 TCCATGAAAATAAATTGGGATATGCTA 57.401 29.630 0.00 0.00 0.00 3.49
657 658 6.355588 TGGGATATGCTAGATATACAGGGA 57.644 41.667 0.00 0.00 0.00 4.20
736 752 3.878699 CCTGCCTTTTGAAGCAAAATTGT 59.121 39.130 5.87 0.00 41.53 2.71
787 804 5.036737 GTCACACATCCAAAGTCAAAAGTG 58.963 41.667 0.00 0.00 0.00 3.16
877 894 4.457466 TGCATGTCAGATACAGATGCATT 58.543 39.130 0.00 0.00 44.96 3.56
921 938 3.259592 GGTACCAATTTCCGGCTGT 57.740 52.632 7.15 0.00 0.00 4.40
937 954 2.358898 GGCTGTGATAATGCGGAAACAT 59.641 45.455 0.00 0.00 0.00 2.71
987 1004 4.822685 TCTCGAGGAACACTACTAGACT 57.177 45.455 13.56 0.00 0.00 3.24
988 1005 4.505808 TCTCGAGGAACACTACTAGACTG 58.494 47.826 13.56 0.00 0.00 3.51
989 1006 3.008330 TCGAGGAACACTACTAGACTGC 58.992 50.000 0.00 0.00 0.00 4.40
990 1007 2.097791 CGAGGAACACTACTAGACTGCC 59.902 54.545 0.00 0.00 0.00 4.85
991 1008 3.090037 GAGGAACACTACTAGACTGCCA 58.910 50.000 0.00 0.00 0.00 4.92
992 1009 3.093057 AGGAACACTACTAGACTGCCAG 58.907 50.000 0.00 0.00 0.00 4.85
1095 1118 2.203195 ACCTCGCAGCAGCAACAA 60.203 55.556 0.82 0.00 42.27 2.83
1097 1120 2.545596 CCTCGCAGCAGCAACAACA 61.546 57.895 0.82 0.00 42.27 3.33
1098 1121 1.577922 CTCGCAGCAGCAACAACAT 59.422 52.632 0.82 0.00 42.27 2.71
1099 1122 0.453950 CTCGCAGCAGCAACAACATC 60.454 55.000 0.82 0.00 42.27 3.06
1100 1123 0.886043 TCGCAGCAGCAACAACATCT 60.886 50.000 0.82 0.00 42.27 2.90
1102 1125 0.453950 GCAGCAGCAACAACATCTCG 60.454 55.000 0.00 0.00 41.58 4.04
1103 1126 0.167470 CAGCAGCAACAACATCTCGG 59.833 55.000 0.00 0.00 0.00 4.63
1104 1127 0.250467 AGCAGCAACAACATCTCGGT 60.250 50.000 0.00 0.00 0.00 4.69
1797 1820 3.246880 ACCGTGAACTGGTCCCCC 61.247 66.667 0.00 0.00 33.35 5.40
2073 2099 4.954118 ACCCTGGACCTGGACGCA 62.954 66.667 18.68 0.00 0.00 5.24
2397 4922 3.387947 GGGGCGGAGAGGAACGAA 61.388 66.667 0.00 0.00 0.00 3.85
2415 4940 0.810648 AATGGTACGTCTCGGCGTTA 59.189 50.000 6.85 0.00 43.04 3.18
2452 4982 0.462581 ATGATCGCGCCTTGTGTCAT 60.463 50.000 0.00 0.00 0.00 3.06
2460 4990 1.876799 CGCCTTGTGTCATGTTGGTAA 59.123 47.619 0.00 0.00 0.00 2.85
2468 4998 7.042791 CCTTGTGTCATGTTGGTAATTTGTTTC 60.043 37.037 0.00 0.00 0.00 2.78
2469 4999 7.106439 TGTGTCATGTTGGTAATTTGTTTCT 57.894 32.000 0.00 0.00 0.00 2.52
2471 5001 7.704472 TGTGTCATGTTGGTAATTTGTTTCTTC 59.296 33.333 0.00 0.00 0.00 2.87
2477 5007 5.195001 TGGTAATTTGTTTCTTCACTGCC 57.805 39.130 0.00 0.00 0.00 4.85
2478 5008 4.646945 TGGTAATTTGTTTCTTCACTGCCA 59.353 37.500 0.00 0.00 0.00 4.92
2479 5009 5.221224 TGGTAATTTGTTTCTTCACTGCCAG 60.221 40.000 0.00 0.00 0.00 4.85
2480 5010 5.221244 GGTAATTTGTTTCTTCACTGCCAGT 60.221 40.000 0.00 0.00 0.00 4.00
2484 5014 2.423185 TGTTTCTTCACTGCCAGTTGTG 59.577 45.455 0.00 0.00 35.68 3.33
2486 5016 2.418368 TCTTCACTGCCAGTTGTGTT 57.582 45.000 0.00 0.00 35.82 3.32
2490 5020 2.441410 TCACTGCCAGTTGTGTTTTGA 58.559 42.857 0.00 0.00 35.82 2.69
2492 5022 1.750778 ACTGCCAGTTGTGTTTTGAGG 59.249 47.619 0.00 0.00 0.00 3.86
2494 5024 1.341482 TGCCAGTTGTGTTTTGAGGGA 60.341 47.619 0.00 0.00 0.00 4.20
2495 5025 1.338020 GCCAGTTGTGTTTTGAGGGAG 59.662 52.381 0.00 0.00 0.00 4.30
2496 5026 1.338020 CCAGTTGTGTTTTGAGGGAGC 59.662 52.381 0.00 0.00 0.00 4.70
2505 5035 5.716228 TGTGTTTTGAGGGAGCATAATTGAT 59.284 36.000 0.00 0.00 0.00 2.57
2507 5037 7.148086 TGTGTTTTGAGGGAGCATAATTGATAC 60.148 37.037 0.00 0.00 0.00 2.24
2508 5038 6.889177 TGTTTTGAGGGAGCATAATTGATACA 59.111 34.615 0.00 0.00 0.00 2.29
2509 5039 7.560991 TGTTTTGAGGGAGCATAATTGATACAT 59.439 33.333 0.00 0.00 0.00 2.29
2510 5040 7.514784 TTTGAGGGAGCATAATTGATACATG 57.485 36.000 0.00 0.00 0.00 3.21
2511 5041 6.438186 TGAGGGAGCATAATTGATACATGA 57.562 37.500 0.00 0.00 0.00 3.07
2512 5042 6.840527 TGAGGGAGCATAATTGATACATGAA 58.159 36.000 0.00 0.00 0.00 2.57
2513 5043 7.289310 TGAGGGAGCATAATTGATACATGAAA 58.711 34.615 0.00 0.00 0.00 2.69
2514 5044 7.229306 TGAGGGAGCATAATTGATACATGAAAC 59.771 37.037 0.00 0.00 0.00 2.78
2515 5045 7.062322 AGGGAGCATAATTGATACATGAAACA 58.938 34.615 0.00 0.00 0.00 2.83
2516 5046 7.230108 AGGGAGCATAATTGATACATGAAACAG 59.770 37.037 0.00 0.00 0.00 3.16
2517 5047 7.365741 GGAGCATAATTGATACATGAAACAGG 58.634 38.462 0.00 0.00 0.00 4.00
2518 5048 7.281040 AGCATAATTGATACATGAAACAGGG 57.719 36.000 0.00 0.00 0.00 4.45
2519 5049 6.835488 AGCATAATTGATACATGAAACAGGGT 59.165 34.615 0.00 0.00 0.00 4.34
2520 5050 7.342799 AGCATAATTGATACATGAAACAGGGTT 59.657 33.333 0.00 0.00 0.00 4.11
2521 5051 8.629158 GCATAATTGATACATGAAACAGGGTTA 58.371 33.333 0.00 0.00 0.00 2.85
2524 5054 8.877864 AATTGATACATGAAACAGGGTTAAGA 57.122 30.769 0.00 0.00 0.00 2.10
2525 5055 9.479549 AATTGATACATGAAACAGGGTTAAGAT 57.520 29.630 0.00 0.00 0.00 2.40
2527 5057 9.967451 TTGATACATGAAACAGGGTTAAGATAA 57.033 29.630 0.00 0.00 0.00 1.75
2539 5069 8.309656 ACAGGGTTAAGATAATTATAGGTACGC 58.690 37.037 0.00 4.12 0.00 4.42
2540 5070 7.487189 CAGGGTTAAGATAATTATAGGTACGCG 59.513 40.741 3.53 3.53 0.00 6.01
2541 5071 7.177392 AGGGTTAAGATAATTATAGGTACGCGT 59.823 37.037 19.17 19.17 0.00 6.01
2542 5072 7.274250 GGGTTAAGATAATTATAGGTACGCGTG 59.726 40.741 24.59 0.00 0.00 5.34
2543 5073 8.023128 GGTTAAGATAATTATAGGTACGCGTGA 58.977 37.037 24.59 4.57 0.00 4.35
2544 5074 9.059485 GTTAAGATAATTATAGGTACGCGTGAG 57.941 37.037 24.59 0.00 0.00 3.51
2563 5093 2.290641 GAGCATACCGAAATGGCGAAAT 59.709 45.455 0.00 0.00 43.94 2.17
2582 5112 6.347240 GCGAAATTGTGGCAAATTTTACATGA 60.347 34.615 16.12 0.00 39.31 3.07
2585 5115 9.896263 GAAATTGTGGCAAATTTTACATGATTT 57.104 25.926 16.12 2.48 39.31 2.17
2590 5120 7.930325 TGTGGCAAATTTTACATGATTTCTGAA 59.070 29.630 0.00 0.00 0.00 3.02
2592 5122 8.991026 TGGCAAATTTTACATGATTTCTGAAAG 58.009 29.630 8.95 0.00 0.00 2.62
2602 5132 8.400184 ACATGATTTCTGAAAGATTCACAGAA 57.600 30.769 8.95 13.11 46.36 3.02
2603 5133 8.512956 ACATGATTTCTGAAAGATTCACAGAAG 58.487 33.333 8.95 9.68 46.36 2.85
2611 5141 9.388506 TCTGAAAGATTCACAGAAGAATAATCC 57.611 33.333 0.00 0.00 38.67 3.01
2614 5144 9.171877 GAAAGATTCACAGAAGAATAATCCAGT 57.828 33.333 0.00 0.00 38.30 4.00
2619 5149 5.412594 TCACAGAAGAATAATCCAGTGCAAC 59.587 40.000 0.00 0.00 0.00 4.17
2648 5178 5.597806 CATGATAAAACCTCCTGCTACGTA 58.402 41.667 0.00 0.00 0.00 3.57
2663 5193 2.893398 GTAGCACGGGTAGCAGCT 59.107 61.111 0.00 0.00 40.92 4.24
2714 5271 5.824904 GTGCATTCATGTACTCCAATCTT 57.175 39.130 0.00 0.00 39.79 2.40
2720 5277 6.358974 TTCATGTACTCCAATCTTCTGTCA 57.641 37.500 0.00 0.00 0.00 3.58
2722 5279 4.808414 TGTACTCCAATCTTCTGTCAGG 57.192 45.455 0.00 0.00 0.00 3.86
2755 5312 5.542779 ACTGAAGTCTCACCAAATCAGTAC 58.457 41.667 4.55 0.00 44.00 2.73
2762 5319 5.934625 GTCTCACCAAATCAGTACAGAACAT 59.065 40.000 0.00 0.00 0.00 2.71
2763 5320 5.934043 TCTCACCAAATCAGTACAGAACATG 59.066 40.000 0.00 0.00 0.00 3.21
2791 5352 7.670605 AACATGTTTAGATACCTACTGGCTA 57.329 36.000 4.92 0.00 36.63 3.93
2795 5356 5.297776 TGTTTAGATACCTACTGGCTACGTC 59.702 44.000 0.00 0.00 36.63 4.34
2799 5360 0.607489 ACCTACTGGCTACGTCGTGT 60.607 55.000 8.47 0.00 36.63 4.49
2801 5362 0.800631 CTACTGGCTACGTCGTGTGA 59.199 55.000 8.47 0.00 0.00 3.58
2802 5363 0.800631 TACTGGCTACGTCGTGTGAG 59.199 55.000 8.47 0.00 0.00 3.51
2805 5366 0.170339 TGGCTACGTCGTGTGAGATG 59.830 55.000 8.47 0.00 0.00 2.90
2812 5380 1.914051 CGTCGTGTGAGATGTAAGCAG 59.086 52.381 0.00 0.00 0.00 4.24
2816 5384 2.674852 CGTGTGAGATGTAAGCAGCATT 59.325 45.455 0.00 0.00 32.61 3.56
2818 5386 4.026228 CGTGTGAGATGTAAGCAGCATTAG 60.026 45.833 0.00 0.00 32.61 1.73
2848 5416 7.498900 TGTTTAGTGATCAGCAAAAGAAGAAGA 59.501 33.333 0.00 0.00 0.00 2.87
2850 5418 6.557291 AGTGATCAGCAAAAGAAGAAGAAG 57.443 37.500 0.00 0.00 0.00 2.85
2856 5424 5.533903 TCAGCAAAAGAAGAAGAAGCTTGAT 59.466 36.000 2.10 0.00 0.00 2.57
2886 5454 4.093998 CAGAAATCTGCATCTACAAACGCT 59.906 41.667 0.00 0.00 37.15 5.07
2889 5457 1.464608 TCTGCATCTACAAACGCTTGC 59.535 47.619 0.00 0.00 35.84 4.01
2890 5458 1.466167 CTGCATCTACAAACGCTTGCT 59.534 47.619 0.00 0.00 35.84 3.91
2891 5459 1.197492 TGCATCTACAAACGCTTGCTG 59.803 47.619 0.00 0.00 35.84 4.41
2892 5460 1.197721 GCATCTACAAACGCTTGCTGT 59.802 47.619 0.00 0.00 35.84 4.40
2893 5461 2.726066 GCATCTACAAACGCTTGCTGTC 60.726 50.000 0.00 0.00 35.84 3.51
2894 5462 2.232756 TCTACAAACGCTTGCTGTCA 57.767 45.000 0.00 0.00 35.84 3.58
2897 5465 1.597742 ACAAACGCTTGCTGTCAGAT 58.402 45.000 3.32 0.00 35.84 2.90
2898 5466 2.766313 ACAAACGCTTGCTGTCAGATA 58.234 42.857 3.32 0.00 35.84 1.98
2899 5467 2.480419 ACAAACGCTTGCTGTCAGATAC 59.520 45.455 3.32 0.00 35.84 2.24
2901 5469 0.458543 ACGCTTGCTGTCAGATACCG 60.459 55.000 3.32 3.15 0.00 4.02
2902 5470 0.179137 CGCTTGCTGTCAGATACCGA 60.179 55.000 3.32 0.00 0.00 4.69
2903 5471 1.565305 GCTTGCTGTCAGATACCGAG 58.435 55.000 3.32 0.00 0.00 4.63
2904 5472 1.565305 CTTGCTGTCAGATACCGAGC 58.435 55.000 3.32 0.00 0.00 5.03
2905 5473 0.175760 TTGCTGTCAGATACCGAGCC 59.824 55.000 3.32 0.00 0.00 4.70
2907 5475 0.175760 GCTGTCAGATACCGAGCCAA 59.824 55.000 3.32 0.00 0.00 4.52
2910 5478 1.204704 TGTCAGATACCGAGCCAACAG 59.795 52.381 0.00 0.00 0.00 3.16
2911 5479 1.476891 GTCAGATACCGAGCCAACAGA 59.523 52.381 0.00 0.00 0.00 3.41
2920 5513 1.393539 CGAGCCAACAGAAACATACGG 59.606 52.381 0.00 0.00 0.00 4.02
2924 5517 0.808755 CAACAGAAACATACGGCCCC 59.191 55.000 0.00 0.00 0.00 5.80
2925 5518 0.402504 AACAGAAACATACGGCCCCA 59.597 50.000 0.00 0.00 0.00 4.96
2933 5526 1.314730 CATACGGCCCCAAACCATAC 58.685 55.000 0.00 0.00 0.00 2.39
2947 5540 5.643777 CCAAACCATACAAGAACAGAGTAGG 59.356 44.000 0.00 0.00 0.00 3.18
2948 5541 6.464222 CAAACCATACAAGAACAGAGTAGGA 58.536 40.000 0.00 0.00 0.00 2.94
2956 5549 3.845860 AGAACAGAGTAGGAACACAGGA 58.154 45.455 0.00 0.00 0.00 3.86
2957 5550 4.223953 AGAACAGAGTAGGAACACAGGAA 58.776 43.478 0.00 0.00 0.00 3.36
2958 5551 4.841246 AGAACAGAGTAGGAACACAGGAAT 59.159 41.667 0.00 0.00 0.00 3.01
2959 5552 4.810191 ACAGAGTAGGAACACAGGAATC 57.190 45.455 0.00 0.00 0.00 2.52
2960 5553 4.160329 ACAGAGTAGGAACACAGGAATCA 58.840 43.478 0.00 0.00 0.00 2.57
2961 5554 4.021016 ACAGAGTAGGAACACAGGAATCAC 60.021 45.833 0.00 0.00 0.00 3.06
2962 5555 4.221703 CAGAGTAGGAACACAGGAATCACT 59.778 45.833 0.00 0.00 0.00 3.41
2963 5556 4.221703 AGAGTAGGAACACAGGAATCACTG 59.778 45.833 0.00 0.00 44.03 3.66
2964 5557 2.191128 AGGAACACAGGAATCACTGC 57.809 50.000 0.00 0.00 42.21 4.40
2965 5558 1.168714 GGAACACAGGAATCACTGCC 58.831 55.000 0.00 0.00 42.21 4.85
2966 5559 0.798776 GAACACAGGAATCACTGCCG 59.201 55.000 0.00 0.00 42.21 5.69
2967 5560 0.396435 AACACAGGAATCACTGCCGA 59.604 50.000 0.00 0.00 42.21 5.54
2968 5561 0.320771 ACACAGGAATCACTGCCGAC 60.321 55.000 0.00 0.00 42.21 4.79
2969 5562 0.320683 CACAGGAATCACTGCCGACA 60.321 55.000 0.00 0.00 42.21 4.35
2970 5563 0.615331 ACAGGAATCACTGCCGACAT 59.385 50.000 0.00 0.00 42.21 3.06
2971 5564 1.831106 ACAGGAATCACTGCCGACATA 59.169 47.619 0.00 0.00 42.21 2.29
2972 5565 2.159043 ACAGGAATCACTGCCGACATAG 60.159 50.000 0.00 0.00 42.21 2.23
2973 5566 1.414181 AGGAATCACTGCCGACATAGG 59.586 52.381 0.00 0.00 0.00 2.57
2982 5575 2.665777 CCGACATAGGCGACAACTG 58.334 57.895 0.00 0.00 0.00 3.16
2983 5576 0.172578 CCGACATAGGCGACAACTGA 59.827 55.000 0.00 0.00 0.00 3.41
2984 5577 1.269166 CGACATAGGCGACAACTGAC 58.731 55.000 0.00 0.00 0.00 3.51
2985 5578 1.402325 CGACATAGGCGACAACTGACA 60.402 52.381 0.00 0.00 0.00 3.58
2986 5579 2.735444 CGACATAGGCGACAACTGACAT 60.735 50.000 0.00 0.00 0.00 3.06
2987 5580 2.604914 GACATAGGCGACAACTGACATG 59.395 50.000 0.00 0.00 0.00 3.21
2988 5581 2.233676 ACATAGGCGACAACTGACATGA 59.766 45.455 0.00 0.00 0.00 3.07
2989 5582 3.261580 CATAGGCGACAACTGACATGAA 58.738 45.455 0.00 0.00 0.00 2.57
2990 5583 1.800805 AGGCGACAACTGACATGAAG 58.199 50.000 0.00 0.00 0.00 3.02
2991 5584 0.166814 GGCGACAACTGACATGAAGC 59.833 55.000 0.00 0.00 0.00 3.86
3278 5873 3.132925 ACATGCAAAATCAAGTGCCAAC 58.867 40.909 0.00 0.00 40.14 3.77
3328 5923 4.680440 GCAAAGGAACTGAAAAGGCTGAAA 60.680 41.667 0.00 0.00 40.86 2.69
3342 5937 2.231235 GGCTGAAACCATACCAAACAGG 59.769 50.000 0.00 0.00 45.67 4.00
3343 5938 2.352715 GCTGAAACCATACCAAACAGGC 60.353 50.000 0.00 0.00 43.14 4.85
3344 5939 2.890311 CTGAAACCATACCAAACAGGCA 59.110 45.455 0.00 0.00 43.14 4.75
3345 5940 3.300388 TGAAACCATACCAAACAGGCAA 58.700 40.909 0.00 0.00 43.14 4.52
3346 5941 3.706594 TGAAACCATACCAAACAGGCAAA 59.293 39.130 0.00 0.00 43.14 3.68
3364 5959 4.497006 GGCAAACTATCACATGCTTAGCAG 60.497 45.833 13.74 7.53 43.65 4.24
3383 5978 2.099263 CAGCCTTCAAGCCATGATCTTG 59.901 50.000 16.66 16.66 41.57 3.02
3437 6032 4.513198 TCCGACATTTGAAATGGTTTCC 57.487 40.909 20.69 5.07 38.90 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.822805 TCAACCTATGTATATAAAGGGATGACC 58.177 37.037 10.34 0.00 40.67 4.02
2 3 9.654663 GTCAACCTATGTATATAAAGGGATGAC 57.345 37.037 19.20 19.20 40.09 3.06
3 4 8.528643 CGTCAACCTATGTATATAAAGGGATGA 58.471 37.037 10.34 10.45 33.16 2.92
4 5 7.277981 GCGTCAACCTATGTATATAAAGGGATG 59.722 40.741 10.34 8.96 33.16 3.51
5 6 7.328737 GCGTCAACCTATGTATATAAAGGGAT 58.671 38.462 10.34 0.00 33.16 3.85
6 7 6.295462 GGCGTCAACCTATGTATATAAAGGGA 60.295 42.308 10.34 0.00 33.16 4.20
7 8 5.873164 GGCGTCAACCTATGTATATAAAGGG 59.127 44.000 10.34 3.59 33.16 3.95
8 9 5.873164 GGGCGTCAACCTATGTATATAAAGG 59.127 44.000 0.00 5.79 35.14 3.11
9 10 5.575606 CGGGCGTCAACCTATGTATATAAAG 59.424 44.000 0.00 0.00 0.00 1.85
10 11 5.472148 CGGGCGTCAACCTATGTATATAAA 58.528 41.667 0.00 0.00 0.00 1.40
11 12 4.618927 GCGGGCGTCAACCTATGTATATAA 60.619 45.833 0.00 0.00 0.00 0.98
12 13 3.119388 GCGGGCGTCAACCTATGTATATA 60.119 47.826 0.00 0.00 0.00 0.86
13 14 2.353406 GCGGGCGTCAACCTATGTATAT 60.353 50.000 0.00 0.00 0.00 0.86
14 15 1.000060 GCGGGCGTCAACCTATGTATA 60.000 52.381 0.00 0.00 0.00 1.47
15 16 0.249741 GCGGGCGTCAACCTATGTAT 60.250 55.000 0.00 0.00 0.00 2.29
16 17 1.142314 GCGGGCGTCAACCTATGTA 59.858 57.895 0.00 0.00 0.00 2.29
17 18 2.125269 GCGGGCGTCAACCTATGT 60.125 61.111 0.00 0.00 0.00 2.29
18 19 2.895372 GGCGGGCGTCAACCTATG 60.895 66.667 0.00 0.00 0.00 2.23
19 20 4.524318 CGGCGGGCGTCAACCTAT 62.524 66.667 16.48 0.00 0.00 2.57
30 31 3.934391 GACTCTGTGAACCGGCGGG 62.934 68.421 31.78 11.36 40.11 6.13
31 32 2.432628 GACTCTGTGAACCGGCGG 60.433 66.667 27.06 27.06 0.00 6.13
32 33 2.432628 GGACTCTGTGAACCGGCG 60.433 66.667 0.00 0.00 0.00 6.46
33 34 2.047179 GGGACTCTGTGAACCGGC 60.047 66.667 0.00 0.00 0.00 6.13
34 35 2.214181 CTCGGGACTCTGTGAACCGG 62.214 65.000 0.00 0.00 44.36 5.28
35 36 1.213013 CTCGGGACTCTGTGAACCG 59.787 63.158 0.00 0.00 45.52 4.44
36 37 1.592223 CCTCGGGACTCTGTGAACC 59.408 63.158 0.00 0.00 0.00 3.62
37 38 1.079750 GCCTCGGGACTCTGTGAAC 60.080 63.158 0.00 0.00 0.00 3.18
38 39 2.283529 GGCCTCGGGACTCTGTGAA 61.284 63.158 0.00 0.00 0.00 3.18
39 40 2.680352 GGCCTCGGGACTCTGTGA 60.680 66.667 0.00 0.00 0.00 3.58
40 41 4.135153 CGGCCTCGGGACTCTGTG 62.135 72.222 0.00 0.00 0.00 3.66
50 51 0.896019 ACCTCTATGATCCGGCCTCG 60.896 60.000 0.00 0.00 0.00 4.63
51 52 0.605589 CACCTCTATGATCCGGCCTC 59.394 60.000 0.00 0.00 0.00 4.70
52 53 0.105453 ACACCTCTATGATCCGGCCT 60.105 55.000 0.00 0.00 0.00 5.19
53 54 0.318762 GACACCTCTATGATCCGGCC 59.681 60.000 0.00 0.00 0.00 6.13
54 55 0.318762 GGACACCTCTATGATCCGGC 59.681 60.000 0.00 0.00 0.00 6.13
55 56 0.598562 CGGACACCTCTATGATCCGG 59.401 60.000 0.00 0.00 46.77 5.14
57 58 0.318762 GCCGGACACCTCTATGATCC 59.681 60.000 5.05 0.00 0.00 3.36
58 59 1.271102 GAGCCGGACACCTCTATGATC 59.729 57.143 5.05 0.00 0.00 2.92
59 60 1.333177 GAGCCGGACACCTCTATGAT 58.667 55.000 5.05 0.00 0.00 2.45
60 61 1.101635 CGAGCCGGACACCTCTATGA 61.102 60.000 5.05 0.00 0.00 2.15
61 62 1.360551 CGAGCCGGACACCTCTATG 59.639 63.158 5.05 0.00 0.00 2.23
62 63 3.843304 CGAGCCGGACACCTCTAT 58.157 61.111 5.05 0.00 0.00 1.98
73 74 0.594110 GAGGAATAGAGACCGAGCCG 59.406 60.000 0.00 0.00 0.00 5.52
74 75 1.989706 AGAGGAATAGAGACCGAGCC 58.010 55.000 0.00 0.00 0.00 4.70
75 76 4.139038 AGTTAGAGGAATAGAGACCGAGC 58.861 47.826 0.00 0.00 0.00 5.03
76 77 6.766944 TGTAAGTTAGAGGAATAGAGACCGAG 59.233 42.308 0.00 0.00 0.00 4.63
77 78 6.656902 TGTAAGTTAGAGGAATAGAGACCGA 58.343 40.000 0.00 0.00 0.00 4.69
78 79 6.939132 TGTAAGTTAGAGGAATAGAGACCG 57.061 41.667 0.00 0.00 0.00 4.79
86 87 8.947115 GCAACTTGTATTGTAAGTTAGAGGAAT 58.053 33.333 0.00 0.00 44.20 3.01
87 88 7.934665 TGCAACTTGTATTGTAAGTTAGAGGAA 59.065 33.333 0.00 0.00 44.20 3.36
88 89 7.446769 TGCAACTTGTATTGTAAGTTAGAGGA 58.553 34.615 0.00 0.00 44.20 3.71
89 90 7.667043 TGCAACTTGTATTGTAAGTTAGAGG 57.333 36.000 0.00 0.00 44.20 3.69
90 91 8.935844 TCATGCAACTTGTATTGTAAGTTAGAG 58.064 33.333 0.00 0.00 44.20 2.43
91 92 8.840833 TCATGCAACTTGTATTGTAAGTTAGA 57.159 30.769 0.00 0.00 44.20 2.10
98 99 8.387354 CGACTTTATCATGCAACTTGTATTGTA 58.613 33.333 0.00 0.00 31.83 2.41
99 100 7.243487 CGACTTTATCATGCAACTTGTATTGT 58.757 34.615 0.00 0.00 31.83 2.71
100 101 6.688385 CCGACTTTATCATGCAACTTGTATTG 59.312 38.462 0.00 0.00 0.00 1.90
101 102 6.374333 ACCGACTTTATCATGCAACTTGTATT 59.626 34.615 0.00 0.00 0.00 1.89
102 103 5.880332 ACCGACTTTATCATGCAACTTGTAT 59.120 36.000 0.00 0.00 0.00 2.29
103 104 5.242434 ACCGACTTTATCATGCAACTTGTA 58.758 37.500 0.00 0.00 0.00 2.41
104 105 4.072131 ACCGACTTTATCATGCAACTTGT 58.928 39.130 0.00 0.00 0.00 3.16
105 106 4.685169 ACCGACTTTATCATGCAACTTG 57.315 40.909 0.00 0.00 0.00 3.16
106 107 4.759693 TGAACCGACTTTATCATGCAACTT 59.240 37.500 0.00 0.00 0.00 2.66
107 108 4.154195 GTGAACCGACTTTATCATGCAACT 59.846 41.667 0.00 0.00 0.00 3.16
108 109 4.083537 TGTGAACCGACTTTATCATGCAAC 60.084 41.667 0.00 0.00 0.00 4.17
109 110 4.068599 TGTGAACCGACTTTATCATGCAA 58.931 39.130 0.00 0.00 0.00 4.08
110 111 3.669536 TGTGAACCGACTTTATCATGCA 58.330 40.909 0.00 0.00 0.00 3.96
111 112 4.572389 AGATGTGAACCGACTTTATCATGC 59.428 41.667 0.00 0.00 0.00 4.06
112 113 6.756542 TGTAGATGTGAACCGACTTTATCATG 59.243 38.462 0.00 0.00 0.00 3.07
113 114 6.873997 TGTAGATGTGAACCGACTTTATCAT 58.126 36.000 0.00 0.00 0.00 2.45
114 115 6.275494 TGTAGATGTGAACCGACTTTATCA 57.725 37.500 0.00 0.00 0.00 2.15
115 116 5.749109 CCTGTAGATGTGAACCGACTTTATC 59.251 44.000 0.00 0.00 0.00 1.75
116 117 5.661458 CCTGTAGATGTGAACCGACTTTAT 58.339 41.667 0.00 0.00 0.00 1.40
117 118 4.619863 GCCTGTAGATGTGAACCGACTTTA 60.620 45.833 0.00 0.00 0.00 1.85
118 119 3.864921 GCCTGTAGATGTGAACCGACTTT 60.865 47.826 0.00 0.00 0.00 2.66
119 120 2.353803 GCCTGTAGATGTGAACCGACTT 60.354 50.000 0.00 0.00 0.00 3.01
120 121 1.204941 GCCTGTAGATGTGAACCGACT 59.795 52.381 0.00 0.00 0.00 4.18
121 122 1.204941 AGCCTGTAGATGTGAACCGAC 59.795 52.381 0.00 0.00 0.00 4.79
122 123 1.557099 AGCCTGTAGATGTGAACCGA 58.443 50.000 0.00 0.00 0.00 4.69
123 124 2.386661 AAGCCTGTAGATGTGAACCG 57.613 50.000 0.00 0.00 0.00 4.44
124 125 5.297029 GGATTAAAGCCTGTAGATGTGAACC 59.703 44.000 0.00 0.00 0.00 3.62
125 126 5.006746 CGGATTAAAGCCTGTAGATGTGAAC 59.993 44.000 0.00 0.00 0.00 3.18
126 127 5.116180 CGGATTAAAGCCTGTAGATGTGAA 58.884 41.667 0.00 0.00 0.00 3.18
127 128 4.693283 CGGATTAAAGCCTGTAGATGTGA 58.307 43.478 0.00 0.00 0.00 3.58
128 129 3.248602 GCGGATTAAAGCCTGTAGATGTG 59.751 47.826 0.00 0.00 0.00 3.21
129 130 3.467803 GCGGATTAAAGCCTGTAGATGT 58.532 45.455 0.00 0.00 0.00 3.06
158 159 2.180674 GCTTTACGAAGGCCCAAGG 58.819 57.895 0.00 0.00 33.34 3.61
170 171 1.130561 GTGAAGATGGTGGCGCTTTAC 59.869 52.381 7.64 4.27 0.00 2.01
171 172 1.271108 TGTGAAGATGGTGGCGCTTTA 60.271 47.619 7.64 0.00 0.00 1.85
172 173 0.537143 TGTGAAGATGGTGGCGCTTT 60.537 50.000 7.64 0.00 0.00 3.51
173 174 0.322816 ATGTGAAGATGGTGGCGCTT 60.323 50.000 7.64 0.00 0.00 4.68
174 175 0.745845 GATGTGAAGATGGTGGCGCT 60.746 55.000 7.64 0.00 0.00 5.92
175 176 0.745845 AGATGTGAAGATGGTGGCGC 60.746 55.000 0.00 0.00 0.00 6.53
176 177 1.667724 GAAGATGTGAAGATGGTGGCG 59.332 52.381 0.00 0.00 0.00 5.69
177 178 2.715046 TGAAGATGTGAAGATGGTGGC 58.285 47.619 0.00 0.00 0.00 5.01
178 179 3.630769 CCATGAAGATGTGAAGATGGTGG 59.369 47.826 0.00 0.00 0.00 4.61
179 180 3.630769 CCCATGAAGATGTGAAGATGGTG 59.369 47.826 0.00 0.00 30.29 4.17
180 181 3.894759 CCCATGAAGATGTGAAGATGGT 58.105 45.455 0.00 0.00 30.29 3.55
181 182 2.621998 GCCCATGAAGATGTGAAGATGG 59.378 50.000 0.00 0.00 0.00 3.51
182 183 3.552875 AGCCCATGAAGATGTGAAGATG 58.447 45.455 0.00 0.00 0.00 2.90
183 184 3.947612 AGCCCATGAAGATGTGAAGAT 57.052 42.857 0.00 0.00 0.00 2.40
184 185 3.265221 AGAAGCCCATGAAGATGTGAAGA 59.735 43.478 0.00 0.00 0.00 2.87
185 186 3.618351 AGAAGCCCATGAAGATGTGAAG 58.382 45.455 0.00 0.00 0.00 3.02
186 187 3.726557 AGAAGCCCATGAAGATGTGAA 57.273 42.857 0.00 0.00 0.00 3.18
187 188 4.657504 AGATAGAAGCCCATGAAGATGTGA 59.342 41.667 0.00 0.00 0.00 3.58
188 189 4.970711 AGATAGAAGCCCATGAAGATGTG 58.029 43.478 0.00 0.00 0.00 3.21
189 190 5.131642 TGAAGATAGAAGCCCATGAAGATGT 59.868 40.000 0.00 0.00 0.00 3.06
190 191 5.618236 TGAAGATAGAAGCCCATGAAGATG 58.382 41.667 0.00 0.00 0.00 2.90
191 192 5.901413 TGAAGATAGAAGCCCATGAAGAT 57.099 39.130 0.00 0.00 0.00 2.40
192 193 5.455755 CCATGAAGATAGAAGCCCATGAAGA 60.456 44.000 0.00 0.00 34.87 2.87
193 194 4.760715 CCATGAAGATAGAAGCCCATGAAG 59.239 45.833 0.00 0.00 34.87 3.02
194 195 4.413189 TCCATGAAGATAGAAGCCCATGAA 59.587 41.667 0.00 0.00 34.87 2.57
195 196 3.975982 TCCATGAAGATAGAAGCCCATGA 59.024 43.478 0.00 0.00 34.87 3.07
196 197 4.325119 CTCCATGAAGATAGAAGCCCATG 58.675 47.826 0.00 0.00 33.28 3.66
197 198 3.330110 CCTCCATGAAGATAGAAGCCCAT 59.670 47.826 0.00 0.00 0.00 4.00
198 199 2.707791 CCTCCATGAAGATAGAAGCCCA 59.292 50.000 0.00 0.00 0.00 5.36
199 200 2.708325 ACCTCCATGAAGATAGAAGCCC 59.292 50.000 0.00 0.00 0.00 5.19
200 201 5.301555 GTTACCTCCATGAAGATAGAAGCC 58.698 45.833 0.00 0.00 0.00 4.35
201 202 5.301555 GGTTACCTCCATGAAGATAGAAGC 58.698 45.833 0.00 0.00 0.00 3.86
202 203 5.509840 CGGGTTACCTCCATGAAGATAGAAG 60.510 48.000 0.00 0.00 33.28 2.85
203 204 4.344102 CGGGTTACCTCCATGAAGATAGAA 59.656 45.833 0.00 0.00 33.28 2.10
204 205 3.895656 CGGGTTACCTCCATGAAGATAGA 59.104 47.826 0.00 0.00 33.28 1.98
205 206 3.006967 CCGGGTTACCTCCATGAAGATAG 59.993 52.174 0.00 0.00 33.28 2.08
206 207 2.969950 CCGGGTTACCTCCATGAAGATA 59.030 50.000 0.00 0.00 33.28 1.98
207 208 1.768870 CCGGGTTACCTCCATGAAGAT 59.231 52.381 0.00 0.00 33.28 2.40
208 209 1.200519 CCGGGTTACCTCCATGAAGA 58.799 55.000 0.00 0.00 33.28 2.87
209 210 0.463833 GCCGGGTTACCTCCATGAAG 60.464 60.000 2.18 0.00 33.28 3.02
210 211 1.605453 GCCGGGTTACCTCCATGAA 59.395 57.895 2.18 0.00 33.28 2.57
211 212 2.372074 GGCCGGGTTACCTCCATGA 61.372 63.158 2.18 0.00 33.28 3.07
212 213 2.192175 GGCCGGGTTACCTCCATG 59.808 66.667 2.18 0.00 33.28 3.66
213 214 2.285818 TGGCCGGGTTACCTCCAT 60.286 61.111 2.18 0.00 33.76 3.41
214 215 3.324108 GTGGCCGGGTTACCTCCA 61.324 66.667 2.18 3.98 35.53 3.86
215 216 3.007323 AGTGGCCGGGTTACCTCC 61.007 66.667 2.18 1.22 33.28 4.30
216 217 2.582978 GAGTGGCCGGGTTACCTC 59.417 66.667 2.18 0.00 33.28 3.85
217 218 2.172229 TAGGAGTGGCCGGGTTACCT 62.172 60.000 2.18 3.64 43.43 3.08
218 219 1.683418 CTAGGAGTGGCCGGGTTACC 61.683 65.000 2.18 0.00 43.43 2.85
219 220 1.821258 CTAGGAGTGGCCGGGTTAC 59.179 63.158 2.18 0.00 43.43 2.50
220 221 2.062177 GCTAGGAGTGGCCGGGTTA 61.062 63.158 2.18 0.00 43.43 2.85
221 222 3.400054 GCTAGGAGTGGCCGGGTT 61.400 66.667 2.18 0.00 43.43 4.11
226 227 1.619807 TAAACCGGCTAGGAGTGGCC 61.620 60.000 0.00 0.00 46.90 5.36
227 228 0.461516 GTAAACCGGCTAGGAGTGGC 60.462 60.000 0.00 0.00 45.00 5.01
228 229 0.177373 GGTAAACCGGCTAGGAGTGG 59.823 60.000 0.00 0.00 45.00 4.00
229 230 1.136500 GAGGTAAACCGGCTAGGAGTG 59.864 57.143 0.00 0.00 45.00 3.51
230 231 1.482954 GAGGTAAACCGGCTAGGAGT 58.517 55.000 0.00 0.00 45.00 3.85
231 232 0.751452 GGAGGTAAACCGGCTAGGAG 59.249 60.000 0.00 0.00 45.00 3.69
232 233 1.039233 CGGAGGTAAACCGGCTAGGA 61.039 60.000 0.00 0.00 45.65 2.94
233 234 1.440476 CGGAGGTAAACCGGCTAGG 59.560 63.158 0.00 0.00 45.65 3.02
247 248 1.724545 TGGGGATATGGTTACCGGAG 58.275 55.000 9.46 0.00 0.00 4.63
248 249 1.770061 GTTGGGGATATGGTTACCGGA 59.230 52.381 9.46 0.00 0.00 5.14
249 250 1.491332 TGTTGGGGATATGGTTACCGG 59.509 52.381 0.00 0.00 0.00 5.28
250 251 2.846193 CTGTTGGGGATATGGTTACCG 58.154 52.381 0.00 0.00 0.00 4.02
251 252 2.092103 TGCTGTTGGGGATATGGTTACC 60.092 50.000 0.00 0.00 0.00 2.85
252 253 3.214328 CTGCTGTTGGGGATATGGTTAC 58.786 50.000 0.00 0.00 0.00 2.50
253 254 2.174639 CCTGCTGTTGGGGATATGGTTA 59.825 50.000 0.00 0.00 0.00 2.85
254 255 1.063717 CCTGCTGTTGGGGATATGGTT 60.064 52.381 0.00 0.00 0.00 3.67
255 256 0.552848 CCTGCTGTTGGGGATATGGT 59.447 55.000 0.00 0.00 0.00 3.55
256 257 0.178981 CCCTGCTGTTGGGGATATGG 60.179 60.000 0.00 0.00 45.18 2.74
257 258 3.426903 CCCTGCTGTTGGGGATATG 57.573 57.895 0.00 0.00 45.18 1.78
264 265 4.684134 CCCCACCCCTGCTGTTGG 62.684 72.222 0.00 0.00 0.00 3.77
268 269 4.305956 AAAGCCCCACCCCTGCTG 62.306 66.667 0.00 0.00 35.08 4.41
269 270 3.984732 GAAAGCCCCACCCCTGCT 61.985 66.667 0.00 0.00 36.79 4.24
271 272 3.589542 TGGAAAGCCCCACCCCTG 61.590 66.667 0.00 0.00 0.00 4.45
272 273 3.268032 CTGGAAAGCCCCACCCCT 61.268 66.667 0.00 0.00 31.85 4.79
281 282 0.391661 TGATCGACAGGCTGGAAAGC 60.392 55.000 20.34 6.52 0.00 3.51
282 283 2.322355 ATGATCGACAGGCTGGAAAG 57.678 50.000 20.34 6.93 0.00 2.62
283 284 2.358957 CAATGATCGACAGGCTGGAAA 58.641 47.619 20.34 3.31 0.00 3.13
284 285 1.407299 CCAATGATCGACAGGCTGGAA 60.407 52.381 20.34 3.70 32.06 3.53
285 286 0.178767 CCAATGATCGACAGGCTGGA 59.821 55.000 20.34 7.73 32.06 3.86
286 287 0.816825 CCCAATGATCGACAGGCTGG 60.817 60.000 20.34 1.44 0.00 4.85
287 288 0.107508 ACCCAATGATCGACAGGCTG 60.108 55.000 14.16 14.16 0.00 4.85
288 289 0.179000 GACCCAATGATCGACAGGCT 59.821 55.000 0.00 0.00 0.00 4.58
289 290 0.815615 GGACCCAATGATCGACAGGC 60.816 60.000 0.00 0.00 0.00 4.85
290 291 0.530650 CGGACCCAATGATCGACAGG 60.531 60.000 0.00 0.00 0.00 4.00
291 292 0.530650 CCGGACCCAATGATCGACAG 60.531 60.000 0.00 0.00 0.00 3.51
292 293 0.973496 TCCGGACCCAATGATCGACA 60.973 55.000 0.00 0.00 0.00 4.35
293 294 0.177141 TTCCGGACCCAATGATCGAC 59.823 55.000 1.83 0.00 0.00 4.20
294 295 0.177141 GTTCCGGACCCAATGATCGA 59.823 55.000 1.83 0.00 0.00 3.59
295 296 1.151777 CGTTCCGGACCCAATGATCG 61.152 60.000 1.83 0.00 0.00 3.69
296 297 0.177141 TCGTTCCGGACCCAATGATC 59.823 55.000 1.83 0.00 0.00 2.92
297 298 0.107848 GTCGTTCCGGACCCAATGAT 60.108 55.000 1.83 0.00 0.00 2.45
298 299 1.294138 GTCGTTCCGGACCCAATGA 59.706 57.895 1.83 0.00 0.00 2.57
299 300 3.884900 GTCGTTCCGGACCCAATG 58.115 61.111 1.83 0.00 0.00 2.82
318 319 2.110352 GCCCAACCCCGACATTACG 61.110 63.158 0.00 0.00 0.00 3.18
319 320 1.001887 TGCCCAACCCCGACATTAC 60.002 57.895 0.00 0.00 0.00 1.89
320 321 1.202099 TCTGCCCAACCCCGACATTA 61.202 55.000 0.00 0.00 0.00 1.90
321 322 2.035626 CTGCCCAACCCCGACATT 59.964 61.111 0.00 0.00 0.00 2.71
322 323 2.075355 TTTCTGCCCAACCCCGACAT 62.075 55.000 0.00 0.00 0.00 3.06
323 324 2.285889 TTTTCTGCCCAACCCCGACA 62.286 55.000 0.00 0.00 0.00 4.35
324 325 1.524008 CTTTTCTGCCCAACCCCGAC 61.524 60.000 0.00 0.00 0.00 4.79
325 326 1.228429 CTTTTCTGCCCAACCCCGA 60.228 57.895 0.00 0.00 0.00 5.14
326 327 2.931068 GCTTTTCTGCCCAACCCCG 61.931 63.158 0.00 0.00 0.00 5.73
327 328 1.533994 AGCTTTTCTGCCCAACCCC 60.534 57.895 0.00 0.00 0.00 4.95
328 329 0.540597 AGAGCTTTTCTGCCCAACCC 60.541 55.000 0.00 0.00 33.93 4.11
329 330 0.884514 GAGAGCTTTTCTGCCCAACC 59.115 55.000 0.00 0.00 35.87 3.77
330 331 1.538950 CAGAGAGCTTTTCTGCCCAAC 59.461 52.381 14.02 0.00 35.87 3.77
331 332 1.901591 CAGAGAGCTTTTCTGCCCAA 58.098 50.000 14.02 0.00 35.87 4.12
332 333 3.639099 CAGAGAGCTTTTCTGCCCA 57.361 52.632 14.02 0.00 35.87 5.36
336 337 2.225963 CCACTTGCAGAGAGCTTTTCTG 59.774 50.000 19.44 19.44 45.94 3.02
337 338 2.502295 CCACTTGCAGAGAGCTTTTCT 58.498 47.619 0.00 0.00 45.94 2.52
338 339 1.538950 CCCACTTGCAGAGAGCTTTTC 59.461 52.381 0.00 0.00 45.94 2.29
339 340 1.143684 TCCCACTTGCAGAGAGCTTTT 59.856 47.619 0.00 0.00 45.94 2.27
340 341 0.767375 TCCCACTTGCAGAGAGCTTT 59.233 50.000 0.00 0.00 45.94 3.51
341 342 0.990374 ATCCCACTTGCAGAGAGCTT 59.010 50.000 0.00 0.00 45.94 3.74
342 343 0.252479 CATCCCACTTGCAGAGAGCT 59.748 55.000 0.00 0.00 45.94 4.09
343 344 0.035630 ACATCCCACTTGCAGAGAGC 60.036 55.000 3.37 0.00 45.96 4.09
344 345 2.741228 GCTACATCCCACTTGCAGAGAG 60.741 54.545 3.37 0.00 0.00 3.20
345 346 1.208052 GCTACATCCCACTTGCAGAGA 59.792 52.381 3.37 0.00 0.00 3.10
346 347 1.661341 GCTACATCCCACTTGCAGAG 58.339 55.000 0.00 0.00 0.00 3.35
347 348 0.108186 CGCTACATCCCACTTGCAGA 60.108 55.000 0.00 0.00 0.00 4.26
348 349 1.709147 GCGCTACATCCCACTTGCAG 61.709 60.000 0.00 0.00 0.00 4.41
349 350 1.745115 GCGCTACATCCCACTTGCA 60.745 57.895 0.00 0.00 0.00 4.08
350 351 1.305219 TTGCGCTACATCCCACTTGC 61.305 55.000 9.73 0.00 0.00 4.01
351 352 1.164411 TTTGCGCTACATCCCACTTG 58.836 50.000 9.73 0.00 0.00 3.16
352 353 1.539827 GTTTTGCGCTACATCCCACTT 59.460 47.619 9.73 0.00 0.00 3.16
353 354 1.165270 GTTTTGCGCTACATCCCACT 58.835 50.000 9.73 0.00 0.00 4.00
354 355 0.179200 CGTTTTGCGCTACATCCCAC 60.179 55.000 9.73 0.00 0.00 4.61
355 356 1.302383 CCGTTTTGCGCTACATCCCA 61.302 55.000 9.73 0.00 39.71 4.37
356 357 1.303091 ACCGTTTTGCGCTACATCCC 61.303 55.000 9.73 0.00 39.71 3.85
357 358 0.096454 GACCGTTTTGCGCTACATCC 59.904 55.000 9.73 0.00 39.71 3.51
358 359 0.247145 CGACCGTTTTGCGCTACATC 60.247 55.000 9.73 4.32 39.71 3.06
359 360 1.785321 CGACCGTTTTGCGCTACAT 59.215 52.632 9.73 0.00 39.71 2.29
360 361 2.945615 GCGACCGTTTTGCGCTACA 61.946 57.895 9.73 0.00 46.53 2.74
361 362 2.202133 GCGACCGTTTTGCGCTAC 60.202 61.111 9.73 3.21 46.53 3.58
367 368 4.383602 CCAGCCGCGACCGTTTTG 62.384 66.667 8.23 0.00 0.00 2.44
368 369 4.612412 TCCAGCCGCGACCGTTTT 62.612 61.111 8.23 0.00 0.00 2.43
372 373 3.636313 TTTAGTCCAGCCGCGACCG 62.636 63.158 8.23 0.00 0.00 4.79
373 374 0.743345 ATTTTAGTCCAGCCGCGACC 60.743 55.000 8.23 0.00 0.00 4.79
374 375 1.084289 AATTTTAGTCCAGCCGCGAC 58.916 50.000 8.23 0.00 0.00 5.19
375 376 1.083489 CAATTTTAGTCCAGCCGCGA 58.917 50.000 8.23 0.00 0.00 5.87
376 377 1.062587 CTCAATTTTAGTCCAGCCGCG 59.937 52.381 0.00 0.00 0.00 6.46
377 378 1.401905 CCTCAATTTTAGTCCAGCCGC 59.598 52.381 0.00 0.00 0.00 6.53
378 379 1.401905 GCCTCAATTTTAGTCCAGCCG 59.598 52.381 0.00 0.00 0.00 5.52
379 380 2.164422 GTGCCTCAATTTTAGTCCAGCC 59.836 50.000 0.00 0.00 0.00 4.85
380 381 2.159517 CGTGCCTCAATTTTAGTCCAGC 60.160 50.000 0.00 0.00 0.00 4.85
381 382 3.334691 TCGTGCCTCAATTTTAGTCCAG 58.665 45.455 0.00 0.00 0.00 3.86
382 383 3.007506 TCTCGTGCCTCAATTTTAGTCCA 59.992 43.478 0.00 0.00 0.00 4.02
383 384 3.596214 TCTCGTGCCTCAATTTTAGTCC 58.404 45.455 0.00 0.00 0.00 3.85
384 385 5.463724 CCTATCTCGTGCCTCAATTTTAGTC 59.536 44.000 0.00 0.00 0.00 2.59
385 386 5.104900 ACCTATCTCGTGCCTCAATTTTAGT 60.105 40.000 0.00 0.00 0.00 2.24
386 387 5.360591 ACCTATCTCGTGCCTCAATTTTAG 58.639 41.667 0.00 0.00 0.00 1.85
387 388 5.353394 ACCTATCTCGTGCCTCAATTTTA 57.647 39.130 0.00 0.00 0.00 1.52
388 389 4.222124 ACCTATCTCGTGCCTCAATTTT 57.778 40.909 0.00 0.00 0.00 1.82
389 390 3.914426 ACCTATCTCGTGCCTCAATTT 57.086 42.857 0.00 0.00 0.00 1.82
390 391 3.914426 AACCTATCTCGTGCCTCAATT 57.086 42.857 0.00 0.00 0.00 2.32
391 392 3.914426 AAACCTATCTCGTGCCTCAAT 57.086 42.857 0.00 0.00 0.00 2.57
392 393 3.695830 AAAACCTATCTCGTGCCTCAA 57.304 42.857 0.00 0.00 0.00 3.02
393 394 3.334691 CAAAAACCTATCTCGTGCCTCA 58.665 45.455 0.00 0.00 0.00 3.86
394 395 2.678336 CCAAAAACCTATCTCGTGCCTC 59.322 50.000 0.00 0.00 0.00 4.70
395 396 2.618045 CCCAAAAACCTATCTCGTGCCT 60.618 50.000 0.00 0.00 0.00 4.75
396 397 1.743394 CCCAAAAACCTATCTCGTGCC 59.257 52.381 0.00 0.00 0.00 5.01
397 398 1.743394 CCCCAAAAACCTATCTCGTGC 59.257 52.381 0.00 0.00 0.00 5.34
398 399 2.026636 TCCCCCAAAAACCTATCTCGTG 60.027 50.000 0.00 0.00 0.00 4.35
399 400 2.271777 TCCCCCAAAAACCTATCTCGT 58.728 47.619 0.00 0.00 0.00 4.18
400 401 3.359695 TTCCCCCAAAAACCTATCTCG 57.640 47.619 0.00 0.00 0.00 4.04
401 402 5.084519 ACTTTTCCCCCAAAAACCTATCTC 58.915 41.667 0.00 0.00 33.40 2.75
402 403 5.084519 GACTTTTCCCCCAAAAACCTATCT 58.915 41.667 0.00 0.00 33.40 1.98
403 404 4.836175 TGACTTTTCCCCCAAAAACCTATC 59.164 41.667 0.00 0.00 33.40 2.08
404 405 4.821940 TGACTTTTCCCCCAAAAACCTAT 58.178 39.130 0.00 0.00 33.40 2.57
405 406 4.267341 TGACTTTTCCCCCAAAAACCTA 57.733 40.909 0.00 0.00 33.40 3.08
406 407 3.123392 TGACTTTTCCCCCAAAAACCT 57.877 42.857 0.00 0.00 33.40 3.50
407 408 4.102524 AGAATGACTTTTCCCCCAAAAACC 59.897 41.667 0.00 0.00 33.40 3.27
408 409 5.290493 AGAATGACTTTTCCCCCAAAAAC 57.710 39.130 0.00 0.00 33.40 2.43
409 410 5.542251 CCTAGAATGACTTTTCCCCCAAAAA 59.458 40.000 0.00 0.00 33.40 1.94
410 411 5.083821 CCTAGAATGACTTTTCCCCCAAAA 58.916 41.667 0.00 0.00 32.77 2.44
411 412 4.355588 TCCTAGAATGACTTTTCCCCCAAA 59.644 41.667 0.00 0.00 0.00 3.28
412 413 3.920197 TCCTAGAATGACTTTTCCCCCAA 59.080 43.478 0.00 0.00 0.00 4.12
413 414 3.537337 TCCTAGAATGACTTTTCCCCCA 58.463 45.455 0.00 0.00 0.00 4.96
414 415 4.270834 GTTCCTAGAATGACTTTTCCCCC 58.729 47.826 0.00 0.00 0.00 5.40
415 416 3.939592 CGTTCCTAGAATGACTTTTCCCC 59.060 47.826 0.00 0.00 0.00 4.81
416 417 3.939592 CCGTTCCTAGAATGACTTTTCCC 59.060 47.826 0.00 0.00 0.00 3.97
417 418 3.939592 CCCGTTCCTAGAATGACTTTTCC 59.060 47.826 0.00 0.00 0.00 3.13
418 419 4.828829 TCCCGTTCCTAGAATGACTTTTC 58.171 43.478 0.00 0.00 0.00 2.29
419 420 4.903045 TCCCGTTCCTAGAATGACTTTT 57.097 40.909 0.00 0.00 0.00 2.27
420 421 5.186198 CAATCCCGTTCCTAGAATGACTTT 58.814 41.667 0.00 0.00 0.00 2.66
421 422 4.770795 CAATCCCGTTCCTAGAATGACTT 58.229 43.478 0.00 0.00 0.00 3.01
422 423 3.432326 GCAATCCCGTTCCTAGAATGACT 60.432 47.826 0.00 0.00 0.00 3.41
423 424 2.872858 GCAATCCCGTTCCTAGAATGAC 59.127 50.000 0.00 0.00 0.00 3.06
424 425 2.483013 CGCAATCCCGTTCCTAGAATGA 60.483 50.000 0.00 0.00 0.00 2.57
425 426 1.867233 CGCAATCCCGTTCCTAGAATG 59.133 52.381 0.00 0.00 0.00 2.67
426 427 1.760613 TCGCAATCCCGTTCCTAGAAT 59.239 47.619 0.00 0.00 0.00 2.40
427 428 1.187974 TCGCAATCCCGTTCCTAGAA 58.812 50.000 0.00 0.00 0.00 2.10
428 429 1.136305 CTTCGCAATCCCGTTCCTAGA 59.864 52.381 0.00 0.00 0.00 2.43
429 430 1.134788 ACTTCGCAATCCCGTTCCTAG 60.135 52.381 0.00 0.00 0.00 3.02
430 431 0.899720 ACTTCGCAATCCCGTTCCTA 59.100 50.000 0.00 0.00 0.00 2.94
431 432 0.391263 GACTTCGCAATCCCGTTCCT 60.391 55.000 0.00 0.00 0.00 3.36
432 433 1.693083 CGACTTCGCAATCCCGTTCC 61.693 60.000 0.00 0.00 0.00 3.62
433 434 1.708027 CGACTTCGCAATCCCGTTC 59.292 57.895 0.00 0.00 0.00 3.95
434 435 3.870606 CGACTTCGCAATCCCGTT 58.129 55.556 0.00 0.00 0.00 4.44
444 445 0.366871 CTCAATTGACCGCGACTTCG 59.633 55.000 8.23 0.00 43.27 3.79
445 446 1.390463 GTCTCAATTGACCGCGACTTC 59.610 52.381 8.23 0.78 0.00 3.01
446 447 1.000955 AGTCTCAATTGACCGCGACTT 59.999 47.619 17.78 6.86 37.66 3.01
447 448 0.603569 AGTCTCAATTGACCGCGACT 59.396 50.000 17.78 17.78 37.66 4.18
448 449 1.429463 AAGTCTCAATTGACCGCGAC 58.571 50.000 8.23 14.58 37.66 5.19
449 450 2.991190 GTTAAGTCTCAATTGACCGCGA 59.009 45.455 8.23 0.00 37.66 5.87
450 451 2.993899 AGTTAAGTCTCAATTGACCGCG 59.006 45.455 3.38 0.00 37.66 6.46
451 452 5.638234 ACTTAGTTAAGTCTCAATTGACCGC 59.362 40.000 3.38 0.00 42.52 5.68
493 494 8.128582 GCACCGAATCTCAACATAAAATTATGA 58.871 33.333 17.63 0.00 42.38 2.15
494 495 7.914871 TGCACCGAATCTCAACATAAAATTATG 59.085 33.333 10.79 10.79 44.66 1.90
495 496 7.995289 TGCACCGAATCTCAACATAAAATTAT 58.005 30.769 0.00 0.00 0.00 1.28
496 497 7.384439 TGCACCGAATCTCAACATAAAATTA 57.616 32.000 0.00 0.00 0.00 1.40
497 498 6.266168 TGCACCGAATCTCAACATAAAATT 57.734 33.333 0.00 0.00 0.00 1.82
498 499 5.895636 TGCACCGAATCTCAACATAAAAT 57.104 34.783 0.00 0.00 0.00 1.82
499 500 5.697473 TTGCACCGAATCTCAACATAAAA 57.303 34.783 0.00 0.00 0.00 1.52
500 501 5.697473 TTTGCACCGAATCTCAACATAAA 57.303 34.783 0.00 0.00 0.00 1.40
590 591 4.985409 GTGTCTTGGTCTTAGTTGACTGAG 59.015 45.833 0.00 0.00 37.16 3.35
592 593 4.693283 TGTGTCTTGGTCTTAGTTGACTG 58.307 43.478 0.00 0.00 37.16 3.51
594 595 4.272748 GGTTGTGTCTTGGTCTTAGTTGAC 59.727 45.833 0.00 0.00 36.31 3.18
595 596 4.163458 AGGTTGTGTCTTGGTCTTAGTTGA 59.837 41.667 0.00 0.00 0.00 3.18
596 597 4.451900 AGGTTGTGTCTTGGTCTTAGTTG 58.548 43.478 0.00 0.00 0.00 3.16
597 598 4.772886 AGGTTGTGTCTTGGTCTTAGTT 57.227 40.909 0.00 0.00 0.00 2.24
598 599 4.444449 GGAAGGTTGTGTCTTGGTCTTAGT 60.444 45.833 0.00 0.00 0.00 2.24
599 600 4.065789 GGAAGGTTGTGTCTTGGTCTTAG 58.934 47.826 0.00 0.00 0.00 2.18
600 601 3.456644 TGGAAGGTTGTGTCTTGGTCTTA 59.543 43.478 0.00 0.00 0.00 2.10
601 602 2.241176 TGGAAGGTTGTGTCTTGGTCTT 59.759 45.455 0.00 0.00 0.00 3.01
607 608 7.595819 TTATTTTCATGGAAGGTTGTGTCTT 57.404 32.000 0.00 0.00 0.00 3.01
615 616 7.754091 ATCCCAATTTATTTTCATGGAAGGT 57.246 32.000 0.00 0.00 32.82 3.50
617 618 9.211485 GCATATCCCAATTTATTTTCATGGAAG 57.789 33.333 0.00 0.00 32.82 3.46
618 619 8.936787 AGCATATCCCAATTTATTTTCATGGAA 58.063 29.630 0.00 0.00 32.82 3.53
620 621 9.865321 CTAGCATATCCCAATTTATTTTCATGG 57.135 33.333 0.00 0.00 0.00 3.66
630 631 8.497745 CCCTGTATATCTAGCATATCCCAATTT 58.502 37.037 0.00 0.00 0.00 1.82
631 632 7.851451 TCCCTGTATATCTAGCATATCCCAATT 59.149 37.037 0.00 0.00 0.00 2.32
632 633 7.373463 TCCCTGTATATCTAGCATATCCCAAT 58.627 38.462 0.00 0.00 0.00 3.16
633 634 6.752091 TCCCTGTATATCTAGCATATCCCAA 58.248 40.000 0.00 0.00 0.00 4.12
634 635 6.355588 TCCCTGTATATCTAGCATATCCCA 57.644 41.667 0.00 0.00 0.00 4.37
635 636 7.863901 AATCCCTGTATATCTAGCATATCCC 57.136 40.000 0.00 0.00 0.00 3.85
657 658 6.407202 CGTGCTAAGCTATTAGGGGATTAAT 58.593 40.000 0.00 0.00 39.10 1.40
662 663 1.343465 GCGTGCTAAGCTATTAGGGGA 59.657 52.381 0.00 0.00 39.10 4.81
668 669 3.648009 GAGAGATGCGTGCTAAGCTATT 58.352 45.455 0.00 0.00 35.28 1.73
670 671 1.002359 CGAGAGATGCGTGCTAAGCTA 60.002 52.381 0.00 0.00 35.28 3.32
671 672 0.248825 CGAGAGATGCGTGCTAAGCT 60.249 55.000 0.00 0.00 35.28 3.74
677 693 4.854784 TCGGCGAGAGATGCGTGC 62.855 66.667 4.99 0.00 0.00 5.34
715 731 4.571580 TGACAATTTTGCTTCAAAAGGCAG 59.428 37.500 10.02 3.73 44.72 4.85
723 739 4.751767 AAAGGGTGACAATTTTGCTTCA 57.248 36.364 0.00 0.00 0.00 3.02
787 804 2.260869 TGAAGCTTTGAGGCGCACC 61.261 57.895 10.83 0.00 37.29 5.01
867 884 6.259608 GCTACTTCAGTTCATAATGCATCTGT 59.740 38.462 0.00 0.00 0.00 3.41
877 894 5.182570 AGTGTACGTGCTACTTCAGTTCATA 59.817 40.000 4.97 0.00 0.00 2.15
907 924 3.796504 GCATTATCACAGCCGGAAATTGG 60.797 47.826 5.05 0.00 0.00 3.16
910 927 1.603802 CGCATTATCACAGCCGGAAAT 59.396 47.619 5.05 0.00 0.00 2.17
921 938 3.493129 GCTACGATGTTTCCGCATTATCA 59.507 43.478 0.00 0.00 0.00 2.15
937 954 1.378911 TCCCCTTGCTACGCTACGA 60.379 57.895 0.00 0.00 0.00 3.43
964 981 5.587043 CAGTCTAGTAGTGTTCCTCGAGATT 59.413 44.000 15.71 0.00 0.00 2.40
987 1004 1.205655 CAACTAGCTCTAGCACTGGCA 59.794 52.381 4.54 0.00 45.16 4.92
988 1005 1.205893 ACAACTAGCTCTAGCACTGGC 59.794 52.381 4.54 0.00 45.16 4.85
989 1006 3.257393 CAACAACTAGCTCTAGCACTGG 58.743 50.000 4.54 0.00 45.16 4.00
990 1007 2.670414 GCAACAACTAGCTCTAGCACTG 59.330 50.000 4.54 2.74 45.16 3.66
991 1008 2.354203 GGCAACAACTAGCTCTAGCACT 60.354 50.000 4.54 0.00 45.16 4.40
992 1009 2.003301 GGCAACAACTAGCTCTAGCAC 58.997 52.381 4.54 0.00 45.16 4.40
1095 1118 3.838271 ATCGCCGCACCGAGATGT 61.838 61.111 2.17 0.00 40.97 3.06
1097 1120 4.592192 CCATCGCCGCACCGAGAT 62.592 66.667 2.17 0.00 40.97 2.75
1797 1820 2.729882 GGTGTAGTTCTTGCACGTGTAG 59.270 50.000 18.38 14.66 42.63 2.74
2073 2099 1.227734 CACGAACCGGTTGAAGGGT 60.228 57.895 27.87 11.41 38.44 4.34
2366 4890 4.148825 CCCCCAGGTCGAGCTTCG 62.149 72.222 15.83 7.94 42.10 3.79
2437 4962 1.596752 AACATGACACAAGGCGCGA 60.597 52.632 12.10 0.00 0.00 5.87
2439 4964 1.081242 CCAACATGACACAAGGCGC 60.081 57.895 0.00 0.00 0.00 6.53
2452 4982 6.039616 GCAGTGAAGAAACAAATTACCAACA 58.960 36.000 0.00 0.00 0.00 3.33
2460 4990 4.160252 ACAACTGGCAGTGAAGAAACAAAT 59.840 37.500 22.83 0.00 0.00 2.32
2468 4998 3.119531 TCAAAACACAACTGGCAGTGAAG 60.120 43.478 22.83 16.32 39.03 3.02
2469 4999 2.822561 TCAAAACACAACTGGCAGTGAA 59.177 40.909 22.83 0.00 39.03 3.18
2471 5001 2.480073 CCTCAAAACACAACTGGCAGTG 60.480 50.000 22.83 17.05 41.40 3.66
2477 5007 2.023673 TGCTCCCTCAAAACACAACTG 58.976 47.619 0.00 0.00 0.00 3.16
2478 5008 2.435372 TGCTCCCTCAAAACACAACT 57.565 45.000 0.00 0.00 0.00 3.16
2479 5009 4.846779 TTATGCTCCCTCAAAACACAAC 57.153 40.909 0.00 0.00 0.00 3.32
2480 5010 5.538053 TCAATTATGCTCCCTCAAAACACAA 59.462 36.000 0.00 0.00 0.00 3.33
2484 5014 7.333528 TGTATCAATTATGCTCCCTCAAAAC 57.666 36.000 0.00 0.00 0.00 2.43
2486 5016 7.289310 TCATGTATCAATTATGCTCCCTCAAA 58.711 34.615 0.00 0.00 0.00 2.69
2490 5020 7.062322 TGTTTCATGTATCAATTATGCTCCCT 58.938 34.615 0.00 0.00 0.00 4.20
2492 5022 7.365741 CCTGTTTCATGTATCAATTATGCTCC 58.634 38.462 0.00 0.00 0.00 4.70
2494 5024 6.835488 ACCCTGTTTCATGTATCAATTATGCT 59.165 34.615 0.00 0.00 0.00 3.79
2495 5025 7.042797 ACCCTGTTTCATGTATCAATTATGC 57.957 36.000 0.00 0.00 0.00 3.14
2513 5043 8.309656 GCGTACCTATAATTATCTTAACCCTGT 58.690 37.037 0.00 0.00 0.00 4.00
2514 5044 7.487189 CGCGTACCTATAATTATCTTAACCCTG 59.513 40.741 0.00 0.00 0.00 4.45
2515 5045 7.177392 ACGCGTACCTATAATTATCTTAACCCT 59.823 37.037 11.67 0.00 0.00 4.34
2516 5046 7.274250 CACGCGTACCTATAATTATCTTAACCC 59.726 40.741 13.44 0.00 0.00 4.11
2517 5047 8.023128 TCACGCGTACCTATAATTATCTTAACC 58.977 37.037 13.44 0.00 0.00 2.85
2518 5048 8.955061 TCACGCGTACCTATAATTATCTTAAC 57.045 34.615 13.44 0.00 0.00 2.01
2519 5049 7.752239 GCTCACGCGTACCTATAATTATCTTAA 59.248 37.037 13.44 0.00 0.00 1.85
2520 5050 7.094677 TGCTCACGCGTACCTATAATTATCTTA 60.095 37.037 13.44 0.00 39.65 2.10
2521 5051 6.091437 GCTCACGCGTACCTATAATTATCTT 58.909 40.000 13.44 0.00 0.00 2.40
2522 5052 5.182570 TGCTCACGCGTACCTATAATTATCT 59.817 40.000 13.44 0.00 39.65 1.98
2523 5053 5.396484 TGCTCACGCGTACCTATAATTATC 58.604 41.667 13.44 0.00 39.65 1.75
2524 5054 5.381174 TGCTCACGCGTACCTATAATTAT 57.619 39.130 13.44 2.97 39.65 1.28
2525 5055 4.834357 TGCTCACGCGTACCTATAATTA 57.166 40.909 13.44 0.00 39.65 1.40
2526 5056 3.720949 TGCTCACGCGTACCTATAATT 57.279 42.857 13.44 0.00 39.65 1.40
2527 5057 3.936372 ATGCTCACGCGTACCTATAAT 57.064 42.857 13.44 0.00 39.65 1.28
2535 5065 0.170784 TTTCGGTATGCTCACGCGTA 59.829 50.000 13.44 0.00 39.65 4.42
2536 5066 0.459585 ATTTCGGTATGCTCACGCGT 60.460 50.000 5.58 5.58 39.65 6.01
2537 5067 0.043053 CATTTCGGTATGCTCACGCG 60.043 55.000 3.53 3.53 39.65 6.01
2538 5068 0.304705 CCATTTCGGTATGCTCACGC 59.695 55.000 0.00 0.00 0.00 5.34
2539 5069 0.304705 GCCATTTCGGTATGCTCACG 59.695 55.000 0.00 0.00 36.97 4.35
2540 5070 0.304705 CGCCATTTCGGTATGCTCAC 59.695 55.000 0.00 0.00 36.97 3.51
2541 5071 0.176910 TCGCCATTTCGGTATGCTCA 59.823 50.000 0.00 0.00 36.97 4.26
2542 5072 1.295792 TTCGCCATTTCGGTATGCTC 58.704 50.000 0.00 0.00 36.97 4.26
2543 5073 1.745232 TTTCGCCATTTCGGTATGCT 58.255 45.000 0.00 0.00 36.97 3.79
2544 5074 2.774439 ATTTCGCCATTTCGGTATGC 57.226 45.000 0.00 0.00 36.97 3.14
2545 5075 3.790820 CACAATTTCGCCATTTCGGTATG 59.209 43.478 0.00 0.00 36.97 2.39
2546 5076 3.181491 CCACAATTTCGCCATTTCGGTAT 60.181 43.478 0.00 0.00 36.97 2.73
2547 5077 2.162608 CCACAATTTCGCCATTTCGGTA 59.837 45.455 0.00 0.00 36.97 4.02
2548 5078 1.067915 CCACAATTTCGCCATTTCGGT 60.068 47.619 0.00 0.00 36.97 4.69
2549 5079 1.627879 CCACAATTTCGCCATTTCGG 58.372 50.000 0.00 0.00 38.11 4.30
2550 5080 0.991344 GCCACAATTTCGCCATTTCG 59.009 50.000 0.00 0.00 0.00 3.46
2553 5083 2.540265 TTTGCCACAATTTCGCCATT 57.460 40.000 0.00 0.00 0.00 3.16
2557 5087 5.335827 TGTAAAATTTGCCACAATTTCGC 57.664 34.783 0.00 0.00 0.00 4.70
2563 5093 7.930325 TCAGAAATCATGTAAAATTTGCCACAA 59.070 29.630 0.00 0.00 0.00 3.33
2585 5115 9.388506 GGATTATTCTTCTGTGAATCTTTCAGA 57.611 33.333 0.00 0.00 41.01 3.27
2590 5120 7.066766 GCACTGGATTATTCTTCTGTGAATCTT 59.933 37.037 0.00 0.00 37.73 2.40
2592 5122 6.317140 TGCACTGGATTATTCTTCTGTGAATC 59.683 38.462 0.00 0.00 37.73 2.52
2619 5149 4.990257 CAGGAGGTTTTATCATGCAACAG 58.010 43.478 0.00 0.00 0.00 3.16
2625 5155 4.442706 ACGTAGCAGGAGGTTTTATCATG 58.557 43.478 0.00 0.00 0.00 3.07
2648 5178 0.541863 ATTAAGCTGCTACCCGTGCT 59.458 50.000 0.90 0.00 37.37 4.40
2663 5193 3.125146 GTGCTGCGTCTGACATGAATTAA 59.875 43.478 8.73 0.00 0.00 1.40
2692 5249 5.587844 AGAAGATTGGAGTACATGAATGCAC 59.412 40.000 0.00 0.00 0.00 4.57
2700 5257 4.163078 CCCTGACAGAAGATTGGAGTACAT 59.837 45.833 3.32 0.00 0.00 2.29
2705 5262 2.568956 TGTCCCTGACAGAAGATTGGAG 59.431 50.000 3.32 0.00 37.67 3.86
2706 5263 2.619931 TGTCCCTGACAGAAGATTGGA 58.380 47.619 3.32 0.00 37.67 3.53
2720 5277 5.830991 GTGAGACTTCAGTATATCTGTCCCT 59.169 44.000 0.00 0.00 43.97 4.20
2722 5279 5.594725 TGGTGAGACTTCAGTATATCTGTCC 59.405 44.000 0.00 0.00 43.97 4.02
2727 5284 8.200792 ACTGATTTGGTGAGACTTCAGTATATC 58.799 37.037 2.55 0.00 41.32 1.63
2763 5320 9.420551 GCCAGTAGGTATCTAAACATGTTATAC 57.579 37.037 12.39 15.09 37.19 1.47
2772 5332 5.559799 CGACGTAGCCAGTAGGTATCTAAAC 60.560 48.000 0.00 0.00 37.19 2.01
2791 5352 1.268625 TGCTTACATCTCACACGACGT 59.731 47.619 0.00 0.00 0.00 4.34
2795 5356 1.713597 TGCTGCTTACATCTCACACG 58.286 50.000 0.00 0.00 0.00 4.49
2799 5360 3.126073 CGCTAATGCTGCTTACATCTCA 58.874 45.455 0.00 0.00 36.97 3.27
2801 5362 1.869767 GCGCTAATGCTGCTTACATCT 59.130 47.619 0.00 0.00 36.40 2.90
2802 5363 1.869767 AGCGCTAATGCTGCTTACATC 59.130 47.619 8.99 0.00 45.28 3.06
2812 5380 3.309682 TGATCACTAAACAGCGCTAATGC 59.690 43.478 10.99 0.00 0.00 3.56
2816 5384 2.540515 GCTGATCACTAAACAGCGCTA 58.459 47.619 10.99 0.00 45.25 4.26
2818 5386 3.885777 GCTGATCACTAAACAGCGC 57.114 52.632 0.00 0.00 45.25 5.92
2828 5396 5.048852 AGCTTCTTCTTCTTTTGCTGATCAC 60.049 40.000 0.00 0.00 0.00 3.06
2837 5405 7.264373 TCGAAATCAAGCTTCTTCTTCTTTT 57.736 32.000 0.00 0.00 0.00 2.27
2841 5409 6.312426 TCTGATCGAAATCAAGCTTCTTCTTC 59.688 38.462 0.00 0.00 41.33 2.87
2856 5424 6.340522 TGTAGATGCAGATTTCTGATCGAAA 58.659 36.000 11.70 12.77 46.59 3.46
2877 5445 2.232756 TCTGACAGCAAGCGTTTGTA 57.767 45.000 13.73 0.00 36.65 2.41
2886 5454 0.175760 GGCTCGGTATCTGACAGCAA 59.824 55.000 0.00 0.00 0.00 3.91
2889 5457 1.204704 TGTTGGCTCGGTATCTGACAG 59.795 52.381 0.00 0.00 0.00 3.51
2890 5458 1.204704 CTGTTGGCTCGGTATCTGACA 59.795 52.381 0.00 0.00 0.00 3.58
2891 5459 1.476891 TCTGTTGGCTCGGTATCTGAC 59.523 52.381 0.00 0.00 0.00 3.51
2892 5460 1.847328 TCTGTTGGCTCGGTATCTGA 58.153 50.000 0.00 0.00 0.00 3.27
2893 5461 2.672961 TTCTGTTGGCTCGGTATCTG 57.327 50.000 0.00 0.00 0.00 2.90
2894 5462 2.301870 TGTTTCTGTTGGCTCGGTATCT 59.698 45.455 0.00 0.00 0.00 1.98
2897 5465 2.851263 ATGTTTCTGTTGGCTCGGTA 57.149 45.000 0.00 0.00 0.00 4.02
2898 5466 2.423577 GTATGTTTCTGTTGGCTCGGT 58.576 47.619 0.00 0.00 0.00 4.69
2899 5467 1.393539 CGTATGTTTCTGTTGGCTCGG 59.606 52.381 0.00 0.00 0.00 4.63
2901 5469 1.130561 GCCGTATGTTTCTGTTGGCTC 59.869 52.381 0.00 0.00 38.00 4.70
2902 5470 1.165270 GCCGTATGTTTCTGTTGGCT 58.835 50.000 0.00 0.00 38.00 4.75
2903 5471 0.170339 GGCCGTATGTTTCTGTTGGC 59.830 55.000 0.00 0.00 40.25 4.52
2904 5472 0.808755 GGGCCGTATGTTTCTGTTGG 59.191 55.000 0.00 0.00 0.00 3.77
2905 5473 0.808755 GGGGCCGTATGTTTCTGTTG 59.191 55.000 0.00 0.00 0.00 3.33
2907 5475 0.402504 TTGGGGCCGTATGTTTCTGT 59.597 50.000 0.00 0.00 0.00 3.41
2910 5478 0.528924 GGTTTGGGGCCGTATGTTTC 59.471 55.000 0.00 0.00 0.00 2.78
2911 5479 0.178958 TGGTTTGGGGCCGTATGTTT 60.179 50.000 0.00 0.00 0.00 2.83
2920 5513 2.231235 CTGTTCTTGTATGGTTTGGGGC 59.769 50.000 0.00 0.00 0.00 5.80
2924 5517 6.464222 TCCTACTCTGTTCTTGTATGGTTTG 58.536 40.000 0.00 0.00 0.00 2.93
2925 5518 6.681729 TCCTACTCTGTTCTTGTATGGTTT 57.318 37.500 0.00 0.00 0.00 3.27
2933 5526 4.039245 TCCTGTGTTCCTACTCTGTTCTTG 59.961 45.833 0.00 0.00 0.00 3.02
2947 5540 0.798776 CGGCAGTGATTCCTGTGTTC 59.201 55.000 0.00 0.00 34.84 3.18
2948 5541 0.396435 TCGGCAGTGATTCCTGTGTT 59.604 50.000 0.00 0.00 34.84 3.32
2963 5556 1.153628 AGTTGTCGCCTATGTCGGC 60.154 57.895 0.00 0.00 46.68 5.54
2964 5557 0.172578 TCAGTTGTCGCCTATGTCGG 59.827 55.000 0.00 0.00 0.00 4.79
2965 5558 1.269166 GTCAGTTGTCGCCTATGTCG 58.731 55.000 0.00 0.00 0.00 4.35
2966 5559 2.363788 TGTCAGTTGTCGCCTATGTC 57.636 50.000 0.00 0.00 0.00 3.06
2967 5560 2.233676 TCATGTCAGTTGTCGCCTATGT 59.766 45.455 0.00 0.00 0.00 2.29
2968 5561 2.892374 TCATGTCAGTTGTCGCCTATG 58.108 47.619 0.00 0.00 0.00 2.23
2969 5562 3.525537 CTTCATGTCAGTTGTCGCCTAT 58.474 45.455 0.00 0.00 0.00 2.57
2970 5563 2.930887 GCTTCATGTCAGTTGTCGCCTA 60.931 50.000 0.00 0.00 0.00 3.93
2971 5564 1.800805 CTTCATGTCAGTTGTCGCCT 58.199 50.000 0.00 0.00 0.00 5.52
2972 5565 0.166814 GCTTCATGTCAGTTGTCGCC 59.833 55.000 0.00 0.00 0.00 5.54
2973 5566 0.867746 TGCTTCATGTCAGTTGTCGC 59.132 50.000 0.00 0.00 0.00 5.19
2974 5567 2.349817 GGTTGCTTCATGTCAGTTGTCG 60.350 50.000 0.00 0.00 0.00 4.35
2975 5568 2.618241 TGGTTGCTTCATGTCAGTTGTC 59.382 45.455 0.00 0.00 0.00 3.18
2976 5569 2.358898 GTGGTTGCTTCATGTCAGTTGT 59.641 45.455 0.00 0.00 0.00 3.32
2977 5570 2.358582 TGTGGTTGCTTCATGTCAGTTG 59.641 45.455 0.00 0.00 0.00 3.16
2978 5571 2.358898 GTGTGGTTGCTTCATGTCAGTT 59.641 45.455 0.00 0.00 0.00 3.16
2979 5572 1.949525 GTGTGGTTGCTTCATGTCAGT 59.050 47.619 0.00 0.00 0.00 3.41
2980 5573 1.948834 TGTGTGGTTGCTTCATGTCAG 59.051 47.619 0.00 0.00 0.00 3.51
2981 5574 2.049888 TGTGTGGTTGCTTCATGTCA 57.950 45.000 0.00 0.00 0.00 3.58
2982 5575 2.618241 TCTTGTGTGGTTGCTTCATGTC 59.382 45.455 0.00 0.00 0.00 3.06
2983 5576 2.358898 GTCTTGTGTGGTTGCTTCATGT 59.641 45.455 0.00 0.00 0.00 3.21
2984 5577 2.358582 TGTCTTGTGTGGTTGCTTCATG 59.641 45.455 0.00 0.00 0.00 3.07
2985 5578 2.620115 CTGTCTTGTGTGGTTGCTTCAT 59.380 45.455 0.00 0.00 0.00 2.57
2986 5579 2.016318 CTGTCTTGTGTGGTTGCTTCA 58.984 47.619 0.00 0.00 0.00 3.02
2987 5580 2.017049 ACTGTCTTGTGTGGTTGCTTC 58.983 47.619 0.00 0.00 0.00 3.86
2988 5581 2.128771 ACTGTCTTGTGTGGTTGCTT 57.871 45.000 0.00 0.00 0.00 3.91
2989 5582 2.943033 GTTACTGTCTTGTGTGGTTGCT 59.057 45.455 0.00 0.00 0.00 3.91
2990 5583 2.943033 AGTTACTGTCTTGTGTGGTTGC 59.057 45.455 0.00 0.00 0.00 4.17
2991 5584 4.188462 TCAGTTACTGTCTTGTGTGGTTG 58.812 43.478 12.41 0.00 32.61 3.77
3053 5646 6.325286 TGAAACTGGGCCTAACATTTAAGTTT 59.675 34.615 4.53 8.82 38.83 2.66
3054 5647 5.836358 TGAAACTGGGCCTAACATTTAAGTT 59.164 36.000 4.53 0.00 35.55 2.66
3056 5649 5.975693 TGAAACTGGGCCTAACATTTAAG 57.024 39.130 4.53 0.00 0.00 1.85
3057 5650 5.598830 TGTTGAAACTGGGCCTAACATTTAA 59.401 36.000 4.53 0.00 0.00 1.52
3217 5812 6.609237 TCATAGAAAAATCCATCTTGCTCG 57.391 37.500 0.00 0.00 0.00 5.03
3328 5923 2.957474 AGTTTGCCTGTTTGGTATGGT 58.043 42.857 0.00 0.00 38.35 3.55
3342 5937 4.595116 CTGCTAAGCATGTGATAGTTTGC 58.405 43.478 0.00 0.00 38.13 3.68
3364 5959 1.407979 CCAAGATCATGGCTTGAAGGC 59.592 52.381 22.64 12.27 44.16 4.35
3383 5978 1.207329 AGTCTTTACATGAGGTCGGCC 59.793 52.381 0.00 0.00 0.00 6.13
3437 6032 1.745141 GCCATCTTCCCTGCTACACTG 60.745 57.143 0.00 0.00 0.00 3.66



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.