Multiple sequence alignment - TraesCS2A01G305900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G305900 chr2A 100.000 4815 0 0 1 4815 526096719 526101533 0.000000e+00 8892.0
1 TraesCS2A01G305900 chr2A 95.833 888 37 0 3897 4784 526112669 526113556 0.000000e+00 1435.0
2 TraesCS2A01G305900 chr2A 96.721 305 10 0 167 471 585704264 585703960 4.300000e-140 508.0
3 TraesCS2A01G305900 chr2B 92.704 1727 68 16 1921 3637 461128128 461129806 0.000000e+00 2438.0
4 TraesCS2A01G305900 chr2B 91.716 1340 63 29 472 1797 461126646 461127951 0.000000e+00 1816.0
5 TraesCS2A01G305900 chr2B 96.091 307 11 1 169 475 798371939 798371634 2.590000e-137 499.0
6 TraesCS2A01G305900 chr2B 94.953 317 14 2 157 471 531145273 531144957 3.350000e-136 496.0
7 TraesCS2A01G305900 chr2B 89.114 395 31 5 3691 4084 461129914 461130297 9.370000e-132 481.0
8 TraesCS2A01G305900 chr2B 89.219 269 27 2 3817 4084 47253039 47253306 7.720000e-88 335.0
9 TraesCS2A01G305900 chr2B 89.139 267 29 0 3818 4084 87168266 87168532 2.780000e-87 333.0
10 TraesCS2A01G305900 chr2B 79.148 446 59 20 1328 1766 717363255 717363673 1.320000e-70 278.0
11 TraesCS2A01G305900 chr2B 95.946 148 3 1 24 168 461126513 461126660 2.240000e-58 237.0
12 TraesCS2A01G305900 chr2D 95.296 1488 51 12 2204 3683 389289850 389291326 0.000000e+00 2342.0
13 TraesCS2A01G305900 chr2D 94.095 779 35 5 1019 1797 389287180 389287947 0.000000e+00 1173.0
14 TraesCS2A01G305900 chr2D 87.870 338 14 13 624 959 389286848 389287160 5.890000e-99 372.0
15 TraesCS2A01G305900 chr2D 89.552 268 28 0 3817 4084 405281255 405280988 1.660000e-89 340.0
16 TraesCS2A01G305900 chr2D 89.513 267 28 0 3818 4084 620552210 620551944 5.970000e-89 339.0
17 TraesCS2A01G305900 chr2D 90.789 228 3 2 1921 2145 389289615 389289827 6.100000e-74 289.0
18 TraesCS2A01G305900 chr2D 88.889 171 13 3 1 168 389286522 389286689 6.320000e-49 206.0
19 TraesCS2A01G305900 chr2D 91.935 124 10 0 3691 3814 389291397 389291520 1.780000e-39 174.0
20 TraesCS2A01G305900 chr7D 91.346 728 62 1 4088 4815 517352717 517353443 0.000000e+00 994.0
21 TraesCS2A01G305900 chr7D 89.055 201 21 1 1547 1747 290559899 290560098 1.030000e-61 248.0
22 TraesCS2A01G305900 chr5D 90.847 732 65 2 4084 4814 497299041 497299771 0.000000e+00 979.0
23 TraesCS2A01G305900 chr5D 89.481 732 68 8 4086 4814 487532118 487531393 0.000000e+00 917.0
24 TraesCS2A01G305900 chr5D 87.808 730 76 10 4086 4810 417045202 417045923 0.000000e+00 843.0
25 TraesCS2A01G305900 chr4B 89.891 732 71 2 4084 4814 25893415 25892686 0.000000e+00 939.0
26 TraesCS2A01G305900 chr4B 96.417 307 11 0 167 473 40215228 40215534 1.550000e-139 507.0
27 TraesCS2A01G305900 chr1B 89.423 728 70 7 4087 4812 97490514 97491236 0.000000e+00 911.0
28 TraesCS2A01G305900 chr7A 89.350 723 71 4 4093 4815 592206974 592207690 0.000000e+00 904.0
29 TraesCS2A01G305900 chr7A 95.765 307 13 0 167 473 4784764 4785070 3.350000e-136 496.0
30 TraesCS2A01G305900 chr7A 81.390 403 58 9 1345 1747 329013065 329013450 3.620000e-81 313.0
31 TraesCS2A01G305900 chr3D 87.989 741 86 3 4077 4815 49479996 49480735 0.000000e+00 872.0
32 TraesCS2A01G305900 chr3A 96.429 308 10 1 167 473 717621002 717621309 1.550000e-139 507.0
33 TraesCS2A01G305900 chr3A 93.093 333 21 2 155 486 630764216 630763885 2.010000e-133 486.0
34 TraesCS2A01G305900 chr3A 75.556 135 33 0 1603 1737 396019501 396019635 3.110000e-07 67.6
35 TraesCS2A01G305900 chr6A 96.405 306 11 0 166 471 181909847 181910152 5.560000e-139 505.0
36 TraesCS2A01G305900 chr6A 89.139 267 29 0 3818 4084 617751682 617751948 2.780000e-87 333.0
37 TraesCS2A01G305900 chr5B 93.293 328 20 2 163 488 124716389 124716716 2.610000e-132 483.0
38 TraesCS2A01G305900 chr5B 88.930 271 30 0 3814 4084 445179619 445179349 7.720000e-88 335.0
39 TraesCS2A01G305900 chr5B 81.090 312 45 8 1437 1747 24648889 24648591 2.240000e-58 237.0
40 TraesCS2A01G305900 chr7B 89.219 269 29 0 3816 4084 394827496 394827228 2.150000e-88 337.0
41 TraesCS2A01G305900 chr7B 79.065 449 60 20 1328 1769 226614508 226614087 1.320000e-70 278.0
42 TraesCS2A01G305900 chr6D 82.075 424 48 24 1328 1747 472449559 472449160 2.150000e-88 337.0
43 TraesCS2A01G305900 chr3B 89.179 268 29 0 3817 4084 825271087 825271354 7.720000e-88 335.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G305900 chr2A 526096719 526101533 4814 False 8892.000000 8892 100.000 1 4815 1 chr2A.!!$F1 4814
1 TraesCS2A01G305900 chr2A 526112669 526113556 887 False 1435.000000 1435 95.833 3897 4784 1 chr2A.!!$F2 887
2 TraesCS2A01G305900 chr2B 461126513 461130297 3784 False 1243.000000 2438 92.370 24 4084 4 chr2B.!!$F4 4060
3 TraesCS2A01G305900 chr2D 389286522 389291520 4998 False 759.333333 2342 91.479 1 3814 6 chr2D.!!$F1 3813
4 TraesCS2A01G305900 chr7D 517352717 517353443 726 False 994.000000 994 91.346 4088 4815 1 chr7D.!!$F2 727
5 TraesCS2A01G305900 chr5D 497299041 497299771 730 False 979.000000 979 90.847 4084 4814 1 chr5D.!!$F2 730
6 TraesCS2A01G305900 chr5D 487531393 487532118 725 True 917.000000 917 89.481 4086 4814 1 chr5D.!!$R1 728
7 TraesCS2A01G305900 chr5D 417045202 417045923 721 False 843.000000 843 87.808 4086 4810 1 chr5D.!!$F1 724
8 TraesCS2A01G305900 chr4B 25892686 25893415 729 True 939.000000 939 89.891 4084 4814 1 chr4B.!!$R1 730
9 TraesCS2A01G305900 chr1B 97490514 97491236 722 False 911.000000 911 89.423 4087 4812 1 chr1B.!!$F1 725
10 TraesCS2A01G305900 chr7A 592206974 592207690 716 False 904.000000 904 89.350 4093 4815 1 chr7A.!!$F3 722
11 TraesCS2A01G305900 chr3D 49479996 49480735 739 False 872.000000 872 87.989 4077 4815 1 chr3D.!!$F1 738

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
274 281 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.0 0.0 0.0 3.24 F
412 419 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.0 0.0 0.0 0.0 3.18 F
1801 1851 0.108329 GCCGTTCCCAGATTCTCGAA 60.108 55.0 0.0 0.0 0.0 3.71 F
2229 3848 0.036022 AAGTCTGAAGCCTGTCTGCC 59.964 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1532 1582 1.066645 TGCACCAACAACACATGCAAA 60.067 42.857 0.00 0.00 43.00 3.68 R
2066 3685 1.758122 GGATGCCAATGGACCCCAC 60.758 63.158 2.05 0.00 35.80 4.61 R
3036 4663 1.153349 GAGGCCGCCGAAGAAGAAT 60.153 57.895 3.05 0.00 0.00 2.40 R
4186 5878 0.248289 GAACATGCAGGCAGCCAAAT 59.752 50.000 15.80 0.37 44.83 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 7.975866 AGCGACATTAAAGCAGAAAATTATG 57.024 32.000 0.00 0.00 0.00 1.90
53 54 6.974622 AGCGACATTAAAGCAGAAAATTATGG 59.025 34.615 0.00 0.00 0.00 2.74
159 166 9.323985 TGGCACCAGAATTATTTTTATAATTGC 57.676 29.630 7.62 5.74 36.98 3.56
160 167 9.546428 GGCACCAGAATTATTTTTATAATTGCT 57.454 29.630 7.62 3.66 36.98 3.91
194 201 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
195 202 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
196 203 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
197 204 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
198 205 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
199 206 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
200 207 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
201 208 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
202 209 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
203 210 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
204 211 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
205 212 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
206 213 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
207 214 4.053983 CAGACACAAGCGCTCATATACAT 58.946 43.478 12.06 0.00 0.00 2.29
208 215 4.053983 AGACACAAGCGCTCATATACATG 58.946 43.478 12.06 4.91 0.00 3.21
209 216 2.545526 ACACAAGCGCTCATATACATGC 59.454 45.455 12.06 0.00 31.73 4.06
215 222 3.559530 CGCTCATATACATGCGCATAC 57.440 47.619 24.84 3.31 41.94 2.39
216 223 2.923020 CGCTCATATACATGCGCATACA 59.077 45.455 24.84 14.18 41.94 2.29
217 224 3.241773 CGCTCATATACATGCGCATACAC 60.242 47.826 24.84 4.36 41.94 2.90
218 225 3.928992 GCTCATATACATGCGCATACACT 59.071 43.478 24.84 10.63 41.55 3.55
219 226 4.032217 GCTCATATACATGCGCATACACTC 59.968 45.833 24.84 2.68 41.55 3.51
220 227 5.132897 TCATATACATGCGCATACACTCA 57.867 39.130 24.84 6.80 31.73 3.41
221 228 4.923281 TCATATACATGCGCATACACTCAC 59.077 41.667 24.84 0.00 31.73 3.51
222 229 1.934589 TACATGCGCATACACTCACC 58.065 50.000 24.84 0.00 0.00 4.02
223 230 0.744414 ACATGCGCATACACTCACCC 60.744 55.000 24.84 0.00 0.00 4.61
224 231 0.462581 CATGCGCATACACTCACCCT 60.463 55.000 24.84 0.00 0.00 4.34
225 232 0.253044 ATGCGCATACACTCACCCTT 59.747 50.000 24.02 0.00 0.00 3.95
226 233 0.899019 TGCGCATACACTCACCCTTA 59.101 50.000 5.66 0.00 0.00 2.69
227 234 1.484653 TGCGCATACACTCACCCTTAT 59.515 47.619 5.66 0.00 0.00 1.73
228 235 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
229 236 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
230 237 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
231 238 3.555956 CGCATACACTCACCCTTATGAAC 59.444 47.826 0.00 0.00 0.00 3.18
232 239 3.555956 GCATACACTCACCCTTATGAACG 59.444 47.826 0.00 0.00 0.00 3.95
233 240 2.094762 ACACTCACCCTTATGAACGC 57.905 50.000 0.00 0.00 0.00 4.84
234 241 1.346395 ACACTCACCCTTATGAACGCA 59.654 47.619 0.00 0.00 0.00 5.24
235 242 1.732259 CACTCACCCTTATGAACGCAC 59.268 52.381 0.00 0.00 0.00 5.34
236 243 1.346395 ACTCACCCTTATGAACGCACA 59.654 47.619 0.00 0.00 0.00 4.57
237 244 1.732259 CTCACCCTTATGAACGCACAC 59.268 52.381 0.00 0.00 0.00 3.82
238 245 1.070914 TCACCCTTATGAACGCACACA 59.929 47.619 0.00 0.00 0.00 3.72
239 246 1.196808 CACCCTTATGAACGCACACAC 59.803 52.381 0.00 0.00 0.00 3.82
240 247 0.442310 CCCTTATGAACGCACACACG 59.558 55.000 0.00 0.00 39.50 4.49
241 248 0.179225 CCTTATGAACGCACACACGC 60.179 55.000 0.00 0.00 36.19 5.34
242 249 0.510790 CTTATGAACGCACACACGCA 59.489 50.000 0.00 0.00 36.19 5.24
243 250 0.233590 TTATGAACGCACACACGCAC 59.766 50.000 0.00 0.00 36.19 5.34
244 251 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
245 252 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
246 253 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
249 256 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
250 257 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
251 258 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
252 259 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
253 260 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
254 261 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
255 262 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
256 263 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
257 264 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
258 265 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
259 266 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
260 267 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
261 268 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
262 269 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
263 270 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
264 271 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
265 272 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
266 273 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
267 274 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
268 275 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
269 276 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
270 277 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
271 278 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
272 279 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
273 280 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
274 281 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
275 282 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
276 283 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
277 284 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
278 285 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
279 286 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
280 287 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
281 288 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
282 289 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
283 290 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
284 291 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
285 292 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
286 293 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
287 294 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
288 295 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
289 296 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
290 297 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
291 298 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
292 299 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
293 300 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
294 301 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
295 302 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
296 303 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
297 304 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
298 305 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
299 306 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
300 307 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
301 308 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
302 309 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
303 310 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
304 311 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
305 312 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
306 313 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
307 314 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
308 315 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
309 316 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
310 317 6.925211 TCATCTTGAGATTTACGAAGTCACT 58.075 36.000 0.00 0.00 35.39 3.41
311 318 6.808704 TCATCTTGAGATTTACGAAGTCACTG 59.191 38.462 0.00 0.00 35.39 3.66
312 319 6.085555 TCTTGAGATTTACGAAGTCACTGT 57.914 37.500 0.00 0.00 43.93 3.55
313 320 7.210718 TCTTGAGATTTACGAAGTCACTGTA 57.789 36.000 0.00 0.00 43.93 2.74
314 321 7.306213 TCTTGAGATTTACGAAGTCACTGTAG 58.694 38.462 0.00 0.00 43.93 2.74
315 322 5.950883 TGAGATTTACGAAGTCACTGTAGG 58.049 41.667 0.00 0.00 43.93 3.18
316 323 4.745649 AGATTTACGAAGTCACTGTAGGC 58.254 43.478 0.00 0.00 43.93 3.93
317 324 2.624316 TTACGAAGTCACTGTAGGCG 57.376 50.000 0.00 0.00 43.93 5.52
318 325 0.169672 TACGAAGTCACTGTAGGCGC 59.830 55.000 0.00 0.00 43.93 6.53
319 326 1.805945 CGAAGTCACTGTAGGCGCC 60.806 63.158 21.89 21.89 0.00 6.53
320 327 1.592223 GAAGTCACTGTAGGCGCCT 59.408 57.895 34.85 34.85 0.00 5.52
321 328 0.458716 GAAGTCACTGTAGGCGCCTC 60.459 60.000 36.73 24.38 0.00 4.70
322 329 2.202623 GTCACTGTAGGCGCCTCG 60.203 66.667 36.73 24.39 0.00 4.63
323 330 2.675423 TCACTGTAGGCGCCTCGT 60.675 61.111 36.73 25.10 0.00 4.18
324 331 2.202623 CACTGTAGGCGCCTCGTC 60.203 66.667 36.73 24.11 0.00 4.20
325 332 3.812019 ACTGTAGGCGCCTCGTCG 61.812 66.667 36.73 21.73 36.23 5.12
326 333 3.812019 CTGTAGGCGCCTCGTCGT 61.812 66.667 36.73 11.27 36.23 4.34
327 334 3.736482 CTGTAGGCGCCTCGTCGTC 62.736 68.421 36.73 17.21 36.23 4.20
328 335 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
349 356 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
350 357 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
351 358 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
352 359 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
353 360 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
354 361 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
355 362 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
356 363 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
357 364 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
358 365 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
359 366 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
360 367 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
361 368 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
372 379 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
373 380 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
374 381 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
375 382 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
376 383 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
377 384 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
378 385 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
379 386 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
380 387 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
381 388 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
382 389 5.369833 TCGCCGGAAATCCTGAAATAAATA 58.630 37.500 5.05 0.00 0.00 1.40
383 390 5.237779 TCGCCGGAAATCCTGAAATAAATAC 59.762 40.000 5.05 0.00 0.00 1.89
384 391 5.008217 CGCCGGAAATCCTGAAATAAATACA 59.992 40.000 5.05 0.00 0.00 2.29
385 392 6.438763 GCCGGAAATCCTGAAATAAATACAG 58.561 40.000 5.05 0.00 0.00 2.74
386 393 6.262273 GCCGGAAATCCTGAAATAAATACAGA 59.738 38.462 5.05 0.00 34.07 3.41
387 394 7.201785 GCCGGAAATCCTGAAATAAATACAGAA 60.202 37.037 5.05 0.00 34.07 3.02
388 395 8.682710 CCGGAAATCCTGAAATAAATACAGAAA 58.317 33.333 0.00 0.00 34.07 2.52
395 402 8.826710 TCCTGAAATAAATACAGAAATAGTGCG 58.173 33.333 0.00 0.00 34.07 5.34
396 403 8.826710 CCTGAAATAAATACAGAAATAGTGCGA 58.173 33.333 0.00 0.00 34.07 5.10
397 404 9.855361 CTGAAATAAATACAGAAATAGTGCGAG 57.145 33.333 0.00 0.00 34.07 5.03
398 405 8.335356 TGAAATAAATACAGAAATAGTGCGAGC 58.665 33.333 0.00 0.00 0.00 5.03
399 406 7.786178 AATAAATACAGAAATAGTGCGAGCA 57.214 32.000 0.00 0.00 0.00 4.26
400 407 5.470845 AAATACAGAAATAGTGCGAGCAC 57.529 39.130 19.45 19.45 46.50 4.40
408 415 3.987404 GTGCGAGCACCAGGATTT 58.013 55.556 16.66 0.00 40.79 2.17
409 416 1.503542 GTGCGAGCACCAGGATTTG 59.496 57.895 16.66 0.00 40.79 2.32
410 417 0.955428 GTGCGAGCACCAGGATTTGA 60.955 55.000 16.66 0.00 40.79 2.69
411 418 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
412 419 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
413 420 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
414 421 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
415 422 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
432 439 2.364972 CCTGATGGGTTGGGAATACC 57.635 55.000 0.00 0.00 40.81 2.73
442 449 0.988832 TGGGAATACCACTGTCCACC 59.011 55.000 0.00 0.00 46.80 4.61
443 450 1.286248 GGGAATACCACTGTCCACCT 58.714 55.000 0.00 0.00 39.85 4.00
444 451 2.225675 TGGGAATACCACTGTCCACCTA 60.226 50.000 0.00 0.00 46.80 3.08
445 452 2.841881 GGGAATACCACTGTCCACCTAA 59.158 50.000 0.00 0.00 39.85 2.69
446 453 3.370209 GGGAATACCACTGTCCACCTAAC 60.370 52.174 0.00 0.00 39.85 2.34
447 454 3.370209 GGAATACCACTGTCCACCTAACC 60.370 52.174 0.00 0.00 35.97 2.85
448 455 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
449 456 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
450 457 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
451 458 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
452 459 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
453 460 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
454 461 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
455 462 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
456 463 2.506231 TGTCCACCTAACCAACTCAACA 59.494 45.455 0.00 0.00 0.00 3.33
457 464 3.054287 TGTCCACCTAACCAACTCAACAA 60.054 43.478 0.00 0.00 0.00 2.83
458 465 3.314357 GTCCACCTAACCAACTCAACAAC 59.686 47.826 0.00 0.00 0.00 3.32
459 466 3.054287 TCCACCTAACCAACTCAACAACA 60.054 43.478 0.00 0.00 0.00 3.33
460 467 3.315191 CCACCTAACCAACTCAACAACAG 59.685 47.826 0.00 0.00 0.00 3.16
461 468 4.196193 CACCTAACCAACTCAACAACAGA 58.804 43.478 0.00 0.00 0.00 3.41
462 469 4.821805 CACCTAACCAACTCAACAACAGAT 59.178 41.667 0.00 0.00 0.00 2.90
463 470 5.299279 CACCTAACCAACTCAACAACAGATT 59.701 40.000 0.00 0.00 0.00 2.40
464 471 5.299279 ACCTAACCAACTCAACAACAGATTG 59.701 40.000 0.00 0.00 41.98 2.67
465 472 5.530915 CCTAACCAACTCAACAACAGATTGA 59.469 40.000 0.00 0.00 39.30 2.57
466 473 6.207417 CCTAACCAACTCAACAACAGATTGAT 59.793 38.462 0.00 0.00 39.30 2.57
467 474 6.469782 AACCAACTCAACAACAGATTGATT 57.530 33.333 0.00 0.00 39.30 2.57
468 475 6.076981 ACCAACTCAACAACAGATTGATTC 57.923 37.500 0.00 0.00 39.30 2.52
469 476 5.149273 CCAACTCAACAACAGATTGATTCG 58.851 41.667 0.00 0.00 39.30 3.34
470 477 4.410492 ACTCAACAACAGATTGATTCGC 57.590 40.909 0.00 0.00 39.30 4.70
471 478 4.067896 ACTCAACAACAGATTGATTCGCT 58.932 39.130 0.00 0.00 39.30 4.93
472 479 5.237815 ACTCAACAACAGATTGATTCGCTA 58.762 37.500 0.00 0.00 39.30 4.26
473 480 5.700832 ACTCAACAACAGATTGATTCGCTAA 59.299 36.000 0.00 0.00 39.30 3.09
474 481 6.372659 ACTCAACAACAGATTGATTCGCTAAT 59.627 34.615 0.00 0.00 39.30 1.73
475 482 7.094634 ACTCAACAACAGATTGATTCGCTAATT 60.095 33.333 0.00 0.00 39.30 1.40
476 483 7.022979 TCAACAACAGATTGATTCGCTAATTG 58.977 34.615 0.00 0.00 39.30 2.32
491 498 4.606457 CTAATTGCTAGCACTTGACACC 57.394 45.455 25.69 0.00 0.00 4.16
535 542 1.229428 ATGGAGTGAAATATGCGCCG 58.771 50.000 4.18 0.00 0.00 6.46
658 686 2.583045 GCGCATGCCATTTTCCCG 60.583 61.111 13.15 0.00 33.98 5.14
678 706 2.423088 CGGTATACACAGGAGGGAGAGT 60.423 54.545 5.01 0.00 0.00 3.24
679 707 3.224269 GGTATACACAGGAGGGAGAGTC 58.776 54.545 5.01 0.00 0.00 3.36
680 708 3.372784 GGTATACACAGGAGGGAGAGTCA 60.373 52.174 5.01 0.00 0.00 3.41
681 709 2.516227 TACACAGGAGGGAGAGTCAG 57.484 55.000 0.00 0.00 0.00 3.51
682 710 0.780637 ACACAGGAGGGAGAGTCAGA 59.219 55.000 0.00 0.00 0.00 3.27
683 711 1.272425 ACACAGGAGGGAGAGTCAGAG 60.272 57.143 0.00 0.00 0.00 3.35
730 758 5.479375 AGAATCCCGTTAGTAGTCAACTGAA 59.521 40.000 0.00 0.00 39.39 3.02
731 759 4.778534 TCCCGTTAGTAGTCAACTGAAG 57.221 45.455 0.00 0.00 39.39 3.02
735 763 4.217983 CCGTTAGTAGTCAACTGAAGGAGT 59.782 45.833 0.00 0.00 43.30 3.85
795 824 0.978907 CCAAGCCAAGGCAAGGAATT 59.021 50.000 14.40 0.00 44.88 2.17
796 825 1.066645 CCAAGCCAAGGCAAGGAATTC 60.067 52.381 14.40 0.00 44.88 2.17
797 826 1.619827 CAAGCCAAGGCAAGGAATTCA 59.380 47.619 14.40 0.00 44.88 2.57
830 861 2.531103 CACGGAATATAAACGAACGCGA 59.469 45.455 15.93 0.00 41.64 5.87
831 862 3.000872 CACGGAATATAAACGAACGCGAA 60.001 43.478 15.93 0.00 41.64 4.70
832 863 3.000773 ACGGAATATAAACGAACGCGAAC 60.001 43.478 15.93 5.01 41.64 3.95
834 865 2.616117 ATATAAACGAACGCGAACGC 57.384 45.000 15.93 9.20 45.53 4.84
889 920 1.737201 GGCCTACGCTCCTCTCTTC 59.263 63.158 0.00 0.00 34.44 2.87
971 1002 1.067142 CCGCCGCAAAGCCTATATAGA 60.067 52.381 11.53 0.00 0.00 1.98
972 1003 2.418746 CCGCCGCAAAGCCTATATAGAT 60.419 50.000 11.53 0.00 0.00 1.98
973 1004 3.181479 CCGCCGCAAAGCCTATATAGATA 60.181 47.826 11.53 0.00 0.00 1.98
974 1005 4.045104 CGCCGCAAAGCCTATATAGATAG 58.955 47.826 11.53 0.00 35.67 2.08
987 1018 2.400467 TAGATAGGCTCCCTTCACCC 57.600 55.000 0.00 0.00 34.61 4.61
988 1019 0.400670 AGATAGGCTCCCTTCACCCC 60.401 60.000 0.00 0.00 34.61 4.95
989 1020 1.386057 ATAGGCTCCCTTCACCCCC 60.386 63.158 0.00 0.00 34.61 5.40
990 1021 1.914496 ATAGGCTCCCTTCACCCCCT 61.914 60.000 0.00 0.00 34.61 4.79
1207 1253 1.955080 GGAGGGAGATGGTACGTACTG 59.045 57.143 24.07 0.00 0.00 2.74
1279 1325 3.332919 TGTATCGGCTCTCTACGTATCC 58.667 50.000 0.00 0.00 0.00 2.59
1281 1327 1.207085 CGGCTCTCTACGTATCCGC 59.793 63.158 0.00 0.00 37.70 5.54
1319 1365 2.494918 CGACGGCGAGGAGGATTT 59.505 61.111 16.62 0.00 40.82 2.17
1378 1424 3.181486 TGAGATGAGACGCTGGTTACATC 60.181 47.826 0.00 0.00 38.28 3.06
1405 1454 2.959372 GGTAAAACTGTGGCGGCC 59.041 61.111 13.32 13.32 0.00 6.13
1455 1505 2.593346 AGAGGCGTGATGTGATCTTC 57.407 50.000 0.00 0.00 0.00 2.87
1488 1538 1.659211 GCGAATTGCGTCTCGTTTTGT 60.659 47.619 0.00 0.00 43.41 2.83
1493 1543 2.851104 CGTCTCGTTTTGTCGGCC 59.149 61.111 0.00 0.00 0.00 6.13
1532 1582 6.617782 TTCTCAAGAGATGGAGATGTTTCT 57.382 37.500 0.00 0.00 39.71 2.52
1773 1823 2.359975 CCCGGAACTTCCCTGCAC 60.360 66.667 0.73 0.00 31.13 4.57
1774 1824 2.750350 CCGGAACTTCCCTGCACT 59.250 61.111 0.00 0.00 31.13 4.40
1775 1825 1.376037 CCGGAACTTCCCTGCACTC 60.376 63.158 0.00 0.00 31.13 3.51
1776 1826 1.376037 CGGAACTTCCCTGCACTCC 60.376 63.158 1.97 0.00 31.13 3.85
1777 1827 1.761174 GGAACTTCCCTGCACTCCA 59.239 57.895 0.00 0.00 0.00 3.86
1797 1847 2.584608 CCGCCGTTCCCAGATTCT 59.415 61.111 0.00 0.00 0.00 2.40
1798 1848 1.521681 CCGCCGTTCCCAGATTCTC 60.522 63.158 0.00 0.00 0.00 2.87
1800 1850 1.515954 GCCGTTCCCAGATTCTCGA 59.484 57.895 0.00 0.00 0.00 4.04
1801 1851 0.108329 GCCGTTCCCAGATTCTCGAA 60.108 55.000 0.00 0.00 0.00 3.71
1802 1852 1.473434 GCCGTTCCCAGATTCTCGAAT 60.473 52.381 0.00 0.00 0.00 3.34
1803 1853 2.474816 CCGTTCCCAGATTCTCGAATC 58.525 52.381 10.84 10.84 45.66 2.52
1807 1857 1.414181 TCCCAGATTCTCGAATCAGGC 59.586 52.381 19.79 0.00 46.77 4.85
1808 1858 1.542108 CCCAGATTCTCGAATCAGGCC 60.542 57.143 19.79 0.00 46.77 5.19
1809 1859 3.872739 CCCAGATTCTCGAATCAGGCCT 61.873 54.545 19.79 0.00 46.77 5.19
1810 1860 4.571386 CCCAGATTCTCGAATCAGGCCTA 61.571 52.174 19.79 0.00 46.77 3.93
1811 1861 5.842722 CCCAGATTCTCGAATCAGGCCTAT 61.843 50.000 19.79 0.00 46.77 2.57
1812 1862 7.583898 CCCAGATTCTCGAATCAGGCCTATC 62.584 52.000 19.79 3.30 46.77 2.08
1813 1863 4.799564 GATTCTCGAATCAGGCCTATCT 57.200 45.455 3.98 0.00 44.89 1.98
1814 1864 4.493547 GATTCTCGAATCAGGCCTATCTG 58.506 47.826 3.98 0.00 44.89 2.90
1815 1865 2.950781 TCTCGAATCAGGCCTATCTGT 58.049 47.619 3.98 0.00 36.25 3.41
1816 1866 2.625314 TCTCGAATCAGGCCTATCTGTG 59.375 50.000 3.98 0.00 36.25 3.66
1817 1867 2.625314 CTCGAATCAGGCCTATCTGTGA 59.375 50.000 3.98 0.00 36.25 3.58
1818 1868 3.234353 TCGAATCAGGCCTATCTGTGAT 58.766 45.455 3.98 0.00 36.25 3.06
1819 1869 3.643320 TCGAATCAGGCCTATCTGTGATT 59.357 43.478 3.98 10.43 41.31 2.57
1820 1870 4.832823 TCGAATCAGGCCTATCTGTGATTA 59.167 41.667 3.98 0.00 39.25 1.75
1821 1871 5.481824 TCGAATCAGGCCTATCTGTGATTAT 59.518 40.000 3.98 0.00 39.25 1.28
1822 1872 6.663523 TCGAATCAGGCCTATCTGTGATTATA 59.336 38.462 3.98 0.00 39.25 0.98
1840 1890 9.076596 GTGATTATAATTTTGGTGCTCTGTTTC 57.923 33.333 0.00 0.00 0.00 2.78
1855 1905 2.146342 TGTTTCTGCTCTGCTTGTAGC 58.854 47.619 0.00 0.00 42.82 3.58
1875 2018 8.840833 TGTAGCATTCTGAATGTACTGTTTTA 57.159 30.769 26.22 11.03 41.01 1.52
1882 2025 9.998106 ATTCTGAATGTACTGTTTTACTGTACT 57.002 29.630 20.28 7.90 46.80 2.73
1888 2031 6.342906 TGTACTGTTTTACTGTACTTGTGCT 58.657 36.000 20.28 0.00 46.80 4.40
1901 2044 2.549754 ACTTGTGCTGTATGACTTGTGC 59.450 45.455 0.00 0.00 0.00 4.57
1902 2045 1.522668 TGTGCTGTATGACTTGTGCC 58.477 50.000 0.00 0.00 0.00 5.01
1910 2053 5.240183 GCTGTATGACTTGTGCCATATTCAT 59.760 40.000 0.00 0.00 0.00 2.57
1911 2054 6.238842 GCTGTATGACTTGTGCCATATTCATT 60.239 38.462 0.00 0.00 0.00 2.57
1913 2056 8.382030 TGTATGACTTGTGCCATATTCATTAG 57.618 34.615 0.00 0.00 0.00 1.73
1914 2057 6.889301 ATGACTTGTGCCATATTCATTAGG 57.111 37.500 0.00 0.00 0.00 2.69
1916 2059 6.057533 TGACTTGTGCCATATTCATTAGGAG 58.942 40.000 0.00 0.00 0.00 3.69
1917 2060 6.006275 ACTTGTGCCATATTCATTAGGAGT 57.994 37.500 0.00 0.00 0.00 3.85
1918 2061 7.136822 ACTTGTGCCATATTCATTAGGAGTA 57.863 36.000 0.00 0.00 0.00 2.59
1919 2062 7.749666 ACTTGTGCCATATTCATTAGGAGTAT 58.250 34.615 0.00 0.00 0.00 2.12
1943 3562 4.675976 TTCAGGGTAAAAGACTCGTTGA 57.324 40.909 0.00 0.00 31.62 3.18
2135 3754 2.643551 CTCATTGCCGGAATTGGTACT 58.356 47.619 5.05 0.00 0.00 2.73
2145 3764 3.477530 GGAATTGGTACTCAGGTATGCC 58.522 50.000 0.00 0.00 0.00 4.40
2149 3768 2.116238 TGGTACTCAGGTATGCCCTTC 58.884 52.381 0.00 0.00 42.73 3.46
2150 3769 2.292918 TGGTACTCAGGTATGCCCTTCT 60.293 50.000 0.00 0.00 42.73 2.85
2151 3770 2.103263 GGTACTCAGGTATGCCCTTCTG 59.897 54.545 0.00 0.00 42.73 3.02
2152 3771 1.958288 ACTCAGGTATGCCCTTCTGT 58.042 50.000 0.00 0.00 42.73 3.41
2153 3772 1.834263 ACTCAGGTATGCCCTTCTGTC 59.166 52.381 0.00 0.00 42.73 3.51
2154 3773 1.833630 CTCAGGTATGCCCTTCTGTCA 59.166 52.381 0.00 0.00 42.73 3.58
2155 3774 1.833630 TCAGGTATGCCCTTCTGTCAG 59.166 52.381 0.00 0.00 42.73 3.51
2156 3775 1.556911 CAGGTATGCCCTTCTGTCAGT 59.443 52.381 0.00 0.00 42.73 3.41
2157 3776 2.026822 CAGGTATGCCCTTCTGTCAGTT 60.027 50.000 0.00 0.00 42.73 3.16
2158 3777 2.026822 AGGTATGCCCTTCTGTCAGTTG 60.027 50.000 0.00 0.00 42.73 3.16
2159 3778 1.740025 GTATGCCCTTCTGTCAGTTGC 59.260 52.381 0.00 0.00 0.00 4.17
2160 3779 0.403271 ATGCCCTTCTGTCAGTTGCT 59.597 50.000 0.00 0.00 0.00 3.91
2161 3780 0.183492 TGCCCTTCTGTCAGTTGCTT 59.817 50.000 0.00 0.00 0.00 3.91
2162 3781 0.877743 GCCCTTCTGTCAGTTGCTTC 59.122 55.000 0.00 0.00 0.00 3.86
2163 3782 1.815408 GCCCTTCTGTCAGTTGCTTCA 60.815 52.381 0.00 0.00 0.00 3.02
2164 3783 2.787994 CCCTTCTGTCAGTTGCTTCAT 58.212 47.619 0.00 0.00 0.00 2.57
2165 3784 2.746362 CCCTTCTGTCAGTTGCTTCATC 59.254 50.000 0.00 0.00 0.00 2.92
2166 3785 3.405831 CCTTCTGTCAGTTGCTTCATCA 58.594 45.455 0.00 0.00 0.00 3.07
2167 3786 4.008330 CCTTCTGTCAGTTGCTTCATCAT 58.992 43.478 0.00 0.00 0.00 2.45
2168 3787 5.181009 CCTTCTGTCAGTTGCTTCATCATA 58.819 41.667 0.00 0.00 0.00 2.15
2169 3788 5.821470 CCTTCTGTCAGTTGCTTCATCATAT 59.179 40.000 0.00 0.00 0.00 1.78
2170 3789 6.988580 CCTTCTGTCAGTTGCTTCATCATATA 59.011 38.462 0.00 0.00 0.00 0.86
2171 3790 7.660617 CCTTCTGTCAGTTGCTTCATCATATAT 59.339 37.037 0.00 0.00 0.00 0.86
2172 3791 9.702494 CTTCTGTCAGTTGCTTCATCATATATA 57.298 33.333 0.00 0.00 0.00 0.86
2197 3816 6.029346 AGTTTGATTTCATGCTAACTTGGG 57.971 37.500 0.00 0.00 0.00 4.12
2199 3818 5.902613 TTGATTTCATGCTAACTTGGGAG 57.097 39.130 0.00 0.00 0.00 4.30
2229 3848 0.036022 AAGTCTGAAGCCTGTCTGCC 59.964 55.000 0.00 0.00 0.00 4.85
2241 3860 0.179234 TGTCTGCCCGTTCTTGTTCA 59.821 50.000 0.00 0.00 0.00 3.18
2244 3863 2.293399 GTCTGCCCGTTCTTGTTCATTT 59.707 45.455 0.00 0.00 0.00 2.32
2245 3864 2.552315 TCTGCCCGTTCTTGTTCATTTC 59.448 45.455 0.00 0.00 0.00 2.17
2249 3868 3.253432 GCCCGTTCTTGTTCATTTCTCTT 59.747 43.478 0.00 0.00 0.00 2.85
2257 3876 6.218019 TCTTGTTCATTTCTCTTGCATTTGG 58.782 36.000 0.00 0.00 0.00 3.28
2478 4097 2.464459 CGCCTTGGAAGTCATCGCC 61.464 63.158 0.00 0.00 0.00 5.54
2512 4131 2.435663 CCATGTGGTGGCAGGTCA 59.564 61.111 0.00 0.00 42.12 4.02
2513 4132 1.973281 CCATGTGGTGGCAGGTCAC 60.973 63.158 8.15 8.15 42.12 3.67
2514 4133 1.228215 CATGTGGTGGCAGGTCACA 60.228 57.895 16.81 16.81 44.12 3.58
2515 4134 0.822944 CATGTGGTGGCAGGTCACAA 60.823 55.000 17.91 0.00 43.38 3.33
2516 4135 0.112995 ATGTGGTGGCAGGTCACAAT 59.887 50.000 17.91 7.87 43.38 2.71
2517 4136 0.822944 TGTGGTGGCAGGTCACAATG 60.823 55.000 13.52 0.00 38.30 2.82
2518 4137 1.902918 TGGTGGCAGGTCACAATGC 60.903 57.895 6.35 0.00 41.80 3.56
2519 4138 1.604593 GGTGGCAGGTCACAATGCT 60.605 57.895 6.35 0.00 42.19 3.79
2522 4141 0.961019 TGGCAGGTCACAATGCTTTC 59.039 50.000 4.41 0.00 42.19 2.62
2523 4142 0.244721 GGCAGGTCACAATGCTTTCC 59.755 55.000 4.41 0.00 42.19 3.13
2524 4143 1.251251 GCAGGTCACAATGCTTTCCT 58.749 50.000 0.00 0.00 39.38 3.36
2525 4144 1.615392 GCAGGTCACAATGCTTTCCTT 59.385 47.619 0.00 0.00 39.38 3.36
2526 4145 2.036346 GCAGGTCACAATGCTTTCCTTT 59.964 45.455 0.00 0.00 39.38 3.11
2527 4146 3.645884 CAGGTCACAATGCTTTCCTTTG 58.354 45.455 0.00 0.00 35.38 2.77
2530 4149 3.319122 GGTCACAATGCTTTCCTTTGAGT 59.681 43.478 0.00 0.00 33.92 3.41
2531 4150 4.540824 GTCACAATGCTTTCCTTTGAGTC 58.459 43.478 0.00 0.00 33.92 3.36
2532 4151 4.036734 GTCACAATGCTTTCCTTTGAGTCA 59.963 41.667 0.00 0.00 33.92 3.41
2533 4152 4.828939 TCACAATGCTTTCCTTTGAGTCAT 59.171 37.500 0.00 0.00 33.92 3.06
2549 4175 4.516698 TGAGTCATCAAAACTGAAAGAGGC 59.483 41.667 0.00 0.00 32.03 4.70
2554 4180 3.620488 TCAAAACTGAAAGAGGCACACT 58.380 40.909 0.00 0.00 37.43 3.55
2564 4191 8.612823 CTGAAAGAGGCACACTGCAGAAAAAT 62.613 42.308 23.35 0.84 40.75 1.82
2973 4600 0.303796 CGCAGATACTCTACGACGCA 59.696 55.000 0.00 0.00 35.37 5.24
3036 4663 1.767088 CTCTTCATCATCTGGGGCTCA 59.233 52.381 0.00 0.00 0.00 4.26
3438 5065 1.545875 CCCACCGTGTACCCAATCAAA 60.546 52.381 0.00 0.00 0.00 2.69
3507 5134 0.253894 TCATCATGCTCTGGTGGGTG 59.746 55.000 1.11 0.00 36.56 4.61
3559 5186 0.803768 CAGGAACATCGACGAGCAGG 60.804 60.000 3.01 0.00 0.00 4.85
3560 5187 2.167861 GGAACATCGACGAGCAGGC 61.168 63.158 3.01 0.00 0.00 4.85
3619 5246 0.179124 GGTCTGAGAGCCAAGTAGCG 60.179 60.000 0.00 0.00 38.01 4.26
3632 5259 2.414058 AGTAGCGATGCTCGATCAAG 57.586 50.000 9.32 0.00 43.74 3.02
3657 5284 6.140737 GTCATGTGTTGTCATTCTTTTTCGTC 59.859 38.462 0.00 0.00 0.00 4.20
3677 5304 2.180204 GGCTCTGCGTGTGTGTGTT 61.180 57.895 0.00 0.00 0.00 3.32
3678 5305 1.010797 GCTCTGCGTGTGTGTGTTG 60.011 57.895 0.00 0.00 0.00 3.33
3683 5310 1.395262 CTGCGTGTGTGTGTTGTGTTA 59.605 47.619 0.00 0.00 0.00 2.41
3685 5312 1.854434 GCGTGTGTGTGTTGTGTTAGC 60.854 52.381 0.00 0.00 0.00 3.09
3686 5313 1.267832 CGTGTGTGTGTTGTGTTAGCC 60.268 52.381 0.00 0.00 0.00 3.93
3688 5315 3.199677 GTGTGTGTGTTGTGTTAGCCTA 58.800 45.455 0.00 0.00 0.00 3.93
3689 5316 3.813166 GTGTGTGTGTTGTGTTAGCCTAT 59.187 43.478 0.00 0.00 0.00 2.57
3699 5390 7.438459 GTGTTGTGTTAGCCTATATAGGTTGAG 59.562 40.741 26.27 4.84 45.42 3.02
3785 5476 2.089936 CCGATCGAAAACGCCGTGA 61.090 57.895 18.66 0.00 0.00 4.35
3808 5499 7.766278 GTGAGCTGAAATGAATAGAAAGGAGTA 59.234 37.037 0.00 0.00 0.00 2.59
3878 5569 8.894409 TCAATCATGACAATAAAACGAACATC 57.106 30.769 0.00 0.00 0.00 3.06
3880 5571 8.791605 CAATCATGACAATAAAACGAACATCAG 58.208 33.333 0.00 0.00 0.00 2.90
4022 5713 6.320418 TGTTGTAGTAGACAGTCAGAAAGTCA 59.680 38.462 2.66 0.00 39.88 3.41
4186 5878 5.355596 CCAAAAACCAACATCTGCACTTAA 58.644 37.500 0.00 0.00 0.00 1.85
4217 5909 2.753452 CTGCATGTTCTCTTCCTGCATT 59.247 45.455 0.00 0.00 41.55 3.56
4382 6074 0.608035 CAATGGTAGGCGGTGGTTGT 60.608 55.000 0.00 0.00 0.00 3.32
4490 6182 2.354259 CAGAGAAAGTCCATGTGGAGC 58.646 52.381 1.07 0.00 46.49 4.70
4673 6368 1.590525 GATGTCGACGGCGCCATTA 60.591 57.895 28.98 5.32 36.09 1.90
4786 6481 3.935203 CGACCGAGTTAGTGTAGTAGGAA 59.065 47.826 0.00 0.00 0.00 3.36
4794 6489 2.458620 AGTGTAGTAGGAAGTGGGAGC 58.541 52.381 0.00 0.00 0.00 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
169 176 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
170 177 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
171 178 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
172 179 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
173 180 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
174 181 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
175 182 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
176 183 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
177 184 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
178 185 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
179 186 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
180 187 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
181 188 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
182 189 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
183 190 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
184 191 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
185 192 3.447742 TGTATATGAGCGCTTGTGTCTG 58.552 45.455 13.26 0.00 0.00 3.51
186 193 3.801114 TGTATATGAGCGCTTGTGTCT 57.199 42.857 13.26 0.00 0.00 3.41
187 194 3.363378 GCATGTATATGAGCGCTTGTGTC 60.363 47.826 13.26 0.00 36.36 3.67
188 195 2.545526 GCATGTATATGAGCGCTTGTGT 59.454 45.455 13.26 4.27 36.36 3.72
189 196 2.410646 CGCATGTATATGAGCGCTTGTG 60.411 50.000 13.26 5.93 43.80 3.33
190 197 1.794701 CGCATGTATATGAGCGCTTGT 59.205 47.619 13.26 5.98 43.80 3.16
191 198 2.498961 CGCATGTATATGAGCGCTTG 57.501 50.000 13.26 3.84 43.80 4.01
197 204 5.061435 GTGAGTGTATGCGCATGTATATGAG 59.939 44.000 32.48 0.87 36.36 2.90
198 205 4.923281 GTGAGTGTATGCGCATGTATATGA 59.077 41.667 32.48 8.02 36.36 2.15
199 206 4.091945 GGTGAGTGTATGCGCATGTATATG 59.908 45.833 32.48 0.00 37.36 1.78
200 207 4.245660 GGTGAGTGTATGCGCATGTATAT 58.754 43.478 32.48 14.31 0.00 0.86
201 208 3.554129 GGGTGAGTGTATGCGCATGTATA 60.554 47.826 32.48 10.12 0.00 1.47
202 209 2.483876 GGTGAGTGTATGCGCATGTAT 58.516 47.619 32.48 15.41 0.00 2.29
203 210 1.472552 GGGTGAGTGTATGCGCATGTA 60.473 52.381 32.48 17.97 0.00 2.29
204 211 0.744414 GGGTGAGTGTATGCGCATGT 60.744 55.000 32.48 11.40 0.00 3.21
205 212 0.462581 AGGGTGAGTGTATGCGCATG 60.463 55.000 32.48 0.00 0.00 4.06
206 213 0.253044 AAGGGTGAGTGTATGCGCAT 59.747 50.000 28.23 28.23 0.00 4.73
207 214 0.899019 TAAGGGTGAGTGTATGCGCA 59.101 50.000 14.96 14.96 0.00 6.09
208 215 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
209 216 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
210 217 3.555956 CGTTCATAAGGGTGAGTGTATGC 59.444 47.826 0.00 0.00 0.00 3.14
211 218 3.555956 GCGTTCATAAGGGTGAGTGTATG 59.444 47.826 0.00 0.00 0.00 2.39
212 219 3.196901 TGCGTTCATAAGGGTGAGTGTAT 59.803 43.478 0.00 0.00 0.00 2.29
213 220 2.563620 TGCGTTCATAAGGGTGAGTGTA 59.436 45.455 0.00 0.00 0.00 2.90
214 221 1.346395 TGCGTTCATAAGGGTGAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
215 222 1.732259 GTGCGTTCATAAGGGTGAGTG 59.268 52.381 0.00 0.00 0.00 3.51
216 223 1.346395 TGTGCGTTCATAAGGGTGAGT 59.654 47.619 0.00 0.00 0.00 3.41
217 224 1.732259 GTGTGCGTTCATAAGGGTGAG 59.268 52.381 0.00 0.00 0.00 3.51
218 225 1.070914 TGTGTGCGTTCATAAGGGTGA 59.929 47.619 0.00 0.00 0.00 4.02
219 226 1.196808 GTGTGTGCGTTCATAAGGGTG 59.803 52.381 0.00 0.00 0.00 4.61
220 227 1.519408 GTGTGTGCGTTCATAAGGGT 58.481 50.000 0.00 0.00 0.00 4.34
221 228 0.442310 CGTGTGTGCGTTCATAAGGG 59.558 55.000 0.00 0.00 0.00 3.95
222 229 0.179225 GCGTGTGTGCGTTCATAAGG 60.179 55.000 0.00 0.00 0.00 2.69
223 230 0.510790 TGCGTGTGTGCGTTCATAAG 59.489 50.000 0.00 0.00 37.81 1.73
224 231 0.233590 GTGCGTGTGTGCGTTCATAA 59.766 50.000 0.00 0.00 37.81 1.90
225 232 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
226 233 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
227 234 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
228 235 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
229 236 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
232 239 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
233 240 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
234 241 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
235 242 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
236 243 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
237 244 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
238 245 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
239 246 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
240 247 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
241 248 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
242 249 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
243 250 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
244 251 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
245 252 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
246 253 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
247 254 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
248 255 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
249 256 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
250 257 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
251 258 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
252 259 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
253 260 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
254 261 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
255 262 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
256 263 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
257 264 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
258 265 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
259 266 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
260 267 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
261 268 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
262 269 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
263 270 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
264 271 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
265 272 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
266 273 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
267 274 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
268 275 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
269 276 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
270 277 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
271 278 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
272 279 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
273 280 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
274 281 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
275 282 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
276 283 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
277 284 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
278 285 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
279 286 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
280 287 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
281 288 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
282 289 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
283 290 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
284 291 8.687242 AGTGACTTCGTAAATCTCAAGATGATA 58.313 33.333 0.00 0.00 34.49 2.15
285 292 7.490725 CAGTGACTTCGTAAATCTCAAGATGAT 59.509 37.037 0.00 0.00 34.49 2.45
286 293 6.808704 CAGTGACTTCGTAAATCTCAAGATGA 59.191 38.462 0.00 0.00 34.49 2.92
287 294 6.587990 ACAGTGACTTCGTAAATCTCAAGATG 59.412 38.462 0.00 0.00 34.49 2.90
288 295 6.692486 ACAGTGACTTCGTAAATCTCAAGAT 58.308 36.000 0.00 0.00 36.07 2.40
289 296 6.085555 ACAGTGACTTCGTAAATCTCAAGA 57.914 37.500 0.00 0.00 0.00 3.02
290 297 6.528423 CCTACAGTGACTTCGTAAATCTCAAG 59.472 42.308 0.00 0.00 0.00 3.02
291 298 6.387465 CCTACAGTGACTTCGTAAATCTCAA 58.613 40.000 0.00 0.00 0.00 3.02
292 299 5.621555 GCCTACAGTGACTTCGTAAATCTCA 60.622 44.000 0.00 0.00 0.00 3.27
293 300 4.799428 GCCTACAGTGACTTCGTAAATCTC 59.201 45.833 0.00 0.00 0.00 2.75
294 301 4.674623 CGCCTACAGTGACTTCGTAAATCT 60.675 45.833 0.00 0.00 0.00 2.40
295 302 3.546670 CGCCTACAGTGACTTCGTAAATC 59.453 47.826 0.00 0.00 0.00 2.17
296 303 3.508762 CGCCTACAGTGACTTCGTAAAT 58.491 45.455 0.00 0.00 0.00 1.40
297 304 2.923605 GCGCCTACAGTGACTTCGTAAA 60.924 50.000 0.00 0.00 0.00 2.01
298 305 1.401931 GCGCCTACAGTGACTTCGTAA 60.402 52.381 0.00 0.00 0.00 3.18
299 306 0.169672 GCGCCTACAGTGACTTCGTA 59.830 55.000 0.00 0.00 0.00 3.43
300 307 1.080705 GCGCCTACAGTGACTTCGT 60.081 57.895 0.00 0.00 0.00 3.85
301 308 1.805945 GGCGCCTACAGTGACTTCG 60.806 63.158 22.15 0.00 0.00 3.79
302 309 1.592223 AGGCGCCTACAGTGACTTC 59.408 57.895 31.86 0.00 44.04 3.01
303 310 3.793060 AGGCGCCTACAGTGACTT 58.207 55.556 31.86 0.00 44.04 3.01
305 312 2.202623 CGAGGCGCCTACAGTGAC 60.203 66.667 32.97 14.51 0.00 3.67
306 313 2.675423 ACGAGGCGCCTACAGTGA 60.675 61.111 32.97 0.00 0.00 3.41
307 314 2.202623 GACGAGGCGCCTACAGTG 60.203 66.667 32.97 18.94 0.00 3.66
308 315 3.812019 CGACGAGGCGCCTACAGT 61.812 66.667 32.97 28.48 0.00 3.55
309 316 3.736482 GACGACGAGGCGCCTACAG 62.736 68.421 32.97 25.33 33.86 2.74
310 317 3.807538 GACGACGAGGCGCCTACA 61.808 66.667 32.97 0.00 33.86 2.74
333 340 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
334 341 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
335 342 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
336 343 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
337 344 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
338 345 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
339 346 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
340 347 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
341 348 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
342 349 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
343 350 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
344 351 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
355 362 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
356 363 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
357 364 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
358 365 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
359 366 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
360 367 4.568152 ATTTATTTCAGGATTTCCGGCG 57.432 40.909 0.00 0.00 42.08 6.46
361 368 6.262273 TCTGTATTTATTTCAGGATTTCCGGC 59.738 38.462 0.00 0.00 42.08 6.13
362 369 7.801716 TCTGTATTTATTTCAGGATTTCCGG 57.198 36.000 0.00 0.00 42.08 5.14
369 376 8.826710 CGCACTATTTCTGTATTTATTTCAGGA 58.173 33.333 0.00 0.00 0.00 3.86
370 377 8.826710 TCGCACTATTTCTGTATTTATTTCAGG 58.173 33.333 0.00 0.00 0.00 3.86
371 378 9.855361 CTCGCACTATTTCTGTATTTATTTCAG 57.145 33.333 0.00 0.00 0.00 3.02
372 379 8.335356 GCTCGCACTATTTCTGTATTTATTTCA 58.665 33.333 0.00 0.00 0.00 2.69
373 380 8.335356 TGCTCGCACTATTTCTGTATTTATTTC 58.665 33.333 0.00 0.00 0.00 2.17
374 381 8.122952 GTGCTCGCACTATTTCTGTATTTATTT 58.877 33.333 14.38 0.00 43.12 1.40
375 382 7.254795 GGTGCTCGCACTATTTCTGTATTTATT 60.255 37.037 20.05 0.00 45.52 1.40
376 383 6.202954 GGTGCTCGCACTATTTCTGTATTTAT 59.797 38.462 20.05 0.00 45.52 1.40
377 384 5.522460 GGTGCTCGCACTATTTCTGTATTTA 59.478 40.000 20.05 0.00 45.52 1.40
378 385 4.332819 GGTGCTCGCACTATTTCTGTATTT 59.667 41.667 20.05 0.00 45.52 1.40
379 386 3.871594 GGTGCTCGCACTATTTCTGTATT 59.128 43.478 20.05 0.00 45.52 1.89
380 387 3.118775 TGGTGCTCGCACTATTTCTGTAT 60.119 43.478 20.05 0.00 45.52 2.29
381 388 2.232696 TGGTGCTCGCACTATTTCTGTA 59.767 45.455 20.05 0.00 45.52 2.74
382 389 1.001974 TGGTGCTCGCACTATTTCTGT 59.998 47.619 20.05 0.00 45.52 3.41
383 390 1.662629 CTGGTGCTCGCACTATTTCTG 59.337 52.381 20.05 5.17 45.52 3.02
384 391 1.406069 CCTGGTGCTCGCACTATTTCT 60.406 52.381 20.05 0.00 45.52 2.52
385 392 1.009829 CCTGGTGCTCGCACTATTTC 58.990 55.000 20.05 5.32 45.52 2.17
386 393 0.613260 TCCTGGTGCTCGCACTATTT 59.387 50.000 20.05 0.00 45.52 1.40
387 394 0.833287 ATCCTGGTGCTCGCACTATT 59.167 50.000 20.05 1.71 45.52 1.73
388 395 0.833287 AATCCTGGTGCTCGCACTAT 59.167 50.000 20.05 7.66 45.52 2.12
389 396 0.613260 AAATCCTGGTGCTCGCACTA 59.387 50.000 20.05 14.17 45.52 2.74
390 397 0.957395 CAAATCCTGGTGCTCGCACT 60.957 55.000 20.05 0.00 45.52 4.40
391 398 0.955428 TCAAATCCTGGTGCTCGCAC 60.955 55.000 13.37 13.37 45.49 5.34
392 399 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
393 400 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
394 401 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
395 402 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
396 403 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
397 404 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
413 420 1.568597 TGGTATTCCCAACCCATCAGG 59.431 52.381 0.00 0.00 41.50 3.86
423 430 0.988832 GGTGGACAGTGGTATTCCCA 59.011 55.000 0.00 0.00 42.51 4.37
424 431 1.286248 AGGTGGACAGTGGTATTCCC 58.714 55.000 0.00 0.00 0.00 3.97
425 432 3.370209 GGTTAGGTGGACAGTGGTATTCC 60.370 52.174 0.00 0.00 0.00 3.01
426 433 3.262405 TGGTTAGGTGGACAGTGGTATTC 59.738 47.826 0.00 0.00 0.00 1.75
427 434 3.253220 TGGTTAGGTGGACAGTGGTATT 58.747 45.455 0.00 0.00 0.00 1.89
428 435 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
429 436 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
430 437 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
431 438 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
432 439 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
433 440 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
434 441 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
435 442 2.506231 TGTTGAGTTGGTTAGGTGGACA 59.494 45.455 0.00 0.00 0.00 4.02
436 443 3.202829 TGTTGAGTTGGTTAGGTGGAC 57.797 47.619 0.00 0.00 0.00 4.02
437 444 3.054287 TGTTGTTGAGTTGGTTAGGTGGA 60.054 43.478 0.00 0.00 0.00 4.02
438 445 3.283751 TGTTGTTGAGTTGGTTAGGTGG 58.716 45.455 0.00 0.00 0.00 4.61
439 446 4.196193 TCTGTTGTTGAGTTGGTTAGGTG 58.804 43.478 0.00 0.00 0.00 4.00
440 447 4.497291 TCTGTTGTTGAGTTGGTTAGGT 57.503 40.909 0.00 0.00 0.00 3.08
441 448 5.530915 TCAATCTGTTGTTGAGTTGGTTAGG 59.469 40.000 0.00 0.00 36.69 2.69
442 449 6.618287 TCAATCTGTTGTTGAGTTGGTTAG 57.382 37.500 0.00 0.00 36.69 2.34
443 450 7.519809 CGAATCAATCTGTTGTTGAGTTGGTTA 60.520 37.037 0.00 0.00 38.81 2.85
444 451 6.469782 AATCAATCTGTTGTTGAGTTGGTT 57.530 33.333 0.00 0.00 38.81 3.67
445 452 5.277974 CGAATCAATCTGTTGTTGAGTTGGT 60.278 40.000 0.00 0.00 38.81 3.67
446 453 5.149273 CGAATCAATCTGTTGTTGAGTTGG 58.851 41.667 0.00 0.00 38.81 3.77
447 454 4.614284 GCGAATCAATCTGTTGTTGAGTTG 59.386 41.667 0.00 0.00 38.81 3.16
448 455 4.516698 AGCGAATCAATCTGTTGTTGAGTT 59.483 37.500 0.00 0.00 38.81 3.01
449 456 4.067896 AGCGAATCAATCTGTTGTTGAGT 58.932 39.130 0.00 0.00 38.81 3.41
450 457 4.675190 AGCGAATCAATCTGTTGTTGAG 57.325 40.909 0.00 0.00 38.81 3.02
451 458 6.741992 ATTAGCGAATCAATCTGTTGTTGA 57.258 33.333 0.00 0.00 39.65 3.18
452 459 6.237384 GCAATTAGCGAATCAATCTGTTGTTG 60.237 38.462 0.00 0.00 36.69 3.33
453 460 5.801947 GCAATTAGCGAATCAATCTGTTGTT 59.198 36.000 0.00 0.00 36.69 2.83
454 461 5.335127 GCAATTAGCGAATCAATCTGTTGT 58.665 37.500 0.00 0.00 36.69 3.32
455 462 5.861491 GCAATTAGCGAATCAATCTGTTG 57.139 39.130 0.00 0.00 36.65 3.33
470 477 4.256920 AGGTGTCAAGTGCTAGCAATTAG 58.743 43.478 28.07 21.20 32.73 1.73
471 478 4.286297 AGGTGTCAAGTGCTAGCAATTA 57.714 40.909 28.07 12.12 32.73 1.40
472 479 3.146104 AGGTGTCAAGTGCTAGCAATT 57.854 42.857 23.83 23.83 34.39 2.32
473 480 2.867109 AGGTGTCAAGTGCTAGCAAT 57.133 45.000 21.29 17.01 0.00 3.56
474 481 2.609491 CGTAGGTGTCAAGTGCTAGCAA 60.609 50.000 21.29 0.00 0.00 3.91
475 482 1.067846 CGTAGGTGTCAAGTGCTAGCA 60.068 52.381 14.93 14.93 0.00 3.49
476 483 1.067776 ACGTAGGTGTCAAGTGCTAGC 60.068 52.381 8.10 8.10 0.00 3.42
535 542 7.735630 CGTTGTACGTGTATTTCTAACAAAC 57.264 36.000 0.00 0.00 36.74 2.93
611 621 7.441458 ACACTGGTATTGTTTGTCTCTAAGTTC 59.559 37.037 0.00 0.00 0.00 3.01
643 671 1.039856 ATACCGGGAAAATGGCATGC 58.960 50.000 9.90 9.90 0.00 4.06
658 686 3.224269 GACTCTCCCTCCTGTGTATACC 58.776 54.545 0.00 0.00 0.00 2.73
678 706 1.993956 GAGGCAGCTATCCTCTCTGA 58.006 55.000 21.02 0.00 45.13 3.27
698 726 2.022195 CTAACGGGATTCTCGGAGTCA 58.978 52.381 11.23 0.00 0.00 3.41
730 758 0.173708 GCCGACTCGATCAAACTCCT 59.826 55.000 0.00 0.00 0.00 3.69
731 759 0.108804 TGCCGACTCGATCAAACTCC 60.109 55.000 0.00 0.00 0.00 3.85
735 763 1.798223 CTGTTTGCCGACTCGATCAAA 59.202 47.619 0.00 7.28 31.31 2.69
795 824 3.113979 CGTGTGCTGCGCTGATGA 61.114 61.111 19.32 0.00 0.00 2.92
796 825 4.156622 CCGTGTGCTGCGCTGATG 62.157 66.667 19.32 2.64 0.00 3.07
797 826 3.760965 TATTCCGTGTGCTGCGCTGAT 62.761 52.381 19.32 2.39 0.00 2.90
830 861 4.949125 GTTCGTTTGCGGCGCGTT 62.949 61.111 28.09 0.00 38.89 4.84
834 865 4.676586 GGTGGTTCGTTTGCGGCG 62.677 66.667 0.51 0.51 38.89 6.46
835 866 2.999363 CTTGGTGGTTCGTTTGCGGC 62.999 60.000 0.00 0.00 38.89 6.53
836 867 1.008995 CTTGGTGGTTCGTTTGCGG 60.009 57.895 0.00 0.00 38.89 5.69
837 868 1.657181 GCTTGGTGGTTCGTTTGCG 60.657 57.895 0.00 0.00 39.92 4.85
838 869 1.299850 GGCTTGGTGGTTCGTTTGC 60.300 57.895 0.00 0.00 0.00 3.68
839 870 0.457851 TTGGCTTGGTGGTTCGTTTG 59.542 50.000 0.00 0.00 0.00 2.93
840 871 0.458260 GTTGGCTTGGTGGTTCGTTT 59.542 50.000 0.00 0.00 0.00 3.60
870 901 2.065906 GAAGAGAGGAGCGTAGGCCG 62.066 65.000 3.28 0.00 41.24 6.13
871 902 1.737201 GAAGAGAGGAGCGTAGGCC 59.263 63.158 3.28 0.00 41.24 5.19
875 906 0.395862 CTGGGGAAGAGAGGAGCGTA 60.396 60.000 0.00 0.00 0.00 4.42
889 920 4.087892 CCCTCTCGTGTGCTGGGG 62.088 72.222 0.00 0.00 34.46 4.96
971 1002 1.386057 GGGGGTGAAGGGAGCCTAT 60.386 63.158 0.00 0.00 31.13 2.57
972 1003 2.042261 GGGGGTGAAGGGAGCCTA 59.958 66.667 0.00 0.00 31.13 3.93
973 1004 3.952799 GAGGGGGTGAAGGGAGCCT 62.953 68.421 0.00 0.00 33.70 4.58
974 1005 3.412408 GAGGGGGTGAAGGGAGCC 61.412 72.222 0.00 0.00 0.00 4.70
988 1019 4.101077 AGCAGGGAGGGAGGGAGG 62.101 72.222 0.00 0.00 0.00 4.30
989 1020 2.445654 GAGCAGGGAGGGAGGGAG 60.446 72.222 0.00 0.00 0.00 4.30
990 1021 4.095400 GGAGCAGGGAGGGAGGGA 62.095 72.222 0.00 0.00 0.00 4.20
1128 1174 3.391382 CCGGAGTCCACCACCTCC 61.391 72.222 10.49 0.00 43.20 4.30
1129 1175 4.083862 GCCGGAGTCCACCACCTC 62.084 72.222 5.05 0.00 0.00 3.85
1207 1253 1.594331 GAAATGATGAGGGGCCGTAC 58.406 55.000 0.00 0.00 0.00 3.67
1257 1303 3.371591 GGATACGTAGAGAGCCGATACAG 59.628 52.174 0.08 0.00 0.00 2.74
1279 1325 2.802667 CGAGTCCATCTTTGCCGCG 61.803 63.158 0.00 0.00 0.00 6.46
1281 1327 2.464459 GGCGAGTCCATCTTTGCCG 61.464 63.158 0.00 0.00 37.91 5.69
1405 1454 2.166007 CGAAGAAAATTAGCCAACGCG 58.834 47.619 3.53 3.53 41.18 6.01
1455 1505 1.656818 AATTCGCAAGCCGGTCATGG 61.657 55.000 1.90 0.00 37.59 3.66
1479 1529 2.295253 ATAGAGGCCGACAAAACGAG 57.705 50.000 0.00 0.00 35.09 4.18
1488 1538 1.913419 ACCAGGAAAAATAGAGGCCGA 59.087 47.619 0.00 0.00 0.00 5.54
1493 1543 7.880195 TCTCTTGAGAAACCAGGAAAAATAGAG 59.120 37.037 0.00 0.00 0.00 2.43
1532 1582 1.066645 TGCACCAACAACACATGCAAA 60.067 42.857 0.00 0.00 43.00 3.68
1776 1826 4.776322 TCTGGGAACGGCGGCATG 62.776 66.667 13.24 0.00 36.33 4.06
1777 1827 3.344137 AATCTGGGAACGGCGGCAT 62.344 57.895 13.24 0.00 36.33 4.40
1797 1847 2.666317 TCACAGATAGGCCTGATTCGA 58.334 47.619 17.99 1.64 37.59 3.71
1798 1848 3.674528 ATCACAGATAGGCCTGATTCG 57.325 47.619 17.99 8.62 37.59 3.34
1802 1852 9.288576 CAAAATTATAATCACAGATAGGCCTGA 57.711 33.333 17.99 3.56 37.59 3.86
1803 1853 8.517878 CCAAAATTATAATCACAGATAGGCCTG 58.482 37.037 17.99 0.72 39.93 4.85
1804 1854 8.227507 ACCAAAATTATAATCACAGATAGGCCT 58.772 33.333 11.78 11.78 0.00 5.19
1805 1855 8.299570 CACCAAAATTATAATCACAGATAGGCC 58.700 37.037 0.00 0.00 0.00 5.19
1806 1856 7.809806 GCACCAAAATTATAATCACAGATAGGC 59.190 37.037 0.00 0.00 0.00 3.93
1807 1857 9.071276 AGCACCAAAATTATAATCACAGATAGG 57.929 33.333 0.00 0.00 0.00 2.57
1809 1859 9.851686 AGAGCACCAAAATTATAATCACAGATA 57.148 29.630 0.00 0.00 0.00 1.98
1810 1860 8.627403 CAGAGCACCAAAATTATAATCACAGAT 58.373 33.333 0.00 0.00 0.00 2.90
1811 1861 7.611467 ACAGAGCACCAAAATTATAATCACAGA 59.389 33.333 0.00 0.00 0.00 3.41
1812 1862 7.765307 ACAGAGCACCAAAATTATAATCACAG 58.235 34.615 0.00 0.00 0.00 3.66
1813 1863 7.701539 ACAGAGCACCAAAATTATAATCACA 57.298 32.000 0.00 0.00 0.00 3.58
1814 1864 8.986477 AAACAGAGCACCAAAATTATAATCAC 57.014 30.769 0.00 0.00 0.00 3.06
1815 1865 9.023962 AGAAACAGAGCACCAAAATTATAATCA 57.976 29.630 0.00 0.00 0.00 2.57
1816 1866 9.294030 CAGAAACAGAGCACCAAAATTATAATC 57.706 33.333 0.00 0.00 0.00 1.75
1817 1867 7.761249 GCAGAAACAGAGCACCAAAATTATAAT 59.239 33.333 0.00 0.00 0.00 1.28
1818 1868 7.039784 AGCAGAAACAGAGCACCAAAATTATAA 60.040 33.333 0.00 0.00 0.00 0.98
1819 1869 6.434028 AGCAGAAACAGAGCACCAAAATTATA 59.566 34.615 0.00 0.00 0.00 0.98
1820 1870 5.244626 AGCAGAAACAGAGCACCAAAATTAT 59.755 36.000 0.00 0.00 0.00 1.28
1821 1871 4.584325 AGCAGAAACAGAGCACCAAAATTA 59.416 37.500 0.00 0.00 0.00 1.40
1822 1872 3.385755 AGCAGAAACAGAGCACCAAAATT 59.614 39.130 0.00 0.00 0.00 1.82
1860 1910 8.822855 CACAAGTACAGTAAAACAGTACATTCA 58.177 33.333 13.13 0.00 41.66 2.57
1862 1912 7.497909 AGCACAAGTACAGTAAAACAGTACATT 59.502 33.333 13.13 4.54 41.66 2.71
1863 1913 6.990349 AGCACAAGTACAGTAAAACAGTACAT 59.010 34.615 13.13 1.35 41.66 2.29
1864 1914 6.256975 CAGCACAAGTACAGTAAAACAGTACA 59.743 38.462 13.13 0.00 41.66 2.90
1866 1916 6.342906 ACAGCACAAGTACAGTAAAACAGTA 58.657 36.000 0.00 0.00 0.00 2.74
1867 1917 5.183228 ACAGCACAAGTACAGTAAAACAGT 58.817 37.500 0.00 0.00 0.00 3.55
1868 1918 5.734855 ACAGCACAAGTACAGTAAAACAG 57.265 39.130 0.00 0.00 0.00 3.16
1875 2018 4.873746 AGTCATACAGCACAAGTACAGT 57.126 40.909 0.00 0.00 0.00 3.55
1881 2024 2.095567 GGCACAAGTCATACAGCACAAG 60.096 50.000 0.00 0.00 0.00 3.16
1882 2025 1.879380 GGCACAAGTCATACAGCACAA 59.121 47.619 0.00 0.00 0.00 3.33
1888 2031 7.445096 CCTAATGAATATGGCACAAGTCATACA 59.555 37.037 13.05 5.91 44.46 2.29
1911 2054 9.725206 AGTCTTTTACCCTGAATAATACTCCTA 57.275 33.333 0.00 0.00 0.00 2.94
1913 2056 7.652507 CGAGTCTTTTACCCTGAATAATACTCC 59.347 40.741 0.00 0.00 0.00 3.85
1914 2057 8.196103 ACGAGTCTTTTACCCTGAATAATACTC 58.804 37.037 0.00 0.00 0.00 2.59
1916 2059 8.601476 CAACGAGTCTTTTACCCTGAATAATAC 58.399 37.037 0.00 0.00 0.00 1.89
1917 2060 8.533657 TCAACGAGTCTTTTACCCTGAATAATA 58.466 33.333 0.00 0.00 0.00 0.98
1918 2061 7.391620 TCAACGAGTCTTTTACCCTGAATAAT 58.608 34.615 0.00 0.00 0.00 1.28
1919 2062 6.761312 TCAACGAGTCTTTTACCCTGAATAA 58.239 36.000 0.00 0.00 0.00 1.40
1943 3562 3.352447 CGTCAGCCGTGATCAGAAT 57.648 52.632 0.00 0.00 34.36 2.40
2000 3619 6.306356 CAGTTGTCTGTTGTCAAACAAGAAAG 59.694 38.462 2.26 0.00 45.50 2.62
2066 3685 1.758122 GGATGCCAATGGACCCCAC 60.758 63.158 2.05 0.00 35.80 4.61
2145 3764 3.405831 TGATGAAGCAACTGACAGAAGG 58.594 45.455 10.08 0.00 0.00 3.46
2171 3790 8.902806 CCCAAGTTAGCATGAAATCAAACTATA 58.097 33.333 0.00 0.00 0.00 1.31
2172 3791 7.615365 TCCCAAGTTAGCATGAAATCAAACTAT 59.385 33.333 0.00 0.00 0.00 2.12
2173 3792 6.945435 TCCCAAGTTAGCATGAAATCAAACTA 59.055 34.615 0.00 0.00 0.00 2.24
2174 3793 5.774690 TCCCAAGTTAGCATGAAATCAAACT 59.225 36.000 0.00 0.00 0.00 2.66
2175 3794 6.024552 TCCCAAGTTAGCATGAAATCAAAC 57.975 37.500 0.00 0.00 0.00 2.93
2193 3812 5.306937 TCAGACTTTCAGTTATGACTCCCAA 59.693 40.000 0.00 0.00 34.35 4.12
2194 3813 4.838423 TCAGACTTTCAGTTATGACTCCCA 59.162 41.667 0.00 0.00 34.35 4.37
2197 3816 5.350091 GGCTTCAGACTTTCAGTTATGACTC 59.650 44.000 0.00 0.00 34.35 3.36
2199 3818 5.121454 CAGGCTTCAGACTTTCAGTTATGAC 59.879 44.000 0.00 0.00 34.35 3.06
2219 3838 2.032681 AAGAACGGGCAGACAGGC 59.967 61.111 0.00 0.00 43.27 4.85
2229 3848 4.222114 GCAAGAGAAATGAACAAGAACGG 58.778 43.478 0.00 0.00 0.00 4.44
2241 3860 5.299949 GGTTCAACCAAATGCAAGAGAAAT 58.700 37.500 0.01 0.00 38.42 2.17
2266 3885 6.379133 ACACACCGGACAAGAGATTTACTATA 59.621 38.462 9.46 0.00 0.00 1.31
2478 4097 1.095600 TGGAGATGACGTCGAGGAAG 58.904 55.000 12.85 0.00 0.00 3.46
2512 4131 4.828939 TGATGACTCAAAGGAAAGCATTGT 59.171 37.500 0.00 0.00 0.00 2.71
2513 4132 5.381174 TGATGACTCAAAGGAAAGCATTG 57.619 39.130 0.00 0.00 0.00 2.82
2514 4133 6.409524 TTTGATGACTCAAAGGAAAGCATT 57.590 33.333 0.00 0.00 44.46 3.56
2524 4143 6.460123 GCCTCTTTCAGTTTTGATGACTCAAA 60.460 38.462 0.00 0.00 46.92 2.69
2525 4144 5.009010 GCCTCTTTCAGTTTTGATGACTCAA 59.991 40.000 0.00 0.00 39.62 3.02
2526 4145 4.516698 GCCTCTTTCAGTTTTGATGACTCA 59.483 41.667 0.00 0.00 32.27 3.41
2527 4146 4.516698 TGCCTCTTTCAGTTTTGATGACTC 59.483 41.667 0.00 0.00 32.27 3.36
2530 4149 4.036734 GTGTGCCTCTTTCAGTTTTGATGA 59.963 41.667 0.00 0.00 32.27 2.92
2531 4150 4.037208 AGTGTGCCTCTTTCAGTTTTGATG 59.963 41.667 0.00 0.00 32.27 3.07
2532 4151 4.037208 CAGTGTGCCTCTTTCAGTTTTGAT 59.963 41.667 0.00 0.00 32.27 2.57
2533 4152 3.378112 CAGTGTGCCTCTTTCAGTTTTGA 59.622 43.478 0.00 0.00 0.00 2.69
2537 4156 1.312815 GCAGTGTGCCTCTTTCAGTT 58.687 50.000 0.00 0.00 37.42 3.16
2549 4175 4.501559 CACTGTCAATTTTTCTGCAGTGTG 59.498 41.667 14.67 4.39 44.87 3.82
2554 4180 3.376859 ACGACACTGTCAATTTTTCTGCA 59.623 39.130 9.84 0.00 32.09 4.41
2564 4191 1.866601 CAGCATCAACGACACTGTCAA 59.133 47.619 9.84 0.00 32.09 3.18
2572 4199 1.207593 GCACCACAGCATCAACGAC 59.792 57.895 0.00 0.00 0.00 4.34
2754 4381 2.948134 GCGTCGTAGCCGTACAGC 60.948 66.667 0.00 0.00 35.01 4.40
2973 4600 4.151582 CCGTACCGGCCGTGGAAT 62.152 66.667 26.12 6.36 41.17 3.01
3036 4663 1.153349 GAGGCCGCCGAAGAAGAAT 60.153 57.895 3.05 0.00 0.00 2.40
3372 4999 1.745489 GATCCACAGGAACGCCACC 60.745 63.158 0.00 0.00 34.34 4.61
3438 5065 2.423577 GCGTAGTTGAAGGTGTCCATT 58.576 47.619 0.00 0.00 0.00 3.16
3507 5134 2.432628 CACTTCCTGGCGTCGACC 60.433 66.667 10.58 2.55 0.00 4.79
3577 5204 2.751436 ATTGCCATTGCCGTCGCT 60.751 55.556 0.00 0.00 36.33 4.93
3619 5246 3.193263 ACACATGACTTGATCGAGCATC 58.807 45.455 3.25 0.00 0.00 3.91
3632 5259 5.971202 ACGAAAAAGAATGACAACACATGAC 59.029 36.000 0.00 0.00 0.00 3.06
3657 5284 4.969196 ACACACACGCAGAGCCCG 62.969 66.667 0.00 0.00 0.00 6.13
3699 5390 6.205784 TGAAAATGTTTGATTTCGTCAGGTC 58.794 36.000 0.00 0.00 38.16 3.85
3785 5476 7.051000 GGTACTCCTTTCTATTCATTTCAGCT 58.949 38.462 0.00 0.00 0.00 4.24
3824 5515 8.864069 TGAATAAATCAAAAGTTTTCTCGCAA 57.136 26.923 0.00 0.00 34.30 4.85
3825 5516 9.128107 GATGAATAAATCAAAAGTTTTCTCGCA 57.872 29.630 0.00 0.00 42.54 5.10
3855 5546 8.729756 TCTGATGTTCGTTTTATTGTCATGATT 58.270 29.630 0.00 0.00 0.00 2.57
3888 5579 8.262227 TGGTCTACGGATCTACATGTAATTTTT 58.738 33.333 7.06 0.00 0.00 1.94
3958 5649 4.554036 GGGAGGGGCGATGACTGC 62.554 72.222 0.00 0.00 0.00 4.40
4022 5713 0.469917 CCATGGGACCTTAGCACGAT 59.530 55.000 2.85 0.00 0.00 3.73
4186 5878 0.248289 GAACATGCAGGCAGCCAAAT 59.752 50.000 15.80 0.37 44.83 2.32
4217 5909 0.812549 TGCGTAGAGGCATCGTTACA 59.187 50.000 0.00 0.00 38.17 2.41
4559 6252 1.492176 CCTCCCGGTCCTACTACACTA 59.508 57.143 0.00 0.00 0.00 2.74
4588 6281 2.347939 CGTCATCATCGCCATTCTTTCG 60.348 50.000 0.00 0.00 0.00 3.46
4673 6368 0.397187 TCTCGCTCGCCTCCTACTAT 59.603 55.000 0.00 0.00 0.00 2.12
4786 6481 2.203788 TCAACCTCCGCTCCCACT 60.204 61.111 0.00 0.00 0.00 4.00
4794 6489 0.109226 GTCGTTCCTCTCAACCTCCG 60.109 60.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.