Multiple sequence alignment - TraesCS2A01G306500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G306500 chr2A 100.000 5334 0 0 1 5334 527462357 527457024 0.000000e+00 9851.0
1 TraesCS2A01G306500 chr2A 98.800 750 4 5 2351 3096 5626236 5625488 0.000000e+00 1330.0
2 TraesCS2A01G306500 chr2A 75.806 186 37 5 4883 5066 5827689 5827510 2.650000e-13 87.9
3 TraesCS2A01G306500 chr2D 97.705 2353 53 1 1 2352 390734080 390731728 0.000000e+00 4045.0
4 TraesCS2A01G306500 chr2D 97.260 1314 29 4 3081 4388 390731747 390730435 0.000000e+00 2220.0
5 TraesCS2A01G306500 chr2D 92.035 226 7 2 4391 4616 390729954 390730168 1.870000e-79 307.0
6 TraesCS2A01G306500 chr2D 84.106 151 18 3 5189 5334 580398533 580398682 2.000000e-29 141.0
7 TraesCS2A01G306500 chr2B 93.170 1713 78 14 3081 4772 461980017 461978323 0.000000e+00 2479.0
8 TraesCS2A01G306500 chr2B 97.924 1349 25 3 1 1347 461982382 461981035 0.000000e+00 2333.0
9 TraesCS2A01G306500 chr2B 97.168 1024 19 3 1331 2351 461981015 461979999 0.000000e+00 1722.0
10 TraesCS2A01G306500 chr2B 87.919 149 13 2 5189 5332 433123732 433123584 2.550000e-38 171.0
11 TraesCS2A01G306500 chr3B 99.728 736 1 1 2347 3082 389958334 389957600 0.000000e+00 1347.0
12 TraesCS2A01G306500 chr5B 99.592 736 2 1 2347 3082 48315536 48316270 0.000000e+00 1341.0
13 TraesCS2A01G306500 chr5B 87.755 147 11 4 5189 5329 474058292 474058147 1.190000e-36 165.0
14 TraesCS2A01G306500 chr5B 84.559 136 16 3 5189 5319 636266641 636266776 4.340000e-26 130.0
15 TraesCS2A01G306500 chr4B 99.592 736 2 1 2347 3082 5373602 5372868 0.000000e+00 1341.0
16 TraesCS2A01G306500 chr4B 99.457 736 3 1 2347 3082 498403215 498403949 0.000000e+00 1336.0
17 TraesCS2A01G306500 chr6B 99.457 736 3 1 2347 3082 58830234 58829500 0.000000e+00 1336.0
18 TraesCS2A01G306500 chr4A 99.323 739 4 1 2347 3084 575464401 575465139 0.000000e+00 1336.0
19 TraesCS2A01G306500 chr4A 76.974 152 23 7 5039 5178 146553802 146553651 5.730000e-10 76.8
20 TraesCS2A01G306500 chr1B 99.457 736 3 1 2347 3082 451911197 451910463 0.000000e+00 1336.0
21 TraesCS2A01G306500 chr1B 80.435 92 17 1 5039 5129 66127033 66127124 9.590000e-08 69.4
22 TraesCS2A01G306500 chr1B 88.462 52 5 1 5032 5083 536755732 536755682 1.600000e-05 62.1
23 TraesCS2A01G306500 chr1A 99.457 736 3 1 2347 3082 369458084 369457350 0.000000e+00 1336.0
24 TraesCS2A01G306500 chr1A 83.117 77 12 1 5039 5115 324567208 324567283 9.590000e-08 69.4
25 TraesCS2A01G306500 chr1A 88.462 52 5 1 5032 5083 496463772 496463722 1.600000e-05 62.1
26 TraesCS2A01G306500 chr5A 84.932 146 17 2 5189 5329 633323991 633324136 5.570000e-30 143.0
27 TraesCS2A01G306500 chr6A 84.106 151 18 4 5189 5334 511492016 511491867 2.000000e-29 141.0
28 TraesCS2A01G306500 chr6A 82.292 96 11 3 5032 5122 224242774 224242680 1.590000e-10 78.7
29 TraesCS2A01G306500 chr4D 84.106 151 19 2 5189 5334 363573707 363573557 2.000000e-29 141.0
30 TraesCS2A01G306500 chr6D 82.877 146 20 2 5189 5329 38625890 38625745 5.610000e-25 126.0
31 TraesCS2A01G306500 chr6D 88.000 100 11 1 5189 5287 370581684 370581585 3.380000e-22 117.0
32 TraesCS2A01G306500 chr6D 75.182 137 25 6 5032 5163 186804316 186804448 7.460000e-04 56.5
33 TraesCS2A01G306500 chr1D 80.899 89 11 4 5006 5094 253017875 253017957 1.240000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G306500 chr2A 527457024 527462357 5333 True 9851.0 9851 100.000000 1 5334 1 chr2A.!!$R3 5333
1 TraesCS2A01G306500 chr2A 5625488 5626236 748 True 1330.0 1330 98.800000 2351 3096 1 chr2A.!!$R1 745
2 TraesCS2A01G306500 chr2D 390730435 390734080 3645 True 3132.5 4045 97.482500 1 4388 2 chr2D.!!$R1 4387
3 TraesCS2A01G306500 chr2B 461978323 461982382 4059 True 2178.0 2479 96.087333 1 4772 3 chr2B.!!$R2 4771
4 TraesCS2A01G306500 chr3B 389957600 389958334 734 True 1347.0 1347 99.728000 2347 3082 1 chr3B.!!$R1 735
5 TraesCS2A01G306500 chr5B 48315536 48316270 734 False 1341.0 1341 99.592000 2347 3082 1 chr5B.!!$F1 735
6 TraesCS2A01G306500 chr4B 5372868 5373602 734 True 1341.0 1341 99.592000 2347 3082 1 chr4B.!!$R1 735
7 TraesCS2A01G306500 chr4B 498403215 498403949 734 False 1336.0 1336 99.457000 2347 3082 1 chr4B.!!$F1 735
8 TraesCS2A01G306500 chr6B 58829500 58830234 734 True 1336.0 1336 99.457000 2347 3082 1 chr6B.!!$R1 735
9 TraesCS2A01G306500 chr4A 575464401 575465139 738 False 1336.0 1336 99.323000 2347 3084 1 chr4A.!!$F1 737
10 TraesCS2A01G306500 chr1B 451910463 451911197 734 True 1336.0 1336 99.457000 2347 3082 1 chr1B.!!$R1 735
11 TraesCS2A01G306500 chr1A 369457350 369458084 734 True 1336.0 1336 99.457000 2347 3082 1 chr1A.!!$R1 735

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
581 583 0.461870 TGCGTGCTGACAACTTGACT 60.462 50.000 0.00 0.0 0.00 3.41 F
845 848 0.900182 AAGCTAGCAAACAAGCCCCC 60.900 55.000 18.83 0.0 39.64 5.40 F
1554 1593 1.071228 CCGGCCATCAAGATCATCAGA 59.929 52.381 2.24 0.0 0.00 3.27 F
3160 3202 0.598065 AGCGCATTGACCCTTTTCAC 59.402 50.000 11.47 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1554 1593 1.004918 CACGTCGCTCCCTCCTTTT 60.005 57.895 0.00 0.00 0.00 2.27 R
1714 1756 1.202177 GCACAAATGCGGTAGGATGTG 60.202 52.381 0.00 0.00 43.33 3.21 R
3333 3375 0.522915 GAGTAACGACCTCGAAGGCG 60.523 60.000 7.96 7.96 39.63 5.52 R
4493 4541 0.036577 CTGGTCTGAACAGCCCTGAG 60.037 60.000 10.18 0.00 28.42 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 188 0.680921 TGTCATTAAGCAGCCTGGCC 60.681 55.000 16.57 0.00 0.00 5.36
267 268 2.435805 TCCCTGCAGGAATGAGATACAC 59.564 50.000 34.91 0.00 43.78 2.90
581 583 0.461870 TGCGTGCTGACAACTTGACT 60.462 50.000 0.00 0.00 0.00 3.41
636 638 6.154877 TGGACTCGGTGTATAAAGGTGAAATA 59.845 38.462 0.00 0.00 0.00 1.40
637 639 7.147620 TGGACTCGGTGTATAAAGGTGAAATAT 60.148 37.037 0.00 0.00 0.00 1.28
691 693 3.751175 CAGATTTTACGGCTGACTTCCAA 59.249 43.478 0.00 0.00 0.00 3.53
782 785 9.660180 GTAGAAATTGGAAGTAAAGAGACTCAT 57.340 33.333 5.02 0.00 0.00 2.90
820 823 2.376808 AAGTTCAGGAGCATGAGTCG 57.623 50.000 0.00 0.00 0.00 4.18
845 848 0.900182 AAGCTAGCAAACAAGCCCCC 60.900 55.000 18.83 0.00 39.64 5.40
1213 1216 5.677319 TGTTACTCCTTAAGCAGCTATGT 57.323 39.130 0.00 0.00 0.00 2.29
1222 1225 5.395103 CCTTAAGCAGCTATGTTCTGACTCT 60.395 44.000 0.00 0.00 33.54 3.24
1229 1232 3.055094 GCTATGTTCTGACTCTCCCCAAA 60.055 47.826 0.00 0.00 0.00 3.28
1369 1408 4.273235 TGAGACACTGAGACGTACGTTTTA 59.727 41.667 23.70 12.87 0.00 1.52
1425 1464 2.971307 TGATGCATGCAGTACGAGAAA 58.029 42.857 26.69 0.00 0.00 2.52
1554 1593 1.071228 CCGGCCATCAAGATCATCAGA 59.929 52.381 2.24 0.00 0.00 3.27
1714 1756 1.271762 GGGTGGTCCTTGTAAGTTCCC 60.272 57.143 0.00 0.00 0.00 3.97
1825 1867 2.084546 GTCTTGCAGGTGGGTGTATTC 58.915 52.381 0.00 0.00 0.00 1.75
2332 2374 8.974060 TGGAAGAGTTGAACATTTAGTAACTT 57.026 30.769 0.00 0.00 30.97 2.66
2333 2375 9.403583 TGGAAGAGTTGAACATTTAGTAACTTT 57.596 29.630 0.00 0.00 30.97 2.66
2337 2379 9.780186 AGAGTTGAACATTTAGTAACTTTAGCT 57.220 29.630 0.00 0.00 30.97 3.32
2339 2381 9.555727 AGTTGAACATTTAGTAACTTTAGCTCA 57.444 29.630 0.00 0.00 27.12 4.26
3078 3120 4.384940 AGGCTTTGTTGTTGTTGTTGTTT 58.615 34.783 0.00 0.00 0.00 2.83
3079 3121 4.213059 AGGCTTTGTTGTTGTTGTTGTTTG 59.787 37.500 0.00 0.00 0.00 2.93
3160 3202 0.598065 AGCGCATTGACCCTTTTCAC 59.402 50.000 11.47 0.00 0.00 3.18
3165 3207 3.252215 CGCATTGACCCTTTTCACTTGTA 59.748 43.478 0.00 0.00 0.00 2.41
3170 3212 6.573664 TTGACCCTTTTCACTTGTATCATG 57.426 37.500 0.00 0.00 0.00 3.07
3333 3375 1.852067 ATGTTTCAACCGCAGACCGC 61.852 55.000 0.00 0.00 35.03 5.68
3715 3757 3.871006 GTCGTGGCTGACAATATTGATGA 59.129 43.478 22.16 6.44 38.75 2.92
4006 4048 8.999431 GTAGTCCACTTTTCAGTTGATTATTCA 58.001 33.333 0.00 0.00 27.85 2.57
4007 4049 8.641498 AGTCCACTTTTCAGTTGATTATTCAT 57.359 30.769 0.00 0.00 27.85 2.57
4013 4060 9.807649 ACTTTTCAGTTGATTATTCATATTGCC 57.192 29.630 0.00 0.00 0.00 4.52
4048 4095 2.534298 CACTTCTGTGGTAGAGCATCG 58.466 52.381 0.00 0.00 39.49 3.84
4051 4098 1.103803 TCTGTGGTAGAGCATCGTCC 58.896 55.000 0.00 0.00 42.67 4.79
4234 4282 9.730705 ATCATCAGTTTTATCAAGAAGAACAGA 57.269 29.630 0.00 0.00 0.00 3.41
4244 4292 1.499007 AGAAGAACAGAGGGGCCAAAA 59.501 47.619 4.39 0.00 0.00 2.44
4300 4348 5.598830 TGTAGAAGAGGAGGTAACATCATCC 59.401 44.000 0.00 0.00 38.40 3.51
4340 4388 8.289618 CCATTCAAGACGAACTTTAATCAAGAA 58.710 33.333 0.00 0.00 36.12 2.52
4345 4393 9.959775 CAAGACGAACTTTAATCAAGAAGTATC 57.040 33.333 0.00 0.00 35.17 2.24
4404 4452 0.823356 TTGTTCTGGTGCCCTTGCTC 60.823 55.000 0.00 0.00 38.71 4.26
4405 4453 1.228245 GTTCTGGTGCCCTTGCTCA 60.228 57.895 0.00 0.00 38.71 4.26
4415 4463 1.887956 GCCCTTGCTCAGTGAAATCCA 60.888 52.381 0.00 0.00 33.53 3.41
4419 4467 2.254546 TGCTCAGTGAAATCCAACGT 57.745 45.000 0.00 0.00 0.00 3.99
4428 4476 5.681105 CAGTGAAATCCAACGTTTACAAGTG 59.319 40.000 0.00 0.00 0.00 3.16
4442 4490 2.698803 ACAAGTGCATCTATCACGCAA 58.301 42.857 0.00 0.00 39.31 4.85
4466 4514 2.102757 AGCTGAGGATATCACACTGCAG 59.897 50.000 13.48 13.48 33.22 4.41
4473 4521 5.345418 AGGATATCACACTGCAGGGTATAT 58.655 41.667 23.88 22.14 0.00 0.86
4478 4526 3.568430 TCACACTGCAGGGTATATAGACG 59.432 47.826 23.88 6.90 0.00 4.18
4479 4527 3.568430 CACACTGCAGGGTATATAGACGA 59.432 47.826 23.88 0.00 0.00 4.20
4493 4541 2.581354 ACGAGAGTGCAGGATGGC 59.419 61.111 0.00 0.00 46.97 4.40
4494 4542 1.986757 ACGAGAGTGCAGGATGGCT 60.987 57.895 0.00 0.00 46.97 4.75
4495 4543 1.227205 CGAGAGTGCAGGATGGCTC 60.227 63.158 0.00 0.00 35.86 4.70
4496 4544 1.903294 GAGAGTGCAGGATGGCTCA 59.097 57.895 2.98 0.00 35.86 4.26
4497 4545 0.179078 GAGAGTGCAGGATGGCTCAG 60.179 60.000 2.98 0.00 35.86 3.35
4498 4546 1.153208 GAGTGCAGGATGGCTCAGG 60.153 63.158 0.00 0.00 35.86 3.86
4499 4547 2.124403 GTGCAGGATGGCTCAGGG 60.124 66.667 0.00 0.00 35.86 4.45
4500 4548 4.119363 TGCAGGATGGCTCAGGGC 62.119 66.667 0.00 0.00 40.90 5.19
4509 4557 1.376553 GGCTCAGGGCTGTTCAGAC 60.377 63.158 3.84 0.00 41.46 3.51
4517 4565 1.609320 GGGCTGTTCAGACCAGTCTTC 60.609 57.143 18.72 0.00 37.98 2.87
4529 4577 2.364324 ACCAGTCTTCGCTTAGTGACAA 59.636 45.455 0.00 0.00 32.41 3.18
4541 4589 5.220472 CGCTTAGTGACAAACCATACAGATG 60.220 44.000 0.00 0.00 0.00 2.90
4560 4622 1.336702 TGCCGTTGCATTGTGGATTTC 60.337 47.619 0.00 0.00 44.23 2.17
4582 4644 5.324409 TCTGATGCCTAAACACCTTTGAAT 58.676 37.500 0.00 0.00 0.00 2.57
4605 4667 3.459598 TGAATAAGCTTCATGTAGCCCCT 59.540 43.478 19.45 8.26 42.20 4.79
4607 4669 2.426842 AAGCTTCATGTAGCCCCTTC 57.573 50.000 19.45 0.00 42.20 3.46
4609 4671 2.764269 AGCTTCATGTAGCCCCTTCTA 58.236 47.619 19.45 0.00 42.20 2.10
4610 4672 3.321950 AGCTTCATGTAGCCCCTTCTAT 58.678 45.455 19.45 0.00 42.20 1.98
4612 4674 4.907875 AGCTTCATGTAGCCCCTTCTATTA 59.092 41.667 19.45 0.00 42.20 0.98
4616 4679 7.387265 TTCATGTAGCCCCTTCTATTATCAA 57.613 36.000 0.00 0.00 0.00 2.57
4640 4703 4.406456 TCCTATTTTGTGCAATCAGGTGT 58.594 39.130 0.00 0.00 0.00 4.16
4647 4710 6.403866 TTTGTGCAATCAGGTGTCTTATTT 57.596 33.333 0.00 0.00 0.00 1.40
4652 4715 7.392953 TGTGCAATCAGGTGTCTTATTTATGAA 59.607 33.333 0.00 0.00 0.00 2.57
4653 4716 8.408601 GTGCAATCAGGTGTCTTATTTATGAAT 58.591 33.333 0.00 0.00 0.00 2.57
4654 4717 9.625747 TGCAATCAGGTGTCTTATTTATGAATA 57.374 29.630 0.00 0.00 0.00 1.75
4694 4757 5.465390 TGAGGAATTCAACAAAGTAGACACG 59.535 40.000 7.93 0.00 31.34 4.49
4696 4759 5.465724 AGGAATTCAACAAAGTAGACACGAC 59.534 40.000 7.93 0.00 0.00 4.34
4697 4760 5.465724 GGAATTCAACAAAGTAGACACGACT 59.534 40.000 7.93 0.00 0.00 4.18
4748 4811 2.738743 CTTATGAATTGTGCCCACCCT 58.261 47.619 0.00 0.00 0.00 4.34
4749 4812 3.897239 CTTATGAATTGTGCCCACCCTA 58.103 45.455 0.00 0.00 0.00 3.53
4756 4819 0.178975 TGTGCCCACCCTAAACCTTG 60.179 55.000 0.00 0.00 0.00 3.61
4759 4822 1.677633 CCCACCCTAAACCTTGGCG 60.678 63.158 0.00 0.00 0.00 5.69
4763 4826 1.004200 CCCTAAACCTTGGCGACGT 60.004 57.895 0.00 0.00 0.00 4.34
4772 4835 1.079681 TTGGCGACGTCCACCATAC 60.080 57.895 21.86 1.72 35.50 2.39
4773 4836 2.202837 GGCGACGTCCACCATACC 60.203 66.667 15.57 1.08 0.00 2.73
4774 4837 2.581409 GCGACGTCCACCATACCG 60.581 66.667 10.58 0.00 0.00 4.02
4775 4838 3.055080 GCGACGTCCACCATACCGA 62.055 63.158 10.58 0.00 0.00 4.69
4776 4839 1.063649 CGACGTCCACCATACCGAG 59.936 63.158 10.58 0.00 0.00 4.63
4777 4840 1.436336 GACGTCCACCATACCGAGG 59.564 63.158 3.51 0.00 0.00 4.63
4778 4841 2.106332 CGTCCACCATACCGAGGC 59.894 66.667 0.00 0.00 0.00 4.70
4779 4842 2.504519 GTCCACCATACCGAGGCC 59.495 66.667 0.00 0.00 0.00 5.19
4780 4843 2.039787 TCCACCATACCGAGGCCA 59.960 61.111 5.01 0.00 0.00 5.36
4781 4844 2.189521 CCACCATACCGAGGCCAC 59.810 66.667 5.01 0.00 0.00 5.01
4782 4845 2.202878 CACCATACCGAGGCCACG 60.203 66.667 16.33 16.33 0.00 4.94
4783 4846 2.363276 ACCATACCGAGGCCACGA 60.363 61.111 24.92 5.15 35.09 4.35
4784 4847 2.417516 CCATACCGAGGCCACGAG 59.582 66.667 24.92 15.88 35.09 4.18
4785 4848 2.423898 CCATACCGAGGCCACGAGT 61.424 63.158 24.92 20.50 35.09 4.18
4786 4849 1.065928 CATACCGAGGCCACGAGTC 59.934 63.158 24.92 0.77 35.09 3.36
4787 4850 1.379443 ATACCGAGGCCACGAGTCA 60.379 57.895 24.92 6.02 35.09 3.41
4788 4851 1.664321 ATACCGAGGCCACGAGTCAC 61.664 60.000 24.92 0.00 35.09 3.67
4790 4853 3.733960 CGAGGCCACGAGTCACGA 61.734 66.667 18.51 0.00 45.77 4.35
4791 4854 2.179517 GAGGCCACGAGTCACGAG 59.820 66.667 5.01 0.00 45.77 4.18
4792 4855 2.282251 AGGCCACGAGTCACGAGA 60.282 61.111 5.01 0.00 45.77 4.04
4793 4856 2.179517 GGCCACGAGTCACGAGAG 59.820 66.667 0.00 0.00 45.77 3.20
4795 4858 1.286260 GCCACGAGTCACGAGAGTT 59.714 57.895 0.00 0.00 46.40 3.01
4796 4859 0.520404 GCCACGAGTCACGAGAGTTA 59.480 55.000 0.00 0.00 46.40 2.24
4797 4860 1.728502 GCCACGAGTCACGAGAGTTAC 60.729 57.143 0.00 0.00 46.40 2.50
4798 4861 1.534163 CCACGAGTCACGAGAGTTACA 59.466 52.381 0.00 0.00 46.40 2.41
4799 4862 2.031420 CCACGAGTCACGAGAGTTACAA 60.031 50.000 0.00 0.00 46.40 2.41
4800 4863 3.549423 CCACGAGTCACGAGAGTTACAAA 60.549 47.826 0.00 0.00 46.40 2.83
4801 4864 3.421231 CACGAGTCACGAGAGTTACAAAC 59.579 47.826 0.00 0.00 46.40 2.93
4802 4865 2.978489 CGAGTCACGAGAGTTACAAACC 59.022 50.000 0.00 0.00 46.40 3.27
4803 4866 3.549423 CGAGTCACGAGAGTTACAAACCA 60.549 47.826 0.00 0.00 46.40 3.67
4804 4867 4.557205 GAGTCACGAGAGTTACAAACCAT 58.443 43.478 0.00 0.00 46.40 3.55
4805 4868 4.957296 AGTCACGAGAGTTACAAACCATT 58.043 39.130 0.00 0.00 46.40 3.16
4806 4869 4.750098 AGTCACGAGAGTTACAAACCATTG 59.250 41.667 0.00 0.00 46.40 2.82
4807 4870 3.496884 TCACGAGAGTTACAAACCATTGC 59.503 43.478 0.00 0.00 46.40 3.56
4808 4871 3.249799 CACGAGAGTTACAAACCATTGCA 59.750 43.478 0.00 0.00 46.40 4.08
4809 4872 4.072131 ACGAGAGTTACAAACCATTGCAT 58.928 39.130 0.00 0.00 46.40 3.96
4810 4873 4.083324 ACGAGAGTTACAAACCATTGCATG 60.083 41.667 0.00 0.00 46.40 4.06
4811 4874 4.083324 CGAGAGTTACAAACCATTGCATGT 60.083 41.667 0.00 0.00 40.34 3.21
4812 4875 5.562696 CGAGAGTTACAAACCATTGCATGTT 60.563 40.000 0.00 0.00 40.34 2.71
4813 4876 5.772521 AGAGTTACAAACCATTGCATGTTC 58.227 37.500 0.00 0.00 40.34 3.18
4814 4877 5.536161 AGAGTTACAAACCATTGCATGTTCT 59.464 36.000 0.00 0.00 40.34 3.01
4815 4878 5.531634 AGTTACAAACCATTGCATGTTCTG 58.468 37.500 0.00 0.00 40.34 3.02
4816 4879 5.301551 AGTTACAAACCATTGCATGTTCTGA 59.698 36.000 0.00 0.00 40.34 3.27
4817 4880 4.877378 ACAAACCATTGCATGTTCTGAT 57.123 36.364 0.00 0.00 40.34 2.90
4818 4881 5.217978 ACAAACCATTGCATGTTCTGATT 57.782 34.783 0.00 0.00 40.34 2.57
4819 4882 6.343716 ACAAACCATTGCATGTTCTGATTA 57.656 33.333 0.00 0.00 40.34 1.75
4820 4883 6.938507 ACAAACCATTGCATGTTCTGATTAT 58.061 32.000 0.00 0.00 40.34 1.28
4821 4884 7.388437 ACAAACCATTGCATGTTCTGATTATT 58.612 30.769 0.00 0.00 40.34 1.40
4822 4885 7.332430 ACAAACCATTGCATGTTCTGATTATTG 59.668 33.333 0.00 0.00 40.34 1.90
4823 4886 5.909477 ACCATTGCATGTTCTGATTATTGG 58.091 37.500 0.00 0.00 0.00 3.16
4824 4887 5.163385 ACCATTGCATGTTCTGATTATTGGG 60.163 40.000 0.00 0.00 0.00 4.12
4825 4888 5.163385 CCATTGCATGTTCTGATTATTGGGT 60.163 40.000 0.00 0.00 0.00 4.51
4826 4889 4.987408 TGCATGTTCTGATTATTGGGTG 57.013 40.909 0.00 0.00 0.00 4.61
4827 4890 3.700539 TGCATGTTCTGATTATTGGGTGG 59.299 43.478 0.00 0.00 0.00 4.61
4828 4891 3.701040 GCATGTTCTGATTATTGGGTGGT 59.299 43.478 0.00 0.00 0.00 4.16
4829 4892 4.887071 GCATGTTCTGATTATTGGGTGGTA 59.113 41.667 0.00 0.00 0.00 3.25
4830 4893 5.221048 GCATGTTCTGATTATTGGGTGGTAC 60.221 44.000 0.00 0.00 0.00 3.34
4831 4894 4.850680 TGTTCTGATTATTGGGTGGTACC 58.149 43.478 4.43 4.43 37.60 3.34
4832 4895 4.538490 TGTTCTGATTATTGGGTGGTACCT 59.462 41.667 14.36 0.00 38.64 3.08
4833 4896 5.014755 TGTTCTGATTATTGGGTGGTACCTT 59.985 40.000 14.36 0.00 38.64 3.50
4834 4897 6.215841 TGTTCTGATTATTGGGTGGTACCTTA 59.784 38.462 14.36 0.00 38.64 2.69
4835 4898 6.243216 TCTGATTATTGGGTGGTACCTTAC 57.757 41.667 14.36 3.38 38.64 2.34
4850 4913 7.528996 GGTACCTTACCCAACATAACTTTTT 57.471 36.000 4.06 0.00 43.18 1.94
4870 4933 4.751767 TTTTTGAAACTTCACCCTGCAT 57.248 36.364 0.00 0.00 36.83 3.96
4871 4934 5.860941 TTTTTGAAACTTCACCCTGCATA 57.139 34.783 0.00 0.00 36.83 3.14
4872 4935 5.860941 TTTTGAAACTTCACCCTGCATAA 57.139 34.783 0.00 0.00 36.83 1.90
4873 4936 4.846779 TTGAAACTTCACCCTGCATAAC 57.153 40.909 0.00 0.00 36.83 1.89
4874 4937 4.098914 TGAAACTTCACCCTGCATAACT 57.901 40.909 0.00 0.00 31.01 2.24
4875 4938 5.235850 TGAAACTTCACCCTGCATAACTA 57.764 39.130 0.00 0.00 31.01 2.24
4876 4939 5.626142 TGAAACTTCACCCTGCATAACTAA 58.374 37.500 0.00 0.00 31.01 2.24
4877 4940 6.065374 TGAAACTTCACCCTGCATAACTAAA 58.935 36.000 0.00 0.00 31.01 1.85
4878 4941 5.959618 AACTTCACCCTGCATAACTAAAC 57.040 39.130 0.00 0.00 0.00 2.01
4879 4942 4.980573 ACTTCACCCTGCATAACTAAACA 58.019 39.130 0.00 0.00 0.00 2.83
4880 4943 5.003804 ACTTCACCCTGCATAACTAAACAG 58.996 41.667 0.00 0.00 0.00 3.16
4882 4945 3.329520 TCACCCTGCATAACTAAACAGGT 59.670 43.478 7.10 0.00 46.80 4.00
4883 4946 3.440173 CACCCTGCATAACTAAACAGGTG 59.560 47.826 7.10 0.00 46.80 4.00
4884 4947 3.329520 ACCCTGCATAACTAAACAGGTGA 59.670 43.478 7.10 0.00 46.80 4.02
4885 4948 4.018415 ACCCTGCATAACTAAACAGGTGAT 60.018 41.667 7.10 0.00 46.80 3.06
4886 4949 4.949856 CCCTGCATAACTAAACAGGTGATT 59.050 41.667 7.10 0.00 46.80 2.57
4887 4950 5.418840 CCCTGCATAACTAAACAGGTGATTT 59.581 40.000 7.10 0.00 46.80 2.17
4888 4951 6.071391 CCCTGCATAACTAAACAGGTGATTTT 60.071 38.462 7.10 0.00 46.80 1.82
4889 4952 7.029563 CCTGCATAACTAAACAGGTGATTTTC 58.970 38.462 0.00 0.00 43.86 2.29
4890 4953 6.607689 TGCATAACTAAACAGGTGATTTTCG 58.392 36.000 0.00 0.00 0.00 3.46
4891 4954 6.205853 TGCATAACTAAACAGGTGATTTTCGT 59.794 34.615 0.00 0.00 0.00 3.85
4892 4955 7.081976 GCATAACTAAACAGGTGATTTTCGTT 58.918 34.615 0.00 0.00 0.00 3.85
4893 4956 8.231837 GCATAACTAAACAGGTGATTTTCGTTA 58.768 33.333 0.00 0.00 0.00 3.18
4894 4957 9.755064 CATAACTAAACAGGTGATTTTCGTTAG 57.245 33.333 0.00 0.00 0.00 2.34
4895 4958 6.237313 ACTAAACAGGTGATTTTCGTTAGC 57.763 37.500 0.00 0.00 0.00 3.09
4896 4959 4.499037 AAACAGGTGATTTTCGTTAGCC 57.501 40.909 0.00 0.00 0.00 3.93
4897 4960 3.418684 ACAGGTGATTTTCGTTAGCCT 57.581 42.857 0.00 0.00 0.00 4.58
4898 4961 4.546829 ACAGGTGATTTTCGTTAGCCTA 57.453 40.909 0.00 0.00 0.00 3.93
4899 4962 5.099042 ACAGGTGATTTTCGTTAGCCTAT 57.901 39.130 0.00 0.00 0.00 2.57
4900 4963 5.497474 ACAGGTGATTTTCGTTAGCCTATT 58.503 37.500 0.00 0.00 0.00 1.73
4901 4964 5.944007 ACAGGTGATTTTCGTTAGCCTATTT 59.056 36.000 0.00 0.00 0.00 1.40
4902 4965 6.093633 ACAGGTGATTTTCGTTAGCCTATTTC 59.906 38.462 0.00 0.00 0.00 2.17
4903 4966 6.316390 CAGGTGATTTTCGTTAGCCTATTTCT 59.684 38.462 0.00 0.00 0.00 2.52
4904 4967 6.539103 AGGTGATTTTCGTTAGCCTATTTCTC 59.461 38.462 0.00 0.00 0.00 2.87
4905 4968 6.539103 GGTGATTTTCGTTAGCCTATTTCTCT 59.461 38.462 0.00 0.00 0.00 3.10
4906 4969 7.065923 GGTGATTTTCGTTAGCCTATTTCTCTT 59.934 37.037 0.00 0.00 0.00 2.85
4907 4970 9.095065 GTGATTTTCGTTAGCCTATTTCTCTTA 57.905 33.333 0.00 0.00 0.00 2.10
4908 4971 9.314321 TGATTTTCGTTAGCCTATTTCTCTTAG 57.686 33.333 0.00 0.00 0.00 2.18
4909 4972 7.535489 TTTTCGTTAGCCTATTTCTCTTAGC 57.465 36.000 0.00 0.00 0.00 3.09
4910 4973 5.847111 TCGTTAGCCTATTTCTCTTAGCA 57.153 39.130 0.00 0.00 0.00 3.49
4911 4974 6.406692 TCGTTAGCCTATTTCTCTTAGCAT 57.593 37.500 0.00 0.00 0.00 3.79
4912 4975 6.216569 TCGTTAGCCTATTTCTCTTAGCATG 58.783 40.000 0.00 0.00 0.00 4.06
4913 4976 5.107298 CGTTAGCCTATTTCTCTTAGCATGC 60.107 44.000 10.51 10.51 0.00 4.06
4914 4977 4.428294 AGCCTATTTCTCTTAGCATGCA 57.572 40.909 21.98 2.77 0.00 3.96
4915 4978 4.785301 AGCCTATTTCTCTTAGCATGCAA 58.215 39.130 21.98 11.13 0.00 4.08
4916 4979 5.195940 AGCCTATTTCTCTTAGCATGCAAA 58.804 37.500 21.98 10.74 0.00 3.68
4917 4980 5.832060 AGCCTATTTCTCTTAGCATGCAAAT 59.168 36.000 21.98 17.01 0.00 2.32
4918 4981 7.000472 AGCCTATTTCTCTTAGCATGCAAATA 59.000 34.615 21.98 17.21 0.00 1.40
4919 4982 7.668886 AGCCTATTTCTCTTAGCATGCAAATAT 59.331 33.333 21.98 0.16 0.00 1.28
4920 4983 7.754027 GCCTATTTCTCTTAGCATGCAAATATG 59.246 37.037 21.98 15.92 0.00 1.78
4921 4984 9.006839 CCTATTTCTCTTAGCATGCAAATATGA 57.993 33.333 21.98 10.18 0.00 2.15
4922 4985 9.823098 CTATTTCTCTTAGCATGCAAATATGAC 57.177 33.333 21.98 0.00 0.00 3.06
4923 4986 7.628769 TTTCTCTTAGCATGCAAATATGACA 57.371 32.000 21.98 1.18 0.00 3.58
4924 4987 6.609237 TCTCTTAGCATGCAAATATGACAC 57.391 37.500 21.98 0.00 0.00 3.67
4925 4988 5.528690 TCTCTTAGCATGCAAATATGACACC 59.471 40.000 21.98 0.00 0.00 4.16
4926 4989 5.439721 TCTTAGCATGCAAATATGACACCT 58.560 37.500 21.98 0.00 0.00 4.00
4927 4990 5.528690 TCTTAGCATGCAAATATGACACCTC 59.471 40.000 21.98 0.00 0.00 3.85
4928 4991 3.623703 AGCATGCAAATATGACACCTCA 58.376 40.909 21.98 0.00 0.00 3.86
4929 4992 4.018490 AGCATGCAAATATGACACCTCAA 58.982 39.130 21.98 0.00 0.00 3.02
4930 4993 4.463539 AGCATGCAAATATGACACCTCAAA 59.536 37.500 21.98 0.00 0.00 2.69
4931 4994 5.047164 AGCATGCAAATATGACACCTCAAAA 60.047 36.000 21.98 0.00 0.00 2.44
4932 4995 5.813672 GCATGCAAATATGACACCTCAAAAT 59.186 36.000 14.21 0.00 0.00 1.82
4933 4996 6.237996 GCATGCAAATATGACACCTCAAAATG 60.238 38.462 14.21 0.00 0.00 2.32
4934 4997 5.170021 TGCAAATATGACACCTCAAAATGC 58.830 37.500 0.00 0.00 0.00 3.56
4935 4998 5.170021 GCAAATATGACACCTCAAAATGCA 58.830 37.500 0.00 0.00 31.36 3.96
4936 4999 5.638657 GCAAATATGACACCTCAAAATGCAA 59.361 36.000 0.00 0.00 31.36 4.08
4937 5000 6.401367 GCAAATATGACACCTCAAAATGCAAC 60.401 38.462 0.00 0.00 31.36 4.17
4938 5001 6.594788 AATATGACACCTCAAAATGCAACT 57.405 33.333 0.00 0.00 0.00 3.16
4939 5002 4.942761 ATGACACCTCAAAATGCAACTT 57.057 36.364 0.00 0.00 0.00 2.66
4940 5003 4.044336 TGACACCTCAAAATGCAACTTG 57.956 40.909 0.00 0.00 0.00 3.16
4941 5004 3.446873 TGACACCTCAAAATGCAACTTGT 59.553 39.130 10.06 0.00 0.00 3.16
4942 5005 4.642437 TGACACCTCAAAATGCAACTTGTA 59.358 37.500 10.06 0.00 0.00 2.41
4943 5006 5.301551 TGACACCTCAAAATGCAACTTGTAT 59.698 36.000 10.06 0.00 0.00 2.29
4944 5007 5.531634 ACACCTCAAAATGCAACTTGTATG 58.468 37.500 10.06 9.34 0.00 2.39
4945 5008 4.925054 CACCTCAAAATGCAACTTGTATGG 59.075 41.667 10.06 12.01 0.00 2.74
4946 5009 4.588528 ACCTCAAAATGCAACTTGTATGGT 59.411 37.500 10.06 12.46 0.00 3.55
4947 5010 5.772672 ACCTCAAAATGCAACTTGTATGGTA 59.227 36.000 16.31 0.00 0.00 3.25
4948 5011 6.266558 ACCTCAAAATGCAACTTGTATGGTAA 59.733 34.615 16.31 0.00 0.00 2.85
4949 5012 7.151308 CCTCAAAATGCAACTTGTATGGTAAA 58.849 34.615 10.06 0.00 0.00 2.01
4950 5013 7.655328 CCTCAAAATGCAACTTGTATGGTAAAA 59.345 33.333 10.06 0.00 0.00 1.52
4951 5014 9.206870 CTCAAAATGCAACTTGTATGGTAAAAT 57.793 29.630 10.06 0.00 0.00 1.82
4952 5015 8.986847 TCAAAATGCAACTTGTATGGTAAAATG 58.013 29.630 10.06 0.00 0.00 2.32
4953 5016 6.966435 AATGCAACTTGTATGGTAAAATGC 57.034 33.333 0.00 0.00 0.00 3.56
4954 5017 5.459536 TGCAACTTGTATGGTAAAATGCA 57.540 34.783 0.00 0.00 38.78 3.96
4955 5018 5.226396 TGCAACTTGTATGGTAAAATGCAC 58.774 37.500 0.00 0.00 36.46 4.57
4956 5019 5.221322 TGCAACTTGTATGGTAAAATGCACA 60.221 36.000 0.00 0.00 36.46 4.57
4957 5020 5.345741 GCAACTTGTATGGTAAAATGCACAG 59.654 40.000 0.00 0.00 0.00 3.66
4958 5021 5.059404 ACTTGTATGGTAAAATGCACAGC 57.941 39.130 0.00 0.00 0.00 4.40
4959 5022 4.766891 ACTTGTATGGTAAAATGCACAGCT 59.233 37.500 0.00 0.00 0.00 4.24
4960 5023 4.963276 TGTATGGTAAAATGCACAGCTC 57.037 40.909 0.00 0.00 0.00 4.09
4961 5024 4.331108 TGTATGGTAAAATGCACAGCTCA 58.669 39.130 0.00 0.00 0.00 4.26
4962 5025 4.764308 TGTATGGTAAAATGCACAGCTCAA 59.236 37.500 0.00 0.00 0.00 3.02
4963 5026 3.641437 TGGTAAAATGCACAGCTCAAC 57.359 42.857 0.00 0.00 0.00 3.18
4964 5027 2.954989 TGGTAAAATGCACAGCTCAACA 59.045 40.909 0.00 0.00 0.00 3.33
4965 5028 3.573538 TGGTAAAATGCACAGCTCAACAT 59.426 39.130 0.00 0.00 0.00 2.71
4966 5029 3.922240 GGTAAAATGCACAGCTCAACATG 59.078 43.478 0.00 0.00 0.00 3.21
4967 5030 2.074547 AAATGCACAGCTCAACATGC 57.925 45.000 0.00 0.00 38.59 4.06
4968 5031 4.160928 TGCACAGCTCAACATGCA 57.839 50.000 0.00 0.00 45.45 3.96
4969 5032 2.416901 TGCACAGCTCAACATGCAA 58.583 47.368 0.00 0.00 44.72 4.08
4970 5033 0.745468 TGCACAGCTCAACATGCAAA 59.255 45.000 0.00 0.00 44.72 3.68
4971 5034 1.134226 GCACAGCTCAACATGCAAAC 58.866 50.000 0.00 0.00 38.00 2.93
4972 5035 1.536496 GCACAGCTCAACATGCAAACA 60.536 47.619 0.00 0.00 38.00 2.83
4973 5036 2.864882 GCACAGCTCAACATGCAAACAT 60.865 45.455 0.00 0.00 38.00 2.71
4974 5037 3.612241 GCACAGCTCAACATGCAAACATA 60.612 43.478 0.00 0.00 38.00 2.29
4975 5038 3.916172 CACAGCTCAACATGCAAACATAC 59.084 43.478 0.00 0.00 33.67 2.39
4976 5039 3.569277 ACAGCTCAACATGCAAACATACA 59.431 39.130 0.00 0.00 33.67 2.29
4977 5040 4.219070 ACAGCTCAACATGCAAACATACAT 59.781 37.500 0.00 0.00 33.67 2.29
4979 5042 3.861113 GCTCAACATGCAAACATACATGG 59.139 43.478 7.78 0.00 46.35 3.66
4980 5043 4.426416 CTCAACATGCAAACATACATGGG 58.574 43.478 7.78 0.46 46.35 4.00
4981 5044 4.085009 TCAACATGCAAACATACATGGGA 58.915 39.130 7.78 2.60 46.35 4.37
4982 5045 4.525874 TCAACATGCAAACATACATGGGAA 59.474 37.500 7.78 0.00 46.35 3.97
4983 5046 5.011431 TCAACATGCAAACATACATGGGAAA 59.989 36.000 7.78 0.00 46.35 3.13
4984 5047 5.480642 ACATGCAAACATACATGGGAAAA 57.519 34.783 7.78 0.00 46.35 2.29
4985 5048 6.052405 ACATGCAAACATACATGGGAAAAT 57.948 33.333 7.78 0.00 46.35 1.82
4986 5049 7.180322 ACATGCAAACATACATGGGAAAATA 57.820 32.000 7.78 0.00 46.35 1.40
4987 5050 7.041107 ACATGCAAACATACATGGGAAAATAC 58.959 34.615 7.78 0.00 46.35 1.89
4988 5051 5.971763 TGCAAACATACATGGGAAAATACC 58.028 37.500 0.00 0.00 0.00 2.73
4989 5052 6.407979 ATGCAAACATACATGGGAAAATACCC 60.408 38.462 0.00 0.00 41.75 3.69
5003 5066 7.764141 GGAAAATACCCACCTTAACTTACAA 57.236 36.000 0.00 0.00 0.00 2.41
5004 5067 7.596494 GGAAAATACCCACCTTAACTTACAAC 58.404 38.462 0.00 0.00 0.00 3.32
5005 5068 7.309377 GGAAAATACCCACCTTAACTTACAACC 60.309 40.741 0.00 0.00 0.00 3.77
5006 5069 5.846528 ATACCCACCTTAACTTACAACCA 57.153 39.130 0.00 0.00 0.00 3.67
5007 5070 4.734843 ACCCACCTTAACTTACAACCAT 57.265 40.909 0.00 0.00 0.00 3.55
5008 5071 4.403734 ACCCACCTTAACTTACAACCATG 58.596 43.478 0.00 0.00 0.00 3.66
5009 5072 3.192633 CCCACCTTAACTTACAACCATGC 59.807 47.826 0.00 0.00 0.00 4.06
5010 5073 3.823873 CCACCTTAACTTACAACCATGCA 59.176 43.478 0.00 0.00 0.00 3.96
5011 5074 4.462483 CCACCTTAACTTACAACCATGCAT 59.538 41.667 0.00 0.00 0.00 3.96
5012 5075 5.047377 CCACCTTAACTTACAACCATGCATT 60.047 40.000 0.00 0.00 0.00 3.56
5013 5076 5.863397 CACCTTAACTTACAACCATGCATTG 59.137 40.000 0.00 0.00 0.00 2.82
5031 5094 9.763465 CATGCATTGGAAAAGATTTTCAATTAC 57.237 29.630 17.31 8.23 46.34 1.89
5032 5095 8.899427 TGCATTGGAAAAGATTTTCAATTACA 57.101 26.923 17.31 10.17 46.34 2.41
5033 5096 9.504708 TGCATTGGAAAAGATTTTCAATTACAT 57.495 25.926 17.31 0.00 46.34 2.29
5155 5218 9.952030 TCAATCTAATTGTGTTCTATACAACCA 57.048 29.630 0.00 0.00 40.47 3.67
5186 5249 9.941325 TTATTGCAATACATTCAAACCAAATCT 57.059 25.926 18.70 0.00 0.00 2.40
5187 5250 8.851541 ATTGCAATACATTCAAACCAAATCTT 57.148 26.923 11.02 0.00 0.00 2.40
5188 5251 7.655236 TGCAATACATTCAAACCAAATCTTG 57.345 32.000 0.00 0.00 0.00 3.02
5189 5252 7.215789 TGCAATACATTCAAACCAAATCTTGT 58.784 30.769 0.00 0.00 0.00 3.16
5190 5253 8.363390 TGCAATACATTCAAACCAAATCTTGTA 58.637 29.630 0.00 0.00 0.00 2.41
5191 5254 8.863049 GCAATACATTCAAACCAAATCTTGTAG 58.137 33.333 0.00 0.00 0.00 2.74
5194 5257 7.823745 ACATTCAAACCAAATCTTGTAGAGT 57.176 32.000 0.00 0.00 0.00 3.24
5195 5258 7.651808 ACATTCAAACCAAATCTTGTAGAGTG 58.348 34.615 0.00 0.00 0.00 3.51
5196 5259 5.689383 TCAAACCAAATCTTGTAGAGTGC 57.311 39.130 0.00 0.00 0.00 4.40
5197 5260 5.129634 TCAAACCAAATCTTGTAGAGTGCA 58.870 37.500 0.00 0.00 0.00 4.57
5198 5261 5.769662 TCAAACCAAATCTTGTAGAGTGCAT 59.230 36.000 0.00 0.00 0.00 3.96
5199 5262 5.633830 AACCAAATCTTGTAGAGTGCATG 57.366 39.130 0.00 0.00 0.00 4.06
5200 5263 4.012374 ACCAAATCTTGTAGAGTGCATGG 58.988 43.478 0.00 0.00 0.00 3.66
5201 5264 4.263462 ACCAAATCTTGTAGAGTGCATGGA 60.263 41.667 1.36 0.00 0.00 3.41
5202 5265 4.334759 CCAAATCTTGTAGAGTGCATGGAG 59.665 45.833 0.00 0.00 0.00 3.86
5203 5266 3.834489 ATCTTGTAGAGTGCATGGAGG 57.166 47.619 0.00 0.00 0.00 4.30
5204 5267 1.833630 TCTTGTAGAGTGCATGGAGGG 59.166 52.381 0.00 0.00 0.00 4.30
5205 5268 1.556911 CTTGTAGAGTGCATGGAGGGT 59.443 52.381 0.00 0.00 0.00 4.34
5206 5269 0.904649 TGTAGAGTGCATGGAGGGTG 59.095 55.000 0.00 0.00 0.00 4.61
5207 5270 0.462759 GTAGAGTGCATGGAGGGTGC 60.463 60.000 0.00 0.00 42.81 5.01
5214 5277 3.751202 ATGGAGGGTGCATGAGCT 58.249 55.556 0.00 0.00 42.74 4.09
5215 5278 1.530771 ATGGAGGGTGCATGAGCTC 59.469 57.895 6.82 6.82 42.74 4.09
5216 5279 1.276859 ATGGAGGGTGCATGAGCTCA 61.277 55.000 20.79 20.79 42.74 4.26
5217 5280 1.300963 GGAGGGTGCATGAGCTCAA 59.699 57.895 22.50 0.40 42.74 3.02
5218 5281 0.322816 GGAGGGTGCATGAGCTCAAA 60.323 55.000 22.50 6.77 42.74 2.69
5219 5282 1.538047 GAGGGTGCATGAGCTCAAAA 58.462 50.000 22.50 6.37 42.74 2.44
5220 5283 1.471684 GAGGGTGCATGAGCTCAAAAG 59.528 52.381 22.50 14.64 42.74 2.27
5221 5284 1.202976 AGGGTGCATGAGCTCAAAAGT 60.203 47.619 22.50 0.00 42.74 2.66
5222 5285 1.615392 GGGTGCATGAGCTCAAAAGTT 59.385 47.619 22.50 0.00 42.74 2.66
5223 5286 2.036346 GGGTGCATGAGCTCAAAAGTTT 59.964 45.455 22.50 0.00 42.74 2.66
5224 5287 3.311966 GGTGCATGAGCTCAAAAGTTTC 58.688 45.455 22.50 7.65 42.74 2.78
5225 5288 3.311966 GTGCATGAGCTCAAAAGTTTCC 58.688 45.455 22.50 3.70 42.74 3.13
5226 5289 3.005155 GTGCATGAGCTCAAAAGTTTCCT 59.995 43.478 22.50 0.00 42.74 3.36
5227 5290 3.254166 TGCATGAGCTCAAAAGTTTCCTC 59.746 43.478 22.50 1.03 42.74 3.71
5228 5291 3.366781 GCATGAGCTCAAAAGTTTCCTCC 60.367 47.826 22.50 0.00 37.91 4.30
5229 5292 3.864789 TGAGCTCAAAAGTTTCCTCCT 57.135 42.857 15.67 0.00 0.00 3.69
5230 5293 4.974645 TGAGCTCAAAAGTTTCCTCCTA 57.025 40.909 15.67 0.00 0.00 2.94
5231 5294 5.304686 TGAGCTCAAAAGTTTCCTCCTAA 57.695 39.130 15.67 0.00 0.00 2.69
5232 5295 5.690865 TGAGCTCAAAAGTTTCCTCCTAAA 58.309 37.500 15.67 0.00 0.00 1.85
5233 5296 5.531287 TGAGCTCAAAAGTTTCCTCCTAAAC 59.469 40.000 15.67 0.00 39.22 2.01
5234 5297 4.827835 AGCTCAAAAGTTTCCTCCTAAACC 59.172 41.667 0.00 0.00 39.66 3.27
5235 5298 4.022242 GCTCAAAAGTTTCCTCCTAAACCC 60.022 45.833 0.00 0.00 39.66 4.11
5236 5299 5.132043 TCAAAAGTTTCCTCCTAAACCCA 57.868 39.130 0.00 0.00 39.66 4.51
5237 5300 4.891168 TCAAAAGTTTCCTCCTAAACCCAC 59.109 41.667 0.00 0.00 39.66 4.61
5238 5301 4.808767 AAAGTTTCCTCCTAAACCCACT 57.191 40.909 0.00 0.00 39.66 4.00
5239 5302 4.808767 AAGTTTCCTCCTAAACCCACTT 57.191 40.909 0.00 0.00 39.66 3.16
5240 5303 4.808767 AGTTTCCTCCTAAACCCACTTT 57.191 40.909 0.00 0.00 39.66 2.66
5241 5304 5.138758 AGTTTCCTCCTAAACCCACTTTT 57.861 39.130 0.00 0.00 39.66 2.27
5242 5305 4.893524 AGTTTCCTCCTAAACCCACTTTTG 59.106 41.667 0.00 0.00 39.66 2.44
5243 5306 3.518992 TCCTCCTAAACCCACTTTTGG 57.481 47.619 0.00 0.00 43.50 3.28
5254 5317 3.726291 CCACTTTTGGGTGTTTGGTAG 57.274 47.619 0.00 0.00 39.57 3.18
5255 5318 2.223947 CCACTTTTGGGTGTTTGGTAGC 60.224 50.000 0.00 0.00 39.57 3.58
5256 5319 2.693074 CACTTTTGGGTGTTTGGTAGCT 59.307 45.455 0.00 0.00 33.04 3.32
5257 5320 3.132111 CACTTTTGGGTGTTTGGTAGCTT 59.868 43.478 0.00 0.00 33.04 3.74
5258 5321 3.132111 ACTTTTGGGTGTTTGGTAGCTTG 59.868 43.478 0.00 0.00 0.00 4.01
5259 5322 1.036707 TTGGGTGTTTGGTAGCTTGC 58.963 50.000 0.00 0.00 0.00 4.01
5260 5323 0.106469 TGGGTGTTTGGTAGCTTGCA 60.106 50.000 0.00 0.00 0.00 4.08
5261 5324 0.313987 GGGTGTTTGGTAGCTTGCAC 59.686 55.000 0.00 0.00 0.00 4.57
5262 5325 0.040425 GGTGTTTGGTAGCTTGCACG 60.040 55.000 0.00 0.00 0.00 5.34
5263 5326 0.040425 GTGTTTGGTAGCTTGCACGG 60.040 55.000 0.00 0.00 0.00 4.94
5264 5327 1.169661 TGTTTGGTAGCTTGCACGGG 61.170 55.000 0.00 0.00 0.00 5.28
5265 5328 2.265182 TTTGGTAGCTTGCACGGGC 61.265 57.895 0.34 0.34 41.68 6.13
5266 5329 4.715523 TGGTAGCTTGCACGGGCC 62.716 66.667 7.46 0.00 40.13 5.80
5267 5330 4.410400 GGTAGCTTGCACGGGCCT 62.410 66.667 7.46 0.00 40.13 5.19
5268 5331 3.127533 GTAGCTTGCACGGGCCTG 61.128 66.667 11.02 11.02 40.13 4.85
5269 5332 3.636231 TAGCTTGCACGGGCCTGT 61.636 61.111 12.85 12.85 40.13 4.00
5270 5333 3.190738 TAGCTTGCACGGGCCTGTT 62.191 57.895 16.73 1.21 40.13 3.16
5271 5334 4.043200 GCTTGCACGGGCCTGTTC 62.043 66.667 16.73 11.79 40.13 3.18
5272 5335 2.594303 CTTGCACGGGCCTGTTCA 60.594 61.111 16.73 14.99 40.13 3.18
5273 5336 2.124109 TTGCACGGGCCTGTTCAA 60.124 55.556 23.75 23.75 40.13 2.69
5274 5337 2.406452 CTTGCACGGGCCTGTTCAAC 62.406 60.000 23.75 10.72 40.13 3.18
5275 5338 2.904866 GCACGGGCCTGTTCAACA 60.905 61.111 16.73 0.00 0.00 3.33
5276 5339 2.268076 GCACGGGCCTGTTCAACAT 61.268 57.895 16.73 0.00 0.00 2.71
5277 5340 1.580942 CACGGGCCTGTTCAACATG 59.419 57.895 16.73 0.00 0.00 3.21
5278 5341 2.268076 ACGGGCCTGTTCAACATGC 61.268 57.895 12.85 9.17 38.72 4.06
5279 5342 2.267351 CGGGCCTGTTCAACATGCA 61.267 57.895 18.17 0.00 40.76 3.96
5280 5343 1.588082 GGGCCTGTTCAACATGCAG 59.412 57.895 18.17 0.00 40.76 4.41
5285 5348 1.531423 CTGTTCAACATGCAGGAGCT 58.469 50.000 4.84 0.00 42.74 4.09
5286 5349 1.467734 CTGTTCAACATGCAGGAGCTC 59.532 52.381 4.84 4.71 42.74 4.09
5287 5350 0.445436 GTTCAACATGCAGGAGCTCG 59.555 55.000 4.84 0.00 42.74 5.03
5288 5351 0.674581 TTCAACATGCAGGAGCTCGG 60.675 55.000 4.84 3.46 42.74 4.63
5289 5352 2.437359 AACATGCAGGAGCTCGGC 60.437 61.111 18.93 18.93 42.74 5.54
5290 5353 3.984193 AACATGCAGGAGCTCGGCC 62.984 63.158 21.76 4.27 42.74 6.13
5294 5357 4.722700 GCAGGAGCTCGGCCCAAA 62.723 66.667 15.89 0.00 37.91 3.28
5295 5358 2.273449 CAGGAGCTCGGCCCAAAT 59.727 61.111 7.83 0.00 0.00 2.32
5296 5359 1.526887 CAGGAGCTCGGCCCAAATA 59.473 57.895 7.83 0.00 0.00 1.40
5297 5360 0.815615 CAGGAGCTCGGCCCAAATAC 60.816 60.000 7.83 0.00 0.00 1.89
5298 5361 1.526225 GGAGCTCGGCCCAAATACC 60.526 63.158 7.83 0.00 0.00 2.73
5299 5362 1.527370 GAGCTCGGCCCAAATACCT 59.473 57.895 0.00 0.00 0.00 3.08
5300 5363 0.107165 GAGCTCGGCCCAAATACCTT 60.107 55.000 0.00 0.00 0.00 3.50
5301 5364 0.107165 AGCTCGGCCCAAATACCTTC 60.107 55.000 0.00 0.00 0.00 3.46
5302 5365 0.107165 GCTCGGCCCAAATACCTTCT 60.107 55.000 0.00 0.00 0.00 2.85
5303 5366 1.682087 GCTCGGCCCAAATACCTTCTT 60.682 52.381 0.00 0.00 0.00 2.52
5304 5367 2.420967 GCTCGGCCCAAATACCTTCTTA 60.421 50.000 0.00 0.00 0.00 2.10
5305 5368 3.467803 CTCGGCCCAAATACCTTCTTAG 58.532 50.000 0.00 0.00 0.00 2.18
5306 5369 1.947456 CGGCCCAAATACCTTCTTAGC 59.053 52.381 0.00 0.00 0.00 3.09
5307 5370 2.682563 CGGCCCAAATACCTTCTTAGCA 60.683 50.000 0.00 0.00 0.00 3.49
5308 5371 2.688446 GGCCCAAATACCTTCTTAGCAC 59.312 50.000 0.00 0.00 0.00 4.40
5309 5372 2.354821 GCCCAAATACCTTCTTAGCACG 59.645 50.000 0.00 0.00 0.00 5.34
5310 5373 3.869065 CCCAAATACCTTCTTAGCACGA 58.131 45.455 0.00 0.00 0.00 4.35
5311 5374 4.258543 CCCAAATACCTTCTTAGCACGAA 58.741 43.478 0.00 0.00 0.00 3.85
5312 5375 4.332819 CCCAAATACCTTCTTAGCACGAAG 59.667 45.833 0.00 3.50 38.05 3.79
5313 5376 5.175859 CCAAATACCTTCTTAGCACGAAGA 58.824 41.667 10.17 2.19 40.15 2.87
5314 5377 5.292101 CCAAATACCTTCTTAGCACGAAGAG 59.708 44.000 10.17 4.74 40.15 2.85
5315 5378 5.916661 AATACCTTCTTAGCACGAAGAGA 57.083 39.130 10.17 0.71 40.15 3.10
5316 5379 3.859411 ACCTTCTTAGCACGAAGAGAG 57.141 47.619 10.17 5.36 40.15 3.20
5317 5380 3.422796 ACCTTCTTAGCACGAAGAGAGA 58.577 45.455 10.17 0.00 40.15 3.10
5318 5381 3.827302 ACCTTCTTAGCACGAAGAGAGAA 59.173 43.478 10.17 0.00 40.15 2.87
5319 5382 4.170256 CCTTCTTAGCACGAAGAGAGAAC 58.830 47.826 10.17 0.00 40.15 3.01
5320 5383 4.321304 CCTTCTTAGCACGAAGAGAGAACA 60.321 45.833 10.17 0.00 40.15 3.18
5321 5384 4.162096 TCTTAGCACGAAGAGAGAACAC 57.838 45.455 0.00 0.00 31.72 3.32
5322 5385 3.057456 TCTTAGCACGAAGAGAGAACACC 60.057 47.826 0.00 0.00 31.72 4.16
5323 5386 0.318762 AGCACGAAGAGAGAACACCC 59.681 55.000 0.00 0.00 0.00 4.61
5324 5387 0.670854 GCACGAAGAGAGAACACCCC 60.671 60.000 0.00 0.00 0.00 4.95
5325 5388 0.679505 CACGAAGAGAGAACACCCCA 59.320 55.000 0.00 0.00 0.00 4.96
5326 5389 1.070134 CACGAAGAGAGAACACCCCAA 59.930 52.381 0.00 0.00 0.00 4.12
5327 5390 1.070289 ACGAAGAGAGAACACCCCAAC 59.930 52.381 0.00 0.00 0.00 3.77
5328 5391 1.070134 CGAAGAGAGAACACCCCAACA 59.930 52.381 0.00 0.00 0.00 3.33
5329 5392 2.484770 CGAAGAGAGAACACCCCAACAA 60.485 50.000 0.00 0.00 0.00 2.83
5330 5393 3.756117 GAAGAGAGAACACCCCAACAAT 58.244 45.455 0.00 0.00 0.00 2.71
5331 5394 3.425162 AGAGAGAACACCCCAACAATC 57.575 47.619 0.00 0.00 0.00 2.67
5332 5395 2.076863 GAGAGAACACCCCAACAATCG 58.923 52.381 0.00 0.00 0.00 3.34
5333 5396 1.420138 AGAGAACACCCCAACAATCGT 59.580 47.619 0.00 0.00 0.00 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 188 4.302455 CTGCCTATCTCAATCCAACTACG 58.698 47.826 0.00 0.00 0.00 3.51
267 268 6.128607 GCATCTGAATGATTCTCAAGGTATCG 60.129 42.308 6.73 0.00 34.61 2.92
679 681 9.736023 CAGTTATTTTATAATTGGAAGTCAGCC 57.264 33.333 0.00 0.00 0.00 4.85
763 765 9.436957 GACAATAATGAGTCTCTTTACTTCCAA 57.563 33.333 9.69 0.00 0.00 3.53
798 801 3.406764 GACTCATGCTCCTGAACTTTGT 58.593 45.455 0.00 0.00 0.00 2.83
820 823 3.120025 GGCTTGTTTGCTAGCTTCTCTTC 60.120 47.826 17.23 0.61 41.90 2.87
845 848 2.697751 AGGGATCTCGAGGAAGTCAATG 59.302 50.000 13.56 0.00 0.00 2.82
1213 1216 1.916181 GGGATTTGGGGAGAGTCAGAA 59.084 52.381 0.00 0.00 0.00 3.02
1222 1225 2.324541 CACTGTTTTGGGATTTGGGGA 58.675 47.619 0.00 0.00 0.00 4.81
1369 1408 5.875910 CACACATAAATGGCATGGACAAATT 59.124 36.000 0.00 0.00 0.00 1.82
1554 1593 1.004918 CACGTCGCTCCCTCCTTTT 60.005 57.895 0.00 0.00 0.00 2.27
1598 1637 1.410648 GGTACTCCACGATACCCTCCA 60.411 57.143 0.00 0.00 35.71 3.86
1714 1756 1.202177 GCACAAATGCGGTAGGATGTG 60.202 52.381 0.00 0.00 43.33 3.21
1735 1777 6.056090 AGATTAAGGAAAGAGAGGTGAACC 57.944 41.667 0.00 0.00 0.00 3.62
1825 1867 3.012518 CTCAATACCAGCAAACTCAGGG 58.987 50.000 0.00 0.00 0.00 4.45
2332 2374 7.119699 CACACATCAGGTAAAGAATTGAGCTAA 59.880 37.037 0.00 0.00 0.00 3.09
2333 2375 6.595326 CACACATCAGGTAAAGAATTGAGCTA 59.405 38.462 0.00 0.00 0.00 3.32
2334 2376 5.413833 CACACATCAGGTAAAGAATTGAGCT 59.586 40.000 0.00 0.00 0.00 4.09
2335 2377 5.392380 CCACACATCAGGTAAAGAATTGAGC 60.392 44.000 0.00 0.00 0.00 4.26
2336 2378 5.707298 ACCACACATCAGGTAAAGAATTGAG 59.293 40.000 0.00 0.00 36.07 3.02
2337 2379 5.630121 ACCACACATCAGGTAAAGAATTGA 58.370 37.500 0.00 0.00 36.07 2.57
2338 2380 5.964958 ACCACACATCAGGTAAAGAATTG 57.035 39.130 0.00 0.00 36.07 2.32
2339 2381 6.549364 TGAAACCACACATCAGGTAAAGAATT 59.451 34.615 0.00 0.00 37.07 2.17
2340 2382 6.068010 TGAAACCACACATCAGGTAAAGAAT 58.932 36.000 0.00 0.00 37.07 2.40
2341 2383 5.441500 TGAAACCACACATCAGGTAAAGAA 58.558 37.500 0.00 0.00 37.07 2.52
2342 2384 5.042463 TGAAACCACACATCAGGTAAAGA 57.958 39.130 0.00 0.00 37.07 2.52
2343 2385 4.821805 ACTGAAACCACACATCAGGTAAAG 59.178 41.667 6.92 0.00 43.79 1.85
2344 2386 4.787551 ACTGAAACCACACATCAGGTAAA 58.212 39.130 6.92 0.00 43.79 2.01
2345 2387 4.431416 ACTGAAACCACACATCAGGTAA 57.569 40.909 6.92 0.00 43.79 2.85
2349 2391 5.784177 AGTAGTACTGAAACCACACATCAG 58.216 41.667 5.39 0.00 44.77 2.90
3078 3120 5.312895 TGCAGGTAAAGAATTGAGCTAACA 58.687 37.500 0.00 0.00 0.00 2.41
3079 3121 5.880054 TGCAGGTAAAGAATTGAGCTAAC 57.120 39.130 0.00 0.00 0.00 2.34
3199 3241 2.288640 GCAAGAAAAGCATTGCCTGTCT 60.289 45.455 4.70 0.00 44.76 3.41
3333 3375 0.522915 GAGTAACGACCTCGAAGGCG 60.523 60.000 7.96 7.96 39.63 5.52
3958 4000 4.584743 ACCATCTTCGCTATGACTACATCA 59.415 41.667 0.00 0.00 43.13 3.07
4006 4048 4.202441 GTGACCTGAATCAGTGGCAATAT 58.798 43.478 9.63 0.00 0.00 1.28
4007 4049 3.008923 TGTGACCTGAATCAGTGGCAATA 59.991 43.478 9.63 0.19 0.00 1.90
4013 4060 3.744942 CAGAAGTGTGACCTGAATCAGTG 59.255 47.826 9.63 3.55 0.00 3.66
4048 4095 7.149307 GTCTCAGACTTTATAATGCCTAGGAC 58.851 42.308 14.75 4.44 0.00 3.85
4051 4098 7.232534 AGAGGTCTCAGACTTTATAATGCCTAG 59.767 40.741 4.40 0.00 32.47 3.02
4234 4282 2.919328 GCAGCAGTTTTGGCCCCT 60.919 61.111 0.00 0.00 0.00 4.79
4300 4348 0.179045 GAATGGACCCCGATGGAGTG 60.179 60.000 0.00 0.00 38.00 3.51
4340 4388 5.871396 AAAGGACACATACGATGGATACT 57.129 39.130 0.00 0.00 37.61 2.12
4345 4393 4.142687 GGAACAAAAGGACACATACGATGG 60.143 45.833 0.00 0.00 33.60 3.51
4404 4452 5.681105 CACTTGTAAACGTTGGATTTCACTG 59.319 40.000 0.00 0.00 0.00 3.66
4405 4453 5.732247 GCACTTGTAAACGTTGGATTTCACT 60.732 40.000 0.00 0.00 0.00 3.41
4415 4463 5.163992 CGTGATAGATGCACTTGTAAACGTT 60.164 40.000 0.00 0.00 34.18 3.99
4419 4467 4.249661 TGCGTGATAGATGCACTTGTAAA 58.750 39.130 0.00 0.00 41.93 2.01
4428 4476 2.659731 GCTTCTTGCGTGATAGATGC 57.340 50.000 0.00 0.00 35.36 3.91
4442 4490 3.181467 GCAGTGTGATATCCTCAGCTTCT 60.181 47.826 0.00 0.00 33.51 2.85
4466 4514 3.440872 CCTGCACTCTCGTCTATATACCC 59.559 52.174 0.00 0.00 0.00 3.69
4473 4521 1.393603 CCATCCTGCACTCTCGTCTA 58.606 55.000 0.00 0.00 0.00 2.59
4478 4526 0.179078 CTGAGCCATCCTGCACTCTC 60.179 60.000 1.98 0.00 0.00 3.20
4479 4527 1.624479 CCTGAGCCATCCTGCACTCT 61.624 60.000 1.98 0.00 0.00 3.24
4492 4540 1.376553 GGTCTGAACAGCCCTGAGC 60.377 63.158 1.69 0.00 44.25 4.26
4493 4541 0.036577 CTGGTCTGAACAGCCCTGAG 60.037 60.000 10.18 0.00 28.42 3.35
4494 4542 0.764369 ACTGGTCTGAACAGCCCTGA 60.764 55.000 22.11 0.00 39.55 3.86
4495 4543 0.321122 GACTGGTCTGAACAGCCCTG 60.321 60.000 22.11 4.77 39.55 4.45
4496 4544 0.472734 AGACTGGTCTGAACAGCCCT 60.473 55.000 22.11 15.99 39.55 5.19
4497 4545 0.398318 AAGACTGGTCTGAACAGCCC 59.602 55.000 22.11 14.05 40.36 5.19
4498 4546 1.802069 GAAGACTGGTCTGAACAGCC 58.198 55.000 22.11 11.97 40.36 4.85
4499 4547 1.423395 CGAAGACTGGTCTGAACAGC 58.577 55.000 22.11 14.53 40.36 4.40
4500 4548 1.000283 AGCGAAGACTGGTCTGAACAG 60.000 52.381 20.71 20.71 40.36 3.16
4509 4557 2.724977 TGTCACTAAGCGAAGACTGG 57.275 50.000 0.00 0.00 32.41 4.00
4517 4565 4.242475 TCTGTATGGTTTGTCACTAAGCG 58.758 43.478 0.00 0.00 0.00 4.68
4529 4577 1.094785 GCAACGGCATCTGTATGGTT 58.905 50.000 0.00 0.00 40.72 3.67
4541 4589 1.067635 AGAAATCCACAATGCAACGGC 60.068 47.619 0.00 0.00 41.68 5.68
4550 4612 5.048083 GTGTTTAGGCATCAGAAATCCACAA 60.048 40.000 0.00 0.00 0.00 3.33
4560 4622 5.649782 ATTCAAAGGTGTTTAGGCATCAG 57.350 39.130 0.00 0.00 0.00 2.90
4582 4644 4.079787 AGGGGCTACATGAAGCTTATTCAA 60.080 41.667 0.00 0.00 42.37 2.69
4605 4667 9.679661 TGCACAAAATAGGAGTTGATAATAGAA 57.320 29.630 0.00 0.00 0.00 2.10
4609 4671 8.970020 TGATTGCACAAAATAGGAGTTGATAAT 58.030 29.630 0.00 0.00 0.00 1.28
4610 4672 8.347004 TGATTGCACAAAATAGGAGTTGATAA 57.653 30.769 0.00 0.00 0.00 1.75
4612 4674 6.127535 CCTGATTGCACAAAATAGGAGTTGAT 60.128 38.462 0.00 0.00 0.00 2.57
4616 4679 4.460382 CACCTGATTGCACAAAATAGGAGT 59.540 41.667 14.18 0.00 0.00 3.85
4654 4717 9.246670 TGAATTCCTCAATGTGAAAAGACATAT 57.753 29.630 2.27 0.00 35.43 1.78
4655 4718 8.634335 TGAATTCCTCAATGTGAAAAGACATA 57.366 30.769 2.27 0.00 35.43 2.29
4660 4723 8.422973 TTTGTTGAATTCCTCAATGTGAAAAG 57.577 30.769 2.27 0.00 45.74 2.27
4667 4730 7.805071 GTGTCTACTTTGTTGAATTCCTCAATG 59.195 37.037 2.27 11.91 45.74 2.82
4694 4757 4.928661 TGCAGAGAAATAAAGCGAAGTC 57.071 40.909 0.00 0.00 0.00 3.01
4696 4759 6.034256 CCATTTTGCAGAGAAATAAAGCGAAG 59.966 38.462 0.00 0.00 30.96 3.79
4697 4760 5.863397 CCATTTTGCAGAGAAATAAAGCGAA 59.137 36.000 0.00 0.00 0.00 4.70
4748 4811 0.600782 GTGGACGTCGCCAAGGTTTA 60.601 55.000 9.92 0.00 40.20 2.01
4749 4812 1.890510 GTGGACGTCGCCAAGGTTT 60.891 57.895 9.92 0.00 40.20 3.27
4756 4819 2.202837 GGTATGGTGGACGTCGCC 60.203 66.667 17.61 17.61 46.03 5.54
4759 4822 1.436336 CCTCGGTATGGTGGACGTC 59.564 63.158 7.13 7.13 0.00 4.34
4763 4826 2.039787 TGGCCTCGGTATGGTGGA 59.960 61.111 3.32 0.00 0.00 4.02
4772 4835 4.778415 CGTGACTCGTGGCCTCGG 62.778 72.222 25.62 18.28 34.52 4.63
4773 4836 3.669036 CTCGTGACTCGTGGCCTCG 62.669 68.421 20.92 20.92 40.80 4.63
4774 4837 2.179517 CTCGTGACTCGTGGCCTC 59.820 66.667 3.32 0.00 40.80 4.70
4775 4838 2.282251 TCTCGTGACTCGTGGCCT 60.282 61.111 3.32 0.00 40.80 5.19
4776 4839 2.143594 AACTCTCGTGACTCGTGGCC 62.144 60.000 0.00 0.00 40.80 5.36
4777 4840 0.520404 TAACTCTCGTGACTCGTGGC 59.480 55.000 0.00 0.00 40.80 5.01
4778 4841 1.534163 TGTAACTCTCGTGACTCGTGG 59.466 52.381 0.00 0.00 40.80 4.94
4779 4842 2.963498 TGTAACTCTCGTGACTCGTG 57.037 50.000 0.00 0.00 40.80 4.35
4780 4843 3.549625 GGTTTGTAACTCTCGTGACTCGT 60.550 47.826 0.00 0.00 40.80 4.18
4781 4844 2.978489 GGTTTGTAACTCTCGTGACTCG 59.022 50.000 0.00 0.00 41.41 4.18
4782 4845 3.973657 TGGTTTGTAACTCTCGTGACTC 58.026 45.455 0.00 0.00 0.00 3.36
4783 4846 4.602340 ATGGTTTGTAACTCTCGTGACT 57.398 40.909 0.00 0.00 0.00 3.41
4784 4847 4.610680 GCAATGGTTTGTAACTCTCGTGAC 60.611 45.833 0.00 0.00 35.17 3.67
4785 4848 3.496884 GCAATGGTTTGTAACTCTCGTGA 59.503 43.478 0.00 0.00 35.17 4.35
4786 4849 3.249799 TGCAATGGTTTGTAACTCTCGTG 59.750 43.478 0.00 0.00 35.17 4.35
4787 4850 3.472652 TGCAATGGTTTGTAACTCTCGT 58.527 40.909 0.00 0.00 35.17 4.18
4788 4851 4.406069 CATGCAATGGTTTGTAACTCTCG 58.594 43.478 0.00 0.00 41.79 4.04
4789 4852 5.772521 AACATGCAATGGTTTGTAACTCTC 58.227 37.500 0.00 0.00 46.57 3.20
4790 4853 5.536161 AGAACATGCAATGGTTTGTAACTCT 59.464 36.000 0.00 0.00 46.57 3.24
4791 4854 5.630680 CAGAACATGCAATGGTTTGTAACTC 59.369 40.000 0.00 0.00 46.57 3.01
4792 4855 5.301551 TCAGAACATGCAATGGTTTGTAACT 59.698 36.000 0.00 0.00 46.57 2.24
4793 4856 5.527951 TCAGAACATGCAATGGTTTGTAAC 58.472 37.500 0.00 0.00 46.57 2.50
4794 4857 5.781210 TCAGAACATGCAATGGTTTGTAA 57.219 34.783 0.00 0.00 46.57 2.41
4795 4858 5.981088 ATCAGAACATGCAATGGTTTGTA 57.019 34.783 0.00 0.00 46.57 2.41
4796 4859 4.877378 ATCAGAACATGCAATGGTTTGT 57.123 36.364 0.00 0.00 46.57 2.83
4797 4860 7.201574 CCAATAATCAGAACATGCAATGGTTTG 60.202 37.037 0.00 0.00 46.57 2.93
4798 4861 6.819649 CCAATAATCAGAACATGCAATGGTTT 59.180 34.615 0.00 0.00 46.57 3.27
4799 4862 6.342906 CCAATAATCAGAACATGCAATGGTT 58.657 36.000 0.00 0.00 46.57 3.67
4803 4866 5.163385 CCACCCAATAATCAGAACATGCAAT 60.163 40.000 0.00 0.00 0.00 3.56
4804 4867 4.160065 CCACCCAATAATCAGAACATGCAA 59.840 41.667 0.00 0.00 0.00 4.08
4805 4868 3.700539 CCACCCAATAATCAGAACATGCA 59.299 43.478 0.00 0.00 0.00 3.96
4806 4869 3.701040 ACCACCCAATAATCAGAACATGC 59.299 43.478 0.00 0.00 0.00 4.06
4807 4870 5.299279 GGTACCACCCAATAATCAGAACATG 59.701 44.000 7.15 0.00 30.04 3.21
4808 4871 5.193728 AGGTACCACCCAATAATCAGAACAT 59.806 40.000 15.94 0.00 39.75 2.71
4809 4872 4.538490 AGGTACCACCCAATAATCAGAACA 59.462 41.667 15.94 0.00 39.75 3.18
4810 4873 5.112129 AGGTACCACCCAATAATCAGAAC 57.888 43.478 15.94 0.00 39.75 3.01
4811 4874 5.789574 AAGGTACCACCCAATAATCAGAA 57.210 39.130 15.94 0.00 39.75 3.02
4812 4875 6.243216 GTAAGGTACCACCCAATAATCAGA 57.757 41.667 15.94 0.00 39.75 3.27
4849 4912 4.751767 ATGCAGGGTGAAGTTTCAAAAA 57.248 36.364 0.00 0.00 39.21 1.94
4850 4913 5.362430 AGTTATGCAGGGTGAAGTTTCAAAA 59.638 36.000 0.00 0.00 39.21 2.44
4851 4914 4.892934 AGTTATGCAGGGTGAAGTTTCAAA 59.107 37.500 0.00 0.00 39.21 2.69
4852 4915 4.469657 AGTTATGCAGGGTGAAGTTTCAA 58.530 39.130 0.00 0.00 39.21 2.69
4853 4916 4.098914 AGTTATGCAGGGTGAAGTTTCA 57.901 40.909 0.00 0.00 34.20 2.69
4854 4917 6.016610 TGTTTAGTTATGCAGGGTGAAGTTTC 60.017 38.462 0.00 0.00 0.00 2.78
4855 4918 5.830991 TGTTTAGTTATGCAGGGTGAAGTTT 59.169 36.000 0.00 0.00 0.00 2.66
4856 4919 5.381757 TGTTTAGTTATGCAGGGTGAAGTT 58.618 37.500 0.00 0.00 0.00 2.66
4857 4920 4.980573 TGTTTAGTTATGCAGGGTGAAGT 58.019 39.130 0.00 0.00 0.00 3.01
4858 4921 4.396166 CCTGTTTAGTTATGCAGGGTGAAG 59.604 45.833 0.00 0.00 43.39 3.02
4859 4922 4.331968 CCTGTTTAGTTATGCAGGGTGAA 58.668 43.478 0.00 0.00 43.39 3.18
4860 4923 3.950397 CCTGTTTAGTTATGCAGGGTGA 58.050 45.455 0.00 0.00 43.39 4.02
4865 4928 6.742718 CGAAAATCACCTGTTTAGTTATGCAG 59.257 38.462 0.00 0.00 0.00 4.41
4866 4929 6.205853 ACGAAAATCACCTGTTTAGTTATGCA 59.794 34.615 0.00 0.00 0.00 3.96
4867 4930 6.608610 ACGAAAATCACCTGTTTAGTTATGC 58.391 36.000 0.00 0.00 0.00 3.14
4868 4931 9.755064 CTAACGAAAATCACCTGTTTAGTTATG 57.245 33.333 0.00 0.00 35.60 1.90
4869 4932 8.448615 GCTAACGAAAATCACCTGTTTAGTTAT 58.551 33.333 0.00 0.00 35.60 1.89
4870 4933 7.095102 GGCTAACGAAAATCACCTGTTTAGTTA 60.095 37.037 0.00 0.00 35.25 2.24
4871 4934 6.293790 GGCTAACGAAAATCACCTGTTTAGTT 60.294 38.462 0.00 0.00 36.76 2.24
4872 4935 5.180680 GGCTAACGAAAATCACCTGTTTAGT 59.819 40.000 0.00 0.00 0.00 2.24
4873 4936 5.411669 AGGCTAACGAAAATCACCTGTTTAG 59.588 40.000 0.00 0.00 0.00 1.85
4874 4937 5.310451 AGGCTAACGAAAATCACCTGTTTA 58.690 37.500 0.00 0.00 0.00 2.01
4875 4938 4.142038 AGGCTAACGAAAATCACCTGTTT 58.858 39.130 0.00 0.00 0.00 2.83
4876 4939 3.751518 AGGCTAACGAAAATCACCTGTT 58.248 40.909 0.00 0.00 0.00 3.16
4877 4940 3.418684 AGGCTAACGAAAATCACCTGT 57.581 42.857 0.00 0.00 0.00 4.00
4878 4941 6.316390 AGAAATAGGCTAACGAAAATCACCTG 59.684 38.462 0.00 0.00 0.00 4.00
4879 4942 6.415573 AGAAATAGGCTAACGAAAATCACCT 58.584 36.000 0.00 0.00 0.00 4.00
4880 4943 6.539103 AGAGAAATAGGCTAACGAAAATCACC 59.461 38.462 0.00 0.00 0.00 4.02
4881 4944 7.541122 AGAGAAATAGGCTAACGAAAATCAC 57.459 36.000 0.00 0.00 0.00 3.06
4882 4945 9.314321 CTAAGAGAAATAGGCTAACGAAAATCA 57.686 33.333 0.00 0.00 0.00 2.57
4883 4946 8.277018 GCTAAGAGAAATAGGCTAACGAAAATC 58.723 37.037 0.00 0.00 0.00 2.17
4884 4947 7.769044 TGCTAAGAGAAATAGGCTAACGAAAAT 59.231 33.333 0.00 0.00 0.00 1.82
4885 4948 7.101054 TGCTAAGAGAAATAGGCTAACGAAAA 58.899 34.615 0.00 0.00 0.00 2.29
4886 4949 6.636705 TGCTAAGAGAAATAGGCTAACGAAA 58.363 36.000 0.00 0.00 0.00 3.46
4887 4950 6.216801 TGCTAAGAGAAATAGGCTAACGAA 57.783 37.500 0.00 0.00 0.00 3.85
4888 4951 5.847111 TGCTAAGAGAAATAGGCTAACGA 57.153 39.130 0.00 0.00 0.00 3.85
4889 4952 5.107298 GCATGCTAAGAGAAATAGGCTAACG 60.107 44.000 11.37 0.00 0.00 3.18
4890 4953 5.760253 TGCATGCTAAGAGAAATAGGCTAAC 59.240 40.000 20.33 0.00 0.00 2.34
4891 4954 5.928976 TGCATGCTAAGAGAAATAGGCTAA 58.071 37.500 20.33 0.00 0.00 3.09
4892 4955 5.551305 TGCATGCTAAGAGAAATAGGCTA 57.449 39.130 20.33 0.00 0.00 3.93
4893 4956 4.428294 TGCATGCTAAGAGAAATAGGCT 57.572 40.909 20.33 0.00 0.00 4.58
4894 4957 5.505173 TTTGCATGCTAAGAGAAATAGGC 57.495 39.130 20.33 0.00 0.00 3.93
4895 4958 9.006839 TCATATTTGCATGCTAAGAGAAATAGG 57.993 33.333 20.33 18.58 0.00 2.57
4896 4959 9.823098 GTCATATTTGCATGCTAAGAGAAATAG 57.177 33.333 20.33 12.04 0.00 1.73
4897 4960 9.341078 TGTCATATTTGCATGCTAAGAGAAATA 57.659 29.630 20.33 17.91 0.00 1.40
4898 4961 8.133627 GTGTCATATTTGCATGCTAAGAGAAAT 58.866 33.333 20.33 16.39 0.00 2.17
4899 4962 7.415541 GGTGTCATATTTGCATGCTAAGAGAAA 60.416 37.037 20.33 10.10 0.00 2.52
4900 4963 6.038603 GGTGTCATATTTGCATGCTAAGAGAA 59.961 38.462 20.33 4.50 0.00 2.87
4901 4964 5.528690 GGTGTCATATTTGCATGCTAAGAGA 59.471 40.000 20.33 13.28 0.00 3.10
4902 4965 5.530171 AGGTGTCATATTTGCATGCTAAGAG 59.470 40.000 20.33 11.25 0.00 2.85
4903 4966 5.439721 AGGTGTCATATTTGCATGCTAAGA 58.560 37.500 20.33 15.59 0.00 2.10
4904 4967 5.297527 TGAGGTGTCATATTTGCATGCTAAG 59.702 40.000 20.33 6.27 0.00 2.18
4905 4968 5.192176 TGAGGTGTCATATTTGCATGCTAA 58.808 37.500 20.33 18.43 0.00 3.09
4906 4969 4.779696 TGAGGTGTCATATTTGCATGCTA 58.220 39.130 20.33 8.83 0.00 3.49
4907 4970 3.623703 TGAGGTGTCATATTTGCATGCT 58.376 40.909 20.33 0.40 0.00 3.79
4908 4971 4.374843 TTGAGGTGTCATATTTGCATGC 57.625 40.909 11.82 11.82 30.85 4.06
4909 4972 6.237996 GCATTTTGAGGTGTCATATTTGCATG 60.238 38.462 0.00 0.00 30.33 4.06
4910 4973 5.813672 GCATTTTGAGGTGTCATATTTGCAT 59.186 36.000 0.00 0.00 30.33 3.96
4911 4974 5.170021 GCATTTTGAGGTGTCATATTTGCA 58.830 37.500 0.00 0.00 30.33 4.08
4912 4975 5.170021 TGCATTTTGAGGTGTCATATTTGC 58.830 37.500 0.00 0.00 30.85 3.68
4913 4976 6.869913 AGTTGCATTTTGAGGTGTCATATTTG 59.130 34.615 0.00 0.00 30.85 2.32
4914 4977 6.996509 AGTTGCATTTTGAGGTGTCATATTT 58.003 32.000 0.00 0.00 30.85 1.40
4915 4978 6.594788 AGTTGCATTTTGAGGTGTCATATT 57.405 33.333 0.00 0.00 30.85 1.28
4916 4979 6.015180 ACAAGTTGCATTTTGAGGTGTCATAT 60.015 34.615 15.25 0.00 30.85 1.78
4917 4980 5.301551 ACAAGTTGCATTTTGAGGTGTCATA 59.698 36.000 15.25 0.00 30.85 2.15
4918 4981 4.099881 ACAAGTTGCATTTTGAGGTGTCAT 59.900 37.500 15.25 0.00 30.85 3.06
4919 4982 3.446873 ACAAGTTGCATTTTGAGGTGTCA 59.553 39.130 15.25 0.00 0.00 3.58
4920 4983 4.045636 ACAAGTTGCATTTTGAGGTGTC 57.954 40.909 15.25 0.00 0.00 3.67
4921 4984 5.509501 CCATACAAGTTGCATTTTGAGGTGT 60.510 40.000 15.25 2.68 0.00 4.16
4922 4985 4.925054 CCATACAAGTTGCATTTTGAGGTG 59.075 41.667 15.25 10.57 0.00 4.00
4923 4986 4.588528 ACCATACAAGTTGCATTTTGAGGT 59.411 37.500 15.25 14.96 0.00 3.85
4924 4987 5.138125 ACCATACAAGTTGCATTTTGAGG 57.862 39.130 15.25 14.50 0.00 3.86
4925 4988 8.586570 TTTTACCATACAAGTTGCATTTTGAG 57.413 30.769 15.25 6.63 0.00 3.02
4926 4989 8.986847 CATTTTACCATACAAGTTGCATTTTGA 58.013 29.630 15.25 2.82 0.00 2.69
4927 4990 7.745594 GCATTTTACCATACAAGTTGCATTTTG 59.254 33.333 1.81 8.64 0.00 2.44
4928 4991 7.443575 TGCATTTTACCATACAAGTTGCATTTT 59.556 29.630 1.81 0.00 33.09 1.82
4929 4992 6.933521 TGCATTTTACCATACAAGTTGCATTT 59.066 30.769 1.81 0.00 33.09 2.32
4930 4993 6.368516 GTGCATTTTACCATACAAGTTGCATT 59.631 34.615 1.81 0.00 39.46 3.56
4931 4994 5.868801 GTGCATTTTACCATACAAGTTGCAT 59.131 36.000 1.81 0.00 39.46 3.96
4932 4995 5.221322 TGTGCATTTTACCATACAAGTTGCA 60.221 36.000 1.81 0.00 35.42 4.08
4933 4996 5.226396 TGTGCATTTTACCATACAAGTTGC 58.774 37.500 1.81 0.00 0.00 4.17
4934 4997 5.345741 GCTGTGCATTTTACCATACAAGTTG 59.654 40.000 0.00 0.00 0.00 3.16
4935 4998 5.243730 AGCTGTGCATTTTACCATACAAGTT 59.756 36.000 0.00 0.00 0.00 2.66
4936 4999 4.766891 AGCTGTGCATTTTACCATACAAGT 59.233 37.500 0.00 0.00 0.00 3.16
4937 5000 5.106197 TGAGCTGTGCATTTTACCATACAAG 60.106 40.000 0.00 0.00 0.00 3.16
4938 5001 4.764308 TGAGCTGTGCATTTTACCATACAA 59.236 37.500 0.00 0.00 0.00 2.41
4939 5002 4.331108 TGAGCTGTGCATTTTACCATACA 58.669 39.130 0.00 0.00 0.00 2.29
4940 5003 4.963276 TGAGCTGTGCATTTTACCATAC 57.037 40.909 0.00 0.00 0.00 2.39
4941 5004 4.764308 TGTTGAGCTGTGCATTTTACCATA 59.236 37.500 0.00 0.00 0.00 2.74
4942 5005 3.573538 TGTTGAGCTGTGCATTTTACCAT 59.426 39.130 0.00 0.00 0.00 3.55
4943 5006 2.954989 TGTTGAGCTGTGCATTTTACCA 59.045 40.909 0.00 0.00 0.00 3.25
4944 5007 3.641437 TGTTGAGCTGTGCATTTTACC 57.359 42.857 0.00 0.00 0.00 2.85
4945 5008 3.365820 GCATGTTGAGCTGTGCATTTTAC 59.634 43.478 0.00 0.00 37.52 2.01
4946 5009 3.005578 TGCATGTTGAGCTGTGCATTTTA 59.994 39.130 0.00 0.00 42.13 1.52
4947 5010 2.224090 TGCATGTTGAGCTGTGCATTTT 60.224 40.909 0.00 0.00 42.13 1.82
4948 5011 1.341852 TGCATGTTGAGCTGTGCATTT 59.658 42.857 0.00 0.00 42.13 2.32
4949 5012 0.963225 TGCATGTTGAGCTGTGCATT 59.037 45.000 0.00 0.00 42.13 3.56
4950 5013 0.963225 TTGCATGTTGAGCTGTGCAT 59.037 45.000 0.00 0.00 45.80 3.96
4951 5014 0.745468 TTTGCATGTTGAGCTGTGCA 59.255 45.000 0.00 0.00 44.97 4.57
4952 5015 1.134226 GTTTGCATGTTGAGCTGTGC 58.866 50.000 0.00 0.00 38.05 4.57
4953 5016 2.495409 TGTTTGCATGTTGAGCTGTG 57.505 45.000 0.00 0.00 0.00 3.66
4954 5017 3.569277 TGTATGTTTGCATGTTGAGCTGT 59.431 39.130 0.00 0.00 36.58 4.40
4955 5018 4.163458 TGTATGTTTGCATGTTGAGCTG 57.837 40.909 0.00 0.00 36.58 4.24
4956 5019 4.381185 CCATGTATGTTTGCATGTTGAGCT 60.381 41.667 0.00 0.00 42.47 4.09
4957 5020 3.861113 CCATGTATGTTTGCATGTTGAGC 59.139 43.478 0.00 0.00 42.47 4.26
4958 5021 4.158209 TCCCATGTATGTTTGCATGTTGAG 59.842 41.667 0.00 0.00 42.47 3.02
4959 5022 4.085009 TCCCATGTATGTTTGCATGTTGA 58.915 39.130 0.00 0.00 42.47 3.18
4960 5023 4.453177 TCCCATGTATGTTTGCATGTTG 57.547 40.909 0.00 0.00 42.47 3.33
4961 5024 5.480642 TTTCCCATGTATGTTTGCATGTT 57.519 34.783 0.00 0.00 42.47 2.71
4962 5025 5.480642 TTTTCCCATGTATGTTTGCATGT 57.519 34.783 0.00 0.00 42.47 3.21
4963 5026 6.479660 GGTATTTTCCCATGTATGTTTGCATG 59.520 38.462 0.00 0.00 43.31 4.06
4964 5027 6.407979 GGGTATTTTCCCATGTATGTTTGCAT 60.408 38.462 0.00 0.00 46.30 3.96
4965 5028 5.105146 GGGTATTTTCCCATGTATGTTTGCA 60.105 40.000 0.00 0.00 46.30 4.08
4966 5029 5.356426 GGGTATTTTCCCATGTATGTTTGC 58.644 41.667 0.00 0.00 46.30 3.68
4979 5042 7.309377 GGTTGTAAGTTAAGGTGGGTATTTTCC 60.309 40.741 0.00 0.00 0.00 3.13
4980 5043 7.231115 TGGTTGTAAGTTAAGGTGGGTATTTTC 59.769 37.037 0.00 0.00 0.00 2.29
4981 5044 7.068061 TGGTTGTAAGTTAAGGTGGGTATTTT 58.932 34.615 0.00 0.00 0.00 1.82
4982 5045 6.612741 TGGTTGTAAGTTAAGGTGGGTATTT 58.387 36.000 0.00 0.00 0.00 1.40
4983 5046 6.203526 TGGTTGTAAGTTAAGGTGGGTATT 57.796 37.500 0.00 0.00 0.00 1.89
4984 5047 5.846528 TGGTTGTAAGTTAAGGTGGGTAT 57.153 39.130 0.00 0.00 0.00 2.73
4985 5048 5.562635 CATGGTTGTAAGTTAAGGTGGGTA 58.437 41.667 0.00 0.00 0.00 3.69
4986 5049 4.403734 CATGGTTGTAAGTTAAGGTGGGT 58.596 43.478 0.00 0.00 0.00 4.51
4987 5050 3.192633 GCATGGTTGTAAGTTAAGGTGGG 59.807 47.826 0.00 0.00 0.00 4.61
4988 5051 3.823873 TGCATGGTTGTAAGTTAAGGTGG 59.176 43.478 0.00 0.00 0.00 4.61
4989 5052 5.643379 ATGCATGGTTGTAAGTTAAGGTG 57.357 39.130 0.00 0.00 0.00 4.00
4990 5053 5.047377 CCAATGCATGGTTGTAAGTTAAGGT 60.047 40.000 0.00 0.00 44.85 3.50
4991 5054 5.410067 CCAATGCATGGTTGTAAGTTAAGG 58.590 41.667 0.00 0.00 44.85 2.69
5005 5068 9.763465 GTAATTGAAAATCTTTTCCAATGCATG 57.237 29.630 0.00 0.00 44.48 4.06
5006 5069 9.504708 TGTAATTGAAAATCTTTTCCAATGCAT 57.495 25.926 11.73 0.00 44.48 3.96
5007 5070 8.899427 TGTAATTGAAAATCTTTTCCAATGCA 57.101 26.923 11.73 0.00 44.48 3.96
5129 5192 9.952030 TGGTTGTATAGAACACAATTAGATTGA 57.048 29.630 14.11 0.00 43.16 2.57
5160 5223 9.941325 AGATTTGGTTTGAATGTATTGCAATAA 57.059 25.926 20.46 11.38 0.00 1.40
5161 5224 9.941325 AAGATTTGGTTTGAATGTATTGCAATA 57.059 25.926 15.21 15.21 0.00 1.90
5162 5225 8.723311 CAAGATTTGGTTTGAATGTATTGCAAT 58.277 29.630 17.56 17.56 0.00 3.56
5163 5226 7.714377 ACAAGATTTGGTTTGAATGTATTGCAA 59.286 29.630 0.00 0.00 34.12 4.08
5164 5227 7.215789 ACAAGATTTGGTTTGAATGTATTGCA 58.784 30.769 0.00 0.00 34.12 4.08
5165 5228 7.656707 ACAAGATTTGGTTTGAATGTATTGC 57.343 32.000 0.00 0.00 34.12 3.56
5168 5231 9.520515 ACTCTACAAGATTTGGTTTGAATGTAT 57.479 29.630 0.00 0.00 34.12 2.29
5169 5232 8.783093 CACTCTACAAGATTTGGTTTGAATGTA 58.217 33.333 0.00 0.00 34.12 2.29
5170 5233 7.651808 CACTCTACAAGATTTGGTTTGAATGT 58.348 34.615 0.00 0.00 34.12 2.71
5171 5234 6.583806 GCACTCTACAAGATTTGGTTTGAATG 59.416 38.462 0.00 0.00 34.12 2.67
5172 5235 6.265196 TGCACTCTACAAGATTTGGTTTGAAT 59.735 34.615 0.00 0.00 34.12 2.57
5173 5236 5.592282 TGCACTCTACAAGATTTGGTTTGAA 59.408 36.000 0.00 0.00 34.12 2.69
5174 5237 5.129634 TGCACTCTACAAGATTTGGTTTGA 58.870 37.500 0.00 0.00 34.12 2.69
5175 5238 5.437289 TGCACTCTACAAGATTTGGTTTG 57.563 39.130 0.00 0.00 34.12 2.93
5176 5239 5.047802 CCATGCACTCTACAAGATTTGGTTT 60.048 40.000 0.00 0.00 34.12 3.27
5177 5240 4.460382 CCATGCACTCTACAAGATTTGGTT 59.540 41.667 0.00 0.00 34.12 3.67
5178 5241 4.012374 CCATGCACTCTACAAGATTTGGT 58.988 43.478 0.00 0.00 34.12 3.67
5179 5242 4.264253 TCCATGCACTCTACAAGATTTGG 58.736 43.478 0.00 0.00 34.12 3.28
5180 5243 4.334759 CCTCCATGCACTCTACAAGATTTG 59.665 45.833 0.00 0.00 0.00 2.32
5181 5244 4.521146 CCTCCATGCACTCTACAAGATTT 58.479 43.478 0.00 0.00 0.00 2.17
5182 5245 3.118112 CCCTCCATGCACTCTACAAGATT 60.118 47.826 0.00 0.00 0.00 2.40
5183 5246 2.437281 CCCTCCATGCACTCTACAAGAT 59.563 50.000 0.00 0.00 0.00 2.40
5184 5247 1.833630 CCCTCCATGCACTCTACAAGA 59.166 52.381 0.00 0.00 0.00 3.02
5185 5248 1.556911 ACCCTCCATGCACTCTACAAG 59.443 52.381 0.00 0.00 0.00 3.16
5186 5249 1.278985 CACCCTCCATGCACTCTACAA 59.721 52.381 0.00 0.00 0.00 2.41
5187 5250 0.904649 CACCCTCCATGCACTCTACA 59.095 55.000 0.00 0.00 0.00 2.74
5188 5251 0.462759 GCACCCTCCATGCACTCTAC 60.463 60.000 0.00 0.00 42.88 2.59
5189 5252 1.907739 GCACCCTCCATGCACTCTA 59.092 57.895 0.00 0.00 42.88 2.43
5190 5253 2.673523 GCACCCTCCATGCACTCT 59.326 61.111 0.00 0.00 42.88 3.24
5195 5258 2.487532 GCTCATGCACCCTCCATGC 61.488 63.158 0.00 0.00 43.68 4.06
5196 5259 0.818445 GAGCTCATGCACCCTCCATG 60.818 60.000 9.40 0.00 42.74 3.66
5197 5260 1.276859 TGAGCTCATGCACCCTCCAT 61.277 55.000 13.74 0.00 42.74 3.41
5198 5261 1.491274 TTGAGCTCATGCACCCTCCA 61.491 55.000 19.04 0.00 42.74 3.86
5199 5262 0.322816 TTTGAGCTCATGCACCCTCC 60.323 55.000 19.04 0.00 42.74 4.30
5200 5263 1.471684 CTTTTGAGCTCATGCACCCTC 59.528 52.381 19.04 0.00 42.74 4.30
5201 5264 1.202976 ACTTTTGAGCTCATGCACCCT 60.203 47.619 19.04 0.00 42.74 4.34
5202 5265 1.251251 ACTTTTGAGCTCATGCACCC 58.749 50.000 19.04 0.00 42.74 4.61
5203 5266 3.311966 GAAACTTTTGAGCTCATGCACC 58.688 45.455 19.04 0.42 42.74 5.01
5204 5267 3.005155 AGGAAACTTTTGAGCTCATGCAC 59.995 43.478 19.04 5.81 38.88 4.57
5205 5268 3.225104 AGGAAACTTTTGAGCTCATGCA 58.775 40.909 19.04 0.00 38.88 3.96
5206 5269 3.366781 GGAGGAAACTTTTGAGCTCATGC 60.367 47.826 19.04 6.70 44.43 4.06
5207 5270 4.077822 AGGAGGAAACTTTTGAGCTCATG 58.922 43.478 19.04 13.21 44.43 3.07
5208 5271 4.379302 AGGAGGAAACTTTTGAGCTCAT 57.621 40.909 19.04 0.00 44.43 2.90
5209 5272 3.864789 AGGAGGAAACTTTTGAGCTCA 57.135 42.857 13.74 13.74 44.43 4.26
5210 5273 5.048643 GGTTTAGGAGGAAACTTTTGAGCTC 60.049 44.000 6.82 6.82 44.43 4.09
5211 5274 4.827835 GGTTTAGGAGGAAACTTTTGAGCT 59.172 41.667 0.00 0.00 44.43 4.09
5212 5275 4.022242 GGGTTTAGGAGGAAACTTTTGAGC 60.022 45.833 0.00 0.00 44.43 4.26
5213 5276 5.009710 GTGGGTTTAGGAGGAAACTTTTGAG 59.990 44.000 0.00 0.00 44.43 3.02
5214 5277 4.891168 GTGGGTTTAGGAGGAAACTTTTGA 59.109 41.667 0.00 0.00 44.43 2.69
5215 5278 4.893524 AGTGGGTTTAGGAGGAAACTTTTG 59.106 41.667 0.00 0.00 44.43 2.44
5216 5279 5.138758 AGTGGGTTTAGGAGGAAACTTTT 57.861 39.130 0.00 0.00 44.43 2.27
5217 5280 4.808767 AGTGGGTTTAGGAGGAAACTTT 57.191 40.909 0.00 0.00 44.43 2.66
5218 5281 4.808767 AAGTGGGTTTAGGAGGAAACTT 57.191 40.909 0.00 0.00 44.43 2.66
5219 5282 6.160801 CCAAAAGTGGGTTTAGGAGGAAACT 61.161 44.000 0.00 0.00 42.72 2.66
5220 5283 4.038763 CCAAAAGTGGGTTTAGGAGGAAAC 59.961 45.833 0.00 0.00 41.77 2.78
5221 5284 4.219919 CCAAAAGTGGGTTTAGGAGGAAA 58.780 43.478 0.00 0.00 41.77 3.13
5222 5285 3.839778 CCAAAAGTGGGTTTAGGAGGAA 58.160 45.455 0.00 0.00 41.77 3.36
5223 5286 3.518992 CCAAAAGTGGGTTTAGGAGGA 57.481 47.619 0.00 0.00 41.77 3.71
5234 5297 2.223947 GCTACCAAACACCCAAAAGTGG 60.224 50.000 0.00 0.00 45.53 4.00
5235 5298 2.693074 AGCTACCAAACACCCAAAAGTG 59.307 45.455 0.00 0.00 43.65 3.16
5236 5299 3.026707 AGCTACCAAACACCCAAAAGT 57.973 42.857 0.00 0.00 0.00 2.66
5237 5300 3.716601 CAAGCTACCAAACACCCAAAAG 58.283 45.455 0.00 0.00 0.00 2.27
5238 5301 2.159028 GCAAGCTACCAAACACCCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
5239 5302 1.410882 GCAAGCTACCAAACACCCAAA 59.589 47.619 0.00 0.00 0.00 3.28
5240 5303 1.036707 GCAAGCTACCAAACACCCAA 58.963 50.000 0.00 0.00 0.00 4.12
5241 5304 0.106469 TGCAAGCTACCAAACACCCA 60.106 50.000 0.00 0.00 0.00 4.51
5242 5305 0.313987 GTGCAAGCTACCAAACACCC 59.686 55.000 0.00 0.00 0.00 4.61
5243 5306 0.040425 CGTGCAAGCTACCAAACACC 60.040 55.000 0.00 0.00 0.00 4.16
5244 5307 0.040425 CCGTGCAAGCTACCAAACAC 60.040 55.000 0.00 0.00 0.00 3.32
5245 5308 1.169661 CCCGTGCAAGCTACCAAACA 61.170 55.000 0.00 0.00 0.00 2.83
5246 5309 1.579429 CCCGTGCAAGCTACCAAAC 59.421 57.895 0.00 0.00 0.00 2.93
5247 5310 2.265182 GCCCGTGCAAGCTACCAAA 61.265 57.895 0.00 0.00 37.47 3.28
5248 5311 2.671619 GCCCGTGCAAGCTACCAA 60.672 61.111 0.00 0.00 37.47 3.67
5249 5312 4.715523 GGCCCGTGCAAGCTACCA 62.716 66.667 0.00 0.00 40.13 3.25
5250 5313 4.410400 AGGCCCGTGCAAGCTACC 62.410 66.667 0.00 0.92 40.13 3.18
5251 5314 3.127533 CAGGCCCGTGCAAGCTAC 61.128 66.667 0.00 0.00 40.13 3.58
5252 5315 3.190738 AACAGGCCCGTGCAAGCTA 62.191 57.895 0.00 0.00 40.13 3.32
5253 5316 4.586235 AACAGGCCCGTGCAAGCT 62.586 61.111 0.00 0.00 40.13 3.74
5254 5317 4.043200 GAACAGGCCCGTGCAAGC 62.043 66.667 0.00 0.00 40.13 4.01
5255 5318 2.192861 TTGAACAGGCCCGTGCAAG 61.193 57.895 8.58 0.00 40.13 4.01
5256 5319 2.124109 TTGAACAGGCCCGTGCAA 60.124 55.556 8.58 8.58 40.13 4.08
5257 5320 2.904866 GTTGAACAGGCCCGTGCA 60.905 61.111 0.00 0.00 40.13 4.57
5258 5321 2.268076 ATGTTGAACAGGCCCGTGC 61.268 57.895 3.74 0.00 0.00 5.34
5259 5322 1.580942 CATGTTGAACAGGCCCGTG 59.419 57.895 3.74 0.00 0.00 4.94
5260 5323 4.079446 CATGTTGAACAGGCCCGT 57.921 55.556 3.74 0.00 0.00 5.28
5266 5329 1.467734 GAGCTCCTGCATGTTGAACAG 59.532 52.381 0.87 0.00 42.74 3.16
5267 5330 1.527034 GAGCTCCTGCATGTTGAACA 58.473 50.000 0.87 0.00 42.74 3.18
5268 5331 0.445436 CGAGCTCCTGCATGTTGAAC 59.555 55.000 8.47 0.00 42.74 3.18
5269 5332 0.674581 CCGAGCTCCTGCATGTTGAA 60.675 55.000 8.47 0.00 42.74 2.69
5270 5333 1.078918 CCGAGCTCCTGCATGTTGA 60.079 57.895 8.47 0.00 42.74 3.18
5271 5334 2.758089 GCCGAGCTCCTGCATGTTG 61.758 63.158 15.92 0.00 42.74 3.33
5272 5335 2.437359 GCCGAGCTCCTGCATGTT 60.437 61.111 15.92 0.00 42.74 2.71
5273 5336 4.479993 GGCCGAGCTCCTGCATGT 62.480 66.667 20.73 0.00 42.74 3.21
5277 5340 2.608970 TATTTGGGCCGAGCTCCTGC 62.609 60.000 8.47 11.24 40.05 4.85
5278 5341 0.815615 GTATTTGGGCCGAGCTCCTG 60.816 60.000 8.47 0.26 0.00 3.86
5279 5342 1.527370 GTATTTGGGCCGAGCTCCT 59.473 57.895 8.47 0.00 0.00 3.69
5280 5343 1.526225 GGTATTTGGGCCGAGCTCC 60.526 63.158 8.47 0.00 0.00 4.70
5281 5344 0.107165 AAGGTATTTGGGCCGAGCTC 60.107 55.000 2.73 2.73 0.00 4.09
5282 5345 0.107165 GAAGGTATTTGGGCCGAGCT 60.107 55.000 0.00 0.00 0.00 4.09
5283 5346 0.107165 AGAAGGTATTTGGGCCGAGC 60.107 55.000 0.00 0.00 0.00 5.03
5284 5347 2.420058 AAGAAGGTATTTGGGCCGAG 57.580 50.000 0.00 0.00 0.00 4.63
5285 5348 2.420967 GCTAAGAAGGTATTTGGGCCGA 60.421 50.000 0.00 0.00 0.00 5.54
5286 5349 1.947456 GCTAAGAAGGTATTTGGGCCG 59.053 52.381 0.00 0.00 0.00 6.13
5287 5350 2.688446 GTGCTAAGAAGGTATTTGGGCC 59.312 50.000 0.00 0.00 0.00 5.80
5288 5351 2.354821 CGTGCTAAGAAGGTATTTGGGC 59.645 50.000 0.00 0.00 0.00 5.36
5289 5352 3.869065 TCGTGCTAAGAAGGTATTTGGG 58.131 45.455 0.00 0.00 0.00 4.12
5290 5353 5.175859 TCTTCGTGCTAAGAAGGTATTTGG 58.824 41.667 13.52 0.00 43.75 3.28
5291 5354 6.100004 TCTCTTCGTGCTAAGAAGGTATTTG 58.900 40.000 13.52 2.72 43.75 2.32
5292 5355 6.153000 TCTCTCTTCGTGCTAAGAAGGTATTT 59.847 38.462 13.52 0.00 43.75 1.40
5293 5356 5.652891 TCTCTCTTCGTGCTAAGAAGGTATT 59.347 40.000 13.52 0.00 43.75 1.89
5294 5357 5.194432 TCTCTCTTCGTGCTAAGAAGGTAT 58.806 41.667 13.52 0.00 43.75 2.73
5295 5358 4.586884 TCTCTCTTCGTGCTAAGAAGGTA 58.413 43.478 13.52 4.88 43.75 3.08
5296 5359 3.422796 TCTCTCTTCGTGCTAAGAAGGT 58.577 45.455 13.52 0.00 43.75 3.50
5297 5360 4.170256 GTTCTCTCTTCGTGCTAAGAAGG 58.830 47.826 13.52 7.22 43.75 3.46
5298 5361 4.619336 GTGTTCTCTCTTCGTGCTAAGAAG 59.381 45.833 9.17 9.17 44.65 2.85
5299 5362 4.547532 GTGTTCTCTCTTCGTGCTAAGAA 58.452 43.478 0.00 0.00 35.14 2.52
5300 5363 3.057456 GGTGTTCTCTCTTCGTGCTAAGA 60.057 47.826 0.00 0.00 34.39 2.10
5301 5364 3.246619 GGTGTTCTCTCTTCGTGCTAAG 58.753 50.000 0.00 0.00 0.00 2.18
5302 5365 2.029290 GGGTGTTCTCTCTTCGTGCTAA 60.029 50.000 0.00 0.00 0.00 3.09
5303 5366 1.544691 GGGTGTTCTCTCTTCGTGCTA 59.455 52.381 0.00 0.00 0.00 3.49
5304 5367 0.318762 GGGTGTTCTCTCTTCGTGCT 59.681 55.000 0.00 0.00 0.00 4.40
5305 5368 0.670854 GGGGTGTTCTCTCTTCGTGC 60.671 60.000 0.00 0.00 0.00 5.34
5306 5369 0.679505 TGGGGTGTTCTCTCTTCGTG 59.320 55.000 0.00 0.00 0.00 4.35
5307 5370 1.070289 GTTGGGGTGTTCTCTCTTCGT 59.930 52.381 0.00 0.00 0.00 3.85
5308 5371 1.070134 TGTTGGGGTGTTCTCTCTTCG 59.930 52.381 0.00 0.00 0.00 3.79
5309 5372 2.930826 TGTTGGGGTGTTCTCTCTTC 57.069 50.000 0.00 0.00 0.00 2.87
5310 5373 3.756117 GATTGTTGGGGTGTTCTCTCTT 58.244 45.455 0.00 0.00 0.00 2.85
5311 5374 2.289694 CGATTGTTGGGGTGTTCTCTCT 60.290 50.000 0.00 0.00 0.00 3.10
5312 5375 2.076863 CGATTGTTGGGGTGTTCTCTC 58.923 52.381 0.00 0.00 0.00 3.20
5313 5376 1.420138 ACGATTGTTGGGGTGTTCTCT 59.580 47.619 0.00 0.00 0.00 3.10
5314 5377 1.892209 ACGATTGTTGGGGTGTTCTC 58.108 50.000 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.