Multiple sequence alignment - TraesCS2A01G307700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G307700 chr2A 100.000 6572 0 0 1 6572 528664720 528658149 0.000000e+00 12137.0
1 TraesCS2A01G307700 chr2A 98.084 261 5 0 2763 3023 103588383 103588123 7.770000e-124 455.0
2 TraesCS2A01G307700 chr2A 96.935 261 7 1 2763 3023 511648244 511648503 2.810000e-118 436.0
3 TraesCS2A01G307700 chr2A 98.276 58 1 0 1 58 383659184 383659241 1.170000e-17 102.0
4 TraesCS2A01G307700 chr2D 95.539 3183 69 26 3021 6150 391722682 391719520 0.000000e+00 5024.0
5 TraesCS2A01G307700 chr2D 93.771 2713 120 26 56 2764 391725347 391722680 0.000000e+00 4028.0
6 TraesCS2A01G307700 chr2D 90.145 345 14 7 6238 6572 391717860 391717526 1.310000e-116 431.0
7 TraesCS2A01G307700 chr2D 90.717 237 12 3 6151 6381 391719421 391719189 2.300000e-79 307.0
8 TraesCS2A01G307700 chr2B 95.080 1931 77 10 839 2764 463286493 463284576 0.000000e+00 3024.0
9 TraesCS2A01G307700 chr2B 89.822 2250 121 45 3570 5755 463283916 463281711 0.000000e+00 2787.0
10 TraesCS2A01G307700 chr2B 92.196 551 23 5 3021 3568 463284578 463284045 0.000000e+00 761.0
11 TraesCS2A01G307700 chr2B 86.099 705 45 28 5890 6566 463281628 463280949 0.000000e+00 710.0
12 TraesCS2A01G307700 chr2B 87.500 576 59 5 56 631 463287399 463286837 0.000000e+00 652.0
13 TraesCS2A01G307700 chrUn 100.000 411 0 0 3930 4340 477664818 477665228 0.000000e+00 760.0
14 TraesCS2A01G307700 chr4A 99.621 264 1 0 2760 3023 104373317 104373054 3.560000e-132 483.0
15 TraesCS2A01G307700 chr4A 95.880 267 9 2 2762 3027 943716 943451 1.310000e-116 431.0
16 TraesCS2A01G307700 chr4A 93.846 65 2 2 1 65 369772501 369772563 5.420000e-16 97.1
17 TraesCS2A01G307700 chr6A 99.234 261 2 0 2763 3023 115182558 115182298 7.710000e-129 472.0
18 TraesCS2A01G307700 chr3B 97.701 261 6 0 2763 3023 811005366 811005626 3.610000e-122 449.0
19 TraesCS2A01G307700 chr5D 97.338 263 7 0 2761 3023 209854666 209854928 1.300000e-121 448.0
20 TraesCS2A01G307700 chr5D 93.846 65 2 2 1 64 189322162 189322099 5.420000e-16 97.1
21 TraesCS2A01G307700 chr3A 96.255 267 10 0 2761 3027 564425093 564424827 7.820000e-119 438.0
22 TraesCS2A01G307700 chr3A 92.647 68 4 1 1 67 487156948 487156881 5.420000e-16 97.1
23 TraesCS2A01G307700 chr3A 81.633 98 13 3 393 485 51296091 51295994 7.070000e-10 76.8
24 TraesCS2A01G307700 chr1A 96.212 264 8 1 2761 3024 454738799 454739060 1.310000e-116 431.0
25 TraesCS2A01G307700 chr5A 88.506 87 7 3 1 85 590021260 590021345 1.170000e-17 102.0
26 TraesCS2A01G307700 chr5A 93.939 66 2 2 1 66 676124265 676124328 1.510000e-16 99.0
27 TraesCS2A01G307700 chr5A 87.356 87 8 3 1 85 589925327 589925412 5.420000e-16 97.1
28 TraesCS2A01G307700 chr3D 96.774 62 1 1 1 62 512861087 512861027 1.170000e-17 102.0
29 TraesCS2A01G307700 chr3D 92.593 54 3 1 393 446 39545786 39545734 7.070000e-10 76.8
30 TraesCS2A01G307700 chr1B 96.364 55 2 0 1 55 452003072 452003126 2.520000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G307700 chr2A 528658149 528664720 6571 True 12137.0 12137 100.0000 1 6572 1 chr2A.!!$R2 6571
1 TraesCS2A01G307700 chr2D 391717526 391725347 7821 True 2447.5 5024 92.5430 56 6572 4 chr2D.!!$R1 6516
2 TraesCS2A01G307700 chr2B 463280949 463287399 6450 True 1586.8 3024 90.1394 56 6566 5 chr2B.!!$R1 6510

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 774 0.248825 CTCTCGGATGCTTGTCCTCG 60.249 60.000 2.67 0.0 36.07 4.63 F
798 801 0.802607 GTGCGCTAAGACTTCCCGAG 60.803 60.000 9.73 0.0 0.00 4.63 F
2028 2203 1.196808 GTGATTACACACGCTGTTGGG 59.803 52.381 0.00 0.0 45.32 4.12 F
2778 2956 0.115745 TTGTACTCCCTCCGGTCCTT 59.884 55.000 0.00 0.0 0.00 3.36 F
2779 2957 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.000 0.00 0.0 0.00 3.11 F
2818 2996 1.040646 TGTCTGAAGTCAAGGCTCGT 58.959 50.000 0.00 0.0 0.00 4.18 F
4467 4790 1.207791 AATGTGTGCCTAGAGAGGGG 58.792 55.000 0.00 0.0 43.97 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2769 2947 1.070445 TGCGAACTAAAAAGGACCGGA 59.930 47.619 9.46 0.00 0.00 5.14 R
2770 2948 1.515081 TGCGAACTAAAAAGGACCGG 58.485 50.000 0.00 0.00 0.00 5.28 R
3118 3297 0.250553 TGCTTTGGGGGTTCAGTACG 60.251 55.000 0.00 0.00 0.00 3.67 R
4549 4873 3.105187 TGGCATGACCATCTGATGC 57.895 52.632 12.17 1.09 46.36 3.91 R
4635 4959 6.318144 GTGACATCTGATGTGGAATCAAAGAT 59.682 38.462 26.71 0.00 45.03 2.40 R
4875 5199 2.234143 GGAGGGGAAATGCATTAGCTC 58.766 52.381 13.39 7.93 42.74 4.09 R
6497 8475 0.178967 TCATCAAAGCCCCTTGCACA 60.179 50.000 0.00 0.00 44.83 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 7.891561 AGTCTATCATCACTAATAAGTCAGGC 58.108 38.462 0.00 0.00 31.97 4.85
48 49 7.728083 AGTCTATCATCACTAATAAGTCAGGCT 59.272 37.037 0.00 0.00 31.97 4.58
49 50 9.015367 GTCTATCATCACTAATAAGTCAGGCTA 57.985 37.037 0.00 0.00 31.97 3.93
50 51 9.760926 TCTATCATCACTAATAAGTCAGGCTAT 57.239 33.333 0.00 0.00 31.97 2.97
52 53 7.839680 TCATCACTAATAAGTCAGGCTATCA 57.160 36.000 0.00 0.00 31.97 2.15
53 54 7.661968 TCATCACTAATAAGTCAGGCTATCAC 58.338 38.462 0.00 0.00 31.97 3.06
54 55 7.287696 TCATCACTAATAAGTCAGGCTATCACA 59.712 37.037 0.00 0.00 31.97 3.58
103 104 4.211125 TCAAGAGCTACCATACTGAGAGG 58.789 47.826 0.00 0.00 0.00 3.69
121 122 2.296190 GAGGAAACTTGGGCATTCGTTT 59.704 45.455 0.00 0.00 44.43 3.60
158 159 6.403527 CGAAGACAAAGGTGATGCATTCATTA 60.404 38.462 0.00 0.00 36.54 1.90
160 161 7.414222 AGACAAAGGTGATGCATTCATTATT 57.586 32.000 0.00 0.00 36.54 1.40
176 177 2.851263 TATTGTGGGAGCAGTCGTTT 57.149 45.000 0.00 0.00 0.00 3.60
177 178 1.523758 ATTGTGGGAGCAGTCGTTTC 58.476 50.000 0.00 0.00 0.00 2.78
179 180 0.468226 TGTGGGAGCAGTCGTTTCTT 59.532 50.000 0.00 0.00 0.00 2.52
193 194 4.334481 GTCGTTTCTTCCAACCTTTTCAGA 59.666 41.667 0.00 0.00 0.00 3.27
203 204 4.637977 CCAACCTTTTCAGAGGAGATTAGC 59.362 45.833 0.00 0.00 39.25 3.09
240 241 5.753438 GTGTGAACTTGAGTGTACATCTTCA 59.247 40.000 0.00 1.09 30.89 3.02
257 258 1.737838 TCATCACCATCACTTTCGGC 58.262 50.000 0.00 0.00 0.00 5.54
315 316 1.959042 CTTGTCTGTTGCCTCTGTGT 58.041 50.000 0.00 0.00 0.00 3.72
379 380 8.833231 TCACTTAGCTGCATATCTAAATAACC 57.167 34.615 1.02 0.00 0.00 2.85
380 381 7.878127 TCACTTAGCTGCATATCTAAATAACCC 59.122 37.037 1.02 0.00 0.00 4.11
455 456 2.442126 TCGCCTATCCACTCTCCTCTAA 59.558 50.000 0.00 0.00 0.00 2.10
468 469 7.395772 CCACTCTCCTCTAATTGATATCTAGCA 59.604 40.741 3.98 0.00 0.00 3.49
505 506 3.066760 CAGTTTTTCTTTCTCGCAAGGGT 59.933 43.478 0.00 0.00 40.39 4.34
522 523 0.665835 GGTGGTGTTTGTGCGAATGA 59.334 50.000 0.00 0.00 0.00 2.57
525 526 1.952990 TGGTGTTTGTGCGAATGACAT 59.047 42.857 0.00 0.00 0.00 3.06
553 554 0.319555 CTTCGAGTTGGCCGTTCAGA 60.320 55.000 0.00 0.00 0.00 3.27
555 556 2.027625 CGAGTTGGCCGTTCAGACC 61.028 63.158 0.00 0.00 0.00 3.85
581 582 1.186200 CTCCTCAAGGTCGTCCATCA 58.814 55.000 0.51 0.00 36.34 3.07
600 601 4.436998 CACGGAGTCGGTGGAGCC 62.437 72.222 20.13 0.00 41.61 4.70
615 616 3.547513 GCCCCGGCGTAGATTCCT 61.548 66.667 6.01 0.00 0.00 3.36
616 617 2.205152 GCCCCGGCGTAGATTCCTA 61.205 63.158 6.01 0.00 0.00 2.94
617 618 1.965219 CCCCGGCGTAGATTCCTAG 59.035 63.158 6.01 0.00 0.00 3.02
618 619 0.826672 CCCCGGCGTAGATTCCTAGT 60.827 60.000 6.01 0.00 0.00 2.57
619 620 0.314302 CCCGGCGTAGATTCCTAGTG 59.686 60.000 6.01 0.00 0.00 2.74
620 621 1.030457 CCGGCGTAGATTCCTAGTGT 58.970 55.000 6.01 0.00 0.00 3.55
621 622 1.001597 CCGGCGTAGATTCCTAGTGTC 60.002 57.143 6.01 0.00 0.00 3.67
622 623 1.948145 CGGCGTAGATTCCTAGTGTCT 59.052 52.381 0.00 0.00 0.00 3.41
623 624 2.358267 CGGCGTAGATTCCTAGTGTCTT 59.642 50.000 0.00 0.00 0.00 3.01
624 625 3.181489 CGGCGTAGATTCCTAGTGTCTTT 60.181 47.826 0.00 0.00 0.00 2.52
625 626 4.677250 CGGCGTAGATTCCTAGTGTCTTTT 60.677 45.833 0.00 0.00 0.00 2.27
626 627 5.176592 GGCGTAGATTCCTAGTGTCTTTTT 58.823 41.667 0.00 0.00 0.00 1.94
627 628 6.335777 GGCGTAGATTCCTAGTGTCTTTTTA 58.664 40.000 0.00 0.00 0.00 1.52
628 629 6.476053 GGCGTAGATTCCTAGTGTCTTTTTAG 59.524 42.308 0.00 0.00 0.00 1.85
629 630 6.476053 GCGTAGATTCCTAGTGTCTTTTTAGG 59.524 42.308 0.00 0.00 36.18 2.69
630 631 6.979238 CGTAGATTCCTAGTGTCTTTTTAGGG 59.021 42.308 0.00 0.00 35.67 3.53
631 632 5.746284 AGATTCCTAGTGTCTTTTTAGGGC 58.254 41.667 0.00 0.00 35.67 5.19
632 633 3.604875 TCCTAGTGTCTTTTTAGGGCG 57.395 47.619 0.00 0.00 35.67 6.13
633 634 2.007608 CCTAGTGTCTTTTTAGGGCGC 58.992 52.381 0.00 0.00 32.13 6.53
676 678 2.960129 GCGCCGACGATGTTAGGG 60.960 66.667 0.00 0.00 43.93 3.53
682 684 2.268298 CCGACGATGTTAGGGTTTCTG 58.732 52.381 0.00 0.00 0.00 3.02
684 686 2.007608 GACGATGTTAGGGTTTCTGGC 58.992 52.381 0.00 0.00 0.00 4.85
685 687 1.349688 ACGATGTTAGGGTTTCTGGCA 59.650 47.619 0.00 0.00 0.00 4.92
689 691 1.771854 TGTTAGGGTTTCTGGCAGTGA 59.228 47.619 15.27 1.56 0.00 3.41
701 703 2.050077 CAGTGAGTGTGCGCGAGA 60.050 61.111 12.10 0.00 0.00 4.04
750 753 2.557924 GGGTTCAATGACAATGACTGCA 59.442 45.455 0.00 0.00 0.00 4.41
756 759 4.874396 TCAATGACAATGACTGCATCTCTC 59.126 41.667 0.00 0.00 32.35 3.20
760 763 2.433604 ACAATGACTGCATCTCTCGGAT 59.566 45.455 0.00 0.00 32.35 4.18
771 774 0.248825 CTCTCGGATGCTTGTCCTCG 60.249 60.000 2.67 0.00 36.07 4.63
772 775 0.965866 TCTCGGATGCTTGTCCTCGT 60.966 55.000 2.67 0.00 36.07 4.18
798 801 0.802607 GTGCGCTAAGACTTCCCGAG 60.803 60.000 9.73 0.00 0.00 4.63
803 806 1.467713 GCTAAGACTTCCCGAGTGTCG 60.468 57.143 0.00 0.00 39.19 4.35
817 954 3.910170 CGAGTGTCGTCGACAAGATAAAA 59.090 43.478 28.48 1.47 44.49 1.52
823 960 8.380644 AGTGTCGTCGACAAGATAAAATTTATG 58.619 33.333 28.48 0.00 44.49 1.90
933 1102 6.082338 CAGAGACGATTTTCAAAATCCTGTG 58.918 40.000 15.82 12.57 0.00 3.66
946 1115 1.374758 CCTGTGAGAGGAACACGGC 60.375 63.158 0.00 0.00 46.33 5.68
961 1130 5.862860 GGAACACGGCGGATTTAAAATAAAA 59.137 36.000 13.24 0.00 0.00 1.52
996 1165 1.482593 AGATCTTGTCACATCCGACCC 59.517 52.381 0.00 0.00 34.88 4.46
1487 1662 4.497473 GCCAATGTTAGCGGCATATTTA 57.503 40.909 1.45 0.00 45.52 1.40
1490 1665 5.572896 GCCAATGTTAGCGGCATATTTATTC 59.427 40.000 1.45 0.00 45.52 1.75
1491 1666 6.570378 GCCAATGTTAGCGGCATATTTATTCT 60.570 38.462 1.45 0.00 45.52 2.40
1492 1667 7.370383 CCAATGTTAGCGGCATATTTATTCTT 58.630 34.615 1.45 0.00 0.00 2.52
1493 1668 7.326789 CCAATGTTAGCGGCATATTTATTCTTG 59.673 37.037 1.45 0.00 0.00 3.02
1617 1792 2.682494 TACCACCCGCCTCCTCAC 60.682 66.667 0.00 0.00 0.00 3.51
1801 1976 8.145122 CCCTCTATAGTTCAGTTTCCAAGTATC 58.855 40.741 0.00 0.00 0.00 2.24
1906 2081 2.429610 GCCTCCATCTGATGCAAATTGT 59.570 45.455 12.17 0.00 34.99 2.71
1980 2155 3.869526 GCTTGCCAGCCCAATAAATTTGT 60.870 43.478 0.00 0.00 40.61 2.83
2028 2203 1.196808 GTGATTACACACGCTGTTGGG 59.803 52.381 0.00 0.00 45.32 4.12
2044 2219 4.211125 TGTTGGGTGCAACTTTCTGATTA 58.789 39.130 0.00 0.00 36.74 1.75
2155 2331 7.730364 TCTGTCCTTCAATGTTTTCTCTAAC 57.270 36.000 0.00 0.00 0.00 2.34
2211 2387 8.521170 TCTGAGTATTTAGTGTGTACTGCTAT 57.479 34.615 0.00 0.00 37.78 2.97
2443 2620 9.939802 GTATGACCTTAAGGGATACGATAAAAT 57.060 33.333 25.31 0.00 40.27 1.82
2751 2929 5.804473 TGTGCAATTGTAATATTTTCTGCCG 59.196 36.000 7.40 0.00 0.00 5.69
2761 2939 9.781834 TGTAATATTTTCTGCCGTTAAAGATTG 57.218 29.630 0.00 0.00 28.96 2.67
2762 2940 9.783256 GTAATATTTTCTGCCGTTAAAGATTGT 57.217 29.630 0.00 0.00 28.96 2.71
2764 2942 9.783256 AATATTTTCTGCCGTTAAAGATTGTAC 57.217 29.630 0.00 0.00 0.00 2.90
2765 2943 6.870971 TTTTCTGCCGTTAAAGATTGTACT 57.129 33.333 0.00 0.00 0.00 2.73
2766 2944 6.476243 TTTCTGCCGTTAAAGATTGTACTC 57.524 37.500 0.00 0.00 0.00 2.59
2767 2945 4.501071 TCTGCCGTTAAAGATTGTACTCC 58.499 43.478 0.00 0.00 0.00 3.85
2768 2946 3.602483 TGCCGTTAAAGATTGTACTCCC 58.398 45.455 0.00 0.00 0.00 4.30
2769 2947 3.262405 TGCCGTTAAAGATTGTACTCCCT 59.738 43.478 0.00 0.00 0.00 4.20
2770 2948 3.869832 GCCGTTAAAGATTGTACTCCCTC 59.130 47.826 0.00 0.00 0.00 4.30
2771 2949 4.439968 CCGTTAAAGATTGTACTCCCTCC 58.560 47.826 0.00 0.00 0.00 4.30
2772 2950 4.110482 CGTTAAAGATTGTACTCCCTCCG 58.890 47.826 0.00 0.00 0.00 4.63
2773 2951 4.439968 GTTAAAGATTGTACTCCCTCCGG 58.560 47.826 0.00 0.00 0.00 5.14
2774 2952 2.249309 AAGATTGTACTCCCTCCGGT 57.751 50.000 0.00 0.00 0.00 5.28
2775 2953 1.777941 AGATTGTACTCCCTCCGGTC 58.222 55.000 0.00 0.00 0.00 4.79
2776 2954 0.751452 GATTGTACTCCCTCCGGTCC 59.249 60.000 0.00 0.00 0.00 4.46
2777 2955 0.338814 ATTGTACTCCCTCCGGTCCT 59.661 55.000 0.00 0.00 0.00 3.85
2778 2956 0.115745 TTGTACTCCCTCCGGTCCTT 59.884 55.000 0.00 0.00 0.00 3.36
2779 2957 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.000 0.00 0.00 0.00 3.11
2780 2958 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
2781 2959 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
2782 2960 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
2783 2961 1.907255 ACTCCCTCCGGTCCTTTTTAG 59.093 52.381 0.00 0.00 0.00 1.85
2784 2962 1.907255 CTCCCTCCGGTCCTTTTTAGT 59.093 52.381 0.00 0.00 0.00 2.24
2785 2963 2.305052 CTCCCTCCGGTCCTTTTTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
2786 2964 2.303890 TCCCTCCGGTCCTTTTTAGTTC 59.696 50.000 0.00 0.00 0.00 3.01
2787 2965 2.344025 CCTCCGGTCCTTTTTAGTTCG 58.656 52.381 0.00 0.00 0.00 3.95
2788 2966 1.730612 CTCCGGTCCTTTTTAGTTCGC 59.269 52.381 0.00 0.00 0.00 4.70
2789 2967 1.070445 TCCGGTCCTTTTTAGTTCGCA 59.930 47.619 0.00 0.00 0.00 5.10
2790 2968 2.081462 CCGGTCCTTTTTAGTTCGCAT 58.919 47.619 0.00 0.00 0.00 4.73
2791 2969 3.055963 TCCGGTCCTTTTTAGTTCGCATA 60.056 43.478 0.00 0.00 0.00 3.14
2792 2970 3.875134 CCGGTCCTTTTTAGTTCGCATAT 59.125 43.478 0.00 0.00 0.00 1.78
2793 2971 4.334481 CCGGTCCTTTTTAGTTCGCATATT 59.666 41.667 0.00 0.00 0.00 1.28
2794 2972 5.524646 CCGGTCCTTTTTAGTTCGCATATTA 59.475 40.000 0.00 0.00 0.00 0.98
2795 2973 6.292703 CCGGTCCTTTTTAGTTCGCATATTAG 60.293 42.308 0.00 0.00 0.00 1.73
2796 2974 6.477688 CGGTCCTTTTTAGTTCGCATATTAGA 59.522 38.462 0.00 0.00 0.00 2.10
2797 2975 7.170998 CGGTCCTTTTTAGTTCGCATATTAGAT 59.829 37.037 0.00 0.00 0.00 1.98
2798 2976 8.837389 GGTCCTTTTTAGTTCGCATATTAGATT 58.163 33.333 0.00 0.00 0.00 2.40
2805 2983 9.594478 TTTAGTTCGCATATTAGATTTGTCTGA 57.406 29.630 0.00 0.00 0.00 3.27
2806 2984 9.594478 TTAGTTCGCATATTAGATTTGTCTGAA 57.406 29.630 0.00 0.00 0.00 3.02
2807 2985 8.136057 AGTTCGCATATTAGATTTGTCTGAAG 57.864 34.615 0.00 0.00 0.00 3.02
2808 2986 7.766278 AGTTCGCATATTAGATTTGTCTGAAGT 59.234 33.333 0.00 0.00 0.00 3.01
2809 2987 7.700322 TCGCATATTAGATTTGTCTGAAGTC 57.300 36.000 0.00 0.00 0.00 3.01
2810 2988 7.264947 TCGCATATTAGATTTGTCTGAAGTCA 58.735 34.615 0.00 0.00 0.00 3.41
2811 2989 7.763985 TCGCATATTAGATTTGTCTGAAGTCAA 59.236 33.333 0.00 0.00 0.00 3.18
2812 2990 8.060679 CGCATATTAGATTTGTCTGAAGTCAAG 58.939 37.037 0.00 0.00 0.00 3.02
2813 2991 8.341173 GCATATTAGATTTGTCTGAAGTCAAGG 58.659 37.037 0.00 0.00 0.00 3.61
2814 2992 6.749923 ATTAGATTTGTCTGAAGTCAAGGC 57.250 37.500 0.00 0.00 0.00 4.35
2815 2993 4.363991 AGATTTGTCTGAAGTCAAGGCT 57.636 40.909 0.00 0.00 0.00 4.58
2816 2994 4.322567 AGATTTGTCTGAAGTCAAGGCTC 58.677 43.478 0.00 0.00 0.00 4.70
2817 2995 2.154854 TTGTCTGAAGTCAAGGCTCG 57.845 50.000 0.00 0.00 0.00 5.03
2818 2996 1.040646 TGTCTGAAGTCAAGGCTCGT 58.959 50.000 0.00 0.00 0.00 4.18
2819 2997 2.235891 TGTCTGAAGTCAAGGCTCGTA 58.764 47.619 0.00 0.00 0.00 3.43
2820 2998 2.626266 TGTCTGAAGTCAAGGCTCGTAA 59.374 45.455 0.00 0.00 0.00 3.18
2821 2999 3.069016 TGTCTGAAGTCAAGGCTCGTAAA 59.931 43.478 0.00 0.00 0.00 2.01
2822 3000 3.675698 GTCTGAAGTCAAGGCTCGTAAAG 59.324 47.826 0.00 0.00 0.00 1.85
2823 3001 3.321111 TCTGAAGTCAAGGCTCGTAAAGT 59.679 43.478 0.00 0.00 0.00 2.66
2824 3002 4.058817 CTGAAGTCAAGGCTCGTAAAGTT 58.941 43.478 0.00 0.00 0.00 2.66
2825 3003 4.448210 TGAAGTCAAGGCTCGTAAAGTTT 58.552 39.130 0.00 0.00 0.00 2.66
2826 3004 4.272504 TGAAGTCAAGGCTCGTAAAGTTTG 59.727 41.667 0.00 0.00 0.00 2.93
2827 3005 4.067972 AGTCAAGGCTCGTAAAGTTTGA 57.932 40.909 0.00 0.00 32.13 2.69
2828 3006 3.808174 AGTCAAGGCTCGTAAAGTTTGAC 59.192 43.478 0.00 6.98 43.95 3.18
2829 3007 3.059120 GTCAAGGCTCGTAAAGTTTGACC 60.059 47.826 0.00 0.00 41.18 4.02
2830 3008 2.875933 CAAGGCTCGTAAAGTTTGACCA 59.124 45.455 0.00 0.00 0.00 4.02
2831 3009 3.202829 AGGCTCGTAAAGTTTGACCAA 57.797 42.857 0.00 0.00 0.00 3.67
2832 3010 2.876550 AGGCTCGTAAAGTTTGACCAAC 59.123 45.455 0.00 0.00 35.32 3.77
2886 3064 7.930513 TGTGAAATCAATACTAGTAGATGCG 57.069 36.000 8.85 0.00 0.00 4.73
2887 3065 7.489160 TGTGAAATCAATACTAGTAGATGCGT 58.511 34.615 8.85 0.83 0.00 5.24
2888 3066 7.648112 TGTGAAATCAATACTAGTAGATGCGTC 59.352 37.037 8.85 0.00 0.00 5.19
2889 3067 7.648112 GTGAAATCAATACTAGTAGATGCGTCA 59.352 37.037 8.99 10.17 0.00 4.35
2890 3068 8.360390 TGAAATCAATACTAGTAGATGCGTCAT 58.640 33.333 8.99 0.00 0.00 3.06
2891 3069 8.526218 AAATCAATACTAGTAGATGCGTCATG 57.474 34.615 8.99 0.00 0.00 3.07
2892 3070 5.461526 TCAATACTAGTAGATGCGTCATGC 58.538 41.667 8.99 0.00 46.70 4.06
2893 3071 2.802787 ACTAGTAGATGCGTCATGCC 57.197 50.000 8.99 0.00 45.60 4.40
2894 3072 2.311463 ACTAGTAGATGCGTCATGCCT 58.689 47.619 8.99 0.66 45.60 4.75
2895 3073 2.695666 ACTAGTAGATGCGTCATGCCTT 59.304 45.455 8.99 0.00 45.60 4.35
2896 3074 3.889538 ACTAGTAGATGCGTCATGCCTTA 59.110 43.478 8.99 0.00 45.60 2.69
2897 3075 3.819564 AGTAGATGCGTCATGCCTTAA 57.180 42.857 8.99 0.00 45.60 1.85
2898 3076 4.137116 AGTAGATGCGTCATGCCTTAAA 57.863 40.909 8.99 0.00 45.60 1.52
2899 3077 4.122776 AGTAGATGCGTCATGCCTTAAAG 58.877 43.478 8.99 0.00 45.60 1.85
2900 3078 2.991250 AGATGCGTCATGCCTTAAAGT 58.009 42.857 8.99 0.00 45.60 2.66
2901 3079 3.347216 AGATGCGTCATGCCTTAAAGTT 58.653 40.909 8.99 0.00 45.60 2.66
2902 3080 3.758554 AGATGCGTCATGCCTTAAAGTTT 59.241 39.130 8.99 0.00 45.60 2.66
2903 3081 3.552604 TGCGTCATGCCTTAAAGTTTC 57.447 42.857 0.00 0.00 45.60 2.78
2904 3082 2.881513 TGCGTCATGCCTTAAAGTTTCA 59.118 40.909 0.00 0.00 45.60 2.69
2905 3083 3.505680 TGCGTCATGCCTTAAAGTTTCAT 59.494 39.130 0.00 0.00 45.60 2.57
2906 3084 3.853671 GCGTCATGCCTTAAAGTTTCATG 59.146 43.478 8.14 8.14 37.76 3.07
2907 3085 4.615912 GCGTCATGCCTTAAAGTTTCATGT 60.616 41.667 12.29 0.00 36.73 3.21
2908 3086 5.460646 CGTCATGCCTTAAAGTTTCATGTT 58.539 37.500 12.29 0.00 36.73 2.71
2909 3087 5.343058 CGTCATGCCTTAAAGTTTCATGTTG 59.657 40.000 12.29 5.48 36.73 3.33
2910 3088 6.215845 GTCATGCCTTAAAGTTTCATGTTGT 58.784 36.000 12.29 0.00 36.73 3.32
2911 3089 7.367285 GTCATGCCTTAAAGTTTCATGTTGTA 58.633 34.615 12.29 0.00 36.73 2.41
2912 3090 8.028938 GTCATGCCTTAAAGTTTCATGTTGTAT 58.971 33.333 12.29 0.00 36.73 2.29
2913 3091 9.237187 TCATGCCTTAAAGTTTCATGTTGTATA 57.763 29.630 12.29 0.00 36.73 1.47
2914 3092 9.853555 CATGCCTTAAAGTTTCATGTTGTATAA 57.146 29.630 6.78 0.00 32.26 0.98
2915 3093 9.855021 ATGCCTTAAAGTTTCATGTTGTATAAC 57.145 29.630 0.00 0.00 37.32 1.89
2916 3094 9.073475 TGCCTTAAAGTTTCATGTTGTATAACT 57.927 29.630 3.89 0.00 37.68 2.24
2917 3095 9.908152 GCCTTAAAGTTTCATGTTGTATAACTT 57.092 29.630 3.89 0.00 39.87 2.66
2997 3175 9.495754 GTTTGACTTCAGACAATTCTTATATGC 57.504 33.333 0.00 0.00 31.96 3.14
2998 3176 8.791327 TTGACTTCAGACAATTCTTATATGCA 57.209 30.769 0.00 0.00 0.00 3.96
2999 3177 8.429493 TGACTTCAGACAATTCTTATATGCAG 57.571 34.615 0.00 0.00 0.00 4.41
3000 3178 8.260114 TGACTTCAGACAATTCTTATATGCAGA 58.740 33.333 0.00 0.00 0.00 4.26
3001 3179 8.659925 ACTTCAGACAATTCTTATATGCAGAG 57.340 34.615 0.00 0.00 0.00 3.35
3002 3180 8.263640 ACTTCAGACAATTCTTATATGCAGAGT 58.736 33.333 0.00 0.00 0.00 3.24
3003 3181 9.755804 CTTCAGACAATTCTTATATGCAGAGTA 57.244 33.333 0.00 0.00 0.00 2.59
3012 3190 8.732746 TTCTTATATGCAGAGTAAAAAGGACC 57.267 34.615 0.00 0.00 0.00 4.46
3013 3191 6.984474 TCTTATATGCAGAGTAAAAAGGACCG 59.016 38.462 0.00 0.00 0.00 4.79
3014 3192 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
3015 3193 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
3016 3194 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
3051 3229 8.395633 ACTAACTTGCCTAGCATAAAAATAACG 58.604 33.333 0.00 0.00 38.76 3.18
3144 3323 4.026052 CTGAACCCCCAAAGCAAGAATAT 58.974 43.478 0.00 0.00 0.00 1.28
3232 3411 9.836864 TTTGTACACAGATTGCTGATTAGATAT 57.163 29.630 0.00 0.00 45.17 1.63
3744 4054 5.867174 GGTTTTGCTGGTAATTAACACATCC 59.133 40.000 0.00 3.83 0.00 3.51
3755 4065 6.801539 AATTAACACATCCGCTATACCATG 57.198 37.500 0.00 0.00 0.00 3.66
3758 4068 2.071540 CACATCCGCTATACCATGCAG 58.928 52.381 0.00 0.00 0.00 4.41
3776 4086 4.629527 GCAGTATTGCTTTTCGGTTTTG 57.370 40.909 2.45 0.00 46.95 2.44
3888 4198 8.749354 ACATGACTTTTTGTAGTTCTCCTTTTT 58.251 29.630 0.00 0.00 0.00 1.94
4466 4789 2.237143 TCAAATGTGTGCCTAGAGAGGG 59.763 50.000 0.00 0.00 43.97 4.30
4467 4790 1.207791 AATGTGTGCCTAGAGAGGGG 58.792 55.000 0.00 0.00 43.97 4.79
4549 4873 7.712264 TTGGTCTAAGATTGCAATTTTTGTG 57.288 32.000 19.10 10.79 0.00 3.33
4875 5199 3.700539 TGAAATGGGCCTGTCATATGTTG 59.299 43.478 4.53 0.00 0.00 3.33
4963 5287 4.813750 ATGGCCAAGAATTCTTTCAAGG 57.186 40.909 18.16 16.29 33.11 3.61
4964 5288 3.575805 TGGCCAAGAATTCTTTCAAGGT 58.424 40.909 18.16 0.00 33.11 3.50
4966 5290 4.202243 TGGCCAAGAATTCTTTCAAGGTTG 60.202 41.667 18.16 5.33 33.11 3.77
4967 5291 4.202253 GGCCAAGAATTCTTTCAAGGTTGT 60.202 41.667 18.16 0.00 33.11 3.32
4968 5292 4.746611 GCCAAGAATTCTTTCAAGGTTGTG 59.253 41.667 18.16 3.90 33.11 3.33
4969 5293 4.746611 CCAAGAATTCTTTCAAGGTTGTGC 59.253 41.667 18.16 0.00 33.11 4.57
4970 5294 5.452356 CCAAGAATTCTTTCAAGGTTGTGCT 60.452 40.000 18.16 0.00 33.11 4.40
5068 5417 6.341316 TCAAAGTGATGCTCTGATAACCTAC 58.659 40.000 0.00 0.00 0.00 3.18
5300 5653 1.005748 CTCAGTCTTGCGTGCCTCA 60.006 57.895 0.00 0.00 0.00 3.86
5314 5670 1.003597 CCTCACTCTGCTGCTGCTT 60.004 57.895 17.00 0.00 40.48 3.91
5414 5773 0.108585 TGAGACCCTCACAAAGTGCC 59.891 55.000 0.00 0.00 35.39 5.01
5420 5779 0.883833 CCTCACAAAGTGCCATGTCC 59.116 55.000 0.00 0.00 32.98 4.02
5489 5849 3.282021 TGCTTGAACTTGACTCAGCTTT 58.718 40.909 0.00 0.00 0.00 3.51
5625 5987 5.310451 TGTTTACCATCAGTTGTAACCCTC 58.690 41.667 0.00 0.00 0.00 4.30
5708 6089 4.155709 TGGTGCCAAAAATACATCTGGAA 58.844 39.130 0.00 0.00 0.00 3.53
5752 6140 6.280643 CAATTATGTACCGAGTGAATGGAGA 58.719 40.000 0.00 0.00 0.00 3.71
5763 6151 6.294176 CCGAGTGAATGGAGACTTTGAAATTT 60.294 38.462 0.00 0.00 0.00 1.82
5776 6164 4.769345 TTGAAATTTCCAACAAAGCCCT 57.231 36.364 15.48 0.00 0.00 5.19
5777 6165 4.070630 TGAAATTTCCAACAAAGCCCTG 57.929 40.909 15.48 0.00 0.00 4.45
5887 6275 2.159181 GCGTTGTGCATCTACCGTT 58.841 52.632 0.00 0.00 45.45 4.44
5918 6306 6.168389 CAACTATGGCATATGCATCAGTCTA 58.832 40.000 28.07 7.59 44.36 2.59
5922 6310 3.259123 TGGCATATGCATCAGTCTATCGT 59.741 43.478 28.07 0.00 44.36 3.73
6019 6408 4.806247 CCAGTCGACCAGATAAATTGTCTC 59.194 45.833 13.01 0.00 0.00 3.36
6106 6498 1.273048 GGCATTTGTGTTCAGGCATCA 59.727 47.619 0.00 0.00 0.00 3.07
6107 6499 2.331194 GCATTTGTGTTCAGGCATCAC 58.669 47.619 0.00 0.00 0.00 3.06
6182 6672 1.495878 AGCTTATCGCGATGCAGAAG 58.504 50.000 31.05 24.80 45.59 2.85
6226 6716 0.811281 GAGGGTGCGGGAGAATTTTG 59.189 55.000 0.00 0.00 0.00 2.44
6236 6726 1.327764 GGAGAATTTTGCCGCGTAGAG 59.672 52.381 4.92 0.00 0.00 2.43
6263 8231 6.753107 TCTACTATTGCTTAAACAAAGGGC 57.247 37.500 0.00 0.00 35.58 5.19
6301 8269 4.883021 AGGAGAGGATTGAGTGTACCTA 57.117 45.455 0.00 0.00 32.53 3.08
6427 8405 2.224867 CCTCTCTCATCTCTCCCTCTCC 60.225 59.091 0.00 0.00 0.00 3.71
6431 8409 0.856982 TCATCTCTCCCTCTCCCTCC 59.143 60.000 0.00 0.00 0.00 4.30
6440 8418 0.820871 CCTCTCCCTCCGAAGTCTTG 59.179 60.000 0.00 0.00 0.00 3.02
6444 8422 0.903454 TCCCTCCGAAGTCTTGACCC 60.903 60.000 0.00 0.00 0.00 4.46
6486 8464 1.327303 TGGCTTGCTGTTAGTTTGGG 58.673 50.000 0.00 0.00 0.00 4.12
6487 8465 1.328279 GGCTTGCTGTTAGTTTGGGT 58.672 50.000 0.00 0.00 0.00 4.51
6497 8475 0.981183 TAGTTTGGGTCGGCACTCAT 59.019 50.000 0.00 0.00 31.02 2.90
6499 8477 0.889186 GTTTGGGTCGGCACTCATGT 60.889 55.000 0.00 0.00 31.02 3.21
6528 8506 2.092753 GCTTTGATGATGGTGGAGAGGA 60.093 50.000 0.00 0.00 0.00 3.71
6555 8533 1.304282 GAGGGAGAAGCAATGGCCA 59.696 57.895 8.56 8.56 42.56 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.015367 GCCTGACTTATTAGTGATGATAGACTA 57.985 37.037 0.00 0.00 33.84 2.59
22 23 7.728083 AGCCTGACTTATTAGTGATGATAGACT 59.272 37.037 0.00 0.00 33.84 3.24
23 24 7.891561 AGCCTGACTTATTAGTGATGATAGAC 58.108 38.462 0.00 0.00 33.84 2.59
24 25 9.760926 ATAGCCTGACTTATTAGTGATGATAGA 57.239 33.333 0.00 0.00 33.84 1.98
26 27 9.533831 TGATAGCCTGACTTATTAGTGATGATA 57.466 33.333 0.00 0.00 33.84 2.15
27 28 8.310382 GTGATAGCCTGACTTATTAGTGATGAT 58.690 37.037 0.00 0.00 33.84 2.45
28 29 7.287696 TGTGATAGCCTGACTTATTAGTGATGA 59.712 37.037 0.00 0.00 33.84 2.92
29 30 7.436933 TGTGATAGCCTGACTTATTAGTGATG 58.563 38.462 0.00 0.00 33.84 3.07
30 31 7.603180 TGTGATAGCCTGACTTATTAGTGAT 57.397 36.000 0.00 0.00 33.84 3.06
31 32 7.287696 TGATGTGATAGCCTGACTTATTAGTGA 59.712 37.037 0.00 0.00 33.84 3.41
32 33 7.436933 TGATGTGATAGCCTGACTTATTAGTG 58.563 38.462 0.00 0.00 33.84 2.74
33 34 7.603180 TGATGTGATAGCCTGACTTATTAGT 57.397 36.000 0.00 0.00 37.31 2.24
36 37 8.600668 ACATATGATGTGATAGCCTGACTTATT 58.399 33.333 10.38 0.00 43.01 1.40
37 38 8.143673 ACATATGATGTGATAGCCTGACTTAT 57.856 34.615 10.38 0.00 43.01 1.73
38 39 7.544804 ACATATGATGTGATAGCCTGACTTA 57.455 36.000 10.38 0.00 43.01 2.24
39 40 6.430962 ACATATGATGTGATAGCCTGACTT 57.569 37.500 10.38 0.00 43.01 3.01
52 53 2.779430 TCCAAGCCCTCACATATGATGT 59.221 45.455 10.38 0.00 46.22 3.06
53 54 3.409570 CTCCAAGCCCTCACATATGATG 58.590 50.000 10.38 4.41 33.22 3.07
54 55 2.224719 GCTCCAAGCCCTCACATATGAT 60.225 50.000 10.38 0.00 34.48 2.45
103 104 3.004944 TGGTAAACGAATGCCCAAGTTTC 59.995 43.478 0.00 0.00 37.83 2.78
121 122 4.994852 CCTTTGTCTTCGAGAACATTGGTA 59.005 41.667 3.18 0.00 0.00 3.25
158 159 1.072331 AGAAACGACTGCTCCCACAAT 59.928 47.619 0.00 0.00 0.00 2.71
160 161 0.468226 AAGAAACGACTGCTCCCACA 59.532 50.000 0.00 0.00 0.00 4.17
176 177 3.973973 TCTCCTCTGAAAAGGTTGGAAGA 59.026 43.478 0.00 0.00 37.69 2.87
177 178 4.357918 TCTCCTCTGAAAAGGTTGGAAG 57.642 45.455 0.00 0.00 37.69 3.46
179 180 5.571658 GCTAATCTCCTCTGAAAAGGTTGGA 60.572 44.000 1.18 0.00 37.69 3.53
203 204 1.681264 GTTCACACTTTTGGGGGAGTG 59.319 52.381 2.22 2.22 46.65 3.51
240 241 1.003580 ACAGCCGAAAGTGATGGTGAT 59.996 47.619 0.00 0.00 0.00 3.06
282 283 6.863126 GCAACAGACAAGCAAGTAATAACATT 59.137 34.615 0.00 0.00 0.00 2.71
283 284 6.381801 GCAACAGACAAGCAAGTAATAACAT 58.618 36.000 0.00 0.00 0.00 2.71
301 302 1.274728 AGAGCTACACAGAGGCAACAG 59.725 52.381 0.00 0.00 41.41 3.16
339 340 7.819415 GCAGCTAAGTGATACACCATATATGAA 59.181 37.037 14.54 0.00 34.49 2.57
361 362 3.751175 TGCGGGTTATTTAGATATGCAGC 59.249 43.478 0.00 0.00 0.00 5.25
455 456 8.604184 AGGATCAAAGATGTGCTAGATATCAAT 58.396 33.333 5.32 0.00 0.00 2.57
468 469 7.830099 AGAAAAACTGAAGGATCAAAGATGT 57.170 32.000 0.00 0.00 34.49 3.06
505 506 1.383523 TGTCATTCGCACAAACACCA 58.616 45.000 0.00 0.00 0.00 4.17
522 523 3.865745 CCAACTCGAAGATAAAGCGATGT 59.134 43.478 0.00 0.00 33.89 3.06
525 526 2.268298 GCCAACTCGAAGATAAAGCGA 58.732 47.619 0.00 0.00 33.89 4.93
581 582 3.374402 CTCCACCGACTCCGTGCT 61.374 66.667 0.00 0.00 0.00 4.40
600 601 0.314302 CACTAGGAATCTACGCCGGG 59.686 60.000 2.18 0.00 0.00 5.73
604 605 6.476053 CCTAAAAAGACACTAGGAATCTACGC 59.524 42.308 0.00 0.00 35.17 4.42
606 607 6.762187 GCCCTAAAAAGACACTAGGAATCTAC 59.238 42.308 0.00 0.00 35.17 2.59
607 608 6.406624 CGCCCTAAAAAGACACTAGGAATCTA 60.407 42.308 0.00 0.00 35.17 1.98
608 609 5.627040 CGCCCTAAAAAGACACTAGGAATCT 60.627 44.000 0.00 0.00 35.17 2.40
609 610 4.571176 CGCCCTAAAAAGACACTAGGAATC 59.429 45.833 0.00 0.00 35.17 2.52
610 611 4.514401 CGCCCTAAAAAGACACTAGGAAT 58.486 43.478 0.00 0.00 35.17 3.01
611 612 3.867216 GCGCCCTAAAAAGACACTAGGAA 60.867 47.826 0.00 0.00 35.17 3.36
612 613 2.354403 GCGCCCTAAAAAGACACTAGGA 60.354 50.000 0.00 0.00 35.17 2.94
613 614 2.007608 GCGCCCTAAAAAGACACTAGG 58.992 52.381 0.00 0.00 33.30 3.02
614 615 2.007608 GGCGCCCTAAAAAGACACTAG 58.992 52.381 18.11 0.00 0.00 2.57
615 616 1.673626 CGGCGCCCTAAAAAGACACTA 60.674 52.381 23.46 0.00 0.00 2.74
616 617 0.953960 CGGCGCCCTAAAAAGACACT 60.954 55.000 23.46 0.00 0.00 3.55
617 618 1.232621 ACGGCGCCCTAAAAAGACAC 61.233 55.000 23.46 0.00 0.00 3.67
618 619 0.321021 TACGGCGCCCTAAAAAGACA 59.679 50.000 23.46 0.00 0.00 3.41
619 620 1.004595 CTACGGCGCCCTAAAAAGAC 58.995 55.000 23.46 0.00 0.00 3.01
620 621 0.896923 TCTACGGCGCCCTAAAAAGA 59.103 50.000 23.46 11.62 0.00 2.52
621 622 1.949465 ATCTACGGCGCCCTAAAAAG 58.051 50.000 23.46 7.36 0.00 2.27
622 623 2.282407 GAATCTACGGCGCCCTAAAAA 58.718 47.619 23.46 1.58 0.00 1.94
623 624 1.473788 GGAATCTACGGCGCCCTAAAA 60.474 52.381 23.46 5.27 0.00 1.52
624 625 0.105408 GGAATCTACGGCGCCCTAAA 59.895 55.000 23.46 0.00 0.00 1.85
625 626 0.757935 AGGAATCTACGGCGCCCTAA 60.758 55.000 23.46 5.21 0.00 2.69
626 627 0.111061 TAGGAATCTACGGCGCCCTA 59.889 55.000 23.46 13.36 0.00 3.53
627 628 1.152610 TAGGAATCTACGGCGCCCT 60.153 57.895 23.46 12.81 0.00 5.19
628 629 1.289380 CTAGGAATCTACGGCGCCC 59.711 63.158 23.46 4.12 0.00 6.13
629 630 0.318784 CACTAGGAATCTACGGCGCC 60.319 60.000 19.07 19.07 0.00 6.53
630 631 0.384669 ACACTAGGAATCTACGGCGC 59.615 55.000 6.90 0.00 0.00 6.53
631 632 1.948145 AGACACTAGGAATCTACGGCG 59.052 52.381 4.80 4.80 0.00 6.46
632 633 3.633065 AGAAGACACTAGGAATCTACGGC 59.367 47.826 0.00 0.00 0.00 5.68
633 634 5.838531 AAGAAGACACTAGGAATCTACGG 57.161 43.478 0.00 0.00 0.00 4.02
676 678 0.308993 GCACACTCACTGCCAGAAAC 59.691 55.000 0.00 0.00 0.00 2.78
684 686 1.215014 TTTCTCGCGCACACTCACTG 61.215 55.000 8.75 0.00 0.00 3.66
685 687 0.529773 TTTTCTCGCGCACACTCACT 60.530 50.000 8.75 0.00 0.00 3.41
750 753 1.686052 GAGGACAAGCATCCGAGAGAT 59.314 52.381 0.00 0.00 44.22 2.75
756 759 0.249073 CCTACGAGGACAAGCATCCG 60.249 60.000 0.00 0.00 44.22 4.18
760 763 1.292223 GTGCCTACGAGGACAAGCA 59.708 57.895 5.24 0.00 37.67 3.91
771 774 1.153901 TCTTAGCGCACGTGCCTAC 60.154 57.895 33.23 22.65 37.91 3.18
772 775 1.153901 GTCTTAGCGCACGTGCCTA 60.154 57.895 33.23 28.63 37.91 3.93
798 801 8.377681 TCATAAATTTTATCTTGTCGACGACAC 58.622 33.333 29.22 4.86 42.60 3.67
933 1102 0.391263 AAATCCGCCGTGTTCCTCTC 60.391 55.000 0.00 0.00 0.00 3.20
969 1138 5.046591 TCGGATGTGACAAGATCTAGGTTTT 60.047 40.000 0.00 0.00 0.00 2.43
1483 1658 9.492973 CAAAACCCAAATCAGACAAGAATAAAT 57.507 29.630 0.00 0.00 0.00 1.40
1487 1662 6.484364 ACAAAACCCAAATCAGACAAGAAT 57.516 33.333 0.00 0.00 0.00 2.40
1490 1665 5.659463 TCAACAAAACCCAAATCAGACAAG 58.341 37.500 0.00 0.00 0.00 3.16
1491 1666 5.667539 TCAACAAAACCCAAATCAGACAA 57.332 34.783 0.00 0.00 0.00 3.18
1492 1667 5.867903 ATCAACAAAACCCAAATCAGACA 57.132 34.783 0.00 0.00 0.00 3.41
1493 1668 5.402270 CGAATCAACAAAACCCAAATCAGAC 59.598 40.000 0.00 0.00 0.00 3.51
1801 1976 1.591619 CGTGTGATGATACTGCTGCTG 59.408 52.381 4.89 4.89 0.00 4.41
1906 2081 3.009033 AGCTCACACAACAGGGCTATTAA 59.991 43.478 0.00 0.00 0.00 1.40
1980 2155 2.270352 AAAACTGAGCGGACCATGAA 57.730 45.000 0.00 0.00 0.00 2.57
2028 2203 3.503748 AGGCTGTAATCAGAAAGTTGCAC 59.496 43.478 0.00 0.00 43.76 4.57
2044 2219 1.339151 GGATCGACCAAAGAAGGCTGT 60.339 52.381 0.00 0.00 38.79 4.40
2155 2331 7.119407 CCTGGAGAGCTCATAATAAATGATGTG 59.881 40.741 17.77 0.00 0.00 3.21
2211 2387 5.165961 ACATTAGCTAAACAGCTCTTCCA 57.834 39.130 10.85 0.00 45.00 3.53
2281 2457 1.390123 CGTAACGCACAATCTGGACTG 59.610 52.381 0.00 0.00 0.00 3.51
2443 2620 7.286775 AGCTAAGGAACTGTTGATTTGGTTTTA 59.713 33.333 0.00 0.00 40.86 1.52
2447 2624 4.520492 CAGCTAAGGAACTGTTGATTTGGT 59.480 41.667 0.00 0.00 40.86 3.67
2624 2802 8.981647 CAAACCTGATAAATGTTCAAAAGAAGG 58.018 33.333 0.00 0.00 0.00 3.46
2768 2946 1.730612 GCGAACTAAAAAGGACCGGAG 59.269 52.381 9.46 0.00 0.00 4.63
2769 2947 1.070445 TGCGAACTAAAAAGGACCGGA 59.930 47.619 9.46 0.00 0.00 5.14
2770 2948 1.515081 TGCGAACTAAAAAGGACCGG 58.485 50.000 0.00 0.00 0.00 5.28
2771 2949 5.479716 AATATGCGAACTAAAAAGGACCG 57.520 39.130 0.00 0.00 0.00 4.79
2772 2950 7.781548 TCTAATATGCGAACTAAAAAGGACC 57.218 36.000 0.00 0.00 0.00 4.46
2779 2957 9.594478 TCAGACAAATCTAATATGCGAACTAAA 57.406 29.630 0.00 0.00 32.25 1.85
2780 2958 9.594478 TTCAGACAAATCTAATATGCGAACTAA 57.406 29.630 0.00 0.00 32.25 2.24
2781 2959 9.249457 CTTCAGACAAATCTAATATGCGAACTA 57.751 33.333 0.00 0.00 32.25 2.24
2782 2960 7.766278 ACTTCAGACAAATCTAATATGCGAACT 59.234 33.333 0.00 0.00 32.25 3.01
2783 2961 7.910304 ACTTCAGACAAATCTAATATGCGAAC 58.090 34.615 0.00 0.00 32.25 3.95
2784 2962 7.763985 TGACTTCAGACAAATCTAATATGCGAA 59.236 33.333 0.00 0.00 32.25 4.70
2785 2963 7.264947 TGACTTCAGACAAATCTAATATGCGA 58.735 34.615 0.00 0.00 32.25 5.10
2786 2964 7.468922 TGACTTCAGACAAATCTAATATGCG 57.531 36.000 0.00 0.00 32.25 4.73
2787 2965 8.341173 CCTTGACTTCAGACAAATCTAATATGC 58.659 37.037 0.00 0.00 32.25 3.14
2788 2966 8.341173 GCCTTGACTTCAGACAAATCTAATATG 58.659 37.037 0.00 0.00 32.25 1.78
2789 2967 8.270744 AGCCTTGACTTCAGACAAATCTAATAT 58.729 33.333 0.00 0.00 32.25 1.28
2790 2968 7.624549 AGCCTTGACTTCAGACAAATCTAATA 58.375 34.615 0.00 0.00 32.25 0.98
2791 2969 6.479884 AGCCTTGACTTCAGACAAATCTAAT 58.520 36.000 0.00 0.00 32.25 1.73
2792 2970 5.869579 AGCCTTGACTTCAGACAAATCTAA 58.130 37.500 0.00 0.00 32.25 2.10
2793 2971 5.482908 GAGCCTTGACTTCAGACAAATCTA 58.517 41.667 0.00 0.00 32.25 1.98
2794 2972 4.322567 GAGCCTTGACTTCAGACAAATCT 58.677 43.478 0.00 0.00 34.57 2.40
2795 2973 3.124297 CGAGCCTTGACTTCAGACAAATC 59.876 47.826 0.00 0.00 30.22 2.17
2796 2974 3.070018 CGAGCCTTGACTTCAGACAAAT 58.930 45.455 0.00 0.00 30.22 2.32
2797 2975 2.158957 ACGAGCCTTGACTTCAGACAAA 60.159 45.455 0.00 0.00 30.22 2.83
2798 2976 1.412710 ACGAGCCTTGACTTCAGACAA 59.587 47.619 0.00 0.00 0.00 3.18
2799 2977 1.040646 ACGAGCCTTGACTTCAGACA 58.959 50.000 0.00 0.00 0.00 3.41
2800 2978 3.299340 TTACGAGCCTTGACTTCAGAC 57.701 47.619 0.00 0.00 0.00 3.51
2801 2979 3.321111 ACTTTACGAGCCTTGACTTCAGA 59.679 43.478 0.00 0.00 0.00 3.27
2802 2980 3.654414 ACTTTACGAGCCTTGACTTCAG 58.346 45.455 0.00 0.00 0.00 3.02
2803 2981 3.746045 ACTTTACGAGCCTTGACTTCA 57.254 42.857 0.00 0.00 0.00 3.02
2804 2982 4.510340 TCAAACTTTACGAGCCTTGACTTC 59.490 41.667 0.00 0.00 29.96 3.01
2805 2983 4.272748 GTCAAACTTTACGAGCCTTGACTT 59.727 41.667 5.69 0.00 42.56 3.01
2806 2984 3.808174 GTCAAACTTTACGAGCCTTGACT 59.192 43.478 5.69 0.00 42.56 3.41
2807 2985 3.059120 GGTCAAACTTTACGAGCCTTGAC 60.059 47.826 4.55 4.55 43.78 3.18
2808 2986 3.135994 GGTCAAACTTTACGAGCCTTGA 58.864 45.455 0.00 0.00 31.55 3.02
2809 2987 2.875933 TGGTCAAACTTTACGAGCCTTG 59.124 45.455 0.00 0.00 0.00 3.61
2810 2988 3.202829 TGGTCAAACTTTACGAGCCTT 57.797 42.857 0.00 0.00 0.00 4.35
2811 2989 2.876550 GTTGGTCAAACTTTACGAGCCT 59.123 45.455 0.00 0.00 35.75 4.58
2812 2990 3.263602 GTTGGTCAAACTTTACGAGCC 57.736 47.619 0.00 0.00 35.75 4.70
2860 3038 8.982685 CGCATCTACTAGTATTGATTTCACATT 58.017 33.333 14.18 0.00 0.00 2.71
2861 3039 8.144478 ACGCATCTACTAGTATTGATTTCACAT 58.856 33.333 14.18 0.00 0.00 3.21
2862 3040 7.489160 ACGCATCTACTAGTATTGATTTCACA 58.511 34.615 14.18 0.00 0.00 3.58
2863 3041 7.648112 TGACGCATCTACTAGTATTGATTTCAC 59.352 37.037 14.18 4.39 0.00 3.18
2864 3042 7.712797 TGACGCATCTACTAGTATTGATTTCA 58.287 34.615 14.18 9.09 0.00 2.69
2865 3043 8.642885 CATGACGCATCTACTAGTATTGATTTC 58.357 37.037 14.18 7.31 0.00 2.17
2866 3044 7.116948 GCATGACGCATCTACTAGTATTGATTT 59.883 37.037 14.18 0.00 41.79 2.17
2867 3045 6.587990 GCATGACGCATCTACTAGTATTGATT 59.412 38.462 14.18 3.20 41.79 2.57
2868 3046 6.096036 GCATGACGCATCTACTAGTATTGAT 58.904 40.000 14.18 7.69 41.79 2.57
2869 3047 5.461526 GCATGACGCATCTACTAGTATTGA 58.538 41.667 14.18 5.90 41.79 2.57
2870 3048 4.623167 GGCATGACGCATCTACTAGTATTG 59.377 45.833 2.33 5.91 45.17 1.90
2871 3049 4.524714 AGGCATGACGCATCTACTAGTATT 59.475 41.667 2.33 0.00 45.17 1.89
2872 3050 4.082845 AGGCATGACGCATCTACTAGTAT 58.917 43.478 2.33 0.00 45.17 2.12
2873 3051 3.487372 AGGCATGACGCATCTACTAGTA 58.513 45.455 1.89 1.89 45.17 1.82
2874 3052 2.311463 AGGCATGACGCATCTACTAGT 58.689 47.619 0.00 0.00 45.17 2.57
2875 3053 3.377346 AAGGCATGACGCATCTACTAG 57.623 47.619 0.00 0.00 45.17 2.57
2876 3054 4.929819 TTAAGGCATGACGCATCTACTA 57.070 40.909 0.00 0.00 45.17 1.82
2877 3055 3.819564 TTAAGGCATGACGCATCTACT 57.180 42.857 0.00 0.00 45.17 2.57
2878 3056 3.871594 ACTTTAAGGCATGACGCATCTAC 59.128 43.478 0.00 0.00 45.17 2.59
2879 3057 4.137116 ACTTTAAGGCATGACGCATCTA 57.863 40.909 0.00 0.00 45.17 1.98
2880 3058 2.991250 ACTTTAAGGCATGACGCATCT 58.009 42.857 0.00 0.00 45.17 2.90
2881 3059 3.764885 AACTTTAAGGCATGACGCATC 57.235 42.857 0.00 0.00 45.17 3.91
2882 3060 3.505680 TGAAACTTTAAGGCATGACGCAT 59.494 39.130 0.00 0.00 45.17 4.73
2883 3061 2.881513 TGAAACTTTAAGGCATGACGCA 59.118 40.909 0.00 0.00 45.17 5.24
2884 3062 3.552604 TGAAACTTTAAGGCATGACGC 57.447 42.857 0.00 0.00 41.28 5.19
2885 3063 5.046910 ACATGAAACTTTAAGGCATGACG 57.953 39.130 21.99 5.80 38.82 4.35
2886 3064 6.215845 ACAACATGAAACTTTAAGGCATGAC 58.784 36.000 21.99 0.00 38.82 3.06
2887 3065 6.403866 ACAACATGAAACTTTAAGGCATGA 57.596 33.333 21.99 0.00 38.82 3.07
2888 3066 9.853555 TTATACAACATGAAACTTTAAGGCATG 57.146 29.630 16.96 16.96 41.44 4.06
2889 3067 9.855021 GTTATACAACATGAAACTTTAAGGCAT 57.145 29.630 0.00 0.00 34.60 4.40
2890 3068 9.073475 AGTTATACAACATGAAACTTTAAGGCA 57.927 29.630 0.00 0.00 37.10 4.75
2891 3069 9.908152 AAGTTATACAACATGAAACTTTAAGGC 57.092 29.630 0.00 0.00 37.13 4.35
2971 3149 9.495754 GCATATAAGAATTGTCTGAAGTCAAAC 57.504 33.333 0.00 0.00 33.05 2.93
2972 3150 9.230122 TGCATATAAGAATTGTCTGAAGTCAAA 57.770 29.630 0.00 0.00 33.05 2.69
2973 3151 8.791327 TGCATATAAGAATTGTCTGAAGTCAA 57.209 30.769 0.00 0.00 33.05 3.18
2974 3152 8.260114 TCTGCATATAAGAATTGTCTGAAGTCA 58.740 33.333 0.00 0.00 33.05 3.41
2975 3153 8.654230 TCTGCATATAAGAATTGTCTGAAGTC 57.346 34.615 0.00 0.00 33.05 3.01
2976 3154 8.263640 ACTCTGCATATAAGAATTGTCTGAAGT 58.736 33.333 0.00 0.00 33.05 3.01
2977 3155 8.659925 ACTCTGCATATAAGAATTGTCTGAAG 57.340 34.615 0.00 0.00 33.05 3.02
2986 3164 9.343539 GGTCCTTTTTACTCTGCATATAAGAAT 57.656 33.333 0.00 0.00 0.00 2.40
2987 3165 7.494625 CGGTCCTTTTTACTCTGCATATAAGAA 59.505 37.037 0.00 0.00 0.00 2.52
2988 3166 6.984474 CGGTCCTTTTTACTCTGCATATAAGA 59.016 38.462 0.00 0.00 0.00 2.10
2989 3167 6.202954 CCGGTCCTTTTTACTCTGCATATAAG 59.797 42.308 0.00 0.00 0.00 1.73
2990 3168 6.053005 CCGGTCCTTTTTACTCTGCATATAA 58.947 40.000 0.00 0.00 0.00 0.98
2991 3169 5.364446 TCCGGTCCTTTTTACTCTGCATATA 59.636 40.000 0.00 0.00 0.00 0.86
2992 3170 4.163458 TCCGGTCCTTTTTACTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
2993 3171 3.516300 TCCGGTCCTTTTTACTCTGCATA 59.484 43.478 0.00 0.00 0.00 3.14
2994 3172 2.304761 TCCGGTCCTTTTTACTCTGCAT 59.695 45.455 0.00 0.00 0.00 3.96
2995 3173 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
2996 3174 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
2997 3175 2.354805 CCCTCCGGTCCTTTTTACTCTG 60.355 54.545 0.00 0.00 0.00 3.35
2998 3176 1.907255 CCCTCCGGTCCTTTTTACTCT 59.093 52.381 0.00 0.00 0.00 3.24
2999 3177 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
3000 3178 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
3001 3179 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
3002 3180 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
3003 3181 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
3004 3182 2.265526 ATACTCCCTCCGGTCCTTTT 57.734 50.000 0.00 0.00 0.00 2.27
3005 3183 2.265526 AATACTCCCTCCGGTCCTTT 57.734 50.000 0.00 0.00 0.00 3.11
3006 3184 2.246849 AGTAATACTCCCTCCGGTCCTT 59.753 50.000 0.00 0.00 0.00 3.36
3007 3185 1.858246 AGTAATACTCCCTCCGGTCCT 59.142 52.381 0.00 0.00 0.00 3.85
3008 3186 2.378378 AGTAATACTCCCTCCGGTCC 57.622 55.000 0.00 0.00 0.00 4.46
3009 3187 4.468713 AGTTAGTAATACTCCCTCCGGTC 58.531 47.826 0.00 0.00 0.00 4.79
3010 3188 4.533001 AGTTAGTAATACTCCCTCCGGT 57.467 45.455 0.00 0.00 0.00 5.28
3011 3189 4.501058 GCAAGTTAGTAATACTCCCTCCGG 60.501 50.000 0.00 0.00 0.00 5.14
3012 3190 4.501058 GGCAAGTTAGTAATACTCCCTCCG 60.501 50.000 0.00 0.00 0.00 4.63
3013 3191 4.654724 AGGCAAGTTAGTAATACTCCCTCC 59.345 45.833 0.00 0.00 0.00 4.30
3014 3192 5.873146 AGGCAAGTTAGTAATACTCCCTC 57.127 43.478 0.00 0.00 0.00 4.30
3015 3193 5.304871 GCTAGGCAAGTTAGTAATACTCCCT 59.695 44.000 0.00 0.00 0.00 4.20
3016 3194 5.070047 TGCTAGGCAAGTTAGTAATACTCCC 59.930 44.000 0.00 0.00 34.76 4.30
3017 3195 6.158023 TGCTAGGCAAGTTAGTAATACTCC 57.842 41.667 0.00 0.00 34.76 3.85
3018 3196 9.760077 TTTATGCTAGGCAAGTTAGTAATACTC 57.240 33.333 0.00 0.00 43.62 2.59
3051 3229 4.518970 ACATGTGGACAGTTTTATGTGGTC 59.481 41.667 0.00 0.00 32.25 4.02
3118 3297 0.250553 TGCTTTGGGGGTTCAGTACG 60.251 55.000 0.00 0.00 0.00 3.67
3420 3599 8.166726 AGAAGGGAAGAGTAATTTCTTGTCAAT 58.833 33.333 0.00 0.00 37.53 2.57
3494 3675 1.272092 TGGGAACAAAGGATCTGCTGG 60.272 52.381 0.00 0.00 37.44 4.85
3642 3952 3.191371 GGTGGCATGTAAACCTTGAAGAG 59.809 47.826 0.00 0.00 0.00 2.85
3758 4068 4.210328 CCCAACAAAACCGAAAAGCAATAC 59.790 41.667 0.00 0.00 0.00 1.89
3769 4079 4.092237 GTGTTTTCTTTCCCAACAAAACCG 59.908 41.667 0.00 0.00 37.75 4.44
3776 4086 5.847111 AACCTAGTGTTTTCTTTCCCAAC 57.153 39.130 0.00 0.00 31.47 3.77
4466 4789 8.028938 GGACATATAAATGTATCAAATGGTGCC 58.971 37.037 0.00 0.00 46.49 5.01
4467 4790 8.575589 TGGACATATAAATGTATCAAATGGTGC 58.424 33.333 0.00 0.00 46.49 5.01
4549 4873 3.105187 TGGCATGACCATCTGATGC 57.895 52.632 12.17 1.09 46.36 3.91
4635 4959 6.318144 GTGACATCTGATGTGGAATCAAAGAT 59.682 38.462 26.71 0.00 45.03 2.40
4875 5199 2.234143 GGAGGGGAAATGCATTAGCTC 58.766 52.381 13.39 7.93 42.74 4.09
4998 5347 4.785453 GGCTGGACCGCTGGAAGG 62.785 72.222 7.98 0.00 0.00 3.46
5098 5447 5.120208 CCACCAGATCTTACACTAAAACACG 59.880 44.000 0.00 0.00 0.00 4.49
5300 5653 1.671704 GCAGAAGCAGCAGCAGAGT 60.672 57.895 3.17 0.00 45.49 3.24
5314 5670 0.463295 GCAGGATTAGCAGCAGCAGA 60.463 55.000 3.17 0.00 45.49 4.26
5414 5773 4.935352 TTGTTTTTCTTCCAGGGACATG 57.065 40.909 0.00 0.00 0.00 3.21
5489 5849 3.523157 TCCATTGTGAAGAAGGCTATCCA 59.477 43.478 0.00 0.00 33.74 3.41
5708 6089 1.844497 GGTAGTACCAGCCAAATCCCT 59.156 52.381 14.82 0.00 38.42 4.20
5752 6140 4.881273 GGGCTTTGTTGGAAATTTCAAAGT 59.119 37.500 19.49 0.00 44.57 2.66
5763 6151 0.257328 TGTCACAGGGCTTTGTTGGA 59.743 50.000 0.00 0.00 0.00 3.53
5776 6164 2.205911 TCTTTCGCGAACAATGTCACA 58.794 42.857 23.33 2.07 0.00 3.58
5777 6165 2.941891 TCTTTCGCGAACAATGTCAC 57.058 45.000 23.33 0.00 0.00 3.67
6019 6408 1.901650 GAGACAAAGCCAGGCGAACG 61.902 60.000 5.55 0.00 0.00 3.95
6182 6672 0.241213 TGCAGACAGAGCAGTCGTAC 59.759 55.000 0.00 0.00 43.24 3.67
6215 6705 0.377203 CTACGCGGCAAAATTCTCCC 59.623 55.000 12.47 0.00 0.00 4.30
6226 6716 2.274920 AGTAGAAAACTCTACGCGGC 57.725 50.000 12.47 0.00 45.23 6.53
6236 6726 9.406828 CCCTTTGTTTAAGCAATAGTAGAAAAC 57.593 33.333 5.52 0.00 32.19 2.43
6278 8246 4.538738 AGGTACACTCAATCCTCTCCTAC 58.461 47.826 0.00 0.00 0.00 3.18
6359 8327 1.227089 CAATCCGCTCCAGACGAGG 60.227 63.158 0.00 0.00 39.22 4.63
6427 8405 1.215647 CGGGTCAAGACTTCGGAGG 59.784 63.158 0.00 0.00 0.00 4.30
6431 8409 0.319555 TTGCTCGGGTCAAGACTTCG 60.320 55.000 0.00 5.39 0.00 3.79
6440 8418 0.460459 GCCTACTTCTTGCTCGGGTC 60.460 60.000 0.00 0.00 0.00 4.46
6463 8441 1.549203 AACTAACAGCAAGCCATGGG 58.451 50.000 15.13 0.00 0.00 4.00
6497 8475 0.178967 TCATCAAAGCCCCTTGCACA 60.179 50.000 0.00 0.00 44.83 4.57
6499 8477 1.187974 CATCATCAAAGCCCCTTGCA 58.812 50.000 0.00 0.00 44.83 4.08
6528 8506 3.113191 TGCTTCTCCCTCATCTCTCTT 57.887 47.619 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.