Multiple sequence alignment - TraesCS2A01G302700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G302700 chr2A 100.000 4555 0 0 1 4555 519532879 519528325 0.000000e+00 8412.0
1 TraesCS2A01G302700 chr2A 88.226 654 53 9 1 630 606776679 606776026 0.000000e+00 760.0
2 TraesCS2A01G302700 chr2A 91.002 489 25 5 1 471 689163508 689163021 3.840000e-180 641.0
3 TraesCS2A01G302700 chr2A 94.788 307 15 1 4249 4555 76852153 76852458 1.150000e-130 477.0
4 TraesCS2A01G302700 chr2A 94.137 307 18 0 4249 4555 182348761 182349067 6.900000e-128 468.0
5 TraesCS2A01G302700 chr2A 93.831 308 17 2 4249 4555 486019714 486019408 3.210000e-126 462.0
6 TraesCS2A01G302700 chr2A 93.811 307 19 0 4249 4555 519520176 519519870 3.210000e-126 462.0
7 TraesCS2A01G302700 chr2A 80.000 150 30 0 2644 2793 768121463 768121612 1.340000e-20 111.0
8 TraesCS2A01G302700 chr2A 77.473 182 33 7 2613 2790 133354189 133354012 8.060000e-18 102.0
9 TraesCS2A01G302700 chr2A 83.962 106 17 0 2294 2399 768121092 768121197 8.060000e-18 102.0
10 TraesCS2A01G302700 chr2A 95.652 46 2 0 1983 2028 10459244 10459289 1.760000e-09 75.0
11 TraesCS2A01G302700 chr2B 91.068 1433 62 26 2276 3675 454343925 454342526 0.000000e+00 1877.0
12 TraesCS2A01G302700 chr2B 89.097 1229 74 20 697 1906 454345154 454343967 0.000000e+00 1472.0
13 TraesCS2A01G302700 chr2B 83.850 613 65 12 3661 4248 454342508 454341905 1.850000e-153 553.0
14 TraesCS2A01G302700 chr2B 97.727 44 1 0 1985 2028 94195945 94195988 4.890000e-10 76.8
15 TraesCS2A01G302700 chr2B 86.792 53 7 0 658 710 454345792 454345740 4.920000e-05 60.2
16 TraesCS2A01G302700 chr2D 88.024 1144 81 14 3155 4247 384250924 384249786 0.000000e+00 1303.0
17 TraesCS2A01G302700 chr2D 94.496 854 32 5 2280 3133 384251837 384250999 0.000000e+00 1303.0
18 TraesCS2A01G302700 chr2D 90.860 919 47 13 637 1553 384253220 384252337 0.000000e+00 1197.0
19 TraesCS2A01G302700 chr2D 88.854 646 54 8 1 629 511531387 511530743 0.000000e+00 778.0
20 TraesCS2A01G302700 chr2D 88.099 647 59 4 1 630 201455637 201454992 0.000000e+00 752.0
21 TraesCS2A01G302700 chr2D 87.751 449 41 12 1 441 429201998 429201556 3.140000e-141 512.0
22 TraesCS2A01G302700 chr2D 83.893 447 35 21 1563 1987 384252272 384251841 4.270000e-105 392.0
23 TraesCS2A01G302700 chr2D 85.185 108 12 2 2294 2399 643230623 643230728 1.730000e-19 108.0
24 TraesCS2A01G302700 chr2D 79.333 150 31 0 2644 2793 643231010 643231159 6.230000e-19 106.0
25 TraesCS2A01G302700 chr2D 73.540 291 63 13 2507 2790 126891336 126891053 1.040000e-16 99.0
26 TraesCS2A01G302700 chr2D 97.674 43 1 0 1986 2028 629253463 629253505 1.760000e-09 75.0
27 TraesCS2A01G302700 chr2D 92.157 51 2 1 4182 4230 74971998 74971948 2.270000e-08 71.3
28 TraesCS2A01G302700 chr2D 100.000 34 0 0 3135 3168 384250974 384250941 3.800000e-06 63.9
29 TraesCS2A01G302700 chr5A 89.269 643 52 11 1 629 32737929 32737290 0.000000e+00 789.0
30 TraesCS2A01G302700 chr5A 88.563 647 56 4 1 630 631063265 631063910 0.000000e+00 769.0
31 TraesCS2A01G302700 chr5A 88.154 650 53 10 1 630 510478710 510479355 0.000000e+00 752.0
32 TraesCS2A01G302700 chr5A 94.841 252 13 0 2029 2280 697753437 697753186 1.190000e-105 394.0
33 TraesCS2A01G302700 chr4D 88.700 646 55 4 1 629 85887925 85887281 0.000000e+00 773.0
34 TraesCS2A01G302700 chr4D 91.729 266 9 8 1 253 488494000 488493735 1.560000e-94 357.0
35 TraesCS2A01G302700 chr4D 97.674 43 1 0 1986 2028 477410543 477410501 1.760000e-09 75.0
36 TraesCS2A01G302700 chr3A 88.563 647 57 3 1 630 532658222 532658868 0.000000e+00 769.0
37 TraesCS2A01G302700 chr3A 87.850 642 58 6 6 630 12825314 12825952 0.000000e+00 736.0
38 TraesCS2A01G302700 chr3A 92.476 319 23 1 4237 4555 187374696 187374379 5.370000e-124 455.0
39 TraesCS2A01G302700 chr3A 97.561 246 6 0 2029 2274 741161822 741162067 5.450000e-114 422.0
40 TraesCS2A01G302700 chr3A 97.154 246 7 0 2029 2274 15505553 15505308 2.530000e-112 416.0
41 TraesCS2A01G302700 chr3A 97.154 246 7 0 2029 2274 455786398 455786643 2.530000e-112 416.0
42 TraesCS2A01G302700 chr3A 76.879 173 31 9 4079 4247 489053872 489053705 6.280000e-14 89.8
43 TraesCS2A01G302700 chr5D 88.426 648 47 6 1 630 410393444 410394081 0.000000e+00 756.0
44 TraesCS2A01G302700 chr5D 88.099 647 56 12 1 630 493830269 493830911 0.000000e+00 749.0
45 TraesCS2A01G302700 chr5D 78.613 173 31 5 4079 4249 536876849 536877017 4.820000e-20 110.0
46 TraesCS2A01G302700 chr7D 88.354 644 52 7 1 630 159701457 159700823 0.000000e+00 752.0
47 TraesCS2A01G302700 chr7D 93.878 49 3 0 1980 2028 283345288 283345336 1.760000e-09 75.0
48 TraesCS2A01G302700 chr7A 86.625 643 61 9 1 628 207894054 207893422 0.000000e+00 688.0
49 TraesCS2A01G302700 chr7A 94.788 307 14 2 4250 4555 585631062 585630757 1.150000e-130 477.0
50 TraesCS2A01G302700 chr7A 95.935 246 10 0 2029 2274 348601752 348601997 2.550000e-107 399.0
51 TraesCS2A01G302700 chr1A 94.156 308 15 3 4249 4554 540600769 540600463 2.480000e-127 466.0
52 TraesCS2A01G302700 chr1A 93.485 307 18 2 4250 4555 243995404 243995099 5.370000e-124 455.0
53 TraesCS2A01G302700 chr1A 77.703 148 27 5 4086 4229 56625708 56625853 8.120000e-13 86.1
54 TraesCS2A01G302700 chr6A 93.831 308 18 1 4249 4555 433237807 433237500 3.210000e-126 462.0
55 TraesCS2A01G302700 chr5B 96.748 246 8 0 2029 2274 694905015 694905260 1.180000e-110 411.0
56 TraesCS2A01G302700 chr5B 96.748 246 8 0 2029 2274 695146666 695146911 1.180000e-110 411.0
57 TraesCS2A01G302700 chr5B 96.748 246 8 0 2029 2274 695192930 695193175 1.180000e-110 411.0
58 TraesCS2A01G302700 chr5B 95.968 248 8 1 2029 2274 400437425 400437672 7.100000e-108 401.0
59 TraesCS2A01G302700 chr5B 95.238 252 12 0 2029 2280 183153758 183153507 2.550000e-107 399.0
60 TraesCS2A01G302700 chr4B 96.386 249 9 0 2031 2279 286183271 286183023 1.180000e-110 411.0
61 TraesCS2A01G302700 chr1B 95.038 262 11 2 2029 2289 448334077 448333817 1.180000e-110 411.0
62 TraesCS2A01G302700 chr1B 96.748 246 8 0 2029 2274 523223129 523222884 1.180000e-110 411.0
63 TraesCS2A01G302700 chr1B 95.294 255 11 1 2029 2282 559106815 559107069 1.970000e-108 403.0
64 TraesCS2A01G302700 chr3B 94.841 252 13 0 2029 2280 717991546 717991295 1.190000e-105 394.0
65 TraesCS2A01G302700 chr6B 94.163 257 15 0 2029 2285 346812996 346813252 4.270000e-105 392.0
66 TraesCS2A01G302700 chr6B 95.732 164 7 0 2106 2269 497258452 497258289 9.720000e-67 265.0
67 TraesCS2A01G302700 chr6B 95.556 45 2 0 1984 2028 620905253 620905209 6.320000e-09 73.1
68 TraesCS2A01G302700 chr3D 95.968 124 5 0 1 124 83700676 83700799 7.730000e-48 202.0
69 TraesCS2A01G302700 chr3D 80.851 188 31 5 2094 2280 114674412 114674229 4.750000e-30 143.0
70 TraesCS2A01G302700 chr4A 80.117 171 29 4 4079 4249 633072445 633072280 6.190000e-24 122.0
71 TraesCS2A01G302700 chr4A 80.488 123 20 3 4125 4244 578218103 578217982 1.750000e-14 91.6
72 TraesCS2A01G302700 chrUn 84.906 106 16 0 2294 2399 31713091 31713196 1.730000e-19 108.0
73 TraesCS2A01G302700 chrUn 76.316 190 43 2 2606 2794 31713542 31713730 2.900000e-17 100.0
74 TraesCS2A01G302700 chr1D 79.730 148 24 5 4086 4229 57504566 57504711 8.060000e-18 102.0
75 TraesCS2A01G302700 chr6D 97.826 46 1 0 1982 2027 427346799 427346754 3.780000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G302700 chr2A 519528325 519532879 4554 True 8412.00 8412 100.00000 1 4555 1 chr2A.!!$R4 4554
1 TraesCS2A01G302700 chr2A 606776026 606776679 653 True 760.00 760 88.22600 1 630 1 chr2A.!!$R5 629
2 TraesCS2A01G302700 chr2B 454341905 454345792 3887 True 990.55 1877 87.70175 658 4248 4 chr2B.!!$R1 3590
3 TraesCS2A01G302700 chr2D 384249786 384253220 3434 True 851.78 1303 91.45460 637 4247 5 chr2D.!!$R6 3610
4 TraesCS2A01G302700 chr2D 511530743 511531387 644 True 778.00 778 88.85400 1 629 1 chr2D.!!$R5 628
5 TraesCS2A01G302700 chr2D 201454992 201455637 645 True 752.00 752 88.09900 1 630 1 chr2D.!!$R3 629
6 TraesCS2A01G302700 chr5A 32737290 32737929 639 True 789.00 789 89.26900 1 629 1 chr5A.!!$R1 628
7 TraesCS2A01G302700 chr5A 631063265 631063910 645 False 769.00 769 88.56300 1 630 1 chr5A.!!$F2 629
8 TraesCS2A01G302700 chr5A 510478710 510479355 645 False 752.00 752 88.15400 1 630 1 chr5A.!!$F1 629
9 TraesCS2A01G302700 chr4D 85887281 85887925 644 True 773.00 773 88.70000 1 629 1 chr4D.!!$R1 628
10 TraesCS2A01G302700 chr3A 532658222 532658868 646 False 769.00 769 88.56300 1 630 1 chr3A.!!$F3 629
11 TraesCS2A01G302700 chr3A 12825314 12825952 638 False 736.00 736 87.85000 6 630 1 chr3A.!!$F1 624
12 TraesCS2A01G302700 chr5D 410393444 410394081 637 False 756.00 756 88.42600 1 630 1 chr5D.!!$F1 629
13 TraesCS2A01G302700 chr5D 493830269 493830911 642 False 749.00 749 88.09900 1 630 1 chr5D.!!$F2 629
14 TraesCS2A01G302700 chr7D 159700823 159701457 634 True 752.00 752 88.35400 1 630 1 chr7D.!!$R1 629
15 TraesCS2A01G302700 chr7A 207893422 207894054 632 True 688.00 688 86.62500 1 628 1 chr7A.!!$R1 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
630 659 0.107897 TGACGGATGAAATGGGTCGG 60.108 55.0 0.0 0.0 30.16 4.79 F
634 663 0.179018 GGATGAAATGGGTCGGGGAG 60.179 60.0 0.0 0.0 0.00 4.30 F
1844 2560 0.036388 GGTGTCTGCTCCAATTCGGA 60.036 55.0 0.0 0.0 43.61 4.55 F
2338 3057 0.108992 TGGACATGTACGACTTCCGC 60.109 55.0 3.0 0.0 43.32 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1506 2141 0.100503 GACGGAAGAGAGAGCAGAGC 59.899 60.0 0.00 0.00 0.00 4.09 R
1858 2574 0.532573 GAGGACTGAATGCGACCAGA 59.467 55.0 6.12 0.00 34.65 3.86 R
3327 4111 0.688487 AAACATTGGCAGGCAAGCAT 59.312 45.0 15.57 0.02 35.83 3.79 R
4301 5167 0.036010 ACCTATCATGCGGCTATGCC 60.036 55.0 0.00 0.00 46.75 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 150 2.749044 CTGGTGATGCGCTGCCTT 60.749 61.111 9.73 0.00 0.00 4.35
271 286 1.549243 TAGGGTTGTCGCTGGCATGA 61.549 55.000 0.00 0.00 37.93 3.07
328 351 4.530857 GTGGATGAGGACGGCCCG 62.531 72.222 1.76 0.00 40.87 6.13
389 412 3.327404 CGTGGGCCCAAGGTAGGT 61.327 66.667 30.64 0.00 0.00 3.08
390 413 1.991167 CGTGGGCCCAAGGTAGGTA 60.991 63.158 30.64 0.00 0.00 3.08
512 540 2.067766 GCATTCAAGGCGCAATTTTGA 58.932 42.857 10.83 10.62 0.00 2.69
520 548 1.455408 GGCGCAATTTTGAACCGAAAG 59.545 47.619 10.83 0.00 0.00 2.62
574 602 4.912485 TTTGGGTCGGCGCGTTGA 62.912 61.111 8.43 2.59 0.00 3.18
618 647 2.026262 ACCCAAACTTATGCTGACGGAT 60.026 45.455 0.00 0.00 0.00 4.18
630 659 0.107897 TGACGGATGAAATGGGTCGG 60.108 55.000 0.00 0.00 30.16 4.79
631 660 0.814010 GACGGATGAAATGGGTCGGG 60.814 60.000 0.00 0.00 0.00 5.14
632 661 1.525995 CGGATGAAATGGGTCGGGG 60.526 63.158 0.00 0.00 0.00 5.73
633 662 1.919771 GGATGAAATGGGTCGGGGA 59.080 57.895 0.00 0.00 0.00 4.81
634 663 0.179018 GGATGAAATGGGTCGGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
635 664 0.546598 GATGAAATGGGTCGGGGAGT 59.453 55.000 0.00 0.00 0.00 3.85
651 680 0.984995 GAGTTGCTCTAACACCCCCT 59.015 55.000 0.00 0.00 41.88 4.79
662 692 5.319453 TCTAACACCCCCTATCGTAGTATG 58.681 45.833 0.00 0.00 0.00 2.39
665 695 3.117398 ACACCCCCTATCGTAGTATGACA 60.117 47.826 0.00 0.00 0.00 3.58
666 696 3.893200 CACCCCCTATCGTAGTATGACAA 59.107 47.826 0.00 0.00 0.00 3.18
712 1342 3.512516 GCAACTGGATGAGCCCGC 61.513 66.667 0.00 0.00 34.97 6.13
764 1394 2.126596 CATGGGGCCAAGCGCAATA 61.127 57.895 11.47 0.00 43.41 1.90
765 1395 1.381056 ATGGGGCCAAGCGCAATAA 60.381 52.632 11.47 0.00 43.41 1.40
766 1396 1.675720 ATGGGGCCAAGCGCAATAAC 61.676 55.000 11.47 0.00 43.41 1.89
767 1397 2.347322 GGGGCCAAGCGCAATAACA 61.347 57.895 11.47 0.00 43.41 2.41
783 1413 3.029735 CAAACAAACGCCGCAGCC 61.030 61.111 0.00 0.00 34.57 4.85
796 1426 2.758089 GCAGCCAGCGACCAAGATG 61.758 63.158 0.00 0.00 0.00 2.90
1108 1743 3.993584 TACGCTCGCCGGTGGTTT 61.994 61.111 16.49 0.00 42.52 3.27
1109 1744 3.518419 TACGCTCGCCGGTGGTTTT 62.518 57.895 16.49 0.06 42.52 2.43
1469 2104 1.886313 CATCGCCGAGCAGCTCAAT 60.886 57.895 22.49 6.95 0.00 2.57
1479 2114 1.281287 AGCAGCTCAATGTGAGTCCAT 59.719 47.619 7.08 0.00 45.94 3.41
1505 2140 4.567385 GCTCTCGCTCCCGCTCTG 62.567 72.222 0.00 0.00 0.00 3.35
1506 2141 3.898509 CTCTCGCTCCCGCTCTGG 61.899 72.222 0.00 0.00 37.55 3.86
1525 2160 0.100503 GCTCTGCTCTCTCTTCCGTC 59.899 60.000 0.00 0.00 0.00 4.79
1556 2191 1.956629 CTGTGGGACCGGCGAGTATT 61.957 60.000 9.30 0.00 0.00 1.89
1557 2192 0.683828 TGTGGGACCGGCGAGTATTA 60.684 55.000 9.30 0.00 0.00 0.98
1581 2270 1.555075 TCCATGTTAGACCCTGTCAGC 59.445 52.381 0.00 0.00 34.60 4.26
1586 2275 2.167398 TTAGACCCTGTCAGCGTGCC 62.167 60.000 0.00 0.00 34.60 5.01
1630 2319 3.482786 GACGCAACACATGTCAAAGATC 58.517 45.455 0.00 0.00 32.91 2.75
1728 2426 3.599792 CTTGCTTGGAGCGTTGGCG 62.600 63.158 0.00 0.00 46.26 5.69
1757 2455 0.902531 TAGCTGCAAGGACTACCCAC 59.097 55.000 1.02 0.00 37.41 4.61
1798 2507 1.979693 GTGACGGGCACTCCTCTCT 60.980 63.158 6.76 0.00 44.27 3.10
1800 2509 0.832135 TGACGGGCACTCCTCTCTTT 60.832 55.000 0.00 0.00 0.00 2.52
1801 2510 0.390472 GACGGGCACTCCTCTCTTTG 60.390 60.000 0.00 0.00 0.00 2.77
1803 2512 0.895530 CGGGCACTCCTCTCTTTGTA 59.104 55.000 0.00 0.00 0.00 2.41
1805 2514 2.482142 CGGGCACTCCTCTCTTTGTATC 60.482 54.545 0.00 0.00 0.00 2.24
1806 2515 2.158885 GGGCACTCCTCTCTTTGTATCC 60.159 54.545 0.00 0.00 0.00 2.59
1807 2516 2.501723 GGCACTCCTCTCTTTGTATCCA 59.498 50.000 0.00 0.00 0.00 3.41
1814 2530 3.369892 CCTCTCTTTGTATCCAGTGTGGG 60.370 52.174 0.00 0.00 38.32 4.61
1844 2560 0.036388 GGTGTCTGCTCCAATTCGGA 60.036 55.000 0.00 0.00 43.61 4.55
1858 2574 2.684001 TTCGGATAGCACGTCCATTT 57.316 45.000 0.00 0.00 35.41 2.32
1871 2587 2.083774 GTCCATTTCTGGTCGCATTCA 58.916 47.619 0.00 0.00 43.61 2.57
1872 2588 2.096496 GTCCATTTCTGGTCGCATTCAG 59.904 50.000 0.00 0.00 43.61 3.02
1906 2622 3.401033 AAACACGATGTGATCTGTGGA 57.599 42.857 3.61 0.00 37.78 4.02
1907 2623 2.370281 ACACGATGTGATCTGTGGAC 57.630 50.000 3.61 0.00 37.78 4.02
1908 2624 1.271876 CACGATGTGATCTGTGGACG 58.728 55.000 0.00 0.00 35.23 4.79
1911 2627 0.824109 GATGTGATCTGTGGACGGGA 59.176 55.000 0.00 0.00 0.00 5.14
1938 2657 3.959449 AGTCCCTCGGAATTACTACTTCC 59.041 47.826 0.00 0.00 39.06 3.46
1941 2660 4.161001 TCCCTCGGAATTACTACTTCCAAC 59.839 45.833 6.13 0.00 41.94 3.77
1962 2681 4.908736 ACGTAAAATTGATGCCATTCTCG 58.091 39.130 0.00 0.00 0.00 4.04
1990 2709 1.836166 GGGTTAGGTCCCAAGTACTCC 59.164 57.143 0.00 0.00 46.30 3.85
1991 2710 1.836166 GGTTAGGTCCCAAGTACTCCC 59.164 57.143 0.00 0.00 0.00 4.30
1992 2711 2.561526 GGTTAGGTCCCAAGTACTCCCT 60.562 54.545 0.00 0.00 0.00 4.20
1993 2712 3.179685 GTTAGGTCCCAAGTACTCCCTT 58.820 50.000 0.00 0.00 0.00 3.95
1994 2713 1.954035 AGGTCCCAAGTACTCCCTTC 58.046 55.000 0.00 0.00 0.00 3.46
1995 2714 0.535797 GGTCCCAAGTACTCCCTTCG 59.464 60.000 0.00 0.00 0.00 3.79
1996 2715 1.264295 GTCCCAAGTACTCCCTTCGT 58.736 55.000 0.00 0.00 0.00 3.85
1997 2716 1.622312 GTCCCAAGTACTCCCTTCGTT 59.378 52.381 0.00 0.00 0.00 3.85
1998 2717 2.038164 GTCCCAAGTACTCCCTTCGTTT 59.962 50.000 0.00 0.00 0.00 3.60
1999 2718 2.707257 TCCCAAGTACTCCCTTCGTTTT 59.293 45.455 0.00 0.00 0.00 2.43
2000 2719 3.136992 TCCCAAGTACTCCCTTCGTTTTT 59.863 43.478 0.00 0.00 0.00 1.94
2001 2720 4.347583 TCCCAAGTACTCCCTTCGTTTTTA 59.652 41.667 0.00 0.00 0.00 1.52
2002 2721 5.013391 TCCCAAGTACTCCCTTCGTTTTTAT 59.987 40.000 0.00 0.00 0.00 1.40
2003 2722 5.708697 CCCAAGTACTCCCTTCGTTTTTATT 59.291 40.000 0.00 0.00 0.00 1.40
2004 2723 6.208007 CCCAAGTACTCCCTTCGTTTTTATTT 59.792 38.462 0.00 0.00 0.00 1.40
2005 2724 7.391275 CCCAAGTACTCCCTTCGTTTTTATTTA 59.609 37.037 0.00 0.00 0.00 1.40
2006 2725 8.232513 CCAAGTACTCCCTTCGTTTTTATTTAC 58.767 37.037 0.00 0.00 0.00 2.01
2007 2726 8.996271 CAAGTACTCCCTTCGTTTTTATTTACT 58.004 33.333 0.00 0.00 0.00 2.24
2008 2727 8.768957 AGTACTCCCTTCGTTTTTATTTACTC 57.231 34.615 0.00 0.00 0.00 2.59
2009 2728 8.591940 AGTACTCCCTTCGTTTTTATTTACTCT 58.408 33.333 0.00 0.00 0.00 3.24
2010 2729 7.668525 ACTCCCTTCGTTTTTATTTACTCTG 57.331 36.000 0.00 0.00 0.00 3.35
2011 2730 7.222161 ACTCCCTTCGTTTTTATTTACTCTGT 58.778 34.615 0.00 0.00 0.00 3.41
2012 2731 8.370182 ACTCCCTTCGTTTTTATTTACTCTGTA 58.630 33.333 0.00 0.00 0.00 2.74
2013 2732 9.379791 CTCCCTTCGTTTTTATTTACTCTGTAT 57.620 33.333 0.00 0.00 0.00 2.29
2042 2761 8.621532 AGATTTGACTGTTTATTTACTCTGCA 57.378 30.769 0.00 0.00 0.00 4.41
2043 2762 9.236006 AGATTTGACTGTTTATTTACTCTGCAT 57.764 29.630 0.00 0.00 0.00 3.96
2061 2780 8.659925 CTCTGCATATTAGAGTTGACTGAAAT 57.340 34.615 5.84 0.00 37.48 2.17
2062 2781 8.654230 TCTGCATATTAGAGTTGACTGAAATC 57.346 34.615 0.00 0.00 0.00 2.17
2063 2782 8.260114 TCTGCATATTAGAGTTGACTGAAATCA 58.740 33.333 0.00 0.00 30.70 2.57
2064 2783 8.791327 TGCATATTAGAGTTGACTGAAATCAA 57.209 30.769 0.00 0.00 36.23 2.57
2065 2784 9.230122 TGCATATTAGAGTTGACTGAAATCAAA 57.770 29.630 0.00 0.00 40.22 2.69
2066 2785 9.495754 GCATATTAGAGTTGACTGAAATCAAAC 57.504 33.333 0.00 0.00 40.22 2.93
2070 2789 6.292389 AGAGTTGACTGAAATCAAACTTCG 57.708 37.500 1.69 0.00 40.22 3.79
2071 2790 5.817816 AGAGTTGACTGAAATCAAACTTCGT 59.182 36.000 1.69 0.00 40.22 3.85
2072 2791 6.984474 AGAGTTGACTGAAATCAAACTTCGTA 59.016 34.615 1.69 0.00 40.22 3.43
2073 2792 7.494625 AGAGTTGACTGAAATCAAACTTCGTAA 59.505 33.333 1.69 0.00 40.22 3.18
2074 2793 7.981142 AGTTGACTGAAATCAAACTTCGTAAA 58.019 30.769 0.00 0.00 40.22 2.01
2075 2794 8.122952 AGTTGACTGAAATCAAACTTCGTAAAG 58.877 33.333 0.00 0.00 40.22 1.85
2088 2807 6.505044 ACTTCGTAAAGTTTGACCAAGTTT 57.495 33.333 0.00 0.00 43.28 2.66
2089 2808 6.319399 ACTTCGTAAAGTTTGACCAAGTTTG 58.681 36.000 0.00 0.00 43.28 2.93
2090 2809 5.883503 TCGTAAAGTTTGACCAAGTTTGT 57.116 34.783 0.00 0.00 38.32 2.83
2091 2810 6.981762 TCGTAAAGTTTGACCAAGTTTGTA 57.018 33.333 0.00 0.00 38.32 2.41
2092 2811 7.007313 TCGTAAAGTTTGACCAAGTTTGTAG 57.993 36.000 0.00 0.00 38.32 2.74
2093 2812 6.817641 TCGTAAAGTTTGACCAAGTTTGTAGA 59.182 34.615 0.00 0.00 38.32 2.59
2094 2813 7.333921 TCGTAAAGTTTGACCAAGTTTGTAGAA 59.666 33.333 0.00 0.00 38.32 2.10
2095 2814 7.964011 CGTAAAGTTTGACCAAGTTTGTAGAAA 59.036 33.333 0.00 0.00 38.32 2.52
2096 2815 9.628746 GTAAAGTTTGACCAAGTTTGTAGAAAA 57.371 29.630 0.00 0.00 38.32 2.29
2237 2956 6.330278 AAGTTTGTAAAGCTTGACTTTGACC 58.670 36.000 15.19 0.00 45.94 4.02
2238 2957 6.071616 AAGTTTGTAAAGCTTGACTTTGACCA 60.072 34.615 15.19 0.00 45.94 4.02
2239 2958 7.524698 AAGTTTGTAAAGCTTGACTTTGACCAA 60.525 33.333 15.19 0.00 45.94 3.67
2254 2973 7.492614 CTTTGACCAAAGTTAATATGCGAAC 57.507 36.000 12.91 0.00 42.02 3.95
2255 2974 6.811253 TTGACCAAAGTTAATATGCGAACT 57.189 33.333 0.00 0.00 37.50 3.01
2256 2975 7.908827 TTGACCAAAGTTAATATGCGAACTA 57.091 32.000 0.00 0.00 34.81 2.24
2257 2976 7.908827 TGACCAAAGTTAATATGCGAACTAA 57.091 32.000 0.00 0.00 34.81 2.24
2258 2977 8.325421 TGACCAAAGTTAATATGCGAACTAAA 57.675 30.769 0.00 0.00 34.81 1.85
2259 2978 8.952278 TGACCAAAGTTAATATGCGAACTAAAT 58.048 29.630 0.00 0.00 34.81 1.40
2272 2991 7.956420 TGCGAACTAAATAAAAACAGAGAGA 57.044 32.000 0.00 0.00 0.00 3.10
2273 2992 8.018677 TGCGAACTAAATAAAAACAGAGAGAG 57.981 34.615 0.00 0.00 0.00 3.20
2274 2993 6.956520 GCGAACTAAATAAAAACAGAGAGAGC 59.043 38.462 0.00 0.00 0.00 4.09
2275 2994 7.360101 GCGAACTAAATAAAAACAGAGAGAGCA 60.360 37.037 0.00 0.00 0.00 4.26
2276 2995 8.495949 CGAACTAAATAAAAACAGAGAGAGCAA 58.504 33.333 0.00 0.00 0.00 3.91
2338 3057 0.108992 TGGACATGTACGACTTCCGC 60.109 55.000 3.00 0.00 43.32 5.54
2368 3087 2.052690 GCTCTGCCACTCCTACGGA 61.053 63.158 0.00 0.00 0.00 4.69
2400 3119 3.476181 GAAACTTCACCGCATTCGTAAC 58.524 45.455 0.00 0.00 0.00 2.50
2401 3120 2.157834 ACTTCACCGCATTCGTAACA 57.842 45.000 0.00 0.00 0.00 2.41
2404 3123 3.312973 ACTTCACCGCATTCGTAACAAAA 59.687 39.130 0.00 0.00 0.00 2.44
2465 3185 0.905839 CGACGACTAACTAGCGTTGC 59.094 55.000 0.00 0.00 36.64 4.17
2635 3355 3.654173 GACGCCGTACCTGTTCCCC 62.654 68.421 0.00 0.00 0.00 4.81
2790 3510 1.724018 CGTCGTCGAGAACCAGTGTAC 60.724 57.143 0.00 0.00 39.71 2.90
2795 3515 1.334992 CGAGAACCAGTGTACGTGCG 61.335 60.000 0.00 0.00 0.00 5.34
2829 3549 1.073216 GATCCGTCAGCACACGTGAG 61.073 60.000 25.01 16.59 38.14 3.51
2831 3551 3.756677 CGTCAGCACACGTGAGCG 61.757 66.667 28.07 22.61 44.93 5.03
2832 3552 2.354656 GTCAGCACACGTGAGCGA 60.355 61.111 28.07 24.18 42.00 4.93
2833 3553 1.734477 GTCAGCACACGTGAGCGAT 60.734 57.895 28.07 12.54 42.00 4.58
2834 3554 1.006220 TCAGCACACGTGAGCGATT 60.006 52.632 28.07 11.84 42.00 3.34
2835 3555 0.242555 TCAGCACACGTGAGCGATTA 59.757 50.000 28.07 14.47 42.00 1.75
2836 3556 0.642291 CAGCACACGTGAGCGATTAG 59.358 55.000 28.07 15.10 42.00 1.73
2868 3588 4.748892 AGAACCTGACGATGTTGTATCTG 58.251 43.478 0.00 0.00 0.00 2.90
2872 3592 3.119137 CCTGACGATGTTGTATCTGTCCA 60.119 47.826 0.00 0.00 0.00 4.02
3133 3856 8.938883 ACAAGGTATCACATCCTTATCAGTTAT 58.061 33.333 0.00 0.00 41.44 1.89
3195 3971 1.738030 CGCTGAGTGCTGATGATGTCA 60.738 52.381 0.00 0.00 40.11 3.58
3197 3973 2.745821 GCTGAGTGCTGATGATGTCAAA 59.254 45.455 0.00 0.00 36.14 2.69
3207 3983 7.434307 GTGCTGATGATGTCAAATAATTTCTGG 59.566 37.037 0.00 0.00 36.14 3.86
3327 4111 4.988540 GCACTGTAAATATACATGCCTCGA 59.011 41.667 0.00 0.00 41.09 4.04
3340 4124 2.437180 CTCGATGCTTGCCTGCCA 60.437 61.111 0.00 0.00 0.00 4.92
3473 4282 2.992114 AAGACCTCAGACGCCGCT 60.992 61.111 0.00 0.00 0.00 5.52
3532 4341 0.393537 ATGCTGCTAGCCACCTTCAC 60.394 55.000 13.29 0.00 41.51 3.18
3535 4344 0.610174 CTGCTAGCCACCTTCACTGA 59.390 55.000 13.29 0.00 0.00 3.41
3587 4396 5.360714 TGGACTCTGAATCAGCAAAACTTTT 59.639 36.000 5.18 0.00 0.00 2.27
3594 4403 6.208644 TGAATCAGCAAAACTTTTGACTAGC 58.791 36.000 16.90 2.50 0.00 3.42
3675 4516 2.349060 CGCACGCTGCAAGTAAACTTTA 60.349 45.455 0.00 0.00 45.36 1.85
3681 4522 5.524646 ACGCTGCAAGTAAACTTTACTGTTA 59.475 36.000 13.80 4.18 35.30 2.41
3726 4567 2.936498 GCCATTGTATGACGTAGCTTGT 59.064 45.455 0.00 0.00 0.00 3.16
3727 4568 4.116961 GCCATTGTATGACGTAGCTTGTA 58.883 43.478 0.00 0.00 0.00 2.41
3728 4569 4.025979 GCCATTGTATGACGTAGCTTGTAC 60.026 45.833 0.00 0.00 0.00 2.90
3767 4608 8.188139 GTGATGAACTCTTTTGTTTGGAAGTTA 58.812 33.333 0.00 0.00 0.00 2.24
3801 4642 0.605319 CTAAGGGCAACTCCAACGCA 60.605 55.000 0.00 0.00 36.21 5.24
3802 4643 0.037590 TAAGGGCAACTCCAACGCAT 59.962 50.000 0.00 0.00 36.21 4.73
3807 4648 1.949525 GGCAACTCCAACGCATATCAT 59.050 47.619 0.00 0.00 34.01 2.45
3827 4668 0.175531 CAAATCCCCCGCAAATGTCC 59.824 55.000 0.00 0.00 0.00 4.02
3829 4670 2.204865 AATCCCCCGCAAATGTCCGA 62.205 55.000 0.00 0.00 0.00 4.55
3833 4674 2.478746 CCGCAAATGTCCGAACCG 59.521 61.111 0.00 0.00 0.00 4.44
3915 4756 3.366985 GGATGTTCGAAATCCCACAAACC 60.367 47.826 20.08 10.41 38.13 3.27
3925 4766 1.227118 CCACAAACCGGCACCAAAC 60.227 57.895 0.00 0.00 0.00 2.93
3932 4773 3.047877 CGGCACCAAACGAGGGAC 61.048 66.667 0.00 0.00 0.00 4.46
3971 4813 5.282055 TCCTTCCTCATGTGATGTGTATC 57.718 43.478 0.00 0.00 0.00 2.24
3973 4815 4.141642 CCTTCCTCATGTGATGTGTATCCA 60.142 45.833 0.00 0.00 32.09 3.41
3987 4829 4.919774 TGTATCCACACCCTACACAATT 57.080 40.909 0.00 0.00 0.00 2.32
3998 4860 0.250793 TACACAATTCCGACCGCCAT 59.749 50.000 0.00 0.00 0.00 4.40
4000 4862 1.002624 ACAATTCCGACCGCCATGT 60.003 52.632 0.00 0.00 0.00 3.21
4001 4863 0.250793 ACAATTCCGACCGCCATGTA 59.749 50.000 0.00 0.00 0.00 2.29
4020 4882 2.035442 GGCCTTGTCAGACCTTCGC 61.035 63.158 0.00 0.00 0.00 4.70
4043 4905 1.607178 CCATGCAGGTGCTTTCCCA 60.607 57.895 3.18 0.00 42.66 4.37
4053 4915 1.073284 GTGCTTTCCCACCTTGGACTA 59.927 52.381 0.00 0.00 40.96 2.59
4058 4920 0.104882 TCCCACCTTGGACTACACCA 60.105 55.000 0.00 0.00 40.96 4.17
4059 4921 0.991920 CCCACCTTGGACTACACCAT 59.008 55.000 0.00 0.00 40.96 3.55
4071 4935 2.758979 ACTACACCATCGTTCTACTGGG 59.241 50.000 0.00 0.00 34.21 4.45
4074 4938 2.370849 ACACCATCGTTCTACTGGGTTT 59.629 45.455 0.00 0.00 34.21 3.27
4082 4946 3.071479 GTTCTACTGGGTTTCATCGCAA 58.929 45.455 0.00 0.00 0.00 4.85
4085 4949 0.951558 ACTGGGTTTCATCGCAACAC 59.048 50.000 0.00 0.00 0.00 3.32
4087 4951 1.336440 CTGGGTTTCATCGCAACACAA 59.664 47.619 0.00 0.00 37.10 3.33
4128 4992 2.351726 GACGTCATCCATAGCAAACACC 59.648 50.000 11.55 0.00 0.00 4.16
4135 4999 1.677518 CCATAGCAAACACCACGCCTA 60.678 52.381 0.00 0.00 0.00 3.93
4137 5001 0.682852 TAGCAAACACCACGCCTAGT 59.317 50.000 0.00 0.00 0.00 2.57
4143 5007 1.335145 ACACCACGCCTAGTAAGTGT 58.665 50.000 8.14 0.00 41.71 3.55
4176 5040 2.523015 CATTGCCAAGAAATCTGACGC 58.477 47.619 0.00 0.00 0.00 5.19
4178 5042 2.760634 TGCCAAGAAATCTGACGCTA 57.239 45.000 0.00 0.00 0.00 4.26
4179 5043 2.346803 TGCCAAGAAATCTGACGCTAC 58.653 47.619 0.00 0.00 0.00 3.58
4205 5069 5.298197 TGTTTACTTTGAAGCAAACACGA 57.702 34.783 14.98 0.00 43.61 4.35
4233 5099 7.544566 GGATTCGAATGAAGTACTTCTACAACA 59.455 37.037 30.47 14.56 40.14 3.33
4248 5114 3.194005 ACAACAAGTTCATGGAGTCGT 57.806 42.857 0.00 0.00 0.00 4.34
4249 5115 3.541632 ACAACAAGTTCATGGAGTCGTT 58.458 40.909 0.00 0.00 0.00 3.85
4250 5116 3.312421 ACAACAAGTTCATGGAGTCGTTG 59.688 43.478 10.58 10.58 38.68 4.10
4251 5117 3.194005 ACAAGTTCATGGAGTCGTTGT 57.806 42.857 0.00 0.00 0.00 3.32
4252 5118 4.330944 ACAAGTTCATGGAGTCGTTGTA 57.669 40.909 0.00 0.00 0.00 2.41
4253 5119 4.699637 ACAAGTTCATGGAGTCGTTGTAA 58.300 39.130 0.00 0.00 0.00 2.41
4254 5120 4.510340 ACAAGTTCATGGAGTCGTTGTAAC 59.490 41.667 0.00 0.00 0.00 2.50
4255 5121 4.330944 AGTTCATGGAGTCGTTGTAACA 57.669 40.909 0.00 0.00 0.00 2.41
4256 5122 4.056050 AGTTCATGGAGTCGTTGTAACAC 58.944 43.478 0.00 0.00 0.00 3.32
4257 5123 3.034721 TCATGGAGTCGTTGTAACACC 57.965 47.619 0.00 0.00 0.00 4.16
4258 5124 2.073816 CATGGAGTCGTTGTAACACCC 58.926 52.381 0.00 0.00 0.00 4.61
4259 5125 1.121378 TGGAGTCGTTGTAACACCCA 58.879 50.000 0.00 0.00 0.00 4.51
4260 5126 1.202557 TGGAGTCGTTGTAACACCCAC 60.203 52.381 0.00 0.00 0.00 4.61
4261 5127 1.202557 GGAGTCGTTGTAACACCCACA 60.203 52.381 0.00 0.00 0.00 4.17
4262 5128 2.553086 GAGTCGTTGTAACACCCACAA 58.447 47.619 0.00 0.00 33.61 3.33
4263 5129 3.135994 GAGTCGTTGTAACACCCACAAT 58.864 45.455 0.00 0.00 38.13 2.71
4264 5130 2.875933 AGTCGTTGTAACACCCACAATG 59.124 45.455 1.84 1.84 41.97 2.82
4265 5131 2.614983 GTCGTTGTAACACCCACAATGT 59.385 45.455 7.16 0.00 41.55 2.71
4266 5132 2.614520 TCGTTGTAACACCCACAATGTG 59.385 45.455 6.37 6.37 41.55 3.21
4279 5145 4.356405 CACAATGTGGCTATATCTCCCA 57.644 45.455 5.29 0.00 0.00 4.37
4283 5149 2.440539 GTGGCTATATCTCCCACGTG 57.559 55.000 9.08 9.08 39.56 4.49
4284 5150 1.687123 GTGGCTATATCTCCCACGTGT 59.313 52.381 15.65 0.00 39.56 4.49
4285 5151 1.961394 TGGCTATATCTCCCACGTGTC 59.039 52.381 15.65 0.00 0.00 3.67
4286 5152 1.068472 GGCTATATCTCCCACGTGTCG 60.068 57.143 15.65 4.04 0.00 4.35
4287 5153 1.068472 GCTATATCTCCCACGTGTCGG 60.068 57.143 15.65 9.74 0.00 4.79
4288 5154 1.540267 CTATATCTCCCACGTGTCGGG 59.460 57.143 15.65 9.12 46.03 5.14
4304 5170 4.329545 GGGCACGACTTGGAGGCA 62.330 66.667 0.00 0.00 0.00 4.75
4305 5171 2.045926 GGCACGACTTGGAGGCAT 60.046 61.111 0.00 0.00 0.00 4.40
4306 5172 1.220749 GGCACGACTTGGAGGCATA 59.779 57.895 0.00 0.00 0.00 3.14
4307 5173 0.811616 GGCACGACTTGGAGGCATAG 60.812 60.000 0.00 0.00 0.00 2.23
4308 5174 1.432270 GCACGACTTGGAGGCATAGC 61.432 60.000 0.00 0.00 0.00 2.97
4319 5185 2.772739 GGCATAGCCGCATGATAGG 58.227 57.895 0.00 0.00 39.62 2.57
4320 5186 0.036010 GGCATAGCCGCATGATAGGT 60.036 55.000 0.00 0.00 39.62 3.08
4321 5187 1.611673 GGCATAGCCGCATGATAGGTT 60.612 52.381 0.00 0.00 39.62 3.50
4322 5188 2.154462 GCATAGCCGCATGATAGGTTT 58.846 47.619 0.00 0.00 0.00 3.27
4323 5189 3.334691 GCATAGCCGCATGATAGGTTTA 58.665 45.455 0.00 0.00 0.00 2.01
4324 5190 3.941483 GCATAGCCGCATGATAGGTTTAT 59.059 43.478 0.00 0.00 0.00 1.40
4325 5191 4.034510 GCATAGCCGCATGATAGGTTTATC 59.965 45.833 0.00 0.00 36.92 1.75
4326 5192 2.688507 AGCCGCATGATAGGTTTATCG 58.311 47.619 0.00 0.00 38.83 2.92
4327 5193 1.128692 GCCGCATGATAGGTTTATCGC 59.871 52.381 0.00 0.00 38.83 4.58
4328 5194 2.412870 CCGCATGATAGGTTTATCGCA 58.587 47.619 0.00 0.00 38.83 5.10
4329 5195 2.805671 CCGCATGATAGGTTTATCGCAA 59.194 45.455 0.00 0.00 38.83 4.85
4330 5196 3.120546 CCGCATGATAGGTTTATCGCAAG 60.121 47.826 0.00 0.00 38.83 4.01
4343 5209 2.981859 TCGCAAGAGGGGTAATCTTC 57.018 50.000 0.00 0.00 45.01 2.87
4344 5210 2.184533 TCGCAAGAGGGGTAATCTTCA 58.815 47.619 0.00 0.00 45.01 3.02
4345 5211 2.093658 TCGCAAGAGGGGTAATCTTCAC 60.094 50.000 0.00 0.00 45.01 3.18
4346 5212 2.354704 CGCAAGAGGGGTAATCTTCACA 60.355 50.000 0.00 0.00 34.80 3.58
4347 5213 3.010420 GCAAGAGGGGTAATCTTCACAC 58.990 50.000 0.00 0.00 34.80 3.82
4348 5214 3.559171 GCAAGAGGGGTAATCTTCACACA 60.559 47.826 0.00 0.00 34.80 3.72
4349 5215 4.848357 CAAGAGGGGTAATCTTCACACAT 58.152 43.478 0.00 0.00 34.80 3.21
4350 5216 4.762289 AGAGGGGTAATCTTCACACATC 57.238 45.455 0.00 0.00 30.35 3.06
4351 5217 3.456277 AGAGGGGTAATCTTCACACATCC 59.544 47.826 0.00 0.00 30.50 3.51
4352 5218 2.509964 AGGGGTAATCTTCACACATCCC 59.490 50.000 0.00 0.00 0.00 3.85
4353 5219 2.241176 GGGGTAATCTTCACACATCCCA 59.759 50.000 0.00 0.00 35.77 4.37
4354 5220 3.117512 GGGGTAATCTTCACACATCCCAT 60.118 47.826 0.00 0.00 35.77 4.00
4355 5221 3.885297 GGGTAATCTTCACACATCCCATG 59.115 47.826 0.00 0.00 34.39 3.66
4356 5222 4.526970 GGTAATCTTCACACATCCCATGT 58.473 43.478 0.00 0.00 46.22 3.21
4357 5223 5.397447 GGGTAATCTTCACACATCCCATGTA 60.397 44.000 0.00 0.00 42.70 2.29
4358 5224 5.527582 GGTAATCTTCACACATCCCATGTAC 59.472 44.000 0.00 0.00 42.70 2.90
4359 5225 5.441718 AATCTTCACACATCCCATGTACT 57.558 39.130 0.00 0.00 42.70 2.73
4360 5226 4.206477 TCTTCACACATCCCATGTACTG 57.794 45.455 0.00 0.00 42.70 2.74
4361 5227 3.837731 TCTTCACACATCCCATGTACTGA 59.162 43.478 0.00 0.00 42.70 3.41
4362 5228 4.285775 TCTTCACACATCCCATGTACTGAA 59.714 41.667 0.00 7.93 42.70 3.02
4363 5229 4.842531 TCACACATCCCATGTACTGAAT 57.157 40.909 0.00 0.00 42.70 2.57
4364 5230 5.948742 TCACACATCCCATGTACTGAATA 57.051 39.130 0.00 0.00 42.70 1.75
4365 5231 6.306643 TCACACATCCCATGTACTGAATAA 57.693 37.500 0.00 0.00 42.70 1.40
4366 5232 6.348498 TCACACATCCCATGTACTGAATAAG 58.652 40.000 0.00 0.00 42.70 1.73
4367 5233 6.156083 TCACACATCCCATGTACTGAATAAGA 59.844 38.462 0.00 0.00 42.70 2.10
4368 5234 6.823182 CACACATCCCATGTACTGAATAAGAA 59.177 38.462 0.00 0.00 42.70 2.52
4369 5235 7.336679 CACACATCCCATGTACTGAATAAGAAA 59.663 37.037 0.00 0.00 42.70 2.52
4370 5236 7.554118 ACACATCCCATGTACTGAATAAGAAAG 59.446 37.037 0.00 0.00 42.70 2.62
4371 5237 7.012704 CACATCCCATGTACTGAATAAGAAAGG 59.987 40.741 0.00 0.00 42.70 3.11
4372 5238 6.001449 TCCCATGTACTGAATAAGAAAGGG 57.999 41.667 0.00 0.00 0.00 3.95
4373 5239 5.729229 TCCCATGTACTGAATAAGAAAGGGA 59.271 40.000 0.00 0.00 38.05 4.20
4374 5240 6.389869 TCCCATGTACTGAATAAGAAAGGGAT 59.610 38.462 0.00 0.00 35.62 3.85
4375 5241 7.570982 TCCCATGTACTGAATAAGAAAGGGATA 59.429 37.037 0.00 0.00 35.62 2.59
4376 5242 8.217799 CCCATGTACTGAATAAGAAAGGGATAA 58.782 37.037 0.00 0.00 33.23 1.75
4377 5243 9.627123 CCATGTACTGAATAAGAAAGGGATAAA 57.373 33.333 0.00 0.00 0.00 1.40
4383 5249 9.454859 ACTGAATAAGAAAGGGATAAAGAGTTG 57.545 33.333 0.00 0.00 0.00 3.16
4384 5250 8.807948 TGAATAAGAAAGGGATAAAGAGTTGG 57.192 34.615 0.00 0.00 0.00 3.77
4385 5251 7.339466 TGAATAAGAAAGGGATAAAGAGTTGGC 59.661 37.037 0.00 0.00 0.00 4.52
4386 5252 4.936685 AGAAAGGGATAAAGAGTTGGCT 57.063 40.909 0.00 0.00 0.00 4.75
4387 5253 5.262455 AGAAAGGGATAAAGAGTTGGCTT 57.738 39.130 0.00 0.00 0.00 4.35
4388 5254 6.388619 AGAAAGGGATAAAGAGTTGGCTTA 57.611 37.500 0.00 0.00 0.00 3.09
4389 5255 6.181190 AGAAAGGGATAAAGAGTTGGCTTAC 58.819 40.000 0.00 0.00 0.00 2.34
4390 5256 5.514500 AAGGGATAAAGAGTTGGCTTACA 57.486 39.130 0.00 0.00 0.00 2.41
4391 5257 5.514500 AGGGATAAAGAGTTGGCTTACAA 57.486 39.130 0.00 0.00 36.54 2.41
4392 5258 6.079712 AGGGATAAAGAGTTGGCTTACAAT 57.920 37.500 0.00 0.00 41.95 2.71
4393 5259 6.122964 AGGGATAAAGAGTTGGCTTACAATC 58.877 40.000 0.00 0.00 41.95 2.67
4394 5260 5.007724 GGGATAAAGAGTTGGCTTACAATCG 59.992 44.000 0.00 0.00 41.95 3.34
4395 5261 3.831715 AAAGAGTTGGCTTACAATCGC 57.168 42.857 0.00 0.00 41.95 4.58
4396 5262 1.739067 AGAGTTGGCTTACAATCGCC 58.261 50.000 0.00 0.00 46.46 5.54
4402 5268 1.448985 GGCTTACAATCGCCACTTCA 58.551 50.000 0.00 0.00 45.59 3.02
4403 5269 1.130561 GGCTTACAATCGCCACTTCAC 59.869 52.381 0.00 0.00 45.59 3.18
4404 5270 1.804151 GCTTACAATCGCCACTTCACA 59.196 47.619 0.00 0.00 0.00 3.58
4405 5271 2.412847 GCTTACAATCGCCACTTCACAC 60.413 50.000 0.00 0.00 0.00 3.82
4406 5272 2.535012 TACAATCGCCACTTCACACA 57.465 45.000 0.00 0.00 0.00 3.72
4407 5273 1.674359 ACAATCGCCACTTCACACAA 58.326 45.000 0.00 0.00 0.00 3.33
4408 5274 2.020720 ACAATCGCCACTTCACACAAA 58.979 42.857 0.00 0.00 0.00 2.83
4409 5275 2.622942 ACAATCGCCACTTCACACAAAT 59.377 40.909 0.00 0.00 0.00 2.32
4410 5276 3.818210 ACAATCGCCACTTCACACAAATA 59.182 39.130 0.00 0.00 0.00 1.40
4411 5277 4.158384 CAATCGCCACTTCACACAAATAC 58.842 43.478 0.00 0.00 0.00 1.89
4412 5278 2.839975 TCGCCACTTCACACAAATACA 58.160 42.857 0.00 0.00 0.00 2.29
4413 5279 3.206964 TCGCCACTTCACACAAATACAA 58.793 40.909 0.00 0.00 0.00 2.41
4414 5280 3.249799 TCGCCACTTCACACAAATACAAG 59.750 43.478 0.00 0.00 0.00 3.16
4415 5281 3.003275 CGCCACTTCACACAAATACAAGT 59.997 43.478 0.00 0.00 0.00 3.16
4416 5282 4.497340 CGCCACTTCACACAAATACAAGTT 60.497 41.667 0.00 0.00 0.00 2.66
4417 5283 5.277586 CGCCACTTCACACAAATACAAGTTA 60.278 40.000 0.00 0.00 0.00 2.24
4418 5284 6.500041 GCCACTTCACACAAATACAAGTTAA 58.500 36.000 0.00 0.00 0.00 2.01
4419 5285 6.975772 GCCACTTCACACAAATACAAGTTAAA 59.024 34.615 0.00 0.00 0.00 1.52
4420 5286 7.043656 GCCACTTCACACAAATACAAGTTAAAC 60.044 37.037 0.00 0.00 0.00 2.01
4421 5287 7.971168 CCACTTCACACAAATACAAGTTAAACA 59.029 33.333 0.00 0.00 0.00 2.83
4422 5288 9.515020 CACTTCACACAAATACAAGTTAAACAT 57.485 29.630 0.00 0.00 0.00 2.71
4436 5302 9.077885 ACAAGTTAAACATACATCATCCAAAGT 57.922 29.630 0.00 0.00 0.00 2.66
4439 5305 9.733556 AGTTAAACATACATCATCCAAAGTACA 57.266 29.630 0.00 0.00 0.00 2.90
4443 5309 8.806429 AACATACATCATCCAAAGTACAATCA 57.194 30.769 0.00 0.00 0.00 2.57
4444 5310 8.806429 ACATACATCATCCAAAGTACAATCAA 57.194 30.769 0.00 0.00 0.00 2.57
4445 5311 8.896744 ACATACATCATCCAAAGTACAATCAAG 58.103 33.333 0.00 0.00 0.00 3.02
4446 5312 6.764308 ACATCATCCAAAGTACAATCAAGG 57.236 37.500 0.00 0.00 0.00 3.61
4447 5313 6.248433 ACATCATCCAAAGTACAATCAAGGT 58.752 36.000 0.00 0.00 0.00 3.50
4448 5314 6.375455 ACATCATCCAAAGTACAATCAAGGTC 59.625 38.462 0.00 0.00 0.00 3.85
4449 5315 5.253330 TCATCCAAAGTACAATCAAGGTCC 58.747 41.667 0.00 0.00 0.00 4.46
4450 5316 3.670625 TCCAAAGTACAATCAAGGTCCG 58.329 45.455 0.00 0.00 0.00 4.79
4451 5317 3.325425 TCCAAAGTACAATCAAGGTCCGA 59.675 43.478 0.00 0.00 0.00 4.55
4452 5318 3.435671 CCAAAGTACAATCAAGGTCCGAC 59.564 47.826 0.00 0.00 0.00 4.79
4453 5319 4.315803 CAAAGTACAATCAAGGTCCGACT 58.684 43.478 0.00 0.00 0.00 4.18
4454 5320 5.475719 CAAAGTACAATCAAGGTCCGACTA 58.524 41.667 0.00 0.00 0.00 2.59
4455 5321 4.715527 AGTACAATCAAGGTCCGACTAC 57.284 45.455 0.00 0.00 0.00 2.73
4456 5322 2.649331 ACAATCAAGGTCCGACTACG 57.351 50.000 0.00 0.00 39.43 3.51
4472 5338 5.624292 CGACTACGGAACCAAAAATAAAGG 58.376 41.667 0.00 0.00 35.72 3.11
4473 5339 5.409214 CGACTACGGAACCAAAAATAAAGGA 59.591 40.000 0.00 0.00 35.72 3.36
4474 5340 6.073112 CGACTACGGAACCAAAAATAAAGGAA 60.073 38.462 0.00 0.00 35.72 3.36
4475 5341 7.210718 ACTACGGAACCAAAAATAAAGGAAG 57.789 36.000 0.00 0.00 0.00 3.46
4476 5342 6.999871 ACTACGGAACCAAAAATAAAGGAAGA 59.000 34.615 0.00 0.00 0.00 2.87
4477 5343 6.080648 ACGGAACCAAAAATAAAGGAAGAC 57.919 37.500 0.00 0.00 0.00 3.01
4478 5344 5.595133 ACGGAACCAAAAATAAAGGAAGACA 59.405 36.000 0.00 0.00 0.00 3.41
4479 5345 6.097129 ACGGAACCAAAAATAAAGGAAGACAA 59.903 34.615 0.00 0.00 0.00 3.18
4480 5346 6.419710 CGGAACCAAAAATAAAGGAAGACAAC 59.580 38.462 0.00 0.00 0.00 3.32
4481 5347 6.704493 GGAACCAAAAATAAAGGAAGACAACC 59.296 38.462 0.00 0.00 0.00 3.77
4482 5348 6.169557 ACCAAAAATAAAGGAAGACAACCC 57.830 37.500 0.00 0.00 0.00 4.11
4483 5349 5.071250 ACCAAAAATAAAGGAAGACAACCCC 59.929 40.000 0.00 0.00 0.00 4.95
4484 5350 5.071115 CCAAAAATAAAGGAAGACAACCCCA 59.929 40.000 0.00 0.00 0.00 4.96
4485 5351 6.408662 CCAAAAATAAAGGAAGACAACCCCAA 60.409 38.462 0.00 0.00 0.00 4.12
4486 5352 6.816616 AAAATAAAGGAAGACAACCCCAAA 57.183 33.333 0.00 0.00 0.00 3.28
4487 5353 7.387265 AAAATAAAGGAAGACAACCCCAAAT 57.613 32.000 0.00 0.00 0.00 2.32
4488 5354 6.358974 AATAAAGGAAGACAACCCCAAATG 57.641 37.500 0.00 0.00 0.00 2.32
4489 5355 1.632589 AGGAAGACAACCCCAAATGC 58.367 50.000 0.00 0.00 0.00 3.56
4490 5356 1.147817 AGGAAGACAACCCCAAATGCT 59.852 47.619 0.00 0.00 0.00 3.79
4491 5357 2.378547 AGGAAGACAACCCCAAATGCTA 59.621 45.455 0.00 0.00 0.00 3.49
4492 5358 2.755103 GGAAGACAACCCCAAATGCTAG 59.245 50.000 0.00 0.00 0.00 3.42
4493 5359 3.561313 GGAAGACAACCCCAAATGCTAGA 60.561 47.826 0.00 0.00 0.00 2.43
4494 5360 4.273318 GAAGACAACCCCAAATGCTAGAT 58.727 43.478 0.00 0.00 0.00 1.98
4495 5361 3.891049 AGACAACCCCAAATGCTAGATC 58.109 45.455 0.00 0.00 0.00 2.75
4496 5362 2.952310 GACAACCCCAAATGCTAGATCC 59.048 50.000 0.00 0.00 0.00 3.36
4497 5363 2.310538 CAACCCCAAATGCTAGATCCC 58.689 52.381 0.00 0.00 0.00 3.85
4498 5364 1.912862 ACCCCAAATGCTAGATCCCT 58.087 50.000 0.00 0.00 0.00 4.20
4499 5365 3.074857 ACCCCAAATGCTAGATCCCTA 57.925 47.619 0.00 0.00 0.00 3.53
4500 5366 3.403322 ACCCCAAATGCTAGATCCCTAA 58.597 45.455 0.00 0.00 0.00 2.69
4501 5367 3.990245 ACCCCAAATGCTAGATCCCTAAT 59.010 43.478 0.00 0.00 0.00 1.73
4502 5368 4.420214 ACCCCAAATGCTAGATCCCTAATT 59.580 41.667 0.00 0.00 0.00 1.40
4503 5369 5.615261 ACCCCAAATGCTAGATCCCTAATTA 59.385 40.000 0.00 0.00 0.00 1.40
4504 5370 6.278000 ACCCCAAATGCTAGATCCCTAATTAT 59.722 38.462 0.00 0.00 0.00 1.28
4505 5371 6.830838 CCCCAAATGCTAGATCCCTAATTATC 59.169 42.308 0.00 0.00 0.00 1.75
4506 5372 6.830838 CCCAAATGCTAGATCCCTAATTATCC 59.169 42.308 0.00 0.00 0.00 2.59
4507 5373 7.312183 CCCAAATGCTAGATCCCTAATTATCCT 60.312 40.741 0.00 0.00 0.00 3.24
4508 5374 8.772250 CCAAATGCTAGATCCCTAATTATCCTA 58.228 37.037 0.00 0.00 0.00 2.94
4513 5379 8.772250 TGCTAGATCCCTAATTATCCTAATTGG 58.228 37.037 0.00 0.50 37.10 3.16
4514 5380 8.214364 GCTAGATCCCTAATTATCCTAATTGGG 58.786 40.741 12.57 12.57 37.82 4.12
4515 5381 6.974795 AGATCCCTAATTATCCTAATTGGGC 58.025 40.000 13.59 4.29 37.06 5.36
4516 5382 6.742404 AGATCCCTAATTATCCTAATTGGGCT 59.258 38.462 13.59 0.00 37.06 5.19
4517 5383 6.388619 TCCCTAATTATCCTAATTGGGCTC 57.611 41.667 13.59 0.00 37.06 4.70
4518 5384 5.253096 TCCCTAATTATCCTAATTGGGCTCC 59.747 44.000 13.59 0.00 37.06 4.70
4519 5385 5.015178 CCCTAATTATCCTAATTGGGCTCCA 59.985 44.000 13.59 0.00 37.06 3.86
4520 5386 5.946377 CCTAATTATCCTAATTGGGCTCCAC 59.054 44.000 2.26 0.00 32.72 4.02
4521 5387 5.669798 AATTATCCTAATTGGGCTCCACT 57.330 39.130 2.26 0.00 36.20 4.00
4522 5388 6.780198 AATTATCCTAATTGGGCTCCACTA 57.220 37.500 2.26 0.00 36.20 2.74
4523 5389 5.562298 TTATCCTAATTGGGCTCCACTAC 57.438 43.478 2.26 0.00 36.20 2.73
4524 5390 3.130734 TCCTAATTGGGCTCCACTACT 57.869 47.619 2.26 0.00 36.20 2.57
4525 5391 2.771943 TCCTAATTGGGCTCCACTACTG 59.228 50.000 2.26 0.00 36.20 2.74
4526 5392 2.771943 CCTAATTGGGCTCCACTACTGA 59.228 50.000 0.00 0.00 30.78 3.41
4527 5393 3.392616 CCTAATTGGGCTCCACTACTGAT 59.607 47.826 0.00 0.00 30.78 2.90
4528 5394 3.567478 AATTGGGCTCCACTACTGATC 57.433 47.619 0.00 0.00 30.78 2.92
4529 5395 1.951209 TTGGGCTCCACTACTGATCA 58.049 50.000 0.00 0.00 30.78 2.92
4530 5396 1.951209 TGGGCTCCACTACTGATCAA 58.049 50.000 0.00 0.00 0.00 2.57
4531 5397 2.481441 TGGGCTCCACTACTGATCAAT 58.519 47.619 0.00 0.00 0.00 2.57
4532 5398 3.653164 TGGGCTCCACTACTGATCAATA 58.347 45.455 0.00 0.00 0.00 1.90
4533 5399 3.643320 TGGGCTCCACTACTGATCAATAG 59.357 47.826 9.60 9.60 0.00 1.73
4534 5400 3.007398 GGGCTCCACTACTGATCAATAGG 59.993 52.174 15.20 4.77 0.00 2.57
4535 5401 3.898123 GGCTCCACTACTGATCAATAGGA 59.102 47.826 15.20 4.35 0.00 2.94
4536 5402 4.345257 GGCTCCACTACTGATCAATAGGAA 59.655 45.833 15.20 0.20 0.00 3.36
4537 5403 5.163301 GGCTCCACTACTGATCAATAGGAAA 60.163 44.000 15.20 0.00 0.00 3.13
4538 5404 5.755861 GCTCCACTACTGATCAATAGGAAAC 59.244 44.000 15.20 0.00 0.00 2.78
4539 5405 5.902681 TCCACTACTGATCAATAGGAAACG 58.097 41.667 15.20 0.00 0.00 3.60
4540 5406 5.655090 TCCACTACTGATCAATAGGAAACGA 59.345 40.000 15.20 1.13 0.00 3.85
4541 5407 6.153851 TCCACTACTGATCAATAGGAAACGAA 59.846 38.462 15.20 0.00 0.00 3.85
4542 5408 6.816640 CCACTACTGATCAATAGGAAACGAAA 59.183 38.462 15.20 0.00 0.00 3.46
4543 5409 7.201530 CCACTACTGATCAATAGGAAACGAAAC 60.202 40.741 15.20 0.00 0.00 2.78
4544 5410 7.330946 CACTACTGATCAATAGGAAACGAAACA 59.669 37.037 15.20 0.00 0.00 2.83
4545 5411 7.876068 ACTACTGATCAATAGGAAACGAAACAA 59.124 33.333 15.20 0.00 0.00 2.83
4546 5412 7.504924 ACTGATCAATAGGAAACGAAACAAA 57.495 32.000 0.00 0.00 0.00 2.83
4547 5413 7.936584 ACTGATCAATAGGAAACGAAACAAAA 58.063 30.769 0.00 0.00 0.00 2.44
4548 5414 7.860872 ACTGATCAATAGGAAACGAAACAAAAC 59.139 33.333 0.00 0.00 0.00 2.43
4549 5415 7.708051 TGATCAATAGGAAACGAAACAAAACA 58.292 30.769 0.00 0.00 0.00 2.83
4550 5416 8.191446 TGATCAATAGGAAACGAAACAAAACAA 58.809 29.630 0.00 0.00 0.00 2.83
4551 5417 9.191995 GATCAATAGGAAACGAAACAAAACAAT 57.808 29.630 0.00 0.00 0.00 2.71
4552 5418 8.346476 TCAATAGGAAACGAAACAAAACAATG 57.654 30.769 0.00 0.00 0.00 2.82
4553 5419 8.191446 TCAATAGGAAACGAAACAAAACAATGA 58.809 29.630 0.00 0.00 0.00 2.57
4554 5420 8.977505 CAATAGGAAACGAAACAAAACAATGAT 58.022 29.630 0.00 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
386 409 7.709613 GGTCAACATAATTTATGACGACTACCT 59.290 37.037 24.94 4.70 42.35 3.08
389 412 7.221259 CACGGTCAACATAATTTATGACGACTA 59.779 37.037 24.94 7.87 42.35 2.59
390 413 6.035650 CACGGTCAACATAATTTATGACGACT 59.964 38.462 24.94 14.32 42.35 4.18
498 526 0.671251 TCGGTTCAAAATTGCGCCTT 59.329 45.000 4.18 0.00 0.00 4.35
574 602 1.586154 CGCGGACAAAAATGGAGGCT 61.586 55.000 0.00 0.00 0.00 4.58
578 606 2.958576 GGCGCGGACAAAAATGGA 59.041 55.556 8.83 0.00 0.00 3.41
604 632 3.251729 CCCATTTCATCCGTCAGCATAAG 59.748 47.826 0.00 0.00 0.00 1.73
605 633 3.213506 CCCATTTCATCCGTCAGCATAA 58.786 45.455 0.00 0.00 0.00 1.90
606 634 2.172505 ACCCATTTCATCCGTCAGCATA 59.827 45.455 0.00 0.00 0.00 3.14
618 647 0.037590 CAACTCCCCGACCCATTTCA 59.962 55.000 0.00 0.00 0.00 2.69
631 660 0.035343 GGGGGTGTTAGAGCAACTCC 60.035 60.000 0.66 0.66 45.97 3.85
632 661 0.984995 AGGGGGTGTTAGAGCAACTC 59.015 55.000 0.00 0.00 38.05 3.01
633 662 2.337359 TAGGGGGTGTTAGAGCAACT 57.663 50.000 0.00 0.00 38.05 3.16
634 663 2.483188 CGATAGGGGGTGTTAGAGCAAC 60.483 54.545 0.00 0.00 37.67 4.17
635 664 1.760613 CGATAGGGGGTGTTAGAGCAA 59.239 52.381 0.00 0.00 0.00 3.91
662 692 4.846137 GTGCAATGTCAAATAGTCGTTGTC 59.154 41.667 0.00 0.00 35.55 3.18
665 695 4.072131 AGGTGCAATGTCAAATAGTCGTT 58.928 39.130 0.00 0.00 0.00 3.85
666 696 3.436704 CAGGTGCAATGTCAAATAGTCGT 59.563 43.478 0.00 0.00 0.00 4.34
672 702 2.297033 GTGGTCAGGTGCAATGTCAAAT 59.703 45.455 0.00 0.00 0.00 2.32
712 1342 0.895530 ACAGAGTGATGGTACGGGTG 59.104 55.000 0.00 0.00 0.00 4.61
764 1394 1.876263 GCTGCGGCGTTTGTTTGTT 60.876 52.632 9.37 0.00 0.00 2.83
765 1395 2.278531 GCTGCGGCGTTTGTTTGT 60.279 55.556 9.37 0.00 0.00 2.83
766 1396 3.029735 GGCTGCGGCGTTTGTTTG 61.030 61.111 12.29 0.00 39.81 2.93
767 1397 3.483235 CTGGCTGCGGCGTTTGTTT 62.483 57.895 12.29 0.00 39.81 2.83
783 1413 1.153765 TCGCTCATCTTGGTCGCTG 60.154 57.895 0.00 0.00 0.00 5.18
796 1426 1.154654 CTGTTTTTCCGCGTCGCTC 60.155 57.895 16.36 0.00 0.00 5.03
1083 1718 4.125695 GGCGAGCGTACCTTCCGT 62.126 66.667 0.00 0.00 0.00 4.69
1365 2000 0.179094 AAGGAGTTGTGCGTCGTCAA 60.179 50.000 0.00 0.00 0.00 3.18
1373 2008 4.430423 CGCGCGAAGGAGTTGTGC 62.430 66.667 28.94 0.00 35.85 4.57
1469 2104 3.399181 GGCGGGGATGGACTCACA 61.399 66.667 0.00 0.00 0.00 3.58
1498 2133 3.429080 GAGAGCAGAGCCAGAGCGG 62.429 68.421 0.00 0.00 46.67 5.52
1499 2134 2.104729 GAGAGCAGAGCCAGAGCG 59.895 66.667 0.00 0.00 46.67 5.03
1500 2135 1.039233 AGAGAGAGCAGAGCCAGAGC 61.039 60.000 0.00 0.00 40.32 4.09
1501 2136 1.406539 GAAGAGAGAGCAGAGCCAGAG 59.593 57.143 0.00 0.00 0.00 3.35
1502 2137 1.473258 GAAGAGAGAGCAGAGCCAGA 58.527 55.000 0.00 0.00 0.00 3.86
1503 2138 0.461135 GGAAGAGAGAGCAGAGCCAG 59.539 60.000 0.00 0.00 0.00 4.85
1504 2139 1.318886 CGGAAGAGAGAGCAGAGCCA 61.319 60.000 0.00 0.00 0.00 4.75
1505 2140 1.319614 ACGGAAGAGAGAGCAGAGCC 61.320 60.000 0.00 0.00 0.00 4.70
1506 2141 0.100503 GACGGAAGAGAGAGCAGAGC 59.899 60.000 0.00 0.00 0.00 4.09
1507 2142 1.750193 AGACGGAAGAGAGAGCAGAG 58.250 55.000 0.00 0.00 0.00 3.35
1508 2143 2.634600 GTAGACGGAAGAGAGAGCAGA 58.365 52.381 0.00 0.00 0.00 4.26
1509 2144 1.673920 GGTAGACGGAAGAGAGAGCAG 59.326 57.143 0.00 0.00 0.00 4.24
1525 2160 0.904865 TCCCACAGGTCAGCAGGTAG 60.905 60.000 0.00 0.00 0.00 3.18
1556 2191 4.264217 TGACAGGGTCTAACATGGACTCTA 60.264 45.833 3.03 0.00 41.97 2.43
1557 2192 3.100671 GACAGGGTCTAACATGGACTCT 58.899 50.000 0.00 0.00 44.38 3.24
1587 2276 4.699522 GACACCTCACCCCACCGC 62.700 72.222 0.00 0.00 0.00 5.68
1588 2277 4.016706 GGACACCTCACCCCACCG 62.017 72.222 0.00 0.00 0.00 4.94
1630 2319 1.372997 CTTGGACACGTGGACGAGG 60.373 63.158 21.57 7.54 43.02 4.63
1750 2448 1.003839 ATGTGTGCGGTGTGGGTAG 60.004 57.895 0.00 0.00 0.00 3.18
1757 2455 4.409218 GCTGCCATGTGTGCGGTG 62.409 66.667 3.63 0.00 37.43 4.94
1801 2510 1.135083 CGTCTCACCCACACTGGATAC 60.135 57.143 0.00 0.00 40.96 2.24
1803 2512 0.832135 ACGTCTCACCCACACTGGAT 60.832 55.000 0.00 0.00 40.96 3.41
1805 2514 1.300931 CACGTCTCACCCACACTGG 60.301 63.158 0.00 0.00 37.25 4.00
1806 2515 0.875908 CACACGTCTCACCCACACTG 60.876 60.000 0.00 0.00 0.00 3.66
1807 2516 1.441729 CACACGTCTCACCCACACT 59.558 57.895 0.00 0.00 0.00 3.55
1814 2530 1.215655 GCAGACACCACACGTCTCAC 61.216 60.000 0.00 0.00 41.80 3.51
1844 2560 2.738643 CGACCAGAAATGGACGTGCTAT 60.739 50.000 8.99 0.00 40.97 2.97
1858 2574 0.532573 GAGGACTGAATGCGACCAGA 59.467 55.000 6.12 0.00 34.65 3.86
1871 2587 2.993899 CGTGTTTATTTCAGCGAGGACT 59.006 45.455 0.00 0.00 0.00 3.85
1872 2588 2.991190 TCGTGTTTATTTCAGCGAGGAC 59.009 45.455 0.00 0.00 0.00 3.85
1938 2657 5.227805 CGAGAATGGCATCAATTTTACGTTG 59.772 40.000 0.00 0.00 0.00 4.10
1941 2660 5.155509 TCGAGAATGGCATCAATTTTACG 57.844 39.130 0.00 0.00 0.00 3.18
1962 2681 0.542333 GGGACCTAACCCTTGAGCTC 59.458 60.000 6.82 6.82 45.90 4.09
1987 2706 7.668525 ACAGAGTAAATAAAAACGAAGGGAG 57.331 36.000 0.00 0.00 0.00 4.30
2016 2735 9.719355 TGCAGAGTAAATAAACAGTCAAATCTA 57.281 29.630 0.00 0.00 0.00 1.98
2017 2736 8.621532 TGCAGAGTAAATAAACAGTCAAATCT 57.378 30.769 0.00 0.00 0.00 2.40
2036 2755 8.659925 ATTTCAGTCAACTCTAATATGCAGAG 57.340 34.615 11.37 11.37 44.28 3.35
2037 2756 8.260114 TGATTTCAGTCAACTCTAATATGCAGA 58.740 33.333 0.00 0.00 0.00 4.26
2038 2757 8.429493 TGATTTCAGTCAACTCTAATATGCAG 57.571 34.615 0.00 0.00 0.00 4.41
2039 2758 8.791327 TTGATTTCAGTCAACTCTAATATGCA 57.209 30.769 0.00 0.00 33.41 3.96
2040 2759 9.495754 GTTTGATTTCAGTCAACTCTAATATGC 57.504 33.333 0.00 0.00 37.80 3.14
2044 2763 8.499162 CGAAGTTTGATTTCAGTCAACTCTAAT 58.501 33.333 0.00 0.00 37.80 1.73
2045 2764 7.494625 ACGAAGTTTGATTTCAGTCAACTCTAA 59.505 33.333 0.00 0.00 37.78 2.10
2046 2765 6.984474 ACGAAGTTTGATTTCAGTCAACTCTA 59.016 34.615 0.00 0.00 37.78 2.43
2047 2766 5.817816 ACGAAGTTTGATTTCAGTCAACTCT 59.182 36.000 0.00 0.00 37.78 3.24
2048 2767 6.049263 ACGAAGTTTGATTTCAGTCAACTC 57.951 37.500 0.00 0.00 37.78 3.01
2049 2768 7.548196 TTACGAAGTTTGATTTCAGTCAACT 57.452 32.000 0.00 0.00 37.78 3.16
2050 2769 7.908601 ACTTTACGAAGTTTGATTTCAGTCAAC 59.091 33.333 0.00 0.00 43.48 3.18
2051 2770 7.981142 ACTTTACGAAGTTTGATTTCAGTCAA 58.019 30.769 0.00 0.00 43.48 3.18
2052 2771 7.548196 ACTTTACGAAGTTTGATTTCAGTCA 57.452 32.000 0.00 0.00 43.48 3.41
2066 2785 6.319399 ACAAACTTGGTCAAACTTTACGAAG 58.681 36.000 0.00 0.00 37.43 3.79
2067 2786 6.256912 ACAAACTTGGTCAAACTTTACGAA 57.743 33.333 0.00 0.00 0.00 3.85
2068 2787 5.883503 ACAAACTTGGTCAAACTTTACGA 57.116 34.783 0.00 0.00 0.00 3.43
2069 2788 7.007313 TCTACAAACTTGGTCAAACTTTACG 57.993 36.000 0.00 0.00 0.00 3.18
2070 2789 9.628746 TTTTCTACAAACTTGGTCAAACTTTAC 57.371 29.630 0.00 0.00 0.00 2.01
2205 2924 7.917505 AGTCAAGCTTTACAAACTTTGATCAAG 59.082 33.333 13.07 5.87 38.64 3.02
2206 2925 7.771183 AGTCAAGCTTTACAAACTTTGATCAA 58.229 30.769 13.07 3.38 0.00 2.57
2207 2926 7.333528 AGTCAAGCTTTACAAACTTTGATCA 57.666 32.000 13.07 0.00 0.00 2.92
2208 2927 8.634475 AAAGTCAAGCTTTACAAACTTTGATC 57.366 30.769 13.07 0.00 44.90 2.92
2212 2931 6.811665 GGTCAAAGTCAAGCTTTACAAACTTT 59.188 34.615 13.07 12.29 44.95 2.66
2213 2932 6.071616 TGGTCAAAGTCAAGCTTTACAAACTT 60.072 34.615 13.07 7.60 44.95 2.66
2214 2933 5.417580 TGGTCAAAGTCAAGCTTTACAAACT 59.582 36.000 13.07 2.11 44.95 2.66
2215 2934 5.646606 TGGTCAAAGTCAAGCTTTACAAAC 58.353 37.500 13.07 5.27 44.95 2.93
2216 2935 5.906113 TGGTCAAAGTCAAGCTTTACAAA 57.094 34.783 13.07 0.00 44.95 2.83
2217 2936 5.906113 TTGGTCAAAGTCAAGCTTTACAA 57.094 34.783 13.07 0.00 44.95 2.41
2218 2937 5.890334 CTTTGGTCAAAGTCAAGCTTTACA 58.110 37.500 13.07 0.00 44.95 2.41
2231 2950 7.209471 AGTTCGCATATTAACTTTGGTCAAA 57.791 32.000 0.00 0.00 32.00 2.69
2232 2951 6.811253 AGTTCGCATATTAACTTTGGTCAA 57.189 33.333 0.00 0.00 32.00 3.18
2233 2952 7.908827 TTAGTTCGCATATTAACTTTGGTCA 57.091 32.000 0.00 0.00 37.19 4.02
2246 2965 9.647797 TCTCTCTGTTTTTATTTAGTTCGCATA 57.352 29.630 0.00 0.00 0.00 3.14
2247 2966 8.547967 TCTCTCTGTTTTTATTTAGTTCGCAT 57.452 30.769 0.00 0.00 0.00 4.73
2248 2967 7.360101 GCTCTCTCTGTTTTTATTTAGTTCGCA 60.360 37.037 0.00 0.00 0.00 5.10
2249 2968 6.956520 GCTCTCTCTGTTTTTATTTAGTTCGC 59.043 38.462 0.00 0.00 0.00 4.70
2250 2969 8.018677 TGCTCTCTCTGTTTTTATTTAGTTCG 57.981 34.615 0.00 0.00 0.00 3.95
2260 2979 9.294614 AGAAATTCTATTGCTCTCTCTGTTTTT 57.705 29.630 0.00 0.00 0.00 1.94
2261 2980 8.860780 AGAAATTCTATTGCTCTCTCTGTTTT 57.139 30.769 0.00 0.00 0.00 2.43
2262 2981 8.728833 CAAGAAATTCTATTGCTCTCTCTGTTT 58.271 33.333 0.00 0.00 0.00 2.83
2263 2982 7.882271 ACAAGAAATTCTATTGCTCTCTCTGTT 59.118 33.333 0.00 0.00 0.00 3.16
2264 2983 7.333921 CACAAGAAATTCTATTGCTCTCTCTGT 59.666 37.037 0.00 0.00 0.00 3.41
2265 2984 7.333921 ACACAAGAAATTCTATTGCTCTCTCTG 59.666 37.037 0.00 0.00 0.00 3.35
2266 2985 7.393216 ACACAAGAAATTCTATTGCTCTCTCT 58.607 34.615 0.00 0.00 0.00 3.10
2267 2986 7.463913 CGACACAAGAAATTCTATTGCTCTCTC 60.464 40.741 0.00 0.00 0.00 3.20
2268 2987 6.312426 CGACACAAGAAATTCTATTGCTCTCT 59.688 38.462 0.00 0.00 0.00 3.10
2269 2988 6.473521 CGACACAAGAAATTCTATTGCTCTC 58.526 40.000 0.00 0.00 0.00 3.20
2270 2989 5.163814 GCGACACAAGAAATTCTATTGCTCT 60.164 40.000 0.00 0.00 0.00 4.09
2271 2990 5.024555 GCGACACAAGAAATTCTATTGCTC 58.975 41.667 0.00 0.00 0.00 4.26
2272 2991 4.455533 TGCGACACAAGAAATTCTATTGCT 59.544 37.500 0.00 0.00 0.00 3.91
2273 2992 4.722194 TGCGACACAAGAAATTCTATTGC 58.278 39.130 0.00 0.00 0.00 3.56
2274 2993 6.169419 TCTGCGACACAAGAAATTCTATTG 57.831 37.500 0.00 0.00 0.00 1.90
2275 2994 6.603095 GTTCTGCGACACAAGAAATTCTATT 58.397 36.000 0.00 0.00 0.00 1.73
2276 2995 5.163953 CGTTCTGCGACACAAGAAATTCTAT 60.164 40.000 0.00 0.00 44.77 1.98
2277 2996 4.149922 CGTTCTGCGACACAAGAAATTCTA 59.850 41.667 0.00 0.00 44.77 2.10
2278 2997 3.059597 CGTTCTGCGACACAAGAAATTCT 60.060 43.478 0.00 0.00 44.77 2.40
2374 3093 0.960364 ATGCGGTGAAGTTTCGGCAT 60.960 50.000 15.66 15.66 36.81 4.40
2400 3119 9.240159 GTAAAGTATAGTTTGGTTGGTGTTTTG 57.760 33.333 14.62 0.00 0.00 2.44
2401 3120 9.192642 AGTAAAGTATAGTTTGGTTGGTGTTTT 57.807 29.630 14.62 0.00 0.00 2.43
2404 3123 8.098912 CCTAGTAAAGTATAGTTTGGTTGGTGT 58.901 37.037 14.62 0.00 0.00 4.16
2625 3345 4.265056 GCCACACGGGGAACAGGT 62.265 66.667 0.00 0.00 37.04 4.00
2829 3549 0.753262 TCTCCTTCCTGGCTAATCGC 59.247 55.000 0.00 0.00 35.26 4.58
2831 3551 2.774809 AGGTTCTCCTTCCTGGCTAATC 59.225 50.000 0.00 0.00 42.12 1.75
2832 3552 2.507471 CAGGTTCTCCTTCCTGGCTAAT 59.493 50.000 3.58 0.00 45.11 1.73
2833 3553 1.909302 CAGGTTCTCCTTCCTGGCTAA 59.091 52.381 3.58 0.00 45.11 3.09
2834 3554 1.573108 CAGGTTCTCCTTCCTGGCTA 58.427 55.000 3.58 0.00 45.11 3.93
2835 3555 2.381445 CAGGTTCTCCTTCCTGGCT 58.619 57.895 3.58 0.00 45.11 4.75
2839 3559 1.827969 CATCGTCAGGTTCTCCTTCCT 59.172 52.381 0.00 0.00 43.07 3.36
2840 3560 1.550976 ACATCGTCAGGTTCTCCTTCC 59.449 52.381 0.00 0.00 43.07 3.46
2872 3592 1.399714 CCATCTGCAGCACATGGAAT 58.600 50.000 22.08 1.09 39.73 3.01
2940 3660 2.100631 CGACAGGTCGTTCATGGCC 61.101 63.158 13.35 0.00 46.99 5.36
2964 3684 1.717032 AGTAGTTCACCAGCACCAGA 58.283 50.000 0.00 0.00 0.00 3.86
2997 3717 2.742372 CACGCCTCCGGGAAGTTG 60.742 66.667 0.00 0.00 41.39 3.16
3043 3763 3.044305 GTGGCAGGTGTCGAGCAC 61.044 66.667 8.94 8.94 46.97 4.40
3069 3789 3.346734 TTGGCCCATCTGTCCCCC 61.347 66.667 0.00 0.00 0.00 5.40
3327 4111 0.688487 AAACATTGGCAGGCAAGCAT 59.312 45.000 15.57 0.02 35.83 3.79
3340 4124 3.005261 TGCCGAAACATGCAGTAAACATT 59.995 39.130 0.00 0.00 32.77 2.71
3520 4329 3.982516 AGTAGATCAGTGAAGGTGGCTA 58.017 45.455 0.00 0.00 0.00 3.93
3587 4396 2.215942 TACAGTCTGCCAGCTAGTCA 57.784 50.000 0.00 0.00 0.00 3.41
3594 4403 4.433615 ACGTATGATTTACAGTCTGCCAG 58.566 43.478 0.00 0.00 0.00 4.85
3675 4516 4.662278 TGGCCTAGCAGAAATTTAACAGT 58.338 39.130 3.32 0.00 0.00 3.55
3681 4522 5.170748 CGAATTTTGGCCTAGCAGAAATTT 58.829 37.500 3.32 0.00 35.96 1.82
3752 4593 8.997323 CCAAATATGCATAACTTCCAAACAAAA 58.003 29.630 11.13 0.00 0.00 2.44
3767 4608 4.082125 GCCCTTAGCTACCAAATATGCAT 58.918 43.478 3.79 3.79 38.99 3.96
3801 4642 3.524095 TTGCGGGGGATTTGATGATAT 57.476 42.857 0.00 0.00 0.00 1.63
3802 4643 3.304911 TTTGCGGGGGATTTGATGATA 57.695 42.857 0.00 0.00 0.00 2.15
3807 4648 1.181786 GACATTTGCGGGGGATTTGA 58.818 50.000 0.00 0.00 0.00 2.69
3827 4668 3.984508 ATATCTACACTGTCCGGTTCG 57.015 47.619 0.00 0.00 0.00 3.95
3865 4706 3.826157 GGTCCAGACAATTTTGATGACCA 59.174 43.478 14.37 0.00 0.00 4.02
3901 4742 0.038618 GTGCCGGTTTGTGGGATTTC 60.039 55.000 1.90 0.00 0.00 2.17
3915 4756 3.047877 GTCCCTCGTTTGGTGCCG 61.048 66.667 0.00 0.00 0.00 5.69
3925 4766 3.839432 GGAGAAGCCCGTCCCTCG 61.839 72.222 0.00 0.00 39.52 4.63
3932 4773 1.219393 GAGGAGTTGGAGAAGCCCG 59.781 63.158 0.00 0.00 34.97 6.13
3933 4774 0.912006 AGGAGGAGTTGGAGAAGCCC 60.912 60.000 0.00 0.00 34.97 5.19
3936 4777 2.499693 GAGGAAGGAGGAGTTGGAGAAG 59.500 54.545 0.00 0.00 0.00 2.85
3971 4813 1.002659 TCGGAATTGTGTAGGGTGTGG 59.997 52.381 0.00 0.00 0.00 4.17
3973 4815 1.002773 GGTCGGAATTGTGTAGGGTGT 59.997 52.381 0.00 0.00 0.00 4.16
3980 4822 1.002624 ATGGCGGTCGGAATTGTGT 60.003 52.632 0.00 0.00 0.00 3.72
3981 4823 1.305219 ACATGGCGGTCGGAATTGTG 61.305 55.000 0.00 0.00 0.00 3.33
3982 4824 0.250793 TACATGGCGGTCGGAATTGT 59.749 50.000 0.00 0.00 0.00 2.71
3984 4826 0.179056 CCTACATGGCGGTCGGAATT 60.179 55.000 0.00 0.00 0.00 2.17
3986 4828 2.897207 CCTACATGGCGGTCGGAA 59.103 61.111 0.00 0.00 0.00 4.30
4011 4873 3.706373 ATGGTGCGGCGAAGGTCT 61.706 61.111 12.98 0.00 0.00 3.85
4034 4896 1.073284 GTAGTCCAAGGTGGGAAAGCA 59.927 52.381 0.00 0.00 39.05 3.91
4043 4905 1.640917 ACGATGGTGTAGTCCAAGGT 58.359 50.000 0.00 0.00 41.09 3.50
4053 4915 1.640917 ACCCAGTAGAACGATGGTGT 58.359 50.000 0.00 0.00 31.85 4.16
4058 4920 3.782046 CGATGAAACCCAGTAGAACGAT 58.218 45.455 0.00 0.00 0.00 3.73
4059 4921 2.673043 GCGATGAAACCCAGTAGAACGA 60.673 50.000 0.00 0.00 0.00 3.85
4071 4935 3.972502 GGTTACTTGTGTTGCGATGAAAC 59.027 43.478 0.00 0.00 0.00 2.78
4074 4938 3.064207 GAGGTTACTTGTGTTGCGATGA 58.936 45.455 0.00 0.00 0.00 2.92
4082 4946 0.320697 GGAGCGGAGGTTACTTGTGT 59.679 55.000 0.00 0.00 39.88 3.72
4085 4949 0.108138 CAGGGAGCGGAGGTTACTTG 60.108 60.000 0.00 0.00 39.88 3.16
4087 4951 2.359967 GCAGGGAGCGGAGGTTACT 61.360 63.158 0.00 0.00 39.88 2.24
4113 4977 1.094785 GCGTGGTGTTTGCTATGGAT 58.905 50.000 0.00 0.00 0.00 3.41
4128 4992 1.625616 CCGAACACTTACTAGGCGTG 58.374 55.000 0.00 0.72 34.92 5.34
4135 4999 1.539827 GCATTTGGCCGAACACTTACT 59.460 47.619 7.84 0.00 36.11 2.24
4205 5069 7.782049 TGTAGAAGTACTTCATTCGAATCCAT 58.218 34.615 31.80 13.06 41.84 3.41
4214 5078 8.958119 TGAACTTGTTGTAGAAGTACTTCATT 57.042 30.769 31.80 18.01 41.84 2.57
4233 5099 4.510340 GTGTTACAACGACTCCATGAACTT 59.490 41.667 0.00 0.00 0.00 2.66
4258 5124 4.067896 GTGGGAGATATAGCCACATTGTG 58.932 47.826 9.92 9.92 0.00 3.33
4259 5125 3.244215 CGTGGGAGATATAGCCACATTGT 60.244 47.826 0.00 0.00 0.00 2.71
4260 5126 3.244215 ACGTGGGAGATATAGCCACATTG 60.244 47.826 0.00 0.00 0.00 2.82
4261 5127 2.972713 ACGTGGGAGATATAGCCACATT 59.027 45.455 0.00 0.00 0.00 2.71
4262 5128 2.300152 CACGTGGGAGATATAGCCACAT 59.700 50.000 7.95 0.00 0.00 3.21
4263 5129 1.686587 CACGTGGGAGATATAGCCACA 59.313 52.381 7.95 0.00 0.00 4.17
4264 5130 1.687123 ACACGTGGGAGATATAGCCAC 59.313 52.381 21.57 0.00 0.00 5.01
4265 5131 1.961394 GACACGTGGGAGATATAGCCA 59.039 52.381 21.57 0.00 0.00 4.75
4266 5132 1.068472 CGACACGTGGGAGATATAGCC 60.068 57.143 21.57 0.00 0.00 3.93
4267 5133 1.068472 CCGACACGTGGGAGATATAGC 60.068 57.143 21.57 0.00 0.00 2.97
4268 5134 2.991434 CCGACACGTGGGAGATATAG 57.009 55.000 21.57 0.00 0.00 1.31
4284 5150 3.691342 CTCCAAGTCGTGCCCCGA 61.691 66.667 0.00 0.00 45.00 5.14
4285 5151 4.760047 CCTCCAAGTCGTGCCCCG 62.760 72.222 0.00 0.00 38.13 5.73
4287 5153 2.252072 TATGCCTCCAAGTCGTGCCC 62.252 60.000 0.00 0.00 0.00 5.36
4288 5154 0.811616 CTATGCCTCCAAGTCGTGCC 60.812 60.000 0.00 0.00 0.00 5.01
4289 5155 1.432270 GCTATGCCTCCAAGTCGTGC 61.432 60.000 0.00 0.00 0.00 5.34
4290 5156 0.811616 GGCTATGCCTCCAAGTCGTG 60.812 60.000 0.73 0.00 46.69 4.35
4291 5157 1.522569 GGCTATGCCTCCAAGTCGT 59.477 57.895 0.73 0.00 46.69 4.34
4292 5158 4.445699 GGCTATGCCTCCAAGTCG 57.554 61.111 0.73 0.00 46.69 4.18
4301 5167 0.036010 ACCTATCATGCGGCTATGCC 60.036 55.000 0.00 0.00 46.75 4.40
4302 5168 1.813513 AACCTATCATGCGGCTATGC 58.186 50.000 0.00 0.00 0.00 3.14
4303 5169 4.268644 CGATAAACCTATCATGCGGCTATG 59.731 45.833 0.00 3.89 34.62 2.23
4304 5170 4.433615 CGATAAACCTATCATGCGGCTAT 58.566 43.478 0.00 0.00 34.62 2.97
4305 5171 3.845178 CGATAAACCTATCATGCGGCTA 58.155 45.455 0.00 0.00 34.62 3.93
4306 5172 2.688507 CGATAAACCTATCATGCGGCT 58.311 47.619 0.00 0.00 34.62 5.52
4307 5173 1.128692 GCGATAAACCTATCATGCGGC 59.871 52.381 0.00 0.00 34.62 6.53
4308 5174 2.412870 TGCGATAAACCTATCATGCGG 58.587 47.619 0.00 0.00 34.62 5.69
4309 5175 3.740832 TCTTGCGATAAACCTATCATGCG 59.259 43.478 0.00 0.00 34.62 4.73
4310 5176 4.153117 CCTCTTGCGATAAACCTATCATGC 59.847 45.833 0.00 0.00 34.62 4.06
4311 5177 4.692625 CCCTCTTGCGATAAACCTATCATG 59.307 45.833 0.00 0.00 34.62 3.07
4312 5178 4.263068 CCCCTCTTGCGATAAACCTATCAT 60.263 45.833 0.00 0.00 34.62 2.45
4313 5179 3.071023 CCCCTCTTGCGATAAACCTATCA 59.929 47.826 0.00 0.00 34.62 2.15
4314 5180 3.071167 ACCCCTCTTGCGATAAACCTATC 59.929 47.826 0.00 0.00 0.00 2.08
4315 5181 3.046374 ACCCCTCTTGCGATAAACCTAT 58.954 45.455 0.00 0.00 0.00 2.57
4316 5182 2.474112 ACCCCTCTTGCGATAAACCTA 58.526 47.619 0.00 0.00 0.00 3.08
4317 5183 1.286248 ACCCCTCTTGCGATAAACCT 58.714 50.000 0.00 0.00 0.00 3.50
4318 5184 2.994186 TACCCCTCTTGCGATAAACC 57.006 50.000 0.00 0.00 0.00 3.27
4319 5185 4.704965 AGATTACCCCTCTTGCGATAAAC 58.295 43.478 0.00 0.00 0.00 2.01
4320 5186 5.104693 TGAAGATTACCCCTCTTGCGATAAA 60.105 40.000 0.00 0.00 33.18 1.40
4321 5187 4.407621 TGAAGATTACCCCTCTTGCGATAA 59.592 41.667 0.00 0.00 33.18 1.75
4322 5188 3.964688 TGAAGATTACCCCTCTTGCGATA 59.035 43.478 0.00 0.00 33.18 2.92
4323 5189 2.771943 TGAAGATTACCCCTCTTGCGAT 59.228 45.455 0.00 0.00 33.18 4.58
4324 5190 2.093658 GTGAAGATTACCCCTCTTGCGA 60.094 50.000 0.00 0.00 33.18 5.10
4325 5191 2.280628 GTGAAGATTACCCCTCTTGCG 58.719 52.381 0.00 0.00 33.18 4.85
4326 5192 3.010420 GTGTGAAGATTACCCCTCTTGC 58.990 50.000 0.00 0.00 33.18 4.01
4327 5193 4.286297 TGTGTGAAGATTACCCCTCTTG 57.714 45.455 0.00 0.00 33.18 3.02
4328 5194 4.080299 GGATGTGTGAAGATTACCCCTCTT 60.080 45.833 0.00 0.00 35.69 2.85
4329 5195 3.456277 GGATGTGTGAAGATTACCCCTCT 59.544 47.826 0.00 0.00 0.00 3.69
4330 5196 3.433740 GGGATGTGTGAAGATTACCCCTC 60.434 52.174 0.00 0.00 0.00 4.30
4331 5197 2.509964 GGGATGTGTGAAGATTACCCCT 59.490 50.000 0.00 0.00 0.00 4.79
4332 5198 2.241176 TGGGATGTGTGAAGATTACCCC 59.759 50.000 0.00 0.00 35.69 4.95
4333 5199 3.644966 TGGGATGTGTGAAGATTACCC 57.355 47.619 0.00 0.00 36.92 3.69
4334 5200 4.526970 ACATGGGATGTGTGAAGATTACC 58.473 43.478 0.00 0.00 43.01 2.85
4335 5201 6.258727 CAGTACATGGGATGTGTGAAGATTAC 59.741 42.308 0.00 0.00 44.60 1.89
4336 5202 6.156083 TCAGTACATGGGATGTGTGAAGATTA 59.844 38.462 0.00 0.00 44.60 1.75
4337 5203 5.045651 TCAGTACATGGGATGTGTGAAGATT 60.046 40.000 0.00 0.00 44.60 2.40
4338 5204 4.471025 TCAGTACATGGGATGTGTGAAGAT 59.529 41.667 0.00 0.00 44.60 2.40
4339 5205 3.837731 TCAGTACATGGGATGTGTGAAGA 59.162 43.478 0.00 0.00 44.60 2.87
4340 5206 4.206477 TCAGTACATGGGATGTGTGAAG 57.794 45.455 0.00 0.00 44.60 3.02
4341 5207 4.632327 TTCAGTACATGGGATGTGTGAA 57.368 40.909 0.00 10.19 44.60 3.18
4342 5208 4.842531 ATTCAGTACATGGGATGTGTGA 57.157 40.909 0.00 0.55 44.60 3.58
4343 5209 6.348498 TCTTATTCAGTACATGGGATGTGTG 58.652 40.000 0.00 0.00 44.60 3.82
4344 5210 6.560003 TCTTATTCAGTACATGGGATGTGT 57.440 37.500 0.00 0.00 44.60 3.72
4345 5211 7.012704 CCTTTCTTATTCAGTACATGGGATGTG 59.987 40.741 0.00 0.00 44.60 3.21
4346 5212 7.056635 CCTTTCTTATTCAGTACATGGGATGT 58.943 38.462 0.00 0.00 46.92 3.06
4347 5213 6.488006 CCCTTTCTTATTCAGTACATGGGATG 59.512 42.308 0.00 0.00 31.98 3.51
4348 5214 6.389869 TCCCTTTCTTATTCAGTACATGGGAT 59.610 38.462 0.00 0.00 34.37 3.85
4349 5215 5.729229 TCCCTTTCTTATTCAGTACATGGGA 59.271 40.000 0.00 0.00 36.62 4.37
4350 5216 6.001449 TCCCTTTCTTATTCAGTACATGGG 57.999 41.667 0.00 0.00 0.00 4.00
4351 5217 9.627123 TTTATCCCTTTCTTATTCAGTACATGG 57.373 33.333 0.00 0.00 0.00 3.66
4357 5223 9.454859 CAACTCTTTATCCCTTTCTTATTCAGT 57.545 33.333 0.00 0.00 0.00 3.41
4358 5224 8.897752 CCAACTCTTTATCCCTTTCTTATTCAG 58.102 37.037 0.00 0.00 0.00 3.02
4359 5225 7.339466 GCCAACTCTTTATCCCTTTCTTATTCA 59.661 37.037 0.00 0.00 0.00 2.57
4360 5226 7.558081 AGCCAACTCTTTATCCCTTTCTTATTC 59.442 37.037 0.00 0.00 0.00 1.75
4361 5227 7.414266 AGCCAACTCTTTATCCCTTTCTTATT 58.586 34.615 0.00 0.00 0.00 1.40
4362 5228 6.974795 AGCCAACTCTTTATCCCTTTCTTAT 58.025 36.000 0.00 0.00 0.00 1.73
4363 5229 6.388619 AGCCAACTCTTTATCCCTTTCTTA 57.611 37.500 0.00 0.00 0.00 2.10
4364 5230 5.262455 AGCCAACTCTTTATCCCTTTCTT 57.738 39.130 0.00 0.00 0.00 2.52
4365 5231 4.936685 AGCCAACTCTTTATCCCTTTCT 57.063 40.909 0.00 0.00 0.00 2.52
4366 5232 5.944007 TGTAAGCCAACTCTTTATCCCTTTC 59.056 40.000 0.00 0.00 0.00 2.62
4367 5233 5.887754 TGTAAGCCAACTCTTTATCCCTTT 58.112 37.500 0.00 0.00 0.00 3.11
4368 5234 5.514500 TGTAAGCCAACTCTTTATCCCTT 57.486 39.130 0.00 0.00 0.00 3.95
4369 5235 5.514500 TTGTAAGCCAACTCTTTATCCCT 57.486 39.130 0.00 0.00 0.00 4.20
4370 5236 5.007724 CGATTGTAAGCCAACTCTTTATCCC 59.992 44.000 0.00 0.00 35.44 3.85
4371 5237 5.504173 GCGATTGTAAGCCAACTCTTTATCC 60.504 44.000 0.00 0.00 35.44 2.59
4372 5238 5.502606 GCGATTGTAAGCCAACTCTTTATC 58.497 41.667 0.00 0.00 35.44 1.75
4373 5239 5.485662 GCGATTGTAAGCCAACTCTTTAT 57.514 39.130 0.00 0.00 35.44 1.40
4374 5240 4.939509 GCGATTGTAAGCCAACTCTTTA 57.060 40.909 0.00 0.00 35.44 1.85
4375 5241 3.831715 GCGATTGTAAGCCAACTCTTT 57.168 42.857 0.00 0.00 35.44 2.52
4384 5250 1.804151 TGTGAAGTGGCGATTGTAAGC 59.196 47.619 0.00 0.00 0.00 3.09
4385 5251 2.805671 TGTGTGAAGTGGCGATTGTAAG 59.194 45.455 0.00 0.00 0.00 2.34
4386 5252 2.839975 TGTGTGAAGTGGCGATTGTAA 58.160 42.857 0.00 0.00 0.00 2.41
4387 5253 2.535012 TGTGTGAAGTGGCGATTGTA 57.465 45.000 0.00 0.00 0.00 2.41
4388 5254 1.674359 TTGTGTGAAGTGGCGATTGT 58.326 45.000 0.00 0.00 0.00 2.71
4389 5255 2.772568 TTTGTGTGAAGTGGCGATTG 57.227 45.000 0.00 0.00 0.00 2.67
4390 5256 3.818210 TGTATTTGTGTGAAGTGGCGATT 59.182 39.130 0.00 0.00 0.00 3.34
4391 5257 3.407698 TGTATTTGTGTGAAGTGGCGAT 58.592 40.909 0.00 0.00 0.00 4.58
4392 5258 2.839975 TGTATTTGTGTGAAGTGGCGA 58.160 42.857 0.00 0.00 0.00 5.54
4393 5259 3.003275 ACTTGTATTTGTGTGAAGTGGCG 59.997 43.478 0.00 0.00 0.00 5.69
4394 5260 4.568152 ACTTGTATTTGTGTGAAGTGGC 57.432 40.909 0.00 0.00 0.00 5.01
4395 5261 7.971168 TGTTTAACTTGTATTTGTGTGAAGTGG 59.029 33.333 0.00 0.00 0.00 4.00
4396 5262 8.903570 TGTTTAACTTGTATTTGTGTGAAGTG 57.096 30.769 0.00 0.00 0.00 3.16
4410 5276 9.077885 ACTTTGGATGATGTATGTTTAACTTGT 57.922 29.630 0.00 0.00 0.00 3.16
4413 5279 9.733556 TGTACTTTGGATGATGTATGTTTAACT 57.266 29.630 0.00 0.00 0.00 2.24
4417 5283 9.241919 TGATTGTACTTTGGATGATGTATGTTT 57.758 29.630 0.00 0.00 0.00 2.83
4418 5284 8.806429 TGATTGTACTTTGGATGATGTATGTT 57.194 30.769 0.00 0.00 0.00 2.71
4419 5285 8.806429 TTGATTGTACTTTGGATGATGTATGT 57.194 30.769 0.00 0.00 0.00 2.29
4420 5286 8.347771 CCTTGATTGTACTTTGGATGATGTATG 58.652 37.037 0.00 0.00 0.00 2.39
4421 5287 8.055181 ACCTTGATTGTACTTTGGATGATGTAT 58.945 33.333 0.00 0.00 0.00 2.29
4422 5288 7.402054 ACCTTGATTGTACTTTGGATGATGTA 58.598 34.615 0.00 0.00 0.00 2.29
4423 5289 6.248433 ACCTTGATTGTACTTTGGATGATGT 58.752 36.000 0.00 0.00 0.00 3.06
4424 5290 6.183360 GGACCTTGATTGTACTTTGGATGATG 60.183 42.308 0.00 0.00 0.00 3.07
4425 5291 5.888161 GGACCTTGATTGTACTTTGGATGAT 59.112 40.000 0.00 0.00 0.00 2.45
4426 5292 5.253330 GGACCTTGATTGTACTTTGGATGA 58.747 41.667 0.00 0.00 0.00 2.92
4427 5293 4.094887 CGGACCTTGATTGTACTTTGGATG 59.905 45.833 0.00 0.00 0.00 3.51
4428 5294 4.019681 TCGGACCTTGATTGTACTTTGGAT 60.020 41.667 0.00 0.00 0.00 3.41
4429 5295 3.325425 TCGGACCTTGATTGTACTTTGGA 59.675 43.478 0.00 0.00 0.00 3.53
4430 5296 3.435671 GTCGGACCTTGATTGTACTTTGG 59.564 47.826 0.00 0.00 0.00 3.28
4431 5297 4.315803 AGTCGGACCTTGATTGTACTTTG 58.684 43.478 4.14 0.00 0.00 2.77
4432 5298 4.618920 AGTCGGACCTTGATTGTACTTT 57.381 40.909 4.14 0.00 0.00 2.66
4433 5299 4.380233 CGTAGTCGGACCTTGATTGTACTT 60.380 45.833 4.14 0.00 0.00 2.24
4434 5300 3.128242 CGTAGTCGGACCTTGATTGTACT 59.872 47.826 4.14 0.00 0.00 2.73
4435 5301 3.432782 CGTAGTCGGACCTTGATTGTAC 58.567 50.000 4.14 0.00 0.00 2.90
4436 5302 3.770263 CGTAGTCGGACCTTGATTGTA 57.230 47.619 4.14 0.00 0.00 2.41
4437 5303 2.649331 CGTAGTCGGACCTTGATTGT 57.351 50.000 4.14 0.00 0.00 2.71
4449 5315 5.409214 TCCTTTATTTTTGGTTCCGTAGTCG 59.591 40.000 0.00 0.00 0.00 4.18
4450 5316 6.806388 TCCTTTATTTTTGGTTCCGTAGTC 57.194 37.500 0.00 0.00 0.00 2.59
4451 5317 6.999871 TCTTCCTTTATTTTTGGTTCCGTAGT 59.000 34.615 0.00 0.00 0.00 2.73
4452 5318 7.040961 TGTCTTCCTTTATTTTTGGTTCCGTAG 60.041 37.037 0.00 0.00 0.00 3.51
4453 5319 6.771749 TGTCTTCCTTTATTTTTGGTTCCGTA 59.228 34.615 0.00 0.00 0.00 4.02
4454 5320 5.595133 TGTCTTCCTTTATTTTTGGTTCCGT 59.405 36.000 0.00 0.00 0.00 4.69
4455 5321 6.079424 TGTCTTCCTTTATTTTTGGTTCCG 57.921 37.500 0.00 0.00 0.00 4.30
4456 5322 6.704493 GGTTGTCTTCCTTTATTTTTGGTTCC 59.296 38.462 0.00 0.00 0.00 3.62
4457 5323 6.704493 GGGTTGTCTTCCTTTATTTTTGGTTC 59.296 38.462 0.00 0.00 0.00 3.62
4458 5324 6.408776 GGGGTTGTCTTCCTTTATTTTTGGTT 60.409 38.462 0.00 0.00 0.00 3.67
4459 5325 5.071250 GGGGTTGTCTTCCTTTATTTTTGGT 59.929 40.000 0.00 0.00 0.00 3.67
4460 5326 5.071115 TGGGGTTGTCTTCCTTTATTTTTGG 59.929 40.000 0.00 0.00 0.00 3.28
4461 5327 6.168270 TGGGGTTGTCTTCCTTTATTTTTG 57.832 37.500 0.00 0.00 0.00 2.44
4462 5328 6.816616 TTGGGGTTGTCTTCCTTTATTTTT 57.183 33.333 0.00 0.00 0.00 1.94
4463 5329 6.816616 TTTGGGGTTGTCTTCCTTTATTTT 57.183 33.333 0.00 0.00 0.00 1.82
4464 5330 6.744056 GCATTTGGGGTTGTCTTCCTTTATTT 60.744 38.462 0.00 0.00 0.00 1.40
4465 5331 5.279960 GCATTTGGGGTTGTCTTCCTTTATT 60.280 40.000 0.00 0.00 0.00 1.40
4466 5332 4.222810 GCATTTGGGGTTGTCTTCCTTTAT 59.777 41.667 0.00 0.00 0.00 1.40
4467 5333 3.576550 GCATTTGGGGTTGTCTTCCTTTA 59.423 43.478 0.00 0.00 0.00 1.85
4468 5334 2.368548 GCATTTGGGGTTGTCTTCCTTT 59.631 45.455 0.00 0.00 0.00 3.11
4469 5335 1.970640 GCATTTGGGGTTGTCTTCCTT 59.029 47.619 0.00 0.00 0.00 3.36
4470 5336 1.147817 AGCATTTGGGGTTGTCTTCCT 59.852 47.619 0.00 0.00 0.00 3.36
4471 5337 1.632589 AGCATTTGGGGTTGTCTTCC 58.367 50.000 0.00 0.00 0.00 3.46
4472 5338 3.686016 TCTAGCATTTGGGGTTGTCTTC 58.314 45.455 0.00 0.00 0.00 2.87
4473 5339 3.806949 TCTAGCATTTGGGGTTGTCTT 57.193 42.857 0.00 0.00 0.00 3.01
4474 5340 3.372025 GGATCTAGCATTTGGGGTTGTCT 60.372 47.826 0.00 0.00 0.00 3.41
4475 5341 2.952310 GGATCTAGCATTTGGGGTTGTC 59.048 50.000 0.00 0.00 0.00 3.18
4476 5342 2.358195 GGGATCTAGCATTTGGGGTTGT 60.358 50.000 0.00 0.00 0.00 3.32
4477 5343 2.091665 AGGGATCTAGCATTTGGGGTTG 60.092 50.000 0.00 0.00 0.00 3.77
4478 5344 2.217776 AGGGATCTAGCATTTGGGGTT 58.782 47.619 0.00 0.00 0.00 4.11
4479 5345 1.912862 AGGGATCTAGCATTTGGGGT 58.087 50.000 0.00 0.00 0.00 4.95
4480 5346 4.664688 ATTAGGGATCTAGCATTTGGGG 57.335 45.455 0.00 0.00 0.00 4.96
4481 5347 6.830838 GGATAATTAGGGATCTAGCATTTGGG 59.169 42.308 0.00 0.00 0.00 4.12
4482 5348 7.637511 AGGATAATTAGGGATCTAGCATTTGG 58.362 38.462 0.00 0.00 0.00 3.28
4487 5353 8.772250 CCAATTAGGATAATTAGGGATCTAGCA 58.228 37.037 0.00 0.00 41.22 3.49
4488 5354 8.214364 CCCAATTAGGATAATTAGGGATCTAGC 58.786 40.741 16.61 0.00 41.22 3.42
4489 5355 8.214364 GCCCAATTAGGATAATTAGGGATCTAG 58.786 40.741 21.39 0.00 41.22 2.43
4490 5356 7.912204 AGCCCAATTAGGATAATTAGGGATCTA 59.088 37.037 21.39 0.00 41.22 1.98
4491 5357 6.742404 AGCCCAATTAGGATAATTAGGGATCT 59.258 38.462 21.39 13.22 41.22 2.75
4492 5358 6.974795 AGCCCAATTAGGATAATTAGGGATC 58.025 40.000 21.39 12.00 41.22 3.36
4493 5359 6.068794 GGAGCCCAATTAGGATAATTAGGGAT 60.069 42.308 21.39 18.20 41.22 3.85
4494 5360 5.253096 GGAGCCCAATTAGGATAATTAGGGA 59.747 44.000 21.39 0.00 41.22 4.20
4495 5361 5.015178 TGGAGCCCAATTAGGATAATTAGGG 59.985 44.000 16.96 16.96 41.22 3.53
4496 5362 5.946377 GTGGAGCCCAATTAGGATAATTAGG 59.054 44.000 0.00 3.29 41.22 2.69
4497 5363 6.784031 AGTGGAGCCCAATTAGGATAATTAG 58.216 40.000 0.00 0.00 41.22 1.73
4498 5364 6.780198 AGTGGAGCCCAATTAGGATAATTA 57.220 37.500 0.00 0.00 41.22 1.40
4499 5365 5.669798 AGTGGAGCCCAATTAGGATAATT 57.330 39.130 0.00 0.00 41.22 1.40
4500 5366 5.852250 AGTAGTGGAGCCCAATTAGGATAAT 59.148 40.000 0.00 0.00 41.22 1.28
4501 5367 5.071788 CAGTAGTGGAGCCCAATTAGGATAA 59.928 44.000 0.00 0.00 41.22 1.75
4502 5368 4.593206 CAGTAGTGGAGCCCAATTAGGATA 59.407 45.833 0.00 0.00 41.22 2.59
4503 5369 3.392616 CAGTAGTGGAGCCCAATTAGGAT 59.607 47.826 0.00 0.00 41.22 3.24
4504 5370 2.771943 CAGTAGTGGAGCCCAATTAGGA 59.228 50.000 0.00 0.00 41.22 2.94
4505 5371 2.771943 TCAGTAGTGGAGCCCAATTAGG 59.228 50.000 0.00 0.00 34.18 2.69
4506 5372 4.101585 TGATCAGTAGTGGAGCCCAATTAG 59.898 45.833 0.00 0.00 34.18 1.73
4507 5373 4.037222 TGATCAGTAGTGGAGCCCAATTA 58.963 43.478 0.00 0.00 34.18 1.40
4508 5374 2.846206 TGATCAGTAGTGGAGCCCAATT 59.154 45.455 0.00 0.00 34.18 2.32
4509 5375 2.481441 TGATCAGTAGTGGAGCCCAAT 58.519 47.619 0.00 0.03 34.18 3.16
4510 5376 1.951209 TGATCAGTAGTGGAGCCCAA 58.049 50.000 0.00 0.00 34.18 4.12
4511 5377 1.951209 TTGATCAGTAGTGGAGCCCA 58.049 50.000 0.00 0.00 0.00 5.36
4512 5378 3.007398 CCTATTGATCAGTAGTGGAGCCC 59.993 52.174 20.22 0.00 0.00 5.19
4513 5379 3.898123 TCCTATTGATCAGTAGTGGAGCC 59.102 47.826 20.22 0.00 0.00 4.70
4514 5380 5.537300 TTCCTATTGATCAGTAGTGGAGC 57.463 43.478 20.22 0.00 0.00 4.70
4515 5381 5.980116 CGTTTCCTATTGATCAGTAGTGGAG 59.020 44.000 20.22 8.22 0.00 3.86
4516 5382 5.655090 TCGTTTCCTATTGATCAGTAGTGGA 59.345 40.000 20.22 11.84 0.00 4.02
4517 5383 5.902681 TCGTTTCCTATTGATCAGTAGTGG 58.097 41.667 20.22 9.97 0.00 4.00
4518 5384 7.330946 TGTTTCGTTTCCTATTGATCAGTAGTG 59.669 37.037 20.22 13.31 0.00 2.74
4519 5385 7.383687 TGTTTCGTTTCCTATTGATCAGTAGT 58.616 34.615 20.22 1.77 0.00 2.73
4520 5386 7.827819 TGTTTCGTTTCCTATTGATCAGTAG 57.172 36.000 16.30 16.30 0.00 2.57
4521 5387 8.610248 TTTGTTTCGTTTCCTATTGATCAGTA 57.390 30.769 0.00 0.00 0.00 2.74
4522 5388 7.504924 TTTGTTTCGTTTCCTATTGATCAGT 57.495 32.000 0.00 0.00 0.00 3.41
4523 5389 7.860373 TGTTTTGTTTCGTTTCCTATTGATCAG 59.140 33.333 0.00 0.00 0.00 2.90
4524 5390 7.708051 TGTTTTGTTTCGTTTCCTATTGATCA 58.292 30.769 0.00 0.00 0.00 2.92
4525 5391 8.568732 TTGTTTTGTTTCGTTTCCTATTGATC 57.431 30.769 0.00 0.00 0.00 2.92
4526 5392 8.977505 CATTGTTTTGTTTCGTTTCCTATTGAT 58.022 29.630 0.00 0.00 0.00 2.57
4527 5393 8.191446 TCATTGTTTTGTTTCGTTTCCTATTGA 58.809 29.630 0.00 0.00 0.00 2.57
4528 5394 8.346476 TCATTGTTTTGTTTCGTTTCCTATTG 57.654 30.769 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.