Multiple sequence alignment - TraesCS2A01G310800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G310800 chr2A 100.000 3154 0 0 1 3154 534606232 534603079 0.000000e+00 5825.0
1 TraesCS2A01G310800 chr2A 91.678 1466 92 9 770 2214 514663698 514665154 0.000000e+00 2004.0
2 TraesCS2A01G310800 chr2A 94.245 1199 41 4 1964 3154 196079686 196078508 0.000000e+00 1807.0
3 TraesCS2A01G310800 chr2A 91.034 803 65 3 847 1643 196080501 196079700 0.000000e+00 1077.0
4 TraesCS2A01G310800 chr2A 93.987 316 17 2 1 314 510878514 510878829 7.910000e-131 477.0
5 TraesCS2A01G310800 chr2A 95.865 266 10 1 515 780 280100827 280101091 2.250000e-116 429.0
6 TraesCS2A01G310800 chr2A 96.183 262 10 0 515 776 722826981 722827242 2.250000e-116 429.0
7 TraesCS2A01G310800 chr2A 95.802 262 11 0 515 776 653300229 653300490 1.050000e-114 424.0
8 TraesCS2A01G310800 chr2A 94.146 205 12 0 313 517 196081574 196081370 2.360000e-81 313.0
9 TraesCS2A01G310800 chr2A 91.304 207 18 0 311 517 514663499 514663705 1.850000e-72 283.0
10 TraesCS2A01G310800 chr2D 93.875 2400 109 7 787 3154 651123791 651121398 0.000000e+00 3583.0
11 TraesCS2A01G310800 chr2D 93.187 2407 121 9 774 3154 430734079 430736468 0.000000e+00 3496.0
12 TraesCS2A01G310800 chr2B 86.165 1901 183 17 874 2710 126755412 126757296 0.000000e+00 1980.0
13 TraesCS2A01G310800 chr2B 93.592 515 25 1 2648 3154 13436461 13435947 0.000000e+00 761.0
14 TraesCS2A01G310800 chr4A 94.495 1199 42 4 1964 3154 586020254 586019072 0.000000e+00 1827.0
15 TraesCS2A01G310800 chr4A 91.283 803 63 3 847 1643 586021069 586020268 0.000000e+00 1088.0
16 TraesCS2A01G310800 chr4A 93.691 317 16 4 1 314 362756113 362755798 3.680000e-129 472.0
17 TraesCS2A01G310800 chr4A 93.659 205 13 0 313 517 586022142 586021938 1.100000e-79 307.0
18 TraesCS2A01G310800 chr5D 90.311 1414 88 9 826 2214 79741348 79742737 0.000000e+00 1807.0
19 TraesCS2A01G310800 chr5D 93.743 943 33 7 2220 3154 79743426 79744350 0.000000e+00 1391.0
20 TraesCS2A01G310800 chr5D 96.154 78 3 0 774 851 341203321 341203398 9.180000e-26 128.0
21 TraesCS2A01G310800 chr4D 88.639 1470 117 12 875 2296 451880332 451881799 0.000000e+00 1744.0
22 TraesCS2A01G310800 chr1D 89.254 1368 122 8 875 2218 381612983 381614349 0.000000e+00 1688.0
23 TraesCS2A01G310800 chr1D 91.667 204 16 1 314 517 299566292 299566494 6.660000e-72 281.0
24 TraesCS2A01G310800 chr1D 94.872 78 4 0 774 851 299566492 299566569 4.270000e-24 122.0
25 TraesCS2A01G310800 chr7A 90.916 1266 91 7 965 2214 688771595 688770338 0.000000e+00 1679.0
26 TraesCS2A01G310800 chr7A 92.679 1161 58 7 1999 3154 581690258 581689120 0.000000e+00 1648.0
27 TraesCS2A01G310800 chr7A 91.707 205 17 0 313 517 595409011 595408807 5.150000e-73 285.0
28 TraesCS2A01G310800 chr5A 92.869 1164 45 6 1999 3154 560416831 560417964 0.000000e+00 1655.0
29 TraesCS2A01G310800 chr5A 93.919 444 17 3 2719 3154 503684954 503684513 0.000000e+00 662.0
30 TraesCS2A01G310800 chr5A 93.987 316 15 4 1 314 273435915 273435602 2.850000e-130 475.0
31 TraesCS2A01G310800 chr5A 93.671 316 18 2 1 314 193837167 193837482 3.680000e-129 472.0
32 TraesCS2A01G310800 chr5A 95.880 267 10 1 511 776 347015715 347015981 6.250000e-117 431.0
33 TraesCS2A01G310800 chr5A 81.818 110 19 1 683 792 473025978 473025870 1.200000e-14 91.6
34 TraesCS2A01G310800 chr6A 89.643 1120 88 13 773 1883 257020559 257019459 0.000000e+00 1400.0
35 TraesCS2A01G310800 chr6A 94.620 316 15 2 1 314 294451179 294450864 3.660000e-134 488.0
36 TraesCS2A01G310800 chr6A 94.620 316 14 3 1 314 555168557 555168243 1.320000e-133 486.0
37 TraesCS2A01G310800 chr6A 99.618 262 1 0 515 776 456766226 456765965 2.200000e-131 479.0
38 TraesCS2A01G310800 chr6A 93.243 74 5 0 1023 1096 517223467 517223394 3.330000e-20 110.0
39 TraesCS2A01G310800 chr6A 80.000 130 25 1 1114 1243 17538550 17538422 9.310000e-16 95.3
40 TraesCS2A01G310800 chr7B 93.325 809 29 6 2355 3154 611347000 611346208 0.000000e+00 1171.0
41 TraesCS2A01G310800 chr7B 89.873 237 23 1 1047 1282 611347705 611347469 1.420000e-78 303.0
42 TraesCS2A01G310800 chr6B 93.317 793 33 4 1554 2331 665317127 665317914 0.000000e+00 1153.0
43 TraesCS2A01G310800 chr6B 90.083 726 69 3 770 1493 665316403 665317127 0.000000e+00 939.0
44 TraesCS2A01G310800 chr3B 89.688 737 43 10 2001 2710 759354062 759354792 0.000000e+00 909.0
45 TraesCS2A01G310800 chr3B 87.158 732 73 5 1230 1940 759353302 759354033 0.000000e+00 811.0
46 TraesCS2A01G310800 chr3B 91.220 205 18 0 313 517 275009663 275009459 2.400000e-71 279.0
47 TraesCS2A01G310800 chrUn 92.949 624 29 4 2342 2956 37758213 37757596 0.000000e+00 894.0
48 TraesCS2A01G310800 chrUn 93.822 437 23 1 2722 3154 49575258 49574822 0.000000e+00 654.0
49 TraesCS2A01G310800 chrUn 89.421 397 27 5 1835 2221 37758604 37758213 1.320000e-133 486.0
50 TraesCS2A01G310800 chrUn 89.594 394 26 5 1835 2218 322369453 322369841 1.320000e-133 486.0
51 TraesCS2A01G310800 chr1A 87.858 593 41 11 1764 2338 168047996 168047417 0.000000e+00 667.0
52 TraesCS2A01G310800 chr1A 97.287 258 7 0 519 776 126513067 126513324 3.730000e-119 438.0
53 TraesCS2A01G310800 chr1A 95.817 263 11 0 513 775 419479876 419479614 2.910000e-115 425.0
54 TraesCS2A01G310800 chr1B 93.498 446 19 2 2719 3154 292349429 292349874 0.000000e+00 654.0
55 TraesCS2A01G310800 chr3A 94.025 318 13 6 1 314 461873687 461873372 7.910000e-131 477.0
56 TraesCS2A01G310800 chr3A 94.006 317 15 4 1 314 601842750 601842435 7.910000e-131 477.0
57 TraesCS2A01G310800 chr3A 94.853 272 14 0 514 785 198424651 198424380 2.910000e-115 425.0
58 TraesCS2A01G310800 chr7D 93.691 317 16 4 1 314 571183263 571182948 3.680000e-129 472.0
59 TraesCS2A01G310800 chr4B 96.183 262 10 0 515 776 645070032 645070293 2.250000e-116 429.0
60 TraesCS2A01G310800 chr4B 91.220 205 16 2 314 517 654696408 654696205 8.620000e-71 278.0
61 TraesCS2A01G310800 chr4B 91.220 205 16 2 314 517 654803326 654803123 8.620000e-71 278.0
62 TraesCS2A01G310800 chr3D 90.686 204 19 0 314 517 41134796 41134999 4.010000e-69 272.0
63 TraesCS2A01G310800 chr3D 97.436 78 2 0 774 851 41134997 41135074 1.970000e-27 134.0
64 TraesCS2A01G310800 chr3D 94.872 78 4 0 774 851 438300991 438301068 4.270000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G310800 chr2A 534603079 534606232 3153 True 5825.000000 5825 100.000000 1 3154 1 chr2A.!!$R1 3153
1 TraesCS2A01G310800 chr2A 514663499 514665154 1655 False 1143.500000 2004 91.491000 311 2214 2 chr2A.!!$F5 1903
2 TraesCS2A01G310800 chr2A 196078508 196081574 3066 True 1065.666667 1807 93.141667 313 3154 3 chr2A.!!$R2 2841
3 TraesCS2A01G310800 chr2D 651121398 651123791 2393 True 3583.000000 3583 93.875000 787 3154 1 chr2D.!!$R1 2367
4 TraesCS2A01G310800 chr2D 430734079 430736468 2389 False 3496.000000 3496 93.187000 774 3154 1 chr2D.!!$F1 2380
5 TraesCS2A01G310800 chr2B 126755412 126757296 1884 False 1980.000000 1980 86.165000 874 2710 1 chr2B.!!$F1 1836
6 TraesCS2A01G310800 chr2B 13435947 13436461 514 True 761.000000 761 93.592000 2648 3154 1 chr2B.!!$R1 506
7 TraesCS2A01G310800 chr4A 586019072 586022142 3070 True 1074.000000 1827 93.145667 313 3154 3 chr4A.!!$R2 2841
8 TraesCS2A01G310800 chr5D 79741348 79744350 3002 False 1599.000000 1807 92.027000 826 3154 2 chr5D.!!$F2 2328
9 TraesCS2A01G310800 chr4D 451880332 451881799 1467 False 1744.000000 1744 88.639000 875 2296 1 chr4D.!!$F1 1421
10 TraesCS2A01G310800 chr1D 381612983 381614349 1366 False 1688.000000 1688 89.254000 875 2218 1 chr1D.!!$F1 1343
11 TraesCS2A01G310800 chr7A 688770338 688771595 1257 True 1679.000000 1679 90.916000 965 2214 1 chr7A.!!$R3 1249
12 TraesCS2A01G310800 chr7A 581689120 581690258 1138 True 1648.000000 1648 92.679000 1999 3154 1 chr7A.!!$R1 1155
13 TraesCS2A01G310800 chr5A 560416831 560417964 1133 False 1655.000000 1655 92.869000 1999 3154 1 chr5A.!!$F3 1155
14 TraesCS2A01G310800 chr6A 257019459 257020559 1100 True 1400.000000 1400 89.643000 773 1883 1 chr6A.!!$R2 1110
15 TraesCS2A01G310800 chr7B 611346208 611347705 1497 True 737.000000 1171 91.599000 1047 3154 2 chr7B.!!$R1 2107
16 TraesCS2A01G310800 chr6B 665316403 665317914 1511 False 1046.000000 1153 91.700000 770 2331 2 chr6B.!!$F1 1561
17 TraesCS2A01G310800 chr3B 759353302 759354792 1490 False 860.000000 909 88.423000 1230 2710 2 chr3B.!!$F1 1480
18 TraesCS2A01G310800 chrUn 37757596 37758604 1008 True 690.000000 894 91.185000 1835 2956 2 chrUn.!!$R2 1121
19 TraesCS2A01G310800 chr1A 168047417 168047996 579 True 667.000000 667 87.858000 1764 2338 1 chr1A.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.035820 GTGGTGGTTCCCAAGCGATA 60.036 55.0 0.00 0.00 35.92 2.92 F
232 233 0.036294 GGGCATCCCTATTACCGCTC 60.036 60.0 0.00 0.00 41.34 5.03 F
521 522 0.108472 GTAGTGCGGGTTGTACTCCC 60.108 60.0 14.09 14.09 43.03 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1396 2241 0.531532 CGCACTTGGCATAGCTAGCT 60.532 55.0 23.12 23.12 45.17 3.32 R
1846 2715 0.661552 CTGGGAAGCTGAATCGCATG 59.338 55.0 4.32 0.00 38.79 4.06 R
2486 4433 2.899303 TTGGAAGGAAATGGGGAGTC 57.101 50.0 0.00 0.00 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.568152 GTGCCAGAGCTCAAGTTTTAAA 57.432 40.909 17.77 0.00 40.80 1.52
22 23 4.932146 GTGCCAGAGCTCAAGTTTTAAAA 58.068 39.130 17.77 0.00 40.80 1.52
23 24 4.740205 GTGCCAGAGCTCAAGTTTTAAAAC 59.260 41.667 21.06 21.06 40.80 2.43
24 25 4.400884 TGCCAGAGCTCAAGTTTTAAAACA 59.599 37.500 28.03 10.79 39.61 2.83
25 26 4.978580 GCCAGAGCTCAAGTTTTAAAACAG 59.021 41.667 28.03 20.66 37.42 3.16
26 27 5.221048 GCCAGAGCTCAAGTTTTAAAACAGA 60.221 40.000 28.03 23.01 37.42 3.41
27 28 6.433766 CCAGAGCTCAAGTTTTAAAACAGAG 58.566 40.000 29.94 29.94 41.82 3.35
28 29 6.260936 CCAGAGCTCAAGTTTTAAAACAGAGA 59.739 38.462 34.12 25.27 41.63 3.10
29 30 7.040823 CCAGAGCTCAAGTTTTAAAACAGAGAT 60.041 37.037 34.12 31.52 41.63 2.75
30 31 8.993121 CAGAGCTCAAGTTTTAAAACAGAGATA 58.007 33.333 34.12 16.69 41.63 1.98
31 32 9.561069 AGAGCTCAAGTTTTAAAACAGAGATAA 57.439 29.630 34.12 15.96 41.63 1.75
54 55 9.754382 ATAAATGATTATTTTGAGACATGCACC 57.246 29.630 0.26 0.00 37.64 5.01
55 56 5.581126 TGATTATTTTGAGACATGCACCC 57.419 39.130 0.00 0.00 0.00 4.61
56 57 5.263599 TGATTATTTTGAGACATGCACCCT 58.736 37.500 0.00 0.00 0.00 4.34
57 58 5.716228 TGATTATTTTGAGACATGCACCCTT 59.284 36.000 0.00 0.00 0.00 3.95
58 59 5.643379 TTATTTTGAGACATGCACCCTTC 57.357 39.130 0.00 0.00 0.00 3.46
59 60 2.957402 TTTGAGACATGCACCCTTCT 57.043 45.000 0.00 0.00 0.00 2.85
60 61 2.479566 TTGAGACATGCACCCTTCTC 57.520 50.000 0.00 0.00 35.93 2.87
61 62 1.351076 TGAGACATGCACCCTTCTCA 58.649 50.000 12.17 12.17 41.71 3.27
62 63 1.911357 TGAGACATGCACCCTTCTCAT 59.089 47.619 12.17 0.00 39.62 2.90
63 64 2.306805 TGAGACATGCACCCTTCTCATT 59.693 45.455 12.17 0.00 39.62 2.57
64 65 3.245016 TGAGACATGCACCCTTCTCATTT 60.245 43.478 12.17 0.00 39.62 2.32
65 66 4.019411 TGAGACATGCACCCTTCTCATTTA 60.019 41.667 12.17 0.00 39.62 1.40
66 67 4.265073 AGACATGCACCCTTCTCATTTAC 58.735 43.478 0.00 0.00 0.00 2.01
67 68 4.018960 AGACATGCACCCTTCTCATTTACT 60.019 41.667 0.00 0.00 0.00 2.24
68 69 4.666512 ACATGCACCCTTCTCATTTACTT 58.333 39.130 0.00 0.00 0.00 2.24
69 70 4.702131 ACATGCACCCTTCTCATTTACTTC 59.298 41.667 0.00 0.00 0.00 3.01
70 71 4.365514 TGCACCCTTCTCATTTACTTCA 57.634 40.909 0.00 0.00 0.00 3.02
71 72 4.072131 TGCACCCTTCTCATTTACTTCAC 58.928 43.478 0.00 0.00 0.00 3.18
72 73 3.125316 GCACCCTTCTCATTTACTTCACG 59.875 47.826 0.00 0.00 0.00 4.35
73 74 4.566004 CACCCTTCTCATTTACTTCACGA 58.434 43.478 0.00 0.00 0.00 4.35
74 75 4.389077 CACCCTTCTCATTTACTTCACGAC 59.611 45.833 0.00 0.00 0.00 4.34
75 76 4.283722 ACCCTTCTCATTTACTTCACGACT 59.716 41.667 0.00 0.00 0.00 4.18
76 77 5.479375 ACCCTTCTCATTTACTTCACGACTA 59.521 40.000 0.00 0.00 0.00 2.59
77 78 6.154706 ACCCTTCTCATTTACTTCACGACTAT 59.845 38.462 0.00 0.00 0.00 2.12
78 79 6.697892 CCCTTCTCATTTACTTCACGACTATC 59.302 42.308 0.00 0.00 0.00 2.08
79 80 7.258441 CCTTCTCATTTACTTCACGACTATCA 58.742 38.462 0.00 0.00 0.00 2.15
80 81 7.433719 CCTTCTCATTTACTTCACGACTATCAG 59.566 40.741 0.00 0.00 0.00 2.90
81 82 7.392494 TCTCATTTACTTCACGACTATCAGT 57.608 36.000 0.00 0.00 0.00 3.41
82 83 7.827701 TCTCATTTACTTCACGACTATCAGTT 58.172 34.615 0.00 0.00 0.00 3.16
83 84 8.953313 TCTCATTTACTTCACGACTATCAGTTA 58.047 33.333 0.00 0.00 0.00 2.24
84 85 9.737427 CTCATTTACTTCACGACTATCAGTTAT 57.263 33.333 0.00 0.00 0.00 1.89
85 86 9.731819 TCATTTACTTCACGACTATCAGTTATC 57.268 33.333 0.00 0.00 0.00 1.75
86 87 9.516314 CATTTACTTCACGACTATCAGTTATCA 57.484 33.333 0.00 0.00 0.00 2.15
91 92 9.900710 ACTTCACGACTATCAGTTATCAATATC 57.099 33.333 0.00 0.00 0.00 1.63
94 95 8.731605 TCACGACTATCAGTTATCAATATCTCC 58.268 37.037 0.00 0.00 0.00 3.71
95 96 7.971168 CACGACTATCAGTTATCAATATCTCCC 59.029 40.741 0.00 0.00 0.00 4.30
96 97 7.670140 ACGACTATCAGTTATCAATATCTCCCA 59.330 37.037 0.00 0.00 0.00 4.37
97 98 8.690884 CGACTATCAGTTATCAATATCTCCCAT 58.309 37.037 0.00 0.00 0.00 4.00
98 99 9.814899 GACTATCAGTTATCAATATCTCCCATG 57.185 37.037 0.00 0.00 0.00 3.66
99 100 8.263640 ACTATCAGTTATCAATATCTCCCATGC 58.736 37.037 0.00 0.00 0.00 4.06
100 101 6.692849 TCAGTTATCAATATCTCCCATGCT 57.307 37.500 0.00 0.00 0.00 3.79
101 102 7.797121 TCAGTTATCAATATCTCCCATGCTA 57.203 36.000 0.00 0.00 0.00 3.49
102 103 8.206126 TCAGTTATCAATATCTCCCATGCTAA 57.794 34.615 0.00 0.00 0.00 3.09
103 104 8.659527 TCAGTTATCAATATCTCCCATGCTAAA 58.340 33.333 0.00 0.00 0.00 1.85
104 105 8.725148 CAGTTATCAATATCTCCCATGCTAAAC 58.275 37.037 0.00 0.00 0.00 2.01
105 106 8.439971 AGTTATCAATATCTCCCATGCTAAACA 58.560 33.333 0.00 0.00 0.00 2.83
106 107 8.725148 GTTATCAATATCTCCCATGCTAAACAG 58.275 37.037 0.00 0.00 0.00 3.16
107 108 5.624159 TCAATATCTCCCATGCTAAACAGG 58.376 41.667 0.00 0.00 0.00 4.00
108 109 2.355010 ATCTCCCATGCTAAACAGGC 57.645 50.000 0.00 0.00 0.00 4.85
109 110 1.289160 TCTCCCATGCTAAACAGGCT 58.711 50.000 0.00 0.00 0.00 4.58
110 111 2.477245 TCTCCCATGCTAAACAGGCTA 58.523 47.619 0.00 0.00 0.00 3.93
111 112 2.435805 TCTCCCATGCTAAACAGGCTAG 59.564 50.000 0.00 0.00 0.00 3.42
112 113 2.171448 CTCCCATGCTAAACAGGCTAGT 59.829 50.000 0.00 0.00 0.00 2.57
113 114 2.092968 TCCCATGCTAAACAGGCTAGTG 60.093 50.000 0.00 0.00 0.00 2.74
114 115 2.292267 CCATGCTAAACAGGCTAGTGG 58.708 52.381 0.00 0.00 0.00 4.00
115 116 2.356125 CCATGCTAAACAGGCTAGTGGT 60.356 50.000 0.00 0.00 0.00 4.16
116 117 2.472695 TGCTAAACAGGCTAGTGGTG 57.527 50.000 0.00 0.00 0.00 4.17
117 118 1.003118 TGCTAAACAGGCTAGTGGTGG 59.997 52.381 0.00 0.00 0.00 4.61
118 119 1.003233 GCTAAACAGGCTAGTGGTGGT 59.997 52.381 0.00 0.00 0.00 4.16
119 120 2.552373 GCTAAACAGGCTAGTGGTGGTT 60.552 50.000 0.00 0.00 0.00 3.67
120 121 2.271944 AAACAGGCTAGTGGTGGTTC 57.728 50.000 0.00 0.00 0.00 3.62
121 122 0.400594 AACAGGCTAGTGGTGGTTCC 59.599 55.000 0.00 0.00 0.00 3.62
122 123 1.299976 CAGGCTAGTGGTGGTTCCC 59.700 63.158 0.00 0.00 34.77 3.97
123 124 1.151899 AGGCTAGTGGTGGTTCCCA 60.152 57.895 0.00 0.00 34.77 4.37
124 125 0.770557 AGGCTAGTGGTGGTTCCCAA 60.771 55.000 0.00 0.00 35.92 4.12
125 126 0.322546 GGCTAGTGGTGGTTCCCAAG 60.323 60.000 0.00 0.00 35.92 3.61
126 127 0.960861 GCTAGTGGTGGTTCCCAAGC 60.961 60.000 0.00 0.00 35.92 4.01
127 128 0.673644 CTAGTGGTGGTTCCCAAGCG 60.674 60.000 0.00 0.00 35.92 4.68
128 129 1.122632 TAGTGGTGGTTCCCAAGCGA 61.123 55.000 0.00 0.00 35.92 4.93
129 130 1.303317 GTGGTGGTTCCCAAGCGAT 60.303 57.895 0.00 0.00 35.92 4.58
130 131 0.035820 GTGGTGGTTCCCAAGCGATA 60.036 55.000 0.00 0.00 35.92 2.92
131 132 0.693622 TGGTGGTTCCCAAGCGATAA 59.306 50.000 0.00 0.00 34.18 1.75
132 133 1.074084 TGGTGGTTCCCAAGCGATAAA 59.926 47.619 0.00 0.00 34.18 1.40
133 134 2.164338 GGTGGTTCCCAAGCGATAAAA 58.836 47.619 0.00 0.00 34.18 1.52
134 135 2.163613 GGTGGTTCCCAAGCGATAAAAG 59.836 50.000 0.00 0.00 34.18 2.27
135 136 2.817844 GTGGTTCCCAAGCGATAAAAGT 59.182 45.455 0.00 0.00 34.18 2.66
136 137 4.004982 GTGGTTCCCAAGCGATAAAAGTA 58.995 43.478 0.00 0.00 34.18 2.24
137 138 4.456566 GTGGTTCCCAAGCGATAAAAGTAA 59.543 41.667 0.00 0.00 34.18 2.24
138 139 5.048573 GTGGTTCCCAAGCGATAAAAGTAAA 60.049 40.000 0.00 0.00 34.18 2.01
139 140 5.182380 TGGTTCCCAAGCGATAAAAGTAAAG 59.818 40.000 0.00 0.00 0.00 1.85
140 141 5.392703 GGTTCCCAAGCGATAAAAGTAAAGG 60.393 44.000 0.00 0.00 0.00 3.11
141 142 4.913784 TCCCAAGCGATAAAAGTAAAGGT 58.086 39.130 0.00 0.00 0.00 3.50
142 143 5.318630 TCCCAAGCGATAAAAGTAAAGGTT 58.681 37.500 0.00 0.00 0.00 3.50
143 144 5.771165 TCCCAAGCGATAAAAGTAAAGGTTT 59.229 36.000 0.00 0.00 0.00 3.27
144 145 5.861787 CCCAAGCGATAAAAGTAAAGGTTTG 59.138 40.000 0.00 0.00 0.00 2.93
145 146 6.294286 CCCAAGCGATAAAAGTAAAGGTTTGA 60.294 38.462 0.00 0.00 0.00 2.69
146 147 6.581166 CCAAGCGATAAAAGTAAAGGTTTGAC 59.419 38.462 0.00 0.00 0.00 3.18
147 148 7.360361 CAAGCGATAAAAGTAAAGGTTTGACT 58.640 34.615 0.00 0.00 0.00 3.41
148 149 7.506328 AGCGATAAAAGTAAAGGTTTGACTT 57.494 32.000 0.00 0.00 34.92 3.01
149 150 7.582352 AGCGATAAAAGTAAAGGTTTGACTTC 58.418 34.615 0.00 0.00 32.27 3.01
150 151 7.227910 AGCGATAAAAGTAAAGGTTTGACTTCA 59.772 33.333 0.00 0.00 32.27 3.02
151 152 8.021396 GCGATAAAAGTAAAGGTTTGACTTCAT 58.979 33.333 0.00 0.00 32.27 2.57
152 153 9.893305 CGATAAAAGTAAAGGTTTGACTTCATT 57.107 29.630 0.00 0.00 32.27 2.57
156 157 8.990163 AAAGTAAAGGTTTGACTTCATTAGGA 57.010 30.769 0.00 0.00 32.27 2.94
157 158 8.622948 AAGTAAAGGTTTGACTTCATTAGGAG 57.377 34.615 0.00 0.00 0.00 3.69
158 159 7.746703 AGTAAAGGTTTGACTTCATTAGGAGT 58.253 34.615 0.00 0.00 0.00 3.85
159 160 8.218488 AGTAAAGGTTTGACTTCATTAGGAGTT 58.782 33.333 0.00 0.00 0.00 3.01
160 161 7.898014 AAAGGTTTGACTTCATTAGGAGTTT 57.102 32.000 0.00 0.00 0.00 2.66
161 162 7.898014 AAGGTTTGACTTCATTAGGAGTTTT 57.102 32.000 0.00 0.00 0.00 2.43
162 163 7.898014 AGGTTTGACTTCATTAGGAGTTTTT 57.102 32.000 0.00 0.00 0.00 1.94
163 164 7.716612 AGGTTTGACTTCATTAGGAGTTTTTG 58.283 34.615 0.00 0.00 0.00 2.44
164 165 7.342026 AGGTTTGACTTCATTAGGAGTTTTTGT 59.658 33.333 0.00 0.00 0.00 2.83
165 166 7.979537 GGTTTGACTTCATTAGGAGTTTTTGTT 59.020 33.333 0.00 0.00 0.00 2.83
166 167 9.366216 GTTTGACTTCATTAGGAGTTTTTGTTT 57.634 29.630 0.00 0.00 0.00 2.83
167 168 8.925161 TTGACTTCATTAGGAGTTTTTGTTTG 57.075 30.769 0.00 0.00 0.00 2.93
168 169 8.287439 TGACTTCATTAGGAGTTTTTGTTTGA 57.713 30.769 0.00 0.00 0.00 2.69
169 170 8.912988 TGACTTCATTAGGAGTTTTTGTTTGAT 58.087 29.630 0.00 0.00 0.00 2.57
170 171 9.750125 GACTTCATTAGGAGTTTTTGTTTGATT 57.250 29.630 0.00 0.00 0.00 2.57
178 179 7.084486 AGGAGTTTTTGTTTGATTATTCGAGC 58.916 34.615 0.00 0.00 0.00 5.03
179 180 6.861055 GGAGTTTTTGTTTGATTATTCGAGCA 59.139 34.615 0.00 0.00 0.00 4.26
180 181 7.381139 GGAGTTTTTGTTTGATTATTCGAGCAA 59.619 33.333 1.30 1.30 35.41 3.91
181 182 8.816640 AGTTTTTGTTTGATTATTCGAGCAAT 57.183 26.923 5.34 0.00 36.64 3.56
182 183 9.260002 AGTTTTTGTTTGATTATTCGAGCAATT 57.740 25.926 5.34 0.00 36.64 2.32
186 187 9.906660 TTTGTTTGATTATTCGAGCAATTAACT 57.093 25.926 5.34 0.00 36.64 2.24
187 188 9.554724 TTGTTTGATTATTCGAGCAATTAACTC 57.445 29.630 14.15 0.00 33.12 3.01
188 189 8.946085 TGTTTGATTATTCGAGCAATTAACTCT 58.054 29.630 6.21 0.00 31.71 3.24
189 190 9.774742 GTTTGATTATTCGAGCAATTAACTCTT 57.225 29.630 6.21 0.00 31.71 2.85
198 199 9.959749 TTCGAGCAATTAACTCTTTTTGTATTT 57.040 25.926 6.21 0.00 31.71 1.40
199 200 9.959749 TCGAGCAATTAACTCTTTTTGTATTTT 57.040 25.926 6.21 0.00 31.71 1.82
200 201 9.993881 CGAGCAATTAACTCTTTTTGTATTTTG 57.006 29.630 6.21 0.00 31.71 2.44
201 202 9.797473 GAGCAATTAACTCTTTTTGTATTTTGC 57.203 29.630 0.00 0.00 35.91 3.68
202 203 9.323985 AGCAATTAACTCTTTTTGTATTTTGCA 57.676 25.926 0.00 0.00 37.59 4.08
203 204 9.584839 GCAATTAACTCTTTTTGTATTTTGCAG 57.415 29.630 0.00 0.00 35.78 4.41
208 209 7.538303 ACTCTTTTTGTATTTTGCAGTTTGG 57.462 32.000 0.00 0.00 0.00 3.28
209 210 6.538381 ACTCTTTTTGTATTTTGCAGTTTGGG 59.462 34.615 0.00 0.00 0.00 4.12
210 211 6.644347 TCTTTTTGTATTTTGCAGTTTGGGA 58.356 32.000 0.00 0.00 0.00 4.37
211 212 7.278875 TCTTTTTGTATTTTGCAGTTTGGGAT 58.721 30.769 0.00 0.00 0.00 3.85
212 213 7.772757 TCTTTTTGTATTTTGCAGTTTGGGATT 59.227 29.630 0.00 0.00 0.00 3.01
213 214 6.857777 TTTGTATTTTGCAGTTTGGGATTG 57.142 33.333 0.00 0.00 0.00 2.67
214 215 4.892433 TGTATTTTGCAGTTTGGGATTGG 58.108 39.130 0.00 0.00 0.00 3.16
215 216 2.926778 TTTTGCAGTTTGGGATTGGG 57.073 45.000 0.00 0.00 0.00 4.12
216 217 0.396060 TTTGCAGTTTGGGATTGGGC 59.604 50.000 0.00 0.00 0.00 5.36
217 218 0.762082 TTGCAGTTTGGGATTGGGCA 60.762 50.000 0.00 0.00 0.00 5.36
218 219 0.544833 TGCAGTTTGGGATTGGGCAT 60.545 50.000 0.00 0.00 0.00 4.40
219 220 0.176449 GCAGTTTGGGATTGGGCATC 59.824 55.000 0.00 0.00 0.00 3.91
228 229 3.087370 GGATTGGGCATCCCTATTACC 57.913 52.381 3.27 0.00 45.71 2.85
229 230 2.618045 GGATTGGGCATCCCTATTACCG 60.618 54.545 3.27 0.00 45.71 4.02
230 231 0.109723 TTGGGCATCCCTATTACCGC 59.890 55.000 3.27 0.00 45.70 5.68
231 232 0.766674 TGGGCATCCCTATTACCGCT 60.767 55.000 3.27 0.00 45.70 5.52
232 233 0.036294 GGGCATCCCTATTACCGCTC 60.036 60.000 0.00 0.00 41.34 5.03
233 234 0.977395 GGCATCCCTATTACCGCTCT 59.023 55.000 0.00 0.00 0.00 4.09
234 235 1.348036 GGCATCCCTATTACCGCTCTT 59.652 52.381 0.00 0.00 0.00 2.85
235 236 2.224548 GGCATCCCTATTACCGCTCTTT 60.225 50.000 0.00 0.00 0.00 2.52
236 237 3.477530 GCATCCCTATTACCGCTCTTTT 58.522 45.455 0.00 0.00 0.00 2.27
237 238 3.498777 GCATCCCTATTACCGCTCTTTTC 59.501 47.826 0.00 0.00 0.00 2.29
238 239 4.743955 GCATCCCTATTACCGCTCTTTTCT 60.744 45.833 0.00 0.00 0.00 2.52
239 240 4.667519 TCCCTATTACCGCTCTTTTCTC 57.332 45.455 0.00 0.00 0.00 2.87
240 241 3.067742 TCCCTATTACCGCTCTTTTCTCG 59.932 47.826 0.00 0.00 0.00 4.04
241 242 3.181478 CCCTATTACCGCTCTTTTCTCGT 60.181 47.826 0.00 0.00 0.00 4.18
242 243 3.797256 CCTATTACCGCTCTTTTCTCGTG 59.203 47.826 0.00 0.00 0.00 4.35
243 244 2.806608 TTACCGCTCTTTTCTCGTGT 57.193 45.000 0.00 0.00 0.00 4.49
244 245 2.060326 TACCGCTCTTTTCTCGTGTG 57.940 50.000 0.00 0.00 0.00 3.82
245 246 0.387929 ACCGCTCTTTTCTCGTGTGA 59.612 50.000 0.00 0.00 0.00 3.58
246 247 1.000955 ACCGCTCTTTTCTCGTGTGAT 59.999 47.619 0.00 0.00 0.00 3.06
247 248 1.391485 CCGCTCTTTTCTCGTGTGATG 59.609 52.381 0.00 0.00 0.00 3.07
248 249 1.391485 CGCTCTTTTCTCGTGTGATGG 59.609 52.381 0.00 0.00 0.00 3.51
249 250 1.129437 GCTCTTTTCTCGTGTGATGGC 59.871 52.381 0.00 0.00 0.00 4.40
250 251 1.391485 CTCTTTTCTCGTGTGATGGCG 59.609 52.381 0.00 0.00 0.00 5.69
251 252 1.000394 TCTTTTCTCGTGTGATGGCGA 60.000 47.619 0.00 0.00 35.70 5.54
254 255 3.772636 CTCGTGTGATGGCGAGTG 58.227 61.111 5.88 0.00 46.45 3.51
255 256 1.212751 CTCGTGTGATGGCGAGTGA 59.787 57.895 5.88 0.00 46.45 3.41
256 257 0.388520 CTCGTGTGATGGCGAGTGAA 60.389 55.000 5.88 0.00 46.45 3.18
257 258 0.246360 TCGTGTGATGGCGAGTGAAT 59.754 50.000 0.00 0.00 32.98 2.57
258 259 1.474879 TCGTGTGATGGCGAGTGAATA 59.525 47.619 0.00 0.00 32.98 1.75
259 260 2.100749 TCGTGTGATGGCGAGTGAATAT 59.899 45.455 0.00 0.00 32.98 1.28
260 261 3.316868 TCGTGTGATGGCGAGTGAATATA 59.683 43.478 0.00 0.00 32.98 0.86
261 262 3.425525 CGTGTGATGGCGAGTGAATATAC 59.574 47.826 0.00 0.00 0.00 1.47
262 263 4.368315 GTGTGATGGCGAGTGAATATACA 58.632 43.478 0.00 0.00 0.00 2.29
263 264 4.209288 GTGTGATGGCGAGTGAATATACAC 59.791 45.833 0.00 0.00 40.60 2.90
273 274 5.759506 AGTGAATATACACTCGACCTGAG 57.240 43.478 0.00 0.00 46.36 3.35
284 285 3.947910 TCGACCTGAGAATAACCGTTT 57.052 42.857 0.00 0.00 0.00 3.60
286 287 4.990257 TCGACCTGAGAATAACCGTTTAG 58.010 43.478 0.00 0.00 0.00 1.85
287 288 3.550678 CGACCTGAGAATAACCGTTTAGC 59.449 47.826 0.00 0.00 0.00 3.09
288 289 4.501071 GACCTGAGAATAACCGTTTAGCA 58.499 43.478 0.00 0.00 0.00 3.49
289 290 5.099042 ACCTGAGAATAACCGTTTAGCAT 57.901 39.130 0.00 0.00 0.00 3.79
290 291 4.876107 ACCTGAGAATAACCGTTTAGCATG 59.124 41.667 0.00 0.00 0.00 4.06
291 292 4.273480 CCTGAGAATAACCGTTTAGCATGG 59.727 45.833 0.00 0.00 37.62 3.66
292 293 5.092554 TGAGAATAACCGTTTAGCATGGA 57.907 39.130 0.00 0.00 35.17 3.41
293 294 5.492895 TGAGAATAACCGTTTAGCATGGAA 58.507 37.500 0.00 0.00 35.17 3.53
294 295 5.584649 TGAGAATAACCGTTTAGCATGGAAG 59.415 40.000 0.00 0.00 35.17 3.46
295 296 5.741011 AGAATAACCGTTTAGCATGGAAGA 58.259 37.500 0.00 0.00 35.17 2.87
296 297 6.357367 AGAATAACCGTTTAGCATGGAAGAT 58.643 36.000 0.00 0.00 35.17 2.40
297 298 7.506114 AGAATAACCGTTTAGCATGGAAGATA 58.494 34.615 0.00 0.00 35.17 1.98
298 299 7.441458 AGAATAACCGTTTAGCATGGAAGATAC 59.559 37.037 0.00 0.00 35.17 2.24
299 300 4.755266 ACCGTTTAGCATGGAAGATACT 57.245 40.909 0.00 0.00 35.17 2.12
300 301 4.442706 ACCGTTTAGCATGGAAGATACTG 58.557 43.478 0.00 0.00 35.17 2.74
301 302 4.161565 ACCGTTTAGCATGGAAGATACTGA 59.838 41.667 0.00 0.00 35.17 3.41
302 303 5.163301 ACCGTTTAGCATGGAAGATACTGAT 60.163 40.000 0.00 0.00 35.17 2.90
303 304 5.760253 CCGTTTAGCATGGAAGATACTGATT 59.240 40.000 0.00 0.00 32.27 2.57
304 305 6.929049 CCGTTTAGCATGGAAGATACTGATTA 59.071 38.462 0.00 0.00 32.27 1.75
305 306 7.095607 CCGTTTAGCATGGAAGATACTGATTAC 60.096 40.741 0.00 0.00 32.27 1.89
306 307 7.095607 CGTTTAGCATGGAAGATACTGATTACC 60.096 40.741 0.00 0.00 0.00 2.85
307 308 7.618019 TTAGCATGGAAGATACTGATTACCT 57.382 36.000 0.00 0.00 0.00 3.08
308 309 6.107901 AGCATGGAAGATACTGATTACCTC 57.892 41.667 0.00 0.00 0.00 3.85
309 310 5.012561 AGCATGGAAGATACTGATTACCTCC 59.987 44.000 0.00 0.00 0.00 4.30
335 336 9.988815 CTGTCACTACTAGGAAAATGCTTATAT 57.011 33.333 0.00 0.00 0.00 0.86
372 373 0.387565 GCGTTTGTTTGTGTCCCCAT 59.612 50.000 0.00 0.00 0.00 4.00
407 408 1.803334 CAGTAGCGCTGGGTACAAAA 58.197 50.000 22.90 0.00 46.92 2.44
451 452 1.470805 GCAGCGTTGGTTTCTTTTGGT 60.471 47.619 0.16 0.00 0.00 3.67
455 456 2.416162 GCGTTGGTTTCTTTTGGTCACA 60.416 45.455 0.00 0.00 0.00 3.58
462 463 4.879545 GGTTTCTTTTGGTCACACTACTGA 59.120 41.667 0.00 0.00 0.00 3.41
517 518 7.543947 AAAATATTAGTAGTGCGGGTTGTAC 57.456 36.000 0.00 0.00 0.00 2.90
518 519 6.475596 AATATTAGTAGTGCGGGTTGTACT 57.524 37.500 0.00 0.00 46.08 2.73
519 520 3.855689 TTAGTAGTGCGGGTTGTACTC 57.144 47.619 0.00 0.00 43.03 2.59
520 521 0.893447 AGTAGTGCGGGTTGTACTCC 59.107 55.000 0.00 0.00 43.03 3.85
521 522 0.108472 GTAGTGCGGGTTGTACTCCC 60.108 60.000 14.09 14.09 43.03 4.30
522 523 0.251922 TAGTGCGGGTTGTACTCCCT 60.252 55.000 19.24 7.78 43.03 4.20
523 524 1.079336 GTGCGGGTTGTACTCCCTC 60.079 63.158 19.24 14.25 42.56 4.30
524 525 2.288025 TGCGGGTTGTACTCCCTCC 61.288 63.158 19.24 12.80 42.56 4.30
525 526 2.890371 CGGGTTGTACTCCCTCCG 59.110 66.667 19.24 10.66 42.56 4.63
526 527 1.980772 CGGGTTGTACTCCCTCCGT 60.981 63.158 19.24 0.00 42.56 4.69
527 528 1.538687 CGGGTTGTACTCCCTCCGTT 61.539 60.000 19.24 0.00 42.56 4.44
528 529 0.248565 GGGTTGTACTCCCTCCGTTC 59.751 60.000 16.01 0.00 41.58 3.95
529 530 0.248565 GGTTGTACTCCCTCCGTTCC 59.751 60.000 0.00 0.00 0.00 3.62
530 531 1.264295 GTTGTACTCCCTCCGTTCCT 58.736 55.000 0.00 0.00 0.00 3.36
531 532 1.622312 GTTGTACTCCCTCCGTTCCTT 59.378 52.381 0.00 0.00 0.00 3.36
532 533 2.019807 TGTACTCCCTCCGTTCCTTT 57.980 50.000 0.00 0.00 0.00 3.11
533 534 2.332117 TGTACTCCCTCCGTTCCTTTT 58.668 47.619 0.00 0.00 0.00 2.27
534 535 2.707257 TGTACTCCCTCCGTTCCTTTTT 59.293 45.455 0.00 0.00 0.00 1.94
535 536 3.903090 TGTACTCCCTCCGTTCCTTTTTA 59.097 43.478 0.00 0.00 0.00 1.52
536 537 3.697619 ACTCCCTCCGTTCCTTTTTAG 57.302 47.619 0.00 0.00 0.00 1.85
537 538 2.977580 ACTCCCTCCGTTCCTTTTTAGT 59.022 45.455 0.00 0.00 0.00 2.24
538 539 3.393609 ACTCCCTCCGTTCCTTTTTAGTT 59.606 43.478 0.00 0.00 0.00 2.24
539 540 4.001652 CTCCCTCCGTTCCTTTTTAGTTC 58.998 47.826 0.00 0.00 0.00 3.01
540 541 2.740447 CCCTCCGTTCCTTTTTAGTTCG 59.260 50.000 0.00 0.00 0.00 3.95
541 542 2.159037 CCTCCGTTCCTTTTTAGTTCGC 59.841 50.000 0.00 0.00 0.00 4.70
542 543 2.803956 CTCCGTTCCTTTTTAGTTCGCA 59.196 45.455 0.00 0.00 0.00 5.10
543 544 3.404899 TCCGTTCCTTTTTAGTTCGCAT 58.595 40.909 0.00 0.00 0.00 4.73
544 545 4.567971 TCCGTTCCTTTTTAGTTCGCATA 58.432 39.130 0.00 0.00 0.00 3.14
545 546 5.180271 TCCGTTCCTTTTTAGTTCGCATAT 58.820 37.500 0.00 0.00 0.00 1.78
546 547 6.339730 TCCGTTCCTTTTTAGTTCGCATATA 58.660 36.000 0.00 0.00 0.00 0.86
547 548 6.817641 TCCGTTCCTTTTTAGTTCGCATATAA 59.182 34.615 0.00 0.00 0.00 0.98
548 549 7.010738 TCCGTTCCTTTTTAGTTCGCATATAAG 59.989 37.037 0.00 0.00 0.00 1.73
549 550 7.010738 CCGTTCCTTTTTAGTTCGCATATAAGA 59.989 37.037 0.00 0.00 0.00 2.10
550 551 8.548721 CGTTCCTTTTTAGTTCGCATATAAGAT 58.451 33.333 0.00 0.00 0.00 2.40
558 559 9.594478 TTTAGTTCGCATATAAGATTTGACTGA 57.406 29.630 0.00 0.00 0.00 3.41
559 560 9.594478 TTAGTTCGCATATAAGATTTGACTGAA 57.406 29.630 0.00 0.00 0.00 3.02
560 561 8.136057 AGTTCGCATATAAGATTTGACTGAAG 57.864 34.615 0.00 0.00 0.00 3.02
561 562 7.766278 AGTTCGCATATAAGATTTGACTGAAGT 59.234 33.333 0.00 0.00 0.00 3.01
562 563 7.700322 TCGCATATAAGATTTGACTGAAGTC 57.300 36.000 3.41 3.41 44.97 3.01
576 577 6.749923 GACTGAAGTCAAGCCTCATAAAAT 57.250 37.500 5.58 0.00 44.18 1.82
577 578 7.150783 GACTGAAGTCAAGCCTCATAAAATT 57.849 36.000 5.58 0.00 44.18 1.82
578 579 7.530426 ACTGAAGTCAAGCCTCATAAAATTT 57.470 32.000 0.00 0.00 0.00 1.82
579 580 8.635765 ACTGAAGTCAAGCCTCATAAAATTTA 57.364 30.769 0.00 0.00 0.00 1.40
580 581 9.077885 ACTGAAGTCAAGCCTCATAAAATTTAA 57.922 29.630 0.00 0.00 0.00 1.52
581 582 9.346725 CTGAAGTCAAGCCTCATAAAATTTAAC 57.653 33.333 0.00 0.00 0.00 2.01
582 583 8.303876 TGAAGTCAAGCCTCATAAAATTTAACC 58.696 33.333 0.00 0.00 0.00 2.85
583 584 7.775053 AGTCAAGCCTCATAAAATTTAACCA 57.225 32.000 0.00 0.00 0.00 3.67
584 585 8.189119 AGTCAAGCCTCATAAAATTTAACCAA 57.811 30.769 0.00 0.00 0.00 3.67
585 586 8.815912 AGTCAAGCCTCATAAAATTTAACCAAT 58.184 29.630 0.00 0.00 0.00 3.16
586 587 9.435688 GTCAAGCCTCATAAAATTTAACCAATT 57.564 29.630 0.00 0.00 36.57 2.32
624 625 9.234827 AGTATCAACATTCACAATCTGAAATCA 57.765 29.630 0.00 0.00 42.37 2.57
625 626 9.844790 GTATCAACATTCACAATCTGAAATCAA 57.155 29.630 0.00 0.00 42.37 2.57
640 641 9.770097 ATCTGAAATCAATATCAATAGACGTGT 57.230 29.630 0.00 0.00 0.00 4.49
641 642 9.249457 TCTGAAATCAATATCAATAGACGTGTC 57.751 33.333 0.00 0.00 0.00 3.67
642 643 8.940768 TGAAATCAATATCAATAGACGTGTCA 57.059 30.769 0.00 0.00 0.00 3.58
643 644 9.546428 TGAAATCAATATCAATAGACGTGTCAT 57.454 29.630 0.00 0.00 0.00 3.06
644 645 9.803130 GAAATCAATATCAATAGACGTGTCATG 57.197 33.333 0.00 0.00 0.00 3.07
645 646 9.546428 AAATCAATATCAATAGACGTGTCATGA 57.454 29.630 0.00 0.00 0.00 3.07
646 647 7.930513 TCAATATCAATAGACGTGTCATGAC 57.069 36.000 19.27 19.27 0.00 3.06
647 648 7.716612 TCAATATCAATAGACGTGTCATGACT 58.283 34.615 25.55 6.60 0.00 3.41
648 649 8.197439 TCAATATCAATAGACGTGTCATGACTT 58.803 33.333 25.55 10.77 0.00 3.01
649 650 9.463443 CAATATCAATAGACGTGTCATGACTTA 57.537 33.333 25.55 4.51 0.00 2.24
652 653 7.812309 TCAATAGACGTGTCATGACTTAAAG 57.188 36.000 25.55 11.13 0.00 1.85
653 654 7.375834 TCAATAGACGTGTCATGACTTAAAGT 58.624 34.615 25.55 14.15 0.00 2.66
654 655 7.870954 TCAATAGACGTGTCATGACTTAAAGTT 59.129 33.333 25.55 10.34 0.00 2.66
655 656 8.495949 CAATAGACGTGTCATGACTTAAAGTTT 58.504 33.333 25.55 11.95 0.00 2.66
656 657 6.526566 AGACGTGTCATGACTTAAAGTTTC 57.473 37.500 25.55 10.82 0.00 2.78
657 658 6.046593 AGACGTGTCATGACTTAAAGTTTCA 58.953 36.000 25.55 0.00 0.00 2.69
658 659 6.706270 AGACGTGTCATGACTTAAAGTTTCAT 59.294 34.615 25.55 1.50 0.00 2.57
659 660 7.870954 AGACGTGTCATGACTTAAAGTTTCATA 59.129 33.333 25.55 0.00 0.00 2.15
660 661 8.547967 ACGTGTCATGACTTAAAGTTTCATAT 57.452 30.769 25.55 0.00 0.00 1.78
661 662 8.999431 ACGTGTCATGACTTAAAGTTTCATATT 58.001 29.630 25.55 0.00 0.00 1.28
662 663 9.265938 CGTGTCATGACTTAAAGTTTCATATTG 57.734 33.333 25.55 0.00 0.00 1.90
680 681 8.916628 TCATATTGTATAACTTTAGCATGGCA 57.083 30.769 0.00 0.00 0.00 4.92
681 682 9.002600 TCATATTGTATAACTTTAGCATGGCAG 57.997 33.333 0.00 0.00 0.00 4.85
682 683 9.002600 CATATTGTATAACTTTAGCATGGCAGA 57.997 33.333 0.00 0.00 0.00 4.26
683 684 9.745018 ATATTGTATAACTTTAGCATGGCAGAT 57.255 29.630 0.00 0.00 0.00 2.90
684 685 6.866010 TGTATAACTTTAGCATGGCAGATG 57.134 37.500 0.00 0.00 0.00 2.90
685 686 6.356556 TGTATAACTTTAGCATGGCAGATGT 58.643 36.000 0.00 0.00 0.00 3.06
686 687 6.828273 TGTATAACTTTAGCATGGCAGATGTT 59.172 34.615 0.00 0.00 0.00 2.71
687 688 4.445452 AACTTTAGCATGGCAGATGTTG 57.555 40.909 0.00 0.00 0.00 3.33
688 689 3.689347 ACTTTAGCATGGCAGATGTTGA 58.311 40.909 0.00 0.00 0.00 3.18
689 690 4.275810 ACTTTAGCATGGCAGATGTTGAT 58.724 39.130 0.00 0.00 0.00 2.57
690 691 5.439721 ACTTTAGCATGGCAGATGTTGATA 58.560 37.500 0.00 0.00 0.00 2.15
691 692 6.066690 ACTTTAGCATGGCAGATGTTGATAT 58.933 36.000 0.00 0.00 0.00 1.63
692 693 6.548622 ACTTTAGCATGGCAGATGTTGATATT 59.451 34.615 0.00 0.00 0.00 1.28
693 694 6.964807 TTAGCATGGCAGATGTTGATATTT 57.035 33.333 0.00 0.00 0.00 1.40
694 695 5.864418 AGCATGGCAGATGTTGATATTTT 57.136 34.783 0.00 0.00 0.00 1.82
695 696 6.229936 AGCATGGCAGATGTTGATATTTTT 57.770 33.333 0.00 0.00 0.00 1.94
726 727 9.974980 ATAAATACGGTCAAATTTTGTGAAGTT 57.025 25.926 8.89 1.50 0.00 2.66
727 728 8.710835 AAATACGGTCAAATTTTGTGAAGTTT 57.289 26.923 8.89 3.28 0.00 2.66
728 729 7.692908 ATACGGTCAAATTTTGTGAAGTTTG 57.307 32.000 8.89 2.02 41.29 2.93
729 730 5.715070 ACGGTCAAATTTTGTGAAGTTTGA 58.285 33.333 8.89 5.93 44.28 2.69
750 751 9.928236 GTTTGACTTCAGAGAATTCTAATATGC 57.072 33.333 8.25 0.00 30.73 3.14
751 752 9.671279 TTTGACTTCAGAGAATTCTAATATGCA 57.329 29.630 8.25 0.00 30.73 3.96
752 753 8.883954 TGACTTCAGAGAATTCTAATATGCAG 57.116 34.615 8.25 7.58 30.73 4.41
753 754 8.699130 TGACTTCAGAGAATTCTAATATGCAGA 58.301 33.333 8.25 0.00 30.73 4.26
754 755 9.195411 GACTTCAGAGAATTCTAATATGCAGAG 57.805 37.037 8.25 6.79 30.73 3.35
755 756 8.703743 ACTTCAGAGAATTCTAATATGCAGAGT 58.296 33.333 8.25 7.29 30.73 3.24
765 766 8.732746 TTCTAATATGCAGAGTAAAAAGGACC 57.267 34.615 0.00 0.00 0.00 4.46
766 767 6.984474 TCTAATATGCAGAGTAAAAAGGACCG 59.016 38.462 0.00 0.00 0.00 4.79
767 768 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
768 769 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
769 770 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
811 812 7.380431 ACTACTAAGTGAATAGCTATAGCGG 57.620 40.000 18.82 0.00 39.49 5.52
851 852 2.341543 CTCAGCGTGTCCACTGCT 59.658 61.111 9.77 9.77 40.07 4.24
857 1656 2.310233 CGTGTCCACTGCTTCCACG 61.310 63.158 0.00 0.00 42.19 4.94
925 1747 3.851128 GTACCCCTGGCTCTCGGC 61.851 72.222 0.00 0.00 40.90 5.54
1118 1945 1.597854 TGTTCTTGCCGCTGAGTGG 60.598 57.895 7.89 7.89 36.10 4.00
1119 1946 1.301716 GTTCTTGCCGCTGAGTGGA 60.302 57.895 17.69 0.00 34.74 4.02
1273 2100 3.241530 TGACTGCAGGGTCGGCTT 61.242 61.111 19.93 0.00 38.91 4.35
1356 2183 1.937546 GACGGGCAATTGCTCTTGGG 61.938 60.000 27.02 14.37 40.01 4.12
1387 2232 4.613622 GCAGCTGCTCGTTTCTGAATTTTA 60.614 41.667 31.33 0.00 38.21 1.52
1396 2241 7.537306 GCTCGTTTCTGAATTTTAAGTAATGCA 59.463 33.333 0.00 0.00 0.00 3.96
1423 2268 0.314935 ATGCCAAGTGCGTTTTCTGG 59.685 50.000 0.00 0.00 45.60 3.86
1493 2338 5.844004 ACTAGTGTAGGCTTTGGAATATCG 58.156 41.667 0.00 0.00 0.00 2.92
1500 2345 7.658575 GTGTAGGCTTTGGAATATCGGTTATAA 59.341 37.037 0.00 0.00 0.00 0.98
1504 2349 7.119262 AGGCTTTGGAATATCGGTTATAATTCG 59.881 37.037 5.24 5.24 0.00 3.34
1505 2350 7.241376 GCTTTGGAATATCGGTTATAATTCGG 58.759 38.462 10.02 0.00 0.00 4.30
1506 2351 7.094933 GCTTTGGAATATCGGTTATAATTCGGT 60.095 37.037 10.02 6.72 0.00 4.69
1567 2414 5.632764 CAGATAGATGCACGATTAGTTCAGG 59.367 44.000 0.00 0.00 27.74 3.86
1624 2477 6.036191 GCTGCTCAAGTTTAGTTCAGGTATAC 59.964 42.308 0.00 0.00 0.00 1.47
1660 2513 1.003959 TATGTTGCAGCAGTCCGCA 60.004 52.632 9.71 0.00 46.13 5.69
1688 2541 2.683362 TGATTCTCGTGTCGCTGATAGT 59.317 45.455 0.00 0.00 0.00 2.12
1713 2566 2.914097 AGTCGGTTCCGGTCCGTT 60.914 61.111 28.71 19.91 46.86 4.44
1806 2674 5.485662 AGCATTATTTCTAACGGCAAGTC 57.514 39.130 0.00 0.00 0.00 3.01
1846 2715 9.512588 AATATATCAATCCACAGAAAGGATGTC 57.487 33.333 0.00 0.00 44.94 3.06
1917 2795 2.795231 ACAATGCTGCAGTCCTACAT 57.205 45.000 16.64 6.77 0.00 2.29
2031 2923 5.167303 AGTCTTTTTGGATGGTCCTCTAC 57.833 43.478 0.00 0.00 37.46 2.59
2356 4299 5.875359 TCTATTTTACACACACACACACACA 59.125 36.000 0.00 0.00 0.00 3.72
2357 4300 3.815337 TTTACACACACACACACACAC 57.185 42.857 0.00 0.00 0.00 3.82
2358 4301 2.457366 TACACACACACACACACACA 57.543 45.000 0.00 0.00 0.00 3.72
2359 4302 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2360 4303 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2361 4304 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2362 4305 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2363 4306 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2364 4307 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2365 4308 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2486 4433 7.496529 TCACTACATTGGTTTGAAAGAAGAG 57.503 36.000 0.00 0.00 0.00 2.85
2492 4439 4.086706 TGGTTTGAAAGAAGAGACTCCC 57.913 45.455 0.00 0.00 0.00 4.30
2798 4753 8.934023 ACCAAGAGTTAAATTGAAATGACCTA 57.066 30.769 0.00 0.00 0.00 3.08
2831 4786 7.639378 AGGGTACAATGTTGGTAATAATCTGT 58.361 34.615 0.00 0.00 0.00 3.41
2904 4871 2.736192 GTGCACAAACTTTGCTTGTTGT 59.264 40.909 13.17 0.00 40.86 3.32
2916 4883 4.241590 TGCTTGTTGTAATTTGCCTCAG 57.758 40.909 0.00 0.00 0.00 3.35
2938 4905 6.990939 TCAGAAGCTTGGATTCAGAATCTATG 59.009 38.462 20.41 17.31 38.01 2.23
2959 4926 8.097038 TCTATGATAAGATTTGGTCATGCCTAC 58.903 37.037 7.54 0.00 38.35 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.400884 TGTTTTAAAACTTGAGCTCTGGCA 59.599 37.500 26.76 4.21 39.14 4.92
3 4 6.260936 TCTCTGTTTTAAAACTTGAGCTCTGG 59.739 38.462 29.03 17.33 38.62 3.86
4 5 7.251704 TCTCTGTTTTAAAACTTGAGCTCTG 57.748 36.000 29.03 17.76 38.62 3.35
5 6 9.561069 TTATCTCTGTTTTAAAACTTGAGCTCT 57.439 29.630 29.03 22.57 38.62 4.09
28 29 9.754382 GGTGCATGTCTCAAAATAATCATTTAT 57.246 29.630 0.00 0.00 33.09 1.40
29 30 8.196771 GGGTGCATGTCTCAAAATAATCATTTA 58.803 33.333 0.00 0.00 33.09 1.40
30 31 7.043565 GGGTGCATGTCTCAAAATAATCATTT 58.956 34.615 0.00 0.00 35.84 2.32
31 32 6.381994 AGGGTGCATGTCTCAAAATAATCATT 59.618 34.615 0.00 0.00 0.00 2.57
32 33 5.895534 AGGGTGCATGTCTCAAAATAATCAT 59.104 36.000 0.00 0.00 0.00 2.45
33 34 5.263599 AGGGTGCATGTCTCAAAATAATCA 58.736 37.500 0.00 0.00 0.00 2.57
34 35 5.841957 AGGGTGCATGTCTCAAAATAATC 57.158 39.130 0.00 0.00 0.00 1.75
35 36 5.954150 AGAAGGGTGCATGTCTCAAAATAAT 59.046 36.000 0.00 0.00 0.00 1.28
36 37 5.324409 AGAAGGGTGCATGTCTCAAAATAA 58.676 37.500 0.00 0.00 0.00 1.40
37 38 4.922206 AGAAGGGTGCATGTCTCAAAATA 58.078 39.130 0.00 0.00 0.00 1.40
38 39 3.760684 GAGAAGGGTGCATGTCTCAAAAT 59.239 43.478 11.72 0.00 37.15 1.82
39 40 3.149196 GAGAAGGGTGCATGTCTCAAAA 58.851 45.455 11.72 0.00 37.15 2.44
40 41 2.106338 TGAGAAGGGTGCATGTCTCAAA 59.894 45.455 15.18 0.00 42.61 2.69
41 42 1.699083 TGAGAAGGGTGCATGTCTCAA 59.301 47.619 15.18 4.24 42.61 3.02
42 43 1.351076 TGAGAAGGGTGCATGTCTCA 58.649 50.000 14.11 14.11 43.17 3.27
43 44 2.706339 ATGAGAAGGGTGCATGTCTC 57.294 50.000 10.35 10.35 37.59 3.36
44 45 3.446442 AAATGAGAAGGGTGCATGTCT 57.554 42.857 0.00 0.00 0.00 3.41
45 46 4.265073 AGTAAATGAGAAGGGTGCATGTC 58.735 43.478 0.00 0.00 0.00 3.06
46 47 4.307032 AGTAAATGAGAAGGGTGCATGT 57.693 40.909 0.00 0.00 0.00 3.21
47 48 4.701651 TGAAGTAAATGAGAAGGGTGCATG 59.298 41.667 0.00 0.00 0.00 4.06
48 49 4.702131 GTGAAGTAAATGAGAAGGGTGCAT 59.298 41.667 0.00 0.00 0.00 3.96
49 50 4.072131 GTGAAGTAAATGAGAAGGGTGCA 58.928 43.478 0.00 0.00 0.00 4.57
50 51 3.125316 CGTGAAGTAAATGAGAAGGGTGC 59.875 47.826 0.00 0.00 0.00 5.01
51 52 4.389077 GTCGTGAAGTAAATGAGAAGGGTG 59.611 45.833 0.00 0.00 0.00 4.61
52 53 4.283722 AGTCGTGAAGTAAATGAGAAGGGT 59.716 41.667 0.00 0.00 0.00 4.34
53 54 4.822026 AGTCGTGAAGTAAATGAGAAGGG 58.178 43.478 0.00 0.00 0.00 3.95
54 55 7.258441 TGATAGTCGTGAAGTAAATGAGAAGG 58.742 38.462 0.00 0.00 0.00 3.46
55 56 7.971168 ACTGATAGTCGTGAAGTAAATGAGAAG 59.029 37.037 0.00 0.00 0.00 2.85
56 57 7.827701 ACTGATAGTCGTGAAGTAAATGAGAA 58.172 34.615 0.00 0.00 0.00 2.87
57 58 7.392494 ACTGATAGTCGTGAAGTAAATGAGA 57.608 36.000 0.00 0.00 0.00 3.27
58 59 9.737427 ATAACTGATAGTCGTGAAGTAAATGAG 57.263 33.333 0.00 0.00 0.00 2.90
59 60 9.731819 GATAACTGATAGTCGTGAAGTAAATGA 57.268 33.333 0.00 0.00 0.00 2.57
60 61 9.516314 TGATAACTGATAGTCGTGAAGTAAATG 57.484 33.333 0.00 0.00 0.00 2.32
65 66 9.900710 GATATTGATAACTGATAGTCGTGAAGT 57.099 33.333 0.00 0.00 0.00 3.01
68 69 8.731605 GGAGATATTGATAACTGATAGTCGTGA 58.268 37.037 0.00 0.00 0.00 4.35
69 70 7.971168 GGGAGATATTGATAACTGATAGTCGTG 59.029 40.741 0.00 0.00 0.00 4.35
70 71 7.670140 TGGGAGATATTGATAACTGATAGTCGT 59.330 37.037 0.00 0.00 0.00 4.34
71 72 8.056407 TGGGAGATATTGATAACTGATAGTCG 57.944 38.462 0.00 0.00 0.00 4.18
72 73 9.814899 CATGGGAGATATTGATAACTGATAGTC 57.185 37.037 0.00 0.00 0.00 2.59
73 74 8.263640 GCATGGGAGATATTGATAACTGATAGT 58.736 37.037 0.00 0.00 0.00 2.12
74 75 8.484575 AGCATGGGAGATATTGATAACTGATAG 58.515 37.037 0.00 0.00 0.00 2.08
75 76 8.384693 AGCATGGGAGATATTGATAACTGATA 57.615 34.615 0.00 0.00 0.00 2.15
76 77 7.268212 AGCATGGGAGATATTGATAACTGAT 57.732 36.000 0.00 0.00 0.00 2.90
77 78 6.692849 AGCATGGGAGATATTGATAACTGA 57.307 37.500 0.00 0.00 0.00 3.41
78 79 8.725148 GTTTAGCATGGGAGATATTGATAACTG 58.275 37.037 0.00 0.00 0.00 3.16
79 80 8.439971 TGTTTAGCATGGGAGATATTGATAACT 58.560 33.333 0.00 0.00 0.00 2.24
80 81 8.621532 TGTTTAGCATGGGAGATATTGATAAC 57.378 34.615 0.00 0.00 0.00 1.89
81 82 7.884877 CCTGTTTAGCATGGGAGATATTGATAA 59.115 37.037 0.00 0.00 0.00 1.75
82 83 7.397221 CCTGTTTAGCATGGGAGATATTGATA 58.603 38.462 0.00 0.00 0.00 2.15
83 84 6.243900 CCTGTTTAGCATGGGAGATATTGAT 58.756 40.000 0.00 0.00 0.00 2.57
84 85 5.624159 CCTGTTTAGCATGGGAGATATTGA 58.376 41.667 0.00 0.00 0.00 2.57
85 86 4.217118 GCCTGTTTAGCATGGGAGATATTG 59.783 45.833 0.00 0.00 0.00 1.90
86 87 4.105377 AGCCTGTTTAGCATGGGAGATATT 59.895 41.667 0.00 0.00 0.00 1.28
87 88 3.654806 AGCCTGTTTAGCATGGGAGATAT 59.345 43.478 0.00 0.00 0.00 1.63
88 89 3.048600 AGCCTGTTTAGCATGGGAGATA 58.951 45.455 0.00 0.00 0.00 1.98
89 90 1.849039 AGCCTGTTTAGCATGGGAGAT 59.151 47.619 0.00 0.00 0.00 2.75
90 91 1.289160 AGCCTGTTTAGCATGGGAGA 58.711 50.000 0.00 0.00 0.00 3.71
91 92 2.171448 ACTAGCCTGTTTAGCATGGGAG 59.829 50.000 0.00 0.00 0.00 4.30
92 93 2.092968 CACTAGCCTGTTTAGCATGGGA 60.093 50.000 0.00 0.00 0.00 4.37
93 94 2.292267 CACTAGCCTGTTTAGCATGGG 58.708 52.381 0.00 0.00 0.00 4.00
94 95 2.292267 CCACTAGCCTGTTTAGCATGG 58.708 52.381 0.00 0.00 0.00 3.66
95 96 2.679837 CACCACTAGCCTGTTTAGCATG 59.320 50.000 0.00 0.00 0.00 4.06
96 97 2.356125 CCACCACTAGCCTGTTTAGCAT 60.356 50.000 0.00 0.00 0.00 3.79
97 98 1.003118 CCACCACTAGCCTGTTTAGCA 59.997 52.381 0.00 0.00 0.00 3.49
98 99 1.003233 ACCACCACTAGCCTGTTTAGC 59.997 52.381 0.00 0.00 0.00 3.09
99 100 3.335579 GAACCACCACTAGCCTGTTTAG 58.664 50.000 0.00 0.00 0.00 1.85
100 101 2.039348 GGAACCACCACTAGCCTGTTTA 59.961 50.000 0.00 0.00 38.79 2.01
101 102 1.202891 GGAACCACCACTAGCCTGTTT 60.203 52.381 0.00 0.00 38.79 2.83
102 103 0.400594 GGAACCACCACTAGCCTGTT 59.599 55.000 0.00 0.00 38.79 3.16
103 104 2.067197 GGAACCACCACTAGCCTGT 58.933 57.895 0.00 0.00 38.79 4.00
117 118 5.182570 ACCTTTACTTTTATCGCTTGGGAAC 59.817 40.000 0.00 0.00 0.00 3.62
118 119 5.318630 ACCTTTACTTTTATCGCTTGGGAA 58.681 37.500 0.00 0.00 0.00 3.97
119 120 4.913784 ACCTTTACTTTTATCGCTTGGGA 58.086 39.130 0.00 0.00 0.00 4.37
120 121 5.638596 AACCTTTACTTTTATCGCTTGGG 57.361 39.130 0.00 0.00 0.00 4.12
121 122 6.581166 GTCAAACCTTTACTTTTATCGCTTGG 59.419 38.462 0.00 0.00 0.00 3.61
122 123 7.360361 AGTCAAACCTTTACTTTTATCGCTTG 58.640 34.615 0.00 0.00 0.00 4.01
123 124 7.506328 AGTCAAACCTTTACTTTTATCGCTT 57.494 32.000 0.00 0.00 0.00 4.68
124 125 7.227910 TGAAGTCAAACCTTTACTTTTATCGCT 59.772 33.333 0.00 0.00 33.72 4.93
125 126 7.357303 TGAAGTCAAACCTTTACTTTTATCGC 58.643 34.615 0.00 0.00 33.72 4.58
126 127 9.893305 AATGAAGTCAAACCTTTACTTTTATCG 57.107 29.630 0.00 0.00 33.72 2.92
130 131 9.416284 TCCTAATGAAGTCAAACCTTTACTTTT 57.584 29.630 0.00 0.00 33.72 2.27
131 132 8.990163 TCCTAATGAAGTCAAACCTTTACTTT 57.010 30.769 0.00 0.00 33.72 2.66
132 133 8.218488 ACTCCTAATGAAGTCAAACCTTTACTT 58.782 33.333 0.00 0.00 36.20 2.24
133 134 7.746703 ACTCCTAATGAAGTCAAACCTTTACT 58.253 34.615 0.00 0.00 0.00 2.24
134 135 7.981102 ACTCCTAATGAAGTCAAACCTTTAC 57.019 36.000 0.00 0.00 0.00 2.01
135 136 8.990163 AAACTCCTAATGAAGTCAAACCTTTA 57.010 30.769 0.00 0.00 0.00 1.85
136 137 7.898014 AAACTCCTAATGAAGTCAAACCTTT 57.102 32.000 0.00 0.00 0.00 3.11
137 138 7.898014 AAAACTCCTAATGAAGTCAAACCTT 57.102 32.000 0.00 0.00 0.00 3.50
138 139 7.342026 ACAAAAACTCCTAATGAAGTCAAACCT 59.658 33.333 0.00 0.00 0.00 3.50
139 140 7.489160 ACAAAAACTCCTAATGAAGTCAAACC 58.511 34.615 0.00 0.00 0.00 3.27
140 141 8.926715 AACAAAAACTCCTAATGAAGTCAAAC 57.073 30.769 0.00 0.00 0.00 2.93
141 142 9.364989 CAAACAAAAACTCCTAATGAAGTCAAA 57.635 29.630 0.00 0.00 0.00 2.69
142 143 8.744652 TCAAACAAAAACTCCTAATGAAGTCAA 58.255 29.630 0.00 0.00 0.00 3.18
143 144 8.287439 TCAAACAAAAACTCCTAATGAAGTCA 57.713 30.769 0.00 0.00 0.00 3.41
144 145 9.750125 AATCAAACAAAAACTCCTAATGAAGTC 57.250 29.630 0.00 0.00 0.00 3.01
152 153 8.234546 GCTCGAATAATCAAACAAAAACTCCTA 58.765 33.333 0.00 0.00 0.00 2.94
153 154 7.084486 GCTCGAATAATCAAACAAAAACTCCT 58.916 34.615 0.00 0.00 0.00 3.69
154 155 6.861055 TGCTCGAATAATCAAACAAAAACTCC 59.139 34.615 0.00 0.00 0.00 3.85
155 156 7.851822 TGCTCGAATAATCAAACAAAAACTC 57.148 32.000 0.00 0.00 0.00 3.01
156 157 8.816640 ATTGCTCGAATAATCAAACAAAAACT 57.183 26.923 0.00 0.00 0.00 2.66
160 161 9.906660 AGTTAATTGCTCGAATAATCAAACAAA 57.093 25.926 14.77 0.00 0.00 2.83
161 162 9.554724 GAGTTAATTGCTCGAATAATCAAACAA 57.445 29.630 14.77 0.00 0.00 2.83
162 163 8.946085 AGAGTTAATTGCTCGAATAATCAAACA 58.054 29.630 14.77 0.00 37.99 2.83
163 164 9.774742 AAGAGTTAATTGCTCGAATAATCAAAC 57.225 29.630 6.31 0.04 37.99 2.93
172 173 9.959749 AAATACAAAAAGAGTTAATTGCTCGAA 57.040 25.926 6.31 0.00 37.99 3.71
173 174 9.959749 AAAATACAAAAAGAGTTAATTGCTCGA 57.040 25.926 6.31 0.00 37.99 4.04
174 175 9.993881 CAAAATACAAAAAGAGTTAATTGCTCG 57.006 29.630 6.31 0.00 37.99 5.03
175 176 9.797473 GCAAAATACAAAAAGAGTTAATTGCTC 57.203 29.630 0.00 4.32 36.33 4.26
176 177 9.323985 TGCAAAATACAAAAAGAGTTAATTGCT 57.676 25.926 0.00 0.00 39.08 3.91
177 178 9.584839 CTGCAAAATACAAAAAGAGTTAATTGC 57.415 29.630 0.00 0.00 38.86 3.56
182 183 9.092876 CCAAACTGCAAAATACAAAAAGAGTTA 57.907 29.630 0.00 0.00 0.00 2.24
183 184 7.065683 CCCAAACTGCAAAATACAAAAAGAGTT 59.934 33.333 0.00 0.00 0.00 3.01
184 185 6.538381 CCCAAACTGCAAAATACAAAAAGAGT 59.462 34.615 0.00 0.00 0.00 3.24
185 186 6.760770 TCCCAAACTGCAAAATACAAAAAGAG 59.239 34.615 0.00 0.00 0.00 2.85
186 187 6.644347 TCCCAAACTGCAAAATACAAAAAGA 58.356 32.000 0.00 0.00 0.00 2.52
187 188 6.917217 TCCCAAACTGCAAAATACAAAAAG 57.083 33.333 0.00 0.00 0.00 2.27
188 189 7.201767 CCAATCCCAAACTGCAAAATACAAAAA 60.202 33.333 0.00 0.00 0.00 1.94
189 190 6.261826 CCAATCCCAAACTGCAAAATACAAAA 59.738 34.615 0.00 0.00 0.00 2.44
190 191 5.762218 CCAATCCCAAACTGCAAAATACAAA 59.238 36.000 0.00 0.00 0.00 2.83
191 192 5.303971 CCAATCCCAAACTGCAAAATACAA 58.696 37.500 0.00 0.00 0.00 2.41
192 193 4.262808 CCCAATCCCAAACTGCAAAATACA 60.263 41.667 0.00 0.00 0.00 2.29
193 194 4.252878 CCCAATCCCAAACTGCAAAATAC 58.747 43.478 0.00 0.00 0.00 1.89
194 195 3.307339 GCCCAATCCCAAACTGCAAAATA 60.307 43.478 0.00 0.00 0.00 1.40
195 196 2.552809 GCCCAATCCCAAACTGCAAAAT 60.553 45.455 0.00 0.00 0.00 1.82
196 197 1.202746 GCCCAATCCCAAACTGCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
197 198 0.396060 GCCCAATCCCAAACTGCAAA 59.604 50.000 0.00 0.00 0.00 3.68
198 199 0.762082 TGCCCAATCCCAAACTGCAA 60.762 50.000 0.00 0.00 0.00 4.08
199 200 0.544833 ATGCCCAATCCCAAACTGCA 60.545 50.000 0.00 0.00 0.00 4.41
200 201 0.176449 GATGCCCAATCCCAAACTGC 59.824 55.000 0.00 0.00 0.00 4.40
213 214 0.036294 GAGCGGTAATAGGGATGCCC 60.036 60.000 0.00 0.00 45.90 5.36
214 215 0.977395 AGAGCGGTAATAGGGATGCC 59.023 55.000 0.00 0.00 0.00 4.40
215 216 2.841442 AAGAGCGGTAATAGGGATGC 57.159 50.000 0.00 0.00 0.00 3.91
216 217 4.962155 AGAAAAGAGCGGTAATAGGGATG 58.038 43.478 0.00 0.00 0.00 3.51
217 218 4.262079 CGAGAAAAGAGCGGTAATAGGGAT 60.262 45.833 0.00 0.00 0.00 3.85
218 219 3.067742 CGAGAAAAGAGCGGTAATAGGGA 59.932 47.826 0.00 0.00 0.00 4.20
219 220 3.181478 ACGAGAAAAGAGCGGTAATAGGG 60.181 47.826 0.00 0.00 0.00 3.53
220 221 3.797256 CACGAGAAAAGAGCGGTAATAGG 59.203 47.826 0.00 0.00 0.00 2.57
221 222 4.265556 CACACGAGAAAAGAGCGGTAATAG 59.734 45.833 0.00 0.00 0.00 1.73
222 223 4.082625 TCACACGAGAAAAGAGCGGTAATA 60.083 41.667 0.00 0.00 0.00 0.98
223 224 2.993899 CACACGAGAAAAGAGCGGTAAT 59.006 45.455 0.00 0.00 0.00 1.89
224 225 2.034939 TCACACGAGAAAAGAGCGGTAA 59.965 45.455 0.00 0.00 0.00 2.85
225 226 1.610038 TCACACGAGAAAAGAGCGGTA 59.390 47.619 0.00 0.00 0.00 4.02
226 227 0.387929 TCACACGAGAAAAGAGCGGT 59.612 50.000 0.00 0.00 0.00 5.68
227 228 1.391485 CATCACACGAGAAAAGAGCGG 59.609 52.381 0.00 0.00 0.00 5.52
228 229 1.391485 CCATCACACGAGAAAAGAGCG 59.609 52.381 0.00 0.00 0.00 5.03
229 230 1.129437 GCCATCACACGAGAAAAGAGC 59.871 52.381 0.00 0.00 0.00 4.09
230 231 1.391485 CGCCATCACACGAGAAAAGAG 59.609 52.381 0.00 0.00 0.00 2.85
231 232 1.000394 TCGCCATCACACGAGAAAAGA 60.000 47.619 0.00 0.00 33.69 2.52
232 233 1.428448 TCGCCATCACACGAGAAAAG 58.572 50.000 0.00 0.00 33.69 2.27
233 234 3.597550 TCGCCATCACACGAGAAAA 57.402 47.368 0.00 0.00 33.69 2.29
238 239 0.246360 ATTCACTCGCCATCACACGA 59.754 50.000 0.00 0.00 36.73 4.35
239 240 1.921243 TATTCACTCGCCATCACACG 58.079 50.000 0.00 0.00 0.00 4.49
240 241 4.209288 GTGTATATTCACTCGCCATCACAC 59.791 45.833 5.30 0.00 35.68 3.82
241 242 4.099419 AGTGTATATTCACTCGCCATCACA 59.901 41.667 9.03 0.00 44.07 3.58
242 243 4.621991 AGTGTATATTCACTCGCCATCAC 58.378 43.478 9.03 0.00 44.07 3.06
243 244 4.937201 AGTGTATATTCACTCGCCATCA 57.063 40.909 9.03 0.00 44.07 3.07
252 253 5.752892 TCTCAGGTCGAGTGTATATTCAC 57.247 43.478 4.40 4.40 42.88 3.18
253 254 6.961360 ATTCTCAGGTCGAGTGTATATTCA 57.039 37.500 0.00 0.00 42.88 2.57
254 255 7.808856 GGTTATTCTCAGGTCGAGTGTATATTC 59.191 40.741 0.00 0.00 42.88 1.75
255 256 7.521748 CGGTTATTCTCAGGTCGAGTGTATATT 60.522 40.741 0.00 0.00 42.88 1.28
256 257 6.072618 CGGTTATTCTCAGGTCGAGTGTATAT 60.073 42.308 0.00 0.00 42.88 0.86
257 258 5.237996 CGGTTATTCTCAGGTCGAGTGTATA 59.762 44.000 0.00 0.00 42.88 1.47
258 259 4.036498 CGGTTATTCTCAGGTCGAGTGTAT 59.964 45.833 0.00 0.00 42.88 2.29
259 260 3.376234 CGGTTATTCTCAGGTCGAGTGTA 59.624 47.826 0.00 0.00 42.88 2.90
260 261 2.163815 CGGTTATTCTCAGGTCGAGTGT 59.836 50.000 0.00 0.00 42.88 3.55
261 262 2.163815 ACGGTTATTCTCAGGTCGAGTG 59.836 50.000 0.00 0.00 42.88 3.51
262 263 2.444421 ACGGTTATTCTCAGGTCGAGT 58.556 47.619 0.00 0.00 42.88 4.18
263 264 3.505464 AACGGTTATTCTCAGGTCGAG 57.495 47.619 0.00 0.00 43.80 4.04
264 265 3.947910 AAACGGTTATTCTCAGGTCGA 57.052 42.857 0.00 0.00 0.00 4.20
265 266 3.550678 GCTAAACGGTTATTCTCAGGTCG 59.449 47.826 0.00 0.00 0.00 4.79
266 267 4.501071 TGCTAAACGGTTATTCTCAGGTC 58.499 43.478 0.00 0.00 0.00 3.85
267 268 4.546829 TGCTAAACGGTTATTCTCAGGT 57.453 40.909 0.00 0.00 0.00 4.00
268 269 4.273480 CCATGCTAAACGGTTATTCTCAGG 59.727 45.833 0.00 0.00 0.00 3.86
269 270 5.116180 TCCATGCTAAACGGTTATTCTCAG 58.884 41.667 0.00 0.00 0.00 3.35
270 271 5.092554 TCCATGCTAAACGGTTATTCTCA 57.907 39.130 0.00 0.00 0.00 3.27
271 272 5.815740 TCTTCCATGCTAAACGGTTATTCTC 59.184 40.000 0.00 0.00 0.00 2.87
272 273 5.741011 TCTTCCATGCTAAACGGTTATTCT 58.259 37.500 0.00 0.00 0.00 2.40
273 274 6.619801 ATCTTCCATGCTAAACGGTTATTC 57.380 37.500 0.00 0.00 0.00 1.75
274 275 7.226720 CAGTATCTTCCATGCTAAACGGTTATT 59.773 37.037 0.00 0.00 0.00 1.40
275 276 6.706270 CAGTATCTTCCATGCTAAACGGTTAT 59.294 38.462 0.00 0.00 0.00 1.89
276 277 6.046593 CAGTATCTTCCATGCTAAACGGTTA 58.953 40.000 0.00 0.00 0.00 2.85
277 278 4.876107 CAGTATCTTCCATGCTAAACGGTT 59.124 41.667 0.00 0.00 0.00 4.44
278 279 4.161565 TCAGTATCTTCCATGCTAAACGGT 59.838 41.667 0.00 0.00 0.00 4.83
279 280 4.693283 TCAGTATCTTCCATGCTAAACGG 58.307 43.478 0.00 0.00 0.00 4.44
280 281 6.851222 AATCAGTATCTTCCATGCTAAACG 57.149 37.500 0.00 0.00 0.00 3.60
281 282 7.934120 AGGTAATCAGTATCTTCCATGCTAAAC 59.066 37.037 0.00 0.00 0.00 2.01
282 283 8.034313 AGGTAATCAGTATCTTCCATGCTAAA 57.966 34.615 0.00 0.00 0.00 1.85
283 284 7.256332 GGAGGTAATCAGTATCTTCCATGCTAA 60.256 40.741 0.00 0.00 0.00 3.09
284 285 6.211584 GGAGGTAATCAGTATCTTCCATGCTA 59.788 42.308 0.00 0.00 0.00 3.49
285 286 5.012561 GGAGGTAATCAGTATCTTCCATGCT 59.987 44.000 0.00 0.00 0.00 3.79
286 287 5.012561 AGGAGGTAATCAGTATCTTCCATGC 59.987 44.000 0.00 0.00 0.00 4.06
287 288 6.042552 ACAGGAGGTAATCAGTATCTTCCATG 59.957 42.308 0.00 0.00 0.00 3.66
288 289 6.146760 ACAGGAGGTAATCAGTATCTTCCAT 58.853 40.000 0.00 0.00 0.00 3.41
289 290 5.529289 ACAGGAGGTAATCAGTATCTTCCA 58.471 41.667 0.00 0.00 0.00 3.53
290 291 5.598830 TGACAGGAGGTAATCAGTATCTTCC 59.401 44.000 0.00 0.00 0.00 3.46
291 292 6.322712 AGTGACAGGAGGTAATCAGTATCTTC 59.677 42.308 0.00 0.00 0.00 2.87
292 293 6.198639 AGTGACAGGAGGTAATCAGTATCTT 58.801 40.000 0.00 0.00 0.00 2.40
293 294 5.772004 AGTGACAGGAGGTAATCAGTATCT 58.228 41.667 0.00 0.00 0.00 1.98
294 295 6.773685 AGTAGTGACAGGAGGTAATCAGTATC 59.226 42.308 0.00 0.00 31.46 2.24
295 296 6.674573 AGTAGTGACAGGAGGTAATCAGTAT 58.325 40.000 0.00 0.00 31.46 2.12
296 297 6.075949 AGTAGTGACAGGAGGTAATCAGTA 57.924 41.667 0.00 0.00 0.00 2.74
297 298 4.936802 AGTAGTGACAGGAGGTAATCAGT 58.063 43.478 0.00 0.00 0.00 3.41
298 299 5.533154 CCTAGTAGTGACAGGAGGTAATCAG 59.467 48.000 0.00 0.00 0.00 2.90
299 300 5.193124 TCCTAGTAGTGACAGGAGGTAATCA 59.807 44.000 0.00 0.00 33.48 2.57
300 301 5.692928 TCCTAGTAGTGACAGGAGGTAATC 58.307 45.833 0.00 0.00 33.48 1.75
301 302 5.728937 TCCTAGTAGTGACAGGAGGTAAT 57.271 43.478 0.00 0.00 33.48 1.89
302 303 5.525454 TTCCTAGTAGTGACAGGAGGTAA 57.475 43.478 0.00 0.00 39.58 2.85
303 304 5.525454 TTTCCTAGTAGTGACAGGAGGTA 57.475 43.478 0.00 0.00 39.58 3.08
304 305 4.399483 TTTCCTAGTAGTGACAGGAGGT 57.601 45.455 0.00 0.00 39.58 3.85
305 306 5.665459 CATTTTCCTAGTAGTGACAGGAGG 58.335 45.833 0.00 0.00 39.58 4.30
306 307 5.105146 AGCATTTTCCTAGTAGTGACAGGAG 60.105 44.000 0.00 0.00 39.58 3.69
307 308 4.777896 AGCATTTTCCTAGTAGTGACAGGA 59.222 41.667 0.00 0.00 36.68 3.86
308 309 5.091261 AGCATTTTCCTAGTAGTGACAGG 57.909 43.478 0.00 0.00 0.00 4.00
309 310 9.988815 ATATAAGCATTTTCCTAGTAGTGACAG 57.011 33.333 0.00 0.00 0.00 3.51
335 336 7.605449 ACAAACGCTACTGGTAAACTTCTATA 58.395 34.615 0.00 0.00 0.00 1.31
407 408 1.956629 AAGCCATACCAGTAGCGCGT 61.957 55.000 8.43 0.00 0.00 6.01
513 514 2.019807 AAAGGAACGGAGGGAGTACA 57.980 50.000 0.00 0.00 0.00 2.90
514 515 3.413846 AAAAAGGAACGGAGGGAGTAC 57.586 47.619 0.00 0.00 0.00 2.73
515 516 4.162651 ACTAAAAAGGAACGGAGGGAGTA 58.837 43.478 0.00 0.00 0.00 2.59
516 517 2.977580 ACTAAAAAGGAACGGAGGGAGT 59.022 45.455 0.00 0.00 0.00 3.85
517 518 3.697619 ACTAAAAAGGAACGGAGGGAG 57.302 47.619 0.00 0.00 0.00 4.30
518 519 3.555586 CGAACTAAAAAGGAACGGAGGGA 60.556 47.826 0.00 0.00 0.00 4.20
519 520 2.740447 CGAACTAAAAAGGAACGGAGGG 59.260 50.000 0.00 0.00 0.00 4.30
520 521 2.159037 GCGAACTAAAAAGGAACGGAGG 59.841 50.000 0.00 0.00 0.00 4.30
521 522 2.803956 TGCGAACTAAAAAGGAACGGAG 59.196 45.455 0.00 0.00 0.00 4.63
522 523 2.836262 TGCGAACTAAAAAGGAACGGA 58.164 42.857 0.00 0.00 0.00 4.69
523 524 3.824414 ATGCGAACTAAAAAGGAACGG 57.176 42.857 0.00 0.00 0.00 4.44
524 525 7.902032 TCTTATATGCGAACTAAAAAGGAACG 58.098 34.615 0.00 0.00 0.00 3.95
532 533 9.594478 TCAGTCAAATCTTATATGCGAACTAAA 57.406 29.630 0.00 0.00 0.00 1.85
533 534 9.594478 TTCAGTCAAATCTTATATGCGAACTAA 57.406 29.630 0.00 0.00 0.00 2.24
534 535 9.249457 CTTCAGTCAAATCTTATATGCGAACTA 57.751 33.333 0.00 0.00 0.00 2.24
535 536 7.766278 ACTTCAGTCAAATCTTATATGCGAACT 59.234 33.333 0.00 0.00 0.00 3.01
536 537 7.910304 ACTTCAGTCAAATCTTATATGCGAAC 58.090 34.615 0.00 0.00 0.00 3.95
537 538 8.131455 GACTTCAGTCAAATCTTATATGCGAA 57.869 34.615 1.86 0.00 44.18 4.70
538 539 7.700322 GACTTCAGTCAAATCTTATATGCGA 57.300 36.000 1.86 0.00 44.18 5.10
553 554 6.749923 ATTTTATGAGGCTTGACTTCAGTC 57.250 37.500 0.00 0.00 44.97 3.51
554 555 7.530426 AAATTTTATGAGGCTTGACTTCAGT 57.470 32.000 0.00 0.00 0.00 3.41
555 556 9.346725 GTTAAATTTTATGAGGCTTGACTTCAG 57.653 33.333 0.00 0.00 0.00 3.02
556 557 8.303876 GGTTAAATTTTATGAGGCTTGACTTCA 58.696 33.333 0.00 0.00 0.00 3.02
557 558 8.303876 TGGTTAAATTTTATGAGGCTTGACTTC 58.696 33.333 0.00 0.00 0.00 3.01
558 559 8.189119 TGGTTAAATTTTATGAGGCTTGACTT 57.811 30.769 0.00 0.00 0.00 3.01
559 560 7.775053 TGGTTAAATTTTATGAGGCTTGACT 57.225 32.000 0.00 0.00 0.00 3.41
560 561 9.435688 AATTGGTTAAATTTTATGAGGCTTGAC 57.564 29.630 0.00 0.00 34.72 3.18
598 599 9.234827 TGATTTCAGATTGTGAATGTTGATACT 57.765 29.630 0.00 0.00 44.89 2.12
599 600 9.844790 TTGATTTCAGATTGTGAATGTTGATAC 57.155 29.630 0.00 0.00 44.89 2.24
614 615 9.770097 ACACGTCTATTGATATTGATTTCAGAT 57.230 29.630 0.00 0.00 0.00 2.90
615 616 9.249457 GACACGTCTATTGATATTGATTTCAGA 57.751 33.333 0.00 0.00 0.00 3.27
616 617 9.034544 TGACACGTCTATTGATATTGATTTCAG 57.965 33.333 0.00 0.00 0.00 3.02
617 618 8.940768 TGACACGTCTATTGATATTGATTTCA 57.059 30.769 0.00 0.00 0.00 2.69
618 619 9.803130 CATGACACGTCTATTGATATTGATTTC 57.197 33.333 0.00 0.00 0.00 2.17
619 620 9.546428 TCATGACACGTCTATTGATATTGATTT 57.454 29.630 0.00 0.00 0.00 2.17
620 621 8.982685 GTCATGACACGTCTATTGATATTGATT 58.017 33.333 21.07 0.00 0.00 2.57
621 622 8.363390 AGTCATGACACGTCTATTGATATTGAT 58.637 33.333 27.02 0.00 0.00 2.57
622 623 7.716612 AGTCATGACACGTCTATTGATATTGA 58.283 34.615 27.02 0.00 0.00 2.57
623 624 7.936950 AGTCATGACACGTCTATTGATATTG 57.063 36.000 27.02 0.00 0.00 1.90
626 627 9.516314 CTTTAAGTCATGACACGTCTATTGATA 57.484 33.333 27.02 0.08 0.00 2.15
627 628 8.035394 ACTTTAAGTCATGACACGTCTATTGAT 58.965 33.333 27.02 0.00 0.00 2.57
628 629 7.375834 ACTTTAAGTCATGACACGTCTATTGA 58.624 34.615 27.02 5.47 0.00 2.57
629 630 7.582435 ACTTTAAGTCATGACACGTCTATTG 57.418 36.000 27.02 10.22 0.00 1.90
630 631 8.603242 AAACTTTAAGTCATGACACGTCTATT 57.397 30.769 27.02 13.12 0.00 1.73
631 632 7.870954 TGAAACTTTAAGTCATGACACGTCTAT 59.129 33.333 27.02 7.36 0.00 1.98
632 633 7.204604 TGAAACTTTAAGTCATGACACGTCTA 58.795 34.615 27.02 7.86 0.00 2.59
633 634 6.046593 TGAAACTTTAAGTCATGACACGTCT 58.953 36.000 27.02 3.53 0.00 4.18
634 635 6.281848 TGAAACTTTAAGTCATGACACGTC 57.718 37.500 27.02 12.38 0.00 4.34
635 636 6.861065 ATGAAACTTTAAGTCATGACACGT 57.139 33.333 27.02 14.18 30.84 4.49
636 637 9.265938 CAATATGAAACTTTAAGTCATGACACG 57.734 33.333 27.02 12.29 34.01 4.49
654 655 9.348476 TGCCATGCTAAAGTTATACAATATGAA 57.652 29.630 0.00 0.00 0.00 2.57
655 656 8.916628 TGCCATGCTAAAGTTATACAATATGA 57.083 30.769 0.00 0.00 0.00 2.15
656 657 9.002600 TCTGCCATGCTAAAGTTATACAATATG 57.997 33.333 0.00 0.00 0.00 1.78
657 658 9.745018 ATCTGCCATGCTAAAGTTATACAATAT 57.255 29.630 0.00 0.00 0.00 1.28
658 659 9.002600 CATCTGCCATGCTAAAGTTATACAATA 57.997 33.333 0.00 0.00 0.00 1.90
659 660 7.503566 ACATCTGCCATGCTAAAGTTATACAAT 59.496 33.333 0.00 0.00 0.00 2.71
660 661 6.828273 ACATCTGCCATGCTAAAGTTATACAA 59.172 34.615 0.00 0.00 0.00 2.41
661 662 6.356556 ACATCTGCCATGCTAAAGTTATACA 58.643 36.000 0.00 0.00 0.00 2.29
662 663 6.867662 ACATCTGCCATGCTAAAGTTATAC 57.132 37.500 0.00 0.00 0.00 1.47
663 664 7.053498 TCAACATCTGCCATGCTAAAGTTATA 58.947 34.615 0.00 0.00 0.00 0.98
664 665 5.887598 TCAACATCTGCCATGCTAAAGTTAT 59.112 36.000 0.00 0.00 0.00 1.89
665 666 5.252547 TCAACATCTGCCATGCTAAAGTTA 58.747 37.500 0.00 0.00 0.00 2.24
666 667 4.081406 TCAACATCTGCCATGCTAAAGTT 58.919 39.130 0.00 0.00 0.00 2.66
667 668 3.689347 TCAACATCTGCCATGCTAAAGT 58.311 40.909 0.00 0.00 0.00 2.66
668 669 4.913335 ATCAACATCTGCCATGCTAAAG 57.087 40.909 0.00 0.00 0.00 1.85
669 670 6.964807 AATATCAACATCTGCCATGCTAAA 57.035 33.333 0.00 0.00 0.00 1.85
670 671 6.964807 AAATATCAACATCTGCCATGCTAA 57.035 33.333 0.00 0.00 0.00 3.09
671 672 6.964807 AAAATATCAACATCTGCCATGCTA 57.035 33.333 0.00 0.00 0.00 3.49
672 673 5.864418 AAAATATCAACATCTGCCATGCT 57.136 34.783 0.00 0.00 0.00 3.79
700 701 9.974980 AACTTCACAAAATTTGACCGTATTTAT 57.025 25.926 13.19 0.00 0.00 1.40
701 702 9.804758 AAACTTCACAAAATTTGACCGTATTTA 57.195 25.926 13.19 0.00 0.00 1.40
702 703 8.599774 CAAACTTCACAAAATTTGACCGTATTT 58.400 29.630 13.19 3.38 34.62 1.40
703 704 7.976734 TCAAACTTCACAAAATTTGACCGTATT 59.023 29.630 13.19 0.00 36.42 1.89
704 705 7.484975 TCAAACTTCACAAAATTTGACCGTAT 58.515 30.769 13.19 0.00 36.42 3.06
705 706 6.853720 TCAAACTTCACAAAATTTGACCGTA 58.146 32.000 13.19 0.00 36.42 4.02
706 707 5.715070 TCAAACTTCACAAAATTTGACCGT 58.285 33.333 13.19 1.42 36.42 4.83
724 725 9.928236 GCATATTAGAATTCTCTGAAGTCAAAC 57.072 33.333 12.24 0.00 32.70 2.93
725 726 9.671279 TGCATATTAGAATTCTCTGAAGTCAAA 57.329 29.630 12.24 0.00 32.70 2.69
726 727 9.322773 CTGCATATTAGAATTCTCTGAAGTCAA 57.677 33.333 12.24 0.00 32.70 3.18
727 728 8.699130 TCTGCATATTAGAATTCTCTGAAGTCA 58.301 33.333 12.24 3.02 32.70 3.41
728 729 9.195411 CTCTGCATATTAGAATTCTCTGAAGTC 57.805 37.037 12.24 0.25 32.70 3.01
729 730 8.703743 ACTCTGCATATTAGAATTCTCTGAAGT 58.296 33.333 12.24 7.56 32.70 3.01
739 740 9.343539 GGTCCTTTTTACTCTGCATATTAGAAT 57.656 33.333 0.00 0.00 0.00 2.40
740 741 7.494625 CGGTCCTTTTTACTCTGCATATTAGAA 59.505 37.037 0.00 0.00 0.00 2.10
741 742 6.984474 CGGTCCTTTTTACTCTGCATATTAGA 59.016 38.462 0.00 0.00 0.00 2.10
742 743 6.202954 CCGGTCCTTTTTACTCTGCATATTAG 59.797 42.308 0.00 0.00 0.00 1.73
743 744 6.053005 CCGGTCCTTTTTACTCTGCATATTA 58.947 40.000 0.00 0.00 0.00 0.98
744 745 4.881850 CCGGTCCTTTTTACTCTGCATATT 59.118 41.667 0.00 0.00 0.00 1.28
745 746 4.163458 TCCGGTCCTTTTTACTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
746 747 3.516300 TCCGGTCCTTTTTACTCTGCATA 59.484 43.478 0.00 0.00 0.00 3.14
747 748 2.304761 TCCGGTCCTTTTTACTCTGCAT 59.695 45.455 0.00 0.00 0.00 3.96
748 749 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
749 750 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
750 751 2.354805 CCCTCCGGTCCTTTTTACTCTG 60.355 54.545 0.00 0.00 0.00 3.35
751 752 1.907255 CCCTCCGGTCCTTTTTACTCT 59.093 52.381 0.00 0.00 0.00 3.24
752 753 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
753 754 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
754 755 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
755 756 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
756 757 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
757 758 1.907255 CTTACTCCCTCCGGTCCTTTT 59.093 52.381 0.00 0.00 0.00 2.27
758 759 1.203275 ACTTACTCCCTCCGGTCCTTT 60.203 52.381 0.00 0.00 0.00 3.11
759 760 0.412640 ACTTACTCCCTCCGGTCCTT 59.587 55.000 0.00 0.00 0.00 3.36
760 761 0.033306 GACTTACTCCCTCCGGTCCT 60.033 60.000 0.00 0.00 0.00 3.85
761 762 1.042003 GGACTTACTCCCTCCGGTCC 61.042 65.000 0.00 0.00 36.83 4.46
762 763 0.033306 AGGACTTACTCCCTCCGGTC 60.033 60.000 0.00 0.00 40.53 4.79
763 764 0.324460 CAGGACTTACTCCCTCCGGT 60.324 60.000 0.00 0.00 40.53 5.28
764 765 1.677637 GCAGGACTTACTCCCTCCGG 61.678 65.000 0.00 0.00 40.53 5.14
765 766 1.817209 GCAGGACTTACTCCCTCCG 59.183 63.158 0.00 0.00 40.53 4.63
766 767 1.817209 CGCAGGACTTACTCCCTCC 59.183 63.158 0.00 0.00 40.53 4.30
767 768 1.142097 GCGCAGGACTTACTCCCTC 59.858 63.158 0.30 0.00 40.53 4.30
768 769 0.033405 TAGCGCAGGACTTACTCCCT 60.033 55.000 11.47 0.00 40.53 4.20
769 770 0.102663 GTAGCGCAGGACTTACTCCC 59.897 60.000 11.47 0.00 40.53 4.30
770 771 1.104630 AGTAGCGCAGGACTTACTCC 58.895 55.000 11.47 0.00 39.81 3.85
771 772 2.944349 AGTAGTAGCGCAGGACTTACTC 59.056 50.000 11.47 2.38 0.00 2.59
777 778 2.681848 TCACTTAGTAGTAGCGCAGGAC 59.318 50.000 11.47 4.33 31.96 3.85
811 812 2.585247 GCGTGGGTGTATCGCCTC 60.585 66.667 0.00 0.00 43.41 4.70
851 852 1.525077 GGTCACTTGGCACGTGGAA 60.525 57.895 22.00 2.99 33.31 3.53
857 1656 4.846779 TTTTTATCTGGTCACTTGGCAC 57.153 40.909 0.00 0.00 0.00 5.01
925 1747 4.465446 TGGGGGAGAGGAGCTCGG 62.465 72.222 7.83 0.00 44.91 4.63
1027 1853 1.617181 ATCTGGATGGAGGGGAGGGT 61.617 60.000 0.00 0.00 0.00 4.34
1076 1903 3.546543 CGCCCGAATCCCTAGCCA 61.547 66.667 0.00 0.00 0.00 4.75
1112 1939 3.311110 GGCCGACCTGTCCACTCA 61.311 66.667 0.00 0.00 0.00 3.41
1118 1945 4.208686 CTAGCGGGCCGACCTGTC 62.209 72.222 33.44 10.96 45.10 3.51
1298 2125 1.745489 GGATGACAACGCCTCACCC 60.745 63.158 0.00 0.00 0.00 4.61
1387 2232 3.181451 TGGCATAGCTAGCTGCATTACTT 60.181 43.478 27.68 0.00 45.94 2.24
1396 2241 0.531532 CGCACTTGGCATAGCTAGCT 60.532 55.000 23.12 23.12 45.17 3.32
1423 2268 4.808558 TGGCTGTTGCACTTATGAAAATC 58.191 39.130 0.00 0.00 41.91 2.17
1493 2338 8.624776 ACACTAGTACTACACCGAATTATAACC 58.375 37.037 0.00 0.00 0.00 2.85
1500 2345 6.825213 TGTCATACACTAGTACTACACCGAAT 59.175 38.462 0.00 0.00 31.96 3.34
1504 2349 7.596494 TGTTTGTCATACACTAGTACTACACC 58.404 38.462 0.00 0.00 31.58 4.16
1505 2350 9.467258 TTTGTTTGTCATACACTAGTACTACAC 57.533 33.333 0.00 0.00 31.58 2.90
1556 2403 7.389053 ACTGAACTTGACATTCCTGAACTAATC 59.611 37.037 0.00 0.00 0.00 1.75
1567 2414 6.255215 TGAACGAAAACTGAACTTGACATTC 58.745 36.000 0.00 0.00 0.00 2.67
1624 2477 7.707464 TGCAACATAGGCATGAATAGAAAATTG 59.293 33.333 0.00 0.00 36.11 2.32
1688 2541 1.301401 CGGAACCGACTGCTCCAAA 60.301 57.895 7.53 0.00 42.83 3.28
1713 2566 3.087031 CCTTCCCAGTCACGAGTAGTAA 58.913 50.000 0.00 0.00 0.00 2.24
1846 2715 0.661552 CTGGGAAGCTGAATCGCATG 59.338 55.000 4.32 0.00 38.79 4.06
1883 2758 7.479980 TGCAGCATTGTAGTTGGTATTATTTC 58.520 34.615 0.00 0.00 0.00 2.17
2031 2923 6.258160 GTTGTTGCTTGTAATGCTATACAGG 58.742 40.000 7.06 7.06 37.13 4.00
2300 3879 8.213679 CCAGTAAATCTAATCCTTGATTCCTCA 58.786 37.037 0.00 0.00 33.95 3.86
2486 4433 2.899303 TTGGAAGGAAATGGGGAGTC 57.101 50.000 0.00 0.00 0.00 3.36
2492 4439 5.650543 CGGTCTTAAATTGGAAGGAAATGG 58.349 41.667 1.60 0.00 0.00 3.16
2798 4753 5.451354 ACCAACATTGTACCCTTTACTGTT 58.549 37.500 0.00 0.00 0.00 3.16
2831 4786 1.000060 GCAAGAAGGCATCAGCAACAA 60.000 47.619 2.93 0.00 44.61 2.83
2904 4871 4.032960 TCCAAGCTTCTGAGGCAAATTA 57.967 40.909 14.45 0.00 0.00 1.40
2916 4883 7.982761 ATCATAGATTCTGAATCCAAGCTTC 57.017 36.000 23.12 1.52 38.71 3.86
2938 4905 5.376625 TGGTAGGCATGACCAAATCTTATC 58.623 41.667 0.00 0.00 44.08 1.75
2959 4926 5.186198 CCCAACTTAAGAAGGATACAGTGG 58.814 45.833 10.09 1.10 41.41 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.