Multiple sequence alignment - TraesCS2A01G300600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G300600 chr2A 100.000 4233 0 0 1 4233 516110774 516115006 0.000000e+00 7817
1 TraesCS2A01G300600 chr2B 93.095 2013 108 18 1744 3749 452187876 452185888 0.000000e+00 2918
2 TraesCS2A01G300600 chr2B 94.661 768 37 3 984 1747 452188736 452187969 0.000000e+00 1188
3 TraesCS2A01G300600 chr2B 92.366 262 18 2 725 984 206286918 206287179 5.170000e-99 372
4 TraesCS2A01G300600 chr2B 80.056 356 39 20 137 473 452189404 452189062 7.080000e-58 235
5 TraesCS2A01G300600 chr2B 86.452 155 15 4 471 623 452189029 452188879 9.420000e-37 165
6 TraesCS2A01G300600 chr2D 88.404 1078 91 18 3083 4140 380711638 380710575 0.000000e+00 1267
7 TraesCS2A01G300600 chr2D 93.256 771 39 7 984 1747 380713352 380712588 0.000000e+00 1123
8 TraesCS2A01G300600 chr2D 89.126 892 36 23 1744 2598 380712499 380711632 0.000000e+00 1053
9 TraesCS2A01G300600 chr2D 84.582 467 67 5 2597 3060 638800160 638799696 3.860000e-125 459
10 TraesCS2A01G300600 chr2D 81.461 356 34 20 137 473 380714024 380713682 3.250000e-66 263
11 TraesCS2A01G300600 chr2D 88.387 155 16 2 471 623 380713649 380713495 7.230000e-43 185
12 TraesCS2A01G300600 chr1D 86.583 477 59 5 2598 3072 31025340 31024867 4.850000e-144 521
13 TraesCS2A01G300600 chr1D 84.760 479 64 6 2599 3069 352166523 352167000 4.950000e-129 472
14 TraesCS2A01G300600 chr1D 92.395 263 17 3 734 994 76971203 76970942 5.170000e-99 372
15 TraesCS2A01G300600 chr4D 86.307 482 58 7 2598 3072 302692024 302692504 6.270000e-143 518
16 TraesCS2A01G300600 chr4D 84.388 474 68 5 2599 3068 323374216 323374687 1.070000e-125 460
17 TraesCS2A01G300600 chr4D 92.748 262 16 3 725 984 3381351 3381091 4.000000e-100 375
18 TraesCS2A01G300600 chr4D 90.625 96 2 3 3883 3977 123734220 123734309 2.070000e-23 121
19 TraesCS2A01G300600 chr3D 86.996 446 46 9 2634 3069 93362056 93362499 3.800000e-135 492
20 TraesCS2A01G300600 chr6D 84.536 485 59 12 2601 3072 452502232 452501751 2.300000e-127 466
21 TraesCS2A01G300600 chr6D 89.899 99 3 3 3883 3980 184711100 184711008 2.070000e-23 121
22 TraesCS2A01G300600 chr7D 84.764 466 67 4 2598 3060 529959844 529960308 8.290000e-127 464
23 TraesCS2A01G300600 chr7D 90.625 96 2 3 3883 3977 381885033 381885122 2.070000e-23 121
24 TraesCS2A01G300600 chr4A 93.750 256 13 3 731 984 38673340 38673086 8.590000e-102 381
25 TraesCS2A01G300600 chr7B 92.164 268 14 6 725 985 618505929 618506196 5.170000e-99 372
26 TraesCS2A01G300600 chr7B 92.366 262 17 3 725 984 598296407 598296147 1.860000e-98 370
27 TraesCS2A01G300600 chr7B 90.625 96 2 3 3883 3977 716770380 716770469 2.070000e-23 121
28 TraesCS2A01G300600 chr6B 92.424 264 13 6 725 984 4952982 4953242 1.860000e-98 370
29 TraesCS2A01G300600 chr6B 92.424 264 13 6 725 984 4975364 4975624 1.860000e-98 370
30 TraesCS2A01G300600 chr3A 91.450 269 19 3 725 991 424089077 424088811 2.400000e-97 366
31 TraesCS2A01G300600 chr7A 90.909 99 2 3 3883 3980 708238163 708238071 4.440000e-25 126
32 TraesCS2A01G300600 chrUn 90.625 96 2 3 3883 3977 40079878 40079967 2.070000e-23 121
33 TraesCS2A01G300600 chrUn 89.899 99 3 3 3883 3980 223712527 223712435 2.070000e-23 121
34 TraesCS2A01G300600 chrUn 90.625 96 2 3 3883 3977 257858599 257858688 2.070000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G300600 chr2A 516110774 516115006 4232 False 7817.0 7817 100.0000 1 4233 1 chr2A.!!$F1 4232
1 TraesCS2A01G300600 chr2B 452185888 452189404 3516 True 1126.5 2918 88.5660 137 3749 4 chr2B.!!$R1 3612
2 TraesCS2A01G300600 chr2D 380710575 380714024 3449 True 778.2 1267 88.1268 137 4140 5 chr2D.!!$R2 4003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
183 184 0.322098 TTTCCCGCGTGTCATGGAAT 60.322 50.0 12.11 0.0 36.79 3.01 F
235 236 0.530650 CCATCTACGAACGCATGCCT 60.531 55.0 13.15 0.0 0.00 4.75 F
1161 1262 0.329596 AGTTGATTGGCAGGACTCCC 59.670 55.0 0.00 0.0 0.00 4.30 F
2830 3077 0.103937 CCAAAAGCAACGCCTCCAAA 59.896 50.0 0.00 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1003 1104 0.179004 TCGTTTGGACACCATTGCCT 60.179 50.0 0.00 0.00 31.53 4.75 R
1398 1502 0.813821 TGTCTGCCTCTCACTGATCG 59.186 55.0 0.00 0.00 0.00 3.69 R
2843 3090 0.032952 AGGCAACGACAACGCTTCTA 59.967 50.0 0.00 0.00 43.96 2.10 R
4072 4336 0.250081 TCCGCATGTAAGTGCACACA 60.250 50.0 21.04 16.02 45.30 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 7.737972 AATTTTAATTTGGGAAAAACTCCGG 57.262 32.000 0.00 0.00 46.51 5.14
47 48 6.481434 TTTTAATTTGGGAAAAACTCCGGA 57.519 33.333 2.93 2.93 46.51 5.14
48 49 5.456548 TTAATTTGGGAAAAACTCCGGAC 57.543 39.130 0.00 0.00 46.51 4.79
49 50 2.740506 TTTGGGAAAAACTCCGGACT 57.259 45.000 0.00 0.00 46.51 3.85
50 51 1.975660 TTGGGAAAAACTCCGGACTG 58.024 50.000 0.00 0.00 46.51 3.51
51 52 0.841289 TGGGAAAAACTCCGGACTGT 59.159 50.000 0.00 0.00 46.51 3.55
52 53 1.213430 TGGGAAAAACTCCGGACTGTT 59.787 47.619 0.00 0.52 46.51 3.16
53 54 2.438763 TGGGAAAAACTCCGGACTGTTA 59.561 45.455 9.31 0.00 46.51 2.41
54 55 2.810274 GGGAAAAACTCCGGACTGTTAC 59.190 50.000 9.31 0.00 46.51 2.50
55 56 3.469739 GGAAAAACTCCGGACTGTTACA 58.530 45.455 9.31 0.00 33.37 2.41
56 57 3.497262 GGAAAAACTCCGGACTGTTACAG 59.503 47.826 11.21 11.21 33.37 2.74
57 58 2.833631 AAACTCCGGACTGTTACAGG 57.166 50.000 17.21 0.00 35.51 4.00
58 59 2.005370 AACTCCGGACTGTTACAGGA 57.995 50.000 17.21 4.17 35.51 3.86
60 61 0.818296 CTCCGGACTGTTACAGGAGG 59.182 60.000 17.21 15.28 42.80 4.30
61 62 1.218316 CCGGACTGTTACAGGAGGC 59.782 63.158 17.21 3.13 35.51 4.70
62 63 1.541310 CCGGACTGTTACAGGAGGCA 61.541 60.000 17.21 0.00 35.51 4.75
63 64 0.537188 CGGACTGTTACAGGAGGCAT 59.463 55.000 17.21 0.00 35.51 4.40
64 65 1.754803 CGGACTGTTACAGGAGGCATA 59.245 52.381 17.21 0.00 35.51 3.14
65 66 2.365617 CGGACTGTTACAGGAGGCATAT 59.634 50.000 17.21 0.00 35.51 1.78
66 67 3.733337 GGACTGTTACAGGAGGCATATG 58.267 50.000 17.21 0.00 35.51 1.78
67 68 3.388024 GGACTGTTACAGGAGGCATATGA 59.612 47.826 17.21 0.00 35.51 2.15
68 69 4.502259 GGACTGTTACAGGAGGCATATGAG 60.502 50.000 17.21 0.00 35.51 2.90
69 70 3.389329 ACTGTTACAGGAGGCATATGAGG 59.611 47.826 17.21 0.00 35.51 3.86
70 71 2.705658 TGTTACAGGAGGCATATGAGGG 59.294 50.000 6.97 0.00 0.00 4.30
71 72 2.030027 TACAGGAGGCATATGAGGGG 57.970 55.000 6.97 0.00 0.00 4.79
72 73 1.377994 CAGGAGGCATATGAGGGGC 59.622 63.158 6.97 0.00 0.00 5.80
73 74 1.132554 CAGGAGGCATATGAGGGGCT 61.133 60.000 6.97 0.00 43.26 5.19
74 75 0.493639 AGGAGGCATATGAGGGGCTA 59.506 55.000 6.97 0.00 40.34 3.93
75 76 1.132397 AGGAGGCATATGAGGGGCTAA 60.132 52.381 6.97 0.00 40.34 3.09
76 77 1.705186 GGAGGCATATGAGGGGCTAAA 59.295 52.381 6.97 0.00 40.34 1.85
77 78 2.310052 GGAGGCATATGAGGGGCTAAAT 59.690 50.000 6.97 0.00 40.34 1.40
78 79 3.245407 GGAGGCATATGAGGGGCTAAATT 60.245 47.826 6.97 0.00 40.34 1.82
79 80 4.411013 GAGGCATATGAGGGGCTAAATTT 58.589 43.478 6.97 0.00 40.34 1.82
80 81 4.819610 AGGCATATGAGGGGCTAAATTTT 58.180 39.130 6.97 0.00 38.25 1.82
81 82 5.964288 AGGCATATGAGGGGCTAAATTTTA 58.036 37.500 6.97 0.00 38.25 1.52
82 83 6.381250 AGGCATATGAGGGGCTAAATTTTAA 58.619 36.000 6.97 0.00 38.25 1.52
83 84 6.494835 AGGCATATGAGGGGCTAAATTTTAAG 59.505 38.462 6.97 0.00 38.25 1.85
84 85 6.295292 GGCATATGAGGGGCTAAATTTTAAGG 60.295 42.308 6.97 0.00 0.00 2.69
85 86 6.691508 CATATGAGGGGCTAAATTTTAAGGC 58.308 40.000 0.00 6.07 37.55 4.35
86 87 4.331159 TGAGGGGCTAAATTTTAAGGCT 57.669 40.909 12.67 0.00 38.30 4.58
87 88 4.683643 TGAGGGGCTAAATTTTAAGGCTT 58.316 39.130 4.58 4.58 38.30 4.35
88 89 4.466015 TGAGGGGCTAAATTTTAAGGCTTG 59.534 41.667 10.69 0.00 38.30 4.01
89 90 3.774766 AGGGGCTAAATTTTAAGGCTTGG 59.225 43.478 10.69 0.00 38.30 3.61
90 91 3.118408 GGGGCTAAATTTTAAGGCTTGGG 60.118 47.826 10.69 0.00 38.30 4.12
91 92 3.531538 GGCTAAATTTTAAGGCTTGGGC 58.468 45.455 10.69 2.55 35.52 5.36
92 93 3.197766 GGCTAAATTTTAAGGCTTGGGCT 59.802 43.478 10.69 0.00 41.24 5.19
93 94 4.404394 GGCTAAATTTTAAGGCTTGGGCTA 59.596 41.667 10.69 0.00 37.50 3.93
94 95 5.451937 GGCTAAATTTTAAGGCTTGGGCTAG 60.452 44.000 10.69 4.57 37.50 3.42
95 96 5.359860 GCTAAATTTTAAGGCTTGGGCTAGA 59.640 40.000 10.69 0.00 37.50 2.43
96 97 5.921962 AAATTTTAAGGCTTGGGCTAGAG 57.078 39.130 10.69 0.00 37.50 2.43
97 98 4.862641 ATTTTAAGGCTTGGGCTAGAGA 57.137 40.909 10.69 0.00 37.50 3.10
98 99 4.862641 TTTTAAGGCTTGGGCTAGAGAT 57.137 40.909 10.69 0.00 37.50 2.75
99 100 5.968676 TTTTAAGGCTTGGGCTAGAGATA 57.031 39.130 10.69 0.00 37.50 1.98
100 101 4.957684 TTAAGGCTTGGGCTAGAGATAC 57.042 45.455 10.69 0.00 37.50 2.24
101 102 2.785357 AGGCTTGGGCTAGAGATACT 57.215 50.000 0.00 0.00 36.44 2.12
102 103 2.604139 AGGCTTGGGCTAGAGATACTC 58.396 52.381 0.00 0.00 36.44 2.59
103 104 2.178984 AGGCTTGGGCTAGAGATACTCT 59.821 50.000 6.53 6.53 38.63 3.24
104 105 2.969262 GGCTTGGGCTAGAGATACTCTT 59.031 50.000 6.60 0.00 36.68 2.85
105 106 4.140900 AGGCTTGGGCTAGAGATACTCTTA 60.141 45.833 6.60 0.00 36.68 2.10
106 107 4.219725 GGCTTGGGCTAGAGATACTCTTAG 59.780 50.000 6.60 4.41 36.68 2.18
107 108 5.074115 GCTTGGGCTAGAGATACTCTTAGA 58.926 45.833 6.60 0.00 41.50 2.10
108 109 5.183140 GCTTGGGCTAGAGATACTCTTAGAG 59.817 48.000 7.82 7.82 41.50 2.43
109 110 5.915744 TGGGCTAGAGATACTCTTAGAGT 57.084 43.478 19.35 19.35 45.54 3.24
110 111 6.268855 TGGGCTAGAGATACTCTTAGAGTT 57.731 41.667 20.59 8.33 40.28 3.01
111 112 6.065374 TGGGCTAGAGATACTCTTAGAGTTG 58.935 44.000 20.59 4.15 40.28 3.16
112 113 5.475564 GGGCTAGAGATACTCTTAGAGTTGG 59.524 48.000 20.59 5.18 40.28 3.77
113 114 5.475564 GGCTAGAGATACTCTTAGAGTTGGG 59.524 48.000 20.59 5.71 40.28 4.12
114 115 6.300703 GCTAGAGATACTCTTAGAGTTGGGA 58.699 44.000 20.59 2.42 40.28 4.37
115 116 6.773685 GCTAGAGATACTCTTAGAGTTGGGAA 59.226 42.308 20.59 2.01 40.28 3.97
116 117 7.040686 GCTAGAGATACTCTTAGAGTTGGGAAG 60.041 44.444 20.59 11.78 40.28 3.46
117 118 6.737608 AGAGATACTCTTAGAGTTGGGAAGT 58.262 40.000 20.59 0.00 40.28 3.01
118 119 7.874252 AGAGATACTCTTAGAGTTGGGAAGTA 58.126 38.462 20.59 0.00 40.28 2.24
119 120 8.337739 AGAGATACTCTTAGAGTTGGGAAGTAA 58.662 37.037 20.59 0.00 40.28 2.24
120 121 8.896722 AGATACTCTTAGAGTTGGGAAGTAAA 57.103 34.615 20.59 0.00 40.28 2.01
121 122 9.322769 AGATACTCTTAGAGTTGGGAAGTAAAA 57.677 33.333 20.59 0.00 40.28 1.52
122 123 9.368674 GATACTCTTAGAGTTGGGAAGTAAAAC 57.631 37.037 20.59 0.00 40.28 2.43
123 124 7.376335 ACTCTTAGAGTTGGGAAGTAAAACT 57.624 36.000 9.37 0.00 40.28 2.66
124 125 7.803131 ACTCTTAGAGTTGGGAAGTAAAACTT 58.197 34.615 9.37 0.00 40.28 2.66
125 126 7.715686 ACTCTTAGAGTTGGGAAGTAAAACTTG 59.284 37.037 9.37 0.00 40.28 3.16
126 127 6.996282 TCTTAGAGTTGGGAAGTAAAACTTGG 59.004 38.462 0.00 0.00 38.80 3.61
127 128 4.470602 AGAGTTGGGAAGTAAAACTTGGG 58.529 43.478 0.00 0.00 38.80 4.12
128 129 2.963101 AGTTGGGAAGTAAAACTTGGGC 59.037 45.455 0.00 0.00 38.80 5.36
129 130 2.003937 TGGGAAGTAAAACTTGGGCC 57.996 50.000 0.00 0.00 38.80 5.80
130 131 1.263356 GGGAAGTAAAACTTGGGCCC 58.737 55.000 17.59 17.59 38.80 5.80
131 132 1.481615 GGGAAGTAAAACTTGGGCCCA 60.482 52.381 24.45 24.45 38.80 5.36
132 133 1.893137 GGAAGTAAAACTTGGGCCCAG 59.107 52.381 26.87 21.02 38.80 4.45
133 134 2.594131 GAAGTAAAACTTGGGCCCAGT 58.406 47.619 26.87 21.71 38.80 4.00
134 135 3.499021 GGAAGTAAAACTTGGGCCCAGTA 60.499 47.826 26.87 10.84 38.80 2.74
135 136 3.887916 AGTAAAACTTGGGCCCAGTAA 57.112 42.857 26.87 9.96 0.00 2.24
136 137 4.397919 AGTAAAACTTGGGCCCAGTAAT 57.602 40.909 26.87 17.80 0.00 1.89
137 138 5.523883 AGTAAAACTTGGGCCCAGTAATA 57.476 39.130 26.87 16.90 0.00 0.98
138 139 5.894653 AGTAAAACTTGGGCCCAGTAATAA 58.105 37.500 26.87 8.19 0.00 1.40
139 140 6.316513 AGTAAAACTTGGGCCCAGTAATAAA 58.683 36.000 26.87 7.32 0.00 1.40
140 141 6.783482 AGTAAAACTTGGGCCCAGTAATAAAA 59.217 34.615 26.87 6.45 0.00 1.52
141 142 6.502074 AAAACTTGGGCCCAGTAATAAAAA 57.498 33.333 26.87 5.59 0.00 1.94
142 143 5.738619 AACTTGGGCCCAGTAATAAAAAG 57.261 39.130 26.87 18.41 0.00 2.27
169 170 3.665745 ATGTGAACTGTGCATTTTCCC 57.334 42.857 0.00 0.00 0.00 3.97
183 184 0.322098 TTTCCCGCGTGTCATGGAAT 60.322 50.000 12.11 0.00 36.79 3.01
186 187 0.655733 CCCGCGTGTCATGGAATTAC 59.344 55.000 4.92 0.00 0.00 1.89
191 192 3.309682 CGCGTGTCATGGAATTACTTGAT 59.690 43.478 9.32 0.00 0.00 2.57
192 193 4.201812 CGCGTGTCATGGAATTACTTGATT 60.202 41.667 9.32 0.00 0.00 2.57
204 205 6.624352 AATTACTTGATTCCATCCATGTCG 57.376 37.500 0.00 0.00 0.00 4.35
205 206 3.634397 ACTTGATTCCATCCATGTCGT 57.366 42.857 0.00 0.00 0.00 4.34
206 207 3.273434 ACTTGATTCCATCCATGTCGTG 58.727 45.455 0.00 0.00 0.00 4.35
207 208 3.055167 ACTTGATTCCATCCATGTCGTGA 60.055 43.478 0.00 0.00 0.00 4.35
208 209 3.625649 TGATTCCATCCATGTCGTGAA 57.374 42.857 0.00 0.00 0.00 3.18
209 210 3.270027 TGATTCCATCCATGTCGTGAAC 58.730 45.455 0.00 0.00 0.00 3.18
227 228 2.915738 ACTCGTCACCATCTACGAAC 57.084 50.000 0.00 0.00 46.43 3.95
235 236 0.530650 CCATCTACGAACGCATGCCT 60.531 55.000 13.15 0.00 0.00 4.75
237 238 2.469826 CATCTACGAACGCATGCCTTA 58.530 47.619 13.15 0.00 0.00 2.69
239 240 0.570734 CTACGAACGCATGCCTTACG 59.429 55.000 13.15 14.78 0.00 3.18
240 241 0.802994 TACGAACGCATGCCTTACGG 60.803 55.000 13.15 0.00 0.00 4.02
267 271 3.711086 GTCATCGTCAGTATCAGCACAT 58.289 45.455 0.00 0.00 0.00 3.21
268 272 4.554723 CGTCATCGTCAGTATCAGCACATA 60.555 45.833 0.00 0.00 0.00 2.29
283 287 4.749598 CAGCACATATTGTAACTATCGGCA 59.250 41.667 0.00 0.00 0.00 5.69
317 321 2.159240 AGCTCGATCGATGTGCTAAACA 60.159 45.455 23.94 0.00 44.79 2.83
322 326 4.092821 TCGATCGATGTGCTAAACAAAAGG 59.907 41.667 15.15 0.00 43.61 3.11
324 328 4.742438 TCGATGTGCTAAACAAAAGGTC 57.258 40.909 0.00 0.00 43.61 3.85
330 334 3.883489 GTGCTAAACAAAAGGTCAGGAGT 59.117 43.478 0.00 0.00 0.00 3.85
332 336 5.529800 GTGCTAAACAAAAGGTCAGGAGTAA 59.470 40.000 0.00 0.00 0.00 2.24
366 386 5.057843 ACACAATGAGATATTGGGCATCT 57.942 39.130 2.02 0.00 35.93 2.90
398 418 7.859377 CGCATAATCCAATAAGATATGCCATTC 59.141 37.037 9.67 0.00 33.92 2.67
402 422 4.696877 TCCAATAAGATATGCCATTCGCTG 59.303 41.667 0.00 0.00 38.78 5.18
431 451 4.219070 TGCATTATAAATCTCTGCATGGGC 59.781 41.667 6.59 0.00 37.88 5.36
445 465 2.202479 GGGCGCGTCATTTGCTTC 60.202 61.111 14.93 0.00 0.00 3.86
469 489 0.942252 AAAGTTTCGAGCCGTGGAAC 59.058 50.000 0.00 0.00 0.00 3.62
473 528 2.444700 TTTCGAGCCGTGGAACTCCC 62.445 60.000 0.00 0.00 34.29 4.30
509 564 1.555477 CGTTGTGAGTGCCCAAAAAC 58.445 50.000 0.00 0.00 0.00 2.43
519 574 2.952310 GTGCCCAAAAACTCTCTGTTCT 59.048 45.455 0.00 0.00 38.03 3.01
522 577 4.578928 TGCCCAAAAACTCTCTGTTCTTAC 59.421 41.667 0.00 0.00 38.03 2.34
527 582 6.293135 CCAAAAACTCTCTGTTCTTACTCAGC 60.293 42.308 0.00 0.00 38.03 4.26
531 586 5.719173 ACTCTCTGTTCTTACTCAGCAATC 58.281 41.667 0.00 0.00 0.00 2.67
533 588 6.661377 ACTCTCTGTTCTTACTCAGCAATCTA 59.339 38.462 0.00 0.00 0.00 1.98
540 597 4.406003 TCTTACTCAGCAATCTAACCCTCC 59.594 45.833 0.00 0.00 0.00 4.30
549 606 4.310769 CAATCTAACCCTCCATTAGCTCG 58.689 47.826 0.00 0.00 30.95 5.03
561 618 2.586258 TTAGCTCGGTTCATCTCAGC 57.414 50.000 0.00 0.00 0.00 4.26
564 621 1.086634 GCTCGGTTCATCTCAGCCAC 61.087 60.000 0.00 0.00 0.00 5.01
569 626 2.093973 CGGTTCATCTCAGCCACTAGTT 60.094 50.000 0.00 0.00 0.00 2.24
571 628 4.327680 GGTTCATCTCAGCCACTAGTTTT 58.672 43.478 0.00 0.00 0.00 2.43
576 633 6.166279 TCATCTCAGCCACTAGTTTTGTTAG 58.834 40.000 0.00 0.00 0.00 2.34
581 638 8.154856 TCTCAGCCACTAGTTTTGTTAGTTAAT 58.845 33.333 0.00 0.00 0.00 1.40
582 639 9.431887 CTCAGCCACTAGTTTTGTTAGTTAATA 57.568 33.333 0.00 0.00 0.00 0.98
583 640 9.781633 TCAGCCACTAGTTTTGTTAGTTAATAA 57.218 29.630 0.00 0.00 0.00 1.40
617 678 2.445145 TGGAATCCTTGGACTCAAACCA 59.555 45.455 0.00 0.00 35.47 3.67
623 684 4.457466 TCCTTGGACTCAAACCAGTTAAC 58.543 43.478 0.00 0.00 38.70 2.01
624 685 4.165372 TCCTTGGACTCAAACCAGTTAACT 59.835 41.667 1.12 1.12 38.70 2.24
625 686 4.275936 CCTTGGACTCAAACCAGTTAACTG 59.724 45.833 25.79 25.79 38.70 3.16
626 687 4.764050 TGGACTCAAACCAGTTAACTGA 57.236 40.909 32.50 14.48 46.59 3.41
627 688 5.304686 TGGACTCAAACCAGTTAACTGAT 57.695 39.130 32.50 17.32 46.59 2.90
628 689 5.305585 TGGACTCAAACCAGTTAACTGATC 58.694 41.667 32.50 17.71 46.59 2.92
631 692 4.010349 CTCAAACCAGTTAACTGATCCCC 58.990 47.826 32.50 0.00 46.59 4.81
632 693 3.655777 TCAAACCAGTTAACTGATCCCCT 59.344 43.478 32.50 10.94 46.59 4.79
633 694 4.010349 CAAACCAGTTAACTGATCCCCTC 58.990 47.826 32.50 0.00 46.59 4.30
634 695 2.915869 ACCAGTTAACTGATCCCCTCA 58.084 47.619 32.50 0.00 46.59 3.86
635 696 3.256704 ACCAGTTAACTGATCCCCTCAA 58.743 45.455 32.50 0.00 46.59 3.02
637 698 4.105697 ACCAGTTAACTGATCCCCTCAAAA 59.894 41.667 32.50 0.00 46.59 2.44
638 699 5.076873 CCAGTTAACTGATCCCCTCAAAAA 58.923 41.667 32.50 0.00 46.59 1.94
671 772 8.137437 CCAGTTAACTGAATGTTTTGATCAAGT 58.863 33.333 32.50 0.00 46.59 3.16
676 777 8.955061 AACTGAATGTTTTGATCAAGTTATCG 57.045 30.769 8.41 5.02 34.84 2.92
680 781 9.430623 TGAATGTTTTGATCAAGTTATCGTAGA 57.569 29.630 8.41 0.00 45.75 2.59
703 804 1.546923 TGATCAACTTTGCATGGCTGG 59.453 47.619 0.00 0.00 0.00 4.85
710 811 0.966875 TTTGCATGGCTGGCGAAGAT 60.967 50.000 0.00 0.00 31.26 2.40
730 831 7.876896 AAGATCTCGTCTTCTTTTTACTCAC 57.123 36.000 0.00 0.00 43.74 3.51
731 832 7.222000 AGATCTCGTCTTCTTTTTACTCACT 57.778 36.000 0.00 0.00 31.47 3.41
732 833 7.662897 AGATCTCGTCTTCTTTTTACTCACTT 58.337 34.615 0.00 0.00 31.47 3.16
733 834 7.810759 AGATCTCGTCTTCTTTTTACTCACTTC 59.189 37.037 0.00 0.00 31.47 3.01
734 835 5.913514 TCTCGTCTTCTTTTTACTCACTTCG 59.086 40.000 0.00 0.00 0.00 3.79
735 836 5.585390 TCGTCTTCTTTTTACTCACTTCGT 58.415 37.500 0.00 0.00 0.00 3.85
736 837 6.038356 TCGTCTTCTTTTTACTCACTTCGTT 58.962 36.000 0.00 0.00 0.00 3.85
737 838 6.532657 TCGTCTTCTTTTTACTCACTTCGTTT 59.467 34.615 0.00 0.00 0.00 3.60
738 839 6.839796 CGTCTTCTTTTTACTCACTTCGTTTC 59.160 38.462 0.00 0.00 0.00 2.78
739 840 7.254017 CGTCTTCTTTTTACTCACTTCGTTTCT 60.254 37.037 0.00 0.00 0.00 2.52
740 841 8.388853 GTCTTCTTTTTACTCACTTCGTTTCTT 58.611 33.333 0.00 0.00 0.00 2.52
741 842 8.943002 TCTTCTTTTTACTCACTTCGTTTCTTT 58.057 29.630 0.00 0.00 0.00 2.52
742 843 9.556030 CTTCTTTTTACTCACTTCGTTTCTTTT 57.444 29.630 0.00 0.00 0.00 2.27
743 844 9.902196 TTCTTTTTACTCACTTCGTTTCTTTTT 57.098 25.926 0.00 0.00 0.00 1.94
748 849 9.977762 TTTACTCACTTCGTTTCTTTTTAGTTC 57.022 29.630 0.00 0.00 0.00 3.01
749 850 6.702897 ACTCACTTCGTTTCTTTTTAGTTCG 58.297 36.000 0.00 0.00 0.00 3.95
750 851 5.495502 TCACTTCGTTTCTTTTTAGTTCGC 58.504 37.500 0.00 0.00 0.00 4.70
751 852 4.371948 CACTTCGTTTCTTTTTAGTTCGCG 59.628 41.667 0.00 0.00 0.00 5.87
752 853 4.033243 ACTTCGTTTCTTTTTAGTTCGCGT 59.967 37.500 5.77 0.00 0.00 6.01
753 854 5.231991 ACTTCGTTTCTTTTTAGTTCGCGTA 59.768 36.000 5.77 0.00 0.00 4.42
754 855 5.827568 TCGTTTCTTTTTAGTTCGCGTAT 57.172 34.783 5.77 0.00 0.00 3.06
755 856 6.926280 TCGTTTCTTTTTAGTTCGCGTATA 57.074 33.333 5.77 0.00 0.00 1.47
756 857 7.332003 TCGTTTCTTTTTAGTTCGCGTATAA 57.668 32.000 5.77 0.93 0.00 0.98
757 858 7.439490 TCGTTTCTTTTTAGTTCGCGTATAAG 58.561 34.615 5.77 2.08 0.00 1.73
758 859 7.325821 TCGTTTCTTTTTAGTTCGCGTATAAGA 59.674 33.333 5.77 4.43 0.00 2.10
759 860 8.106348 CGTTTCTTTTTAGTTCGCGTATAAGAT 58.894 33.333 5.77 0.00 0.00 2.40
760 861 9.750882 GTTTCTTTTTAGTTCGCGTATAAGATT 57.249 29.630 5.77 0.00 0.00 2.40
762 863 9.749490 TTCTTTTTAGTTCGCGTATAAGATTTG 57.251 29.630 5.77 0.00 0.00 2.32
763 864 8.385111 TCTTTTTAGTTCGCGTATAAGATTTGG 58.615 33.333 5.77 0.00 0.00 3.28
764 865 7.599630 TTTTAGTTCGCGTATAAGATTTGGT 57.400 32.000 5.77 0.00 0.00 3.67
765 866 6.817270 TTAGTTCGCGTATAAGATTTGGTC 57.183 37.500 5.77 0.00 0.00 4.02
766 867 4.751060 AGTTCGCGTATAAGATTTGGTCA 58.249 39.130 5.77 0.00 0.00 4.02
767 868 5.172934 AGTTCGCGTATAAGATTTGGTCAA 58.827 37.500 5.77 0.00 0.00 3.18
768 869 5.640357 AGTTCGCGTATAAGATTTGGTCAAA 59.360 36.000 5.77 0.00 34.46 2.69
769 870 5.712217 TCGCGTATAAGATTTGGTCAAAG 57.288 39.130 5.77 0.00 33.32 2.77
770 871 5.172934 TCGCGTATAAGATTTGGTCAAAGT 58.827 37.500 5.77 0.00 33.32 2.66
771 872 5.290158 TCGCGTATAAGATTTGGTCAAAGTC 59.710 40.000 5.77 1.51 33.32 3.01
772 873 5.062934 CGCGTATAAGATTTGGTCAAAGTCA 59.937 40.000 0.00 0.00 33.32 3.41
773 874 6.401688 CGCGTATAAGATTTGGTCAAAGTCAA 60.402 38.462 0.00 0.00 33.32 3.18
774 875 7.302524 GCGTATAAGATTTGGTCAAAGTCAAA 58.697 34.615 2.55 0.00 37.29 2.69
775 876 7.270579 GCGTATAAGATTTGGTCAAAGTCAAAC 59.729 37.037 2.55 0.00 35.97 2.93
776 877 8.504005 CGTATAAGATTTGGTCAAAGTCAAACT 58.496 33.333 2.55 0.00 35.97 2.66
933 1034 6.505044 AAACTCCGTCAAAGTTAACAAAGT 57.495 33.333 8.61 0.00 35.96 2.66
934 1035 6.505044 AACTCCGTCAAAGTTAACAAAGTT 57.495 33.333 8.61 2.97 35.25 2.66
935 1036 6.505044 ACTCCGTCAAAGTTAACAAAGTTT 57.495 33.333 8.61 0.00 0.00 2.66
936 1037 6.319399 ACTCCGTCAAAGTTAACAAAGTTTG 58.681 36.000 14.13 14.13 41.87 2.93
937 1038 6.149807 ACTCCGTCAAAGTTAACAAAGTTTGA 59.850 34.615 22.23 13.70 44.97 2.69
961 1062 9.617523 TGACTTTGATCAAATCTTATATGCAGA 57.382 29.630 20.76 0.00 0.00 4.26
962 1063 9.875675 GACTTTGATCAAATCTTATATGCAGAC 57.124 33.333 20.76 2.27 0.00 3.51
963 1064 9.624373 ACTTTGATCAAATCTTATATGCAGACT 57.376 29.630 20.76 0.00 0.00 3.24
975 1076 8.879759 TCTTATATGCAGACTAAAAAGAAACGG 58.120 33.333 0.00 0.00 0.00 4.44
976 1077 8.780846 TTATATGCAGACTAAAAAGAAACGGA 57.219 30.769 0.00 0.00 0.00 4.69
977 1078 5.613358 ATGCAGACTAAAAAGAAACGGAG 57.387 39.130 0.00 0.00 0.00 4.63
978 1079 3.813166 TGCAGACTAAAAAGAAACGGAGG 59.187 43.478 0.00 0.00 0.00 4.30
979 1080 3.188667 GCAGACTAAAAAGAAACGGAGGG 59.811 47.826 0.00 0.00 0.00 4.30
980 1081 4.638304 CAGACTAAAAAGAAACGGAGGGA 58.362 43.478 0.00 0.00 0.00 4.20
981 1082 4.691216 CAGACTAAAAAGAAACGGAGGGAG 59.309 45.833 0.00 0.00 0.00 4.30
982 1083 4.347292 AGACTAAAAAGAAACGGAGGGAGT 59.653 41.667 0.00 0.00 0.00 3.85
1019 1120 2.299582 CAATGAGGCAATGGTGTCCAAA 59.700 45.455 0.00 0.00 36.95 3.28
1046 1147 2.190981 GATCGCGAAAGATGTAACCGT 58.809 47.619 15.24 0.00 0.00 4.83
1057 1158 6.743575 AAGATGTAACCGTAGTACGTAACT 57.256 37.500 20.60 7.67 40.58 2.24
1065 1166 4.331168 ACCGTAGTACGTAACTAGCTCTTG 59.669 45.833 20.60 3.91 41.42 3.02
1069 1170 6.473778 CGTAGTACGTAACTAGCTCTTGTCTA 59.526 42.308 14.62 0.00 41.42 2.59
1074 1175 5.240183 ACGTAACTAGCTCTTGTCTACACAA 59.760 40.000 0.00 0.00 40.40 3.33
1091 1192 3.005684 ACACAACCACATACATTTGCAGG 59.994 43.478 0.00 0.00 0.00 4.85
1113 1214 3.065233 GTCACCTGCGATGCAAATTATGA 59.935 43.478 0.00 0.00 38.41 2.15
1161 1262 0.329596 AGTTGATTGGCAGGACTCCC 59.670 55.000 0.00 0.00 0.00 4.30
1309 1413 7.015292 TGGATTATCAGTGGTACAGATAGTTCC 59.985 40.741 0.00 12.94 41.80 3.62
1323 1427 4.532521 AGATAGTTCCGGGGATAATCTTGG 59.467 45.833 0.00 0.00 0.00 3.61
1351 1455 4.201657 CAGGATTGGTTACAGCATGATCA 58.798 43.478 0.00 0.00 39.69 2.92
1398 1502 0.955919 CTCCAGGAAAGGTGAACGCC 60.956 60.000 0.00 0.00 0.00 5.68
1422 1534 0.760567 AGTGAGAGGCAGACACCACA 60.761 55.000 0.00 0.00 35.47 4.17
1423 1535 0.601311 GTGAGAGGCAGACACCACAC 60.601 60.000 0.00 0.00 0.00 3.82
1424 1536 1.373497 GAGAGGCAGACACCACACG 60.373 63.158 0.00 0.00 0.00 4.49
1425 1537 2.088674 GAGAGGCAGACACCACACGT 62.089 60.000 0.00 0.00 0.00 4.49
1456 1571 7.328737 ACGTAGATTATCGTCAAAATCATAGCC 59.671 37.037 0.00 0.00 35.30 3.93
1486 1601 4.963276 TGTTCTTGGTTTTCAGAGTGTG 57.037 40.909 0.00 0.00 0.00 3.82
1825 2036 3.480133 GTGGCCGGCATAGGGACT 61.480 66.667 30.85 0.00 46.37 3.85
1879 2090 5.259632 CTCAAGGAGATGAACCCTGAAATT 58.740 41.667 0.00 0.00 32.12 1.82
1941 2152 9.374838 GATTTTCTTTCTCCATTTACAATGCAT 57.625 29.630 0.00 0.00 0.00 3.96
2057 2283 9.232473 ACCTGGTGAGATAAGTAATTTTCTTTC 57.768 33.333 0.00 0.00 0.00 2.62
2207 2448 3.936564 AGATGAAGTCTTCCAAGTGAGC 58.063 45.455 10.12 0.00 31.47 4.26
2387 2634 1.110442 TGTGAGCAAACAAACCCCAG 58.890 50.000 0.00 0.00 0.00 4.45
2394 2641 3.070015 AGCAAACAAACCCCAGAATTCAG 59.930 43.478 8.44 0.00 0.00 3.02
2452 2699 2.028930 TCTCTTTCTCGAAGCCTGGTTC 60.029 50.000 0.00 0.00 35.24 3.62
2493 2740 0.459899 TTCAGGTCGGGATGTCATCG 59.540 55.000 6.74 0.00 0.00 3.84
2580 2827 3.118775 TCGTAAGTGCCGTACTACCTCTA 60.119 47.826 0.00 0.00 39.18 2.43
2652 2899 8.276252 TCAAAAAGATACTAATTACACCCAGC 57.724 34.615 0.00 0.00 0.00 4.85
2653 2900 7.338449 TCAAAAAGATACTAATTACACCCAGCC 59.662 37.037 0.00 0.00 0.00 4.85
2654 2901 6.576778 AAAGATACTAATTACACCCAGCCT 57.423 37.500 0.00 0.00 0.00 4.58
2655 2902 5.810080 AGATACTAATTACACCCAGCCTC 57.190 43.478 0.00 0.00 0.00 4.70
2656 2903 5.468658 AGATACTAATTACACCCAGCCTCT 58.531 41.667 0.00 0.00 0.00 3.69
2657 2904 6.621394 AGATACTAATTACACCCAGCCTCTA 58.379 40.000 0.00 0.00 0.00 2.43
2658 2905 6.494146 AGATACTAATTACACCCAGCCTCTAC 59.506 42.308 0.00 0.00 0.00 2.59
2659 2906 4.359105 ACTAATTACACCCAGCCTCTACA 58.641 43.478 0.00 0.00 0.00 2.74
2660 2907 3.629142 AATTACACCCAGCCTCTACAC 57.371 47.619 0.00 0.00 0.00 2.90
2661 2908 1.272807 TTACACCCAGCCTCTACACC 58.727 55.000 0.00 0.00 0.00 4.16
2662 2909 0.968901 TACACCCAGCCTCTACACCG 60.969 60.000 0.00 0.00 0.00 4.94
2669 2916 1.478510 CAGCCTCTACACCGACAAGAT 59.521 52.381 0.00 0.00 0.00 2.40
2670 2917 2.688446 CAGCCTCTACACCGACAAGATA 59.312 50.000 0.00 0.00 0.00 1.98
2671 2918 3.319405 CAGCCTCTACACCGACAAGATAT 59.681 47.826 0.00 0.00 0.00 1.63
2696 2943 3.928727 AAACATTCAGGATGCACACAG 57.071 42.857 0.00 0.00 39.47 3.66
2698 2945 2.430465 ACATTCAGGATGCACACAGAC 58.570 47.619 0.00 0.00 39.47 3.51
2703 2950 3.286353 TCAGGATGCACACAGACAAAAA 58.714 40.909 0.00 0.00 34.76 1.94
2762 3009 0.108186 TCAATCACCCGCAGTAGCAG 60.108 55.000 0.00 0.00 42.27 4.24
2766 3013 4.394712 ACCCGCAGTAGCAGCACC 62.395 66.667 0.00 0.00 42.27 5.01
2777 3024 1.000896 GCAGCACCCTAACCACCAT 60.001 57.895 0.00 0.00 0.00 3.55
2786 3033 3.333680 ACCCTAACCACCATCAAAGACAT 59.666 43.478 0.00 0.00 0.00 3.06
2805 3052 5.186797 AGACATCACCTGGACTAGAAAGAAG 59.813 44.000 0.00 0.00 0.00 2.85
2806 3053 5.087323 ACATCACCTGGACTAGAAAGAAGA 58.913 41.667 0.00 0.00 0.00 2.87
2822 3069 4.756084 AGAAGATTCTCCAAAAGCAACG 57.244 40.909 0.00 0.00 29.94 4.10
2823 3070 2.997485 AGATTCTCCAAAAGCAACGC 57.003 45.000 0.00 0.00 0.00 4.84
2824 3071 1.541588 AGATTCTCCAAAAGCAACGCC 59.458 47.619 0.00 0.00 0.00 5.68
2828 3075 1.152860 TCCAAAAGCAACGCCTCCA 60.153 52.632 0.00 0.00 0.00 3.86
2829 3076 0.753479 TCCAAAAGCAACGCCTCCAA 60.753 50.000 0.00 0.00 0.00 3.53
2830 3077 0.103937 CCAAAAGCAACGCCTCCAAA 59.896 50.000 0.00 0.00 0.00 3.28
2862 3109 0.032952 TAGAAGCGTTGTCGTTGCCT 59.967 50.000 0.00 0.00 39.49 4.75
2865 3112 0.884704 AAGCGTTGTCGTTGCCTGAT 60.885 50.000 0.00 0.00 39.49 2.90
2874 3121 2.029728 GTCGTTGCCTGATCAAAGATCG 59.970 50.000 0.00 0.09 36.96 3.69
2889 3136 3.889520 AGATCGTAGGTTTTCACCCTC 57.110 47.619 0.00 0.00 45.63 4.30
2890 3137 2.165845 AGATCGTAGGTTTTCACCCTCG 59.834 50.000 0.00 0.00 45.63 4.63
2906 3153 0.708918 CTCGAGAAAGACCGCGTTTC 59.291 55.000 6.58 9.02 34.64 2.78
2955 3202 2.687370 CCAGGCACAACCAATAAAAGC 58.313 47.619 0.00 0.00 43.14 3.51
2959 3206 2.612721 GGCACAACCAATAAAAGCCAGG 60.613 50.000 0.00 0.00 40.29 4.45
2960 3207 2.037121 GCACAACCAATAAAAGCCAGGT 59.963 45.455 0.00 0.00 0.00 4.00
2961 3208 3.652274 CACAACCAATAAAAGCCAGGTG 58.348 45.455 0.00 0.00 31.86 4.00
2964 3211 4.896482 ACAACCAATAAAAGCCAGGTGTTA 59.104 37.500 0.00 0.00 31.86 2.41
2967 3214 5.144832 ACCAATAAAAGCCAGGTGTTAAGT 58.855 37.500 0.00 0.00 0.00 2.24
2973 3220 5.869649 AAAGCCAGGTGTTAAGTTTTCAT 57.130 34.783 0.00 0.00 0.00 2.57
3001 3248 2.983402 TCACGTCTCGGTACTCAAAG 57.017 50.000 0.00 0.00 0.00 2.77
3094 3341 5.641209 GTGCTTCATCAGATTGTCTACTTGT 59.359 40.000 0.00 0.00 0.00 3.16
3101 3348 5.680619 TCAGATTGTCTACTTGTTGTGGTT 58.319 37.500 0.00 0.00 0.00 3.67
3118 3365 2.159544 TGGTTTCGTTTTTCACCGTGTC 60.160 45.455 0.00 0.00 31.24 3.67
3187 3435 3.366171 GCTACCTCTCGTCGTTTCTCTTT 60.366 47.826 0.00 0.00 0.00 2.52
3196 3444 4.216902 TCGTCGTTTCTCTTTGAGTCCATA 59.783 41.667 0.00 0.00 0.00 2.74
3253 3501 3.885484 ACGCTGACTTCTCATGTTTTG 57.115 42.857 0.00 0.00 0.00 2.44
3273 3522 3.103742 TGGGAAAAAGTTCAGGCACTTT 58.896 40.909 0.00 0.00 46.85 2.66
3284 3534 3.407698 TCAGGCACTTTGCTATTTTCGA 58.592 40.909 0.00 0.00 44.28 3.71
3379 3629 9.019656 ACTTTGGCACATACAGTTTCAATAATA 57.980 29.630 0.00 0.00 39.30 0.98
3444 3694 9.289303 GCTATTATTGGTGTTGATTTTACACAG 57.711 33.333 8.22 0.00 45.95 3.66
3525 3776 6.313519 TCTAGGTCCAATTCAGCATTTAGT 57.686 37.500 0.00 0.00 0.00 2.24
3559 3810 3.541242 TTTTCCATGGGTCCATCAACT 57.459 42.857 13.02 0.00 33.90 3.16
3587 3850 7.565680 AGATCAAACCGAGGACTTATAATTGT 58.434 34.615 0.00 0.00 0.00 2.71
3742 4006 9.528018 TTGGAGCTTTTAGTTGTTTCATTAAAG 57.472 29.630 0.00 0.00 0.00 1.85
3812 4076 8.385491 TGGACCATAAATGTATCTAGCATTGAT 58.615 33.333 0.00 0.00 36.75 2.57
3821 4085 9.941325 AATGTATCTAGCATTGATCTAGGAAAG 57.059 33.333 0.00 0.00 35.49 2.62
3825 4089 7.283625 TCTAGCATTGATCTAGGAAAGTCTC 57.716 40.000 0.00 0.00 35.43 3.36
3827 4091 6.305272 AGCATTGATCTAGGAAAGTCTCAA 57.695 37.500 0.00 0.00 34.64 3.02
3855 4119 2.771943 TGGGCTAGAGGTTTGGTAGATG 59.228 50.000 0.00 0.00 0.00 2.90
3858 4122 4.192317 GGCTAGAGGTTTGGTAGATGTTG 58.808 47.826 0.00 0.00 0.00 3.33
3889 4153 4.251268 AGTTAGACCGTTCAATAAGGTGC 58.749 43.478 0.00 0.00 38.57 5.01
3890 4154 2.851263 AGACCGTTCAATAAGGTGCA 57.149 45.000 0.00 0.00 38.57 4.57
3891 4155 2.699954 AGACCGTTCAATAAGGTGCAG 58.300 47.619 0.00 0.00 38.57 4.41
3894 4158 1.135689 CCGTTCAATAAGGTGCAGTGC 60.136 52.381 8.58 8.58 0.00 4.40
3925 4189 6.375377 CCGCTCTAAGAAGTATGACTATGAC 58.625 44.000 0.00 0.00 0.00 3.06
3927 4191 7.295201 CGCTCTAAGAAGTATGACTATGACTC 58.705 42.308 0.00 0.00 0.00 3.36
3943 4207 3.620488 TGACTCTGATTTGCCAATACCC 58.380 45.455 0.00 0.00 0.00 3.69
3987 4251 4.281182 GCTCCCCTTCTTCATACTAATCGA 59.719 45.833 0.00 0.00 0.00 3.59
4005 4269 8.017946 ACTAATCGAAGAAAATTTCTGCTCAAC 58.982 33.333 9.21 0.00 43.58 3.18
4008 4272 6.201517 TCGAAGAAAATTTCTGCTCAACTTG 58.798 36.000 9.21 0.00 40.59 3.16
4024 4288 1.003696 ACTTGGCAAAGGTCTAGGAGC 59.996 52.381 5.66 0.00 37.76 4.70
4033 4297 5.755861 GCAAAGGTCTAGGAGCTATTAACAG 59.244 44.000 0.00 0.00 39.62 3.16
4034 4298 6.630638 GCAAAGGTCTAGGAGCTATTAACAGT 60.631 42.308 0.00 0.00 39.62 3.55
4036 4300 6.472686 AGGTCTAGGAGCTATTAACAGTTG 57.527 41.667 0.00 0.00 38.70 3.16
4055 4319 3.847671 TGTAGTTGGTGGTTGATGTGA 57.152 42.857 0.00 0.00 0.00 3.58
4057 4321 3.135712 TGTAGTTGGTGGTTGATGTGACT 59.864 43.478 0.00 0.00 0.00 3.41
4058 4322 2.575532 AGTTGGTGGTTGATGTGACTG 58.424 47.619 0.00 0.00 0.00 3.51
4064 4328 3.243401 GGTGGTTGATGTGACTGGTTTTC 60.243 47.826 0.00 0.00 0.00 2.29
4072 4336 3.030291 TGTGACTGGTTTTCTTTGCCAT 58.970 40.909 0.00 0.00 0.00 4.40
4102 4367 2.044053 ATGCGGAACCCACCCATG 60.044 61.111 0.00 0.00 0.00 3.66
4123 4388 6.927936 CCATGAAAAATCACAACAACATACCA 59.072 34.615 0.00 0.00 0.00 3.25
4140 4405 5.944007 ACATACCAAAACACTGGATTAGACC 59.056 40.000 0.00 0.00 38.96 3.85
4141 4406 4.724279 ACCAAAACACTGGATTAGACCT 57.276 40.909 0.00 0.00 38.96 3.85
4142 4407 5.836024 ACCAAAACACTGGATTAGACCTA 57.164 39.130 0.00 0.00 38.96 3.08
4143 4408 5.805728 ACCAAAACACTGGATTAGACCTAG 58.194 41.667 0.00 0.00 38.96 3.02
4144 4409 4.636206 CCAAAACACTGGATTAGACCTAGC 59.364 45.833 0.00 0.00 38.96 3.42
4145 4410 5.245531 CAAAACACTGGATTAGACCTAGCA 58.754 41.667 0.00 0.00 0.00 3.49
4146 4411 4.744795 AACACTGGATTAGACCTAGCAG 57.255 45.455 0.00 0.00 0.00 4.24
4147 4412 2.432510 ACACTGGATTAGACCTAGCAGC 59.567 50.000 0.00 0.00 0.00 5.25
4148 4413 2.432146 CACTGGATTAGACCTAGCAGCA 59.568 50.000 0.00 0.00 0.00 4.41
4149 4414 3.107601 ACTGGATTAGACCTAGCAGCAA 58.892 45.455 0.00 0.00 0.00 3.91
4150 4415 3.713764 ACTGGATTAGACCTAGCAGCAAT 59.286 43.478 0.00 0.00 0.00 3.56
4151 4416 4.063689 CTGGATTAGACCTAGCAGCAATG 58.936 47.826 0.00 0.00 0.00 2.82
4152 4417 3.181451 TGGATTAGACCTAGCAGCAATGG 60.181 47.826 0.00 0.00 0.00 3.16
4153 4418 3.071602 GGATTAGACCTAGCAGCAATGGA 59.928 47.826 0.00 0.00 0.00 3.41
4154 4419 4.263243 GGATTAGACCTAGCAGCAATGGAT 60.263 45.833 0.00 0.00 0.00 3.41
4155 4420 4.778213 TTAGACCTAGCAGCAATGGATT 57.222 40.909 0.00 0.00 0.00 3.01
4156 4421 5.887214 TTAGACCTAGCAGCAATGGATTA 57.113 39.130 0.00 0.00 0.00 1.75
4157 4422 4.078639 AGACCTAGCAGCAATGGATTAC 57.921 45.455 0.00 0.00 0.00 1.89
4158 4423 3.455910 AGACCTAGCAGCAATGGATTACA 59.544 43.478 0.00 0.00 0.00 2.41
4159 4424 3.545703 ACCTAGCAGCAATGGATTACAC 58.454 45.455 0.00 0.00 0.00 2.90
4160 4425 2.880890 CCTAGCAGCAATGGATTACACC 59.119 50.000 0.00 0.00 0.00 4.16
4161 4426 2.512692 AGCAGCAATGGATTACACCA 57.487 45.000 0.00 0.00 44.41 4.17
4162 4427 2.806434 AGCAGCAATGGATTACACCAA 58.194 42.857 0.00 0.00 43.47 3.67
4163 4428 3.368248 AGCAGCAATGGATTACACCAAT 58.632 40.909 0.00 0.00 43.47 3.16
4164 4429 4.535781 AGCAGCAATGGATTACACCAATA 58.464 39.130 0.00 0.00 43.47 1.90
4165 4430 5.142639 AGCAGCAATGGATTACACCAATAT 58.857 37.500 0.00 0.00 43.47 1.28
4166 4431 5.010314 AGCAGCAATGGATTACACCAATATG 59.990 40.000 0.00 0.00 43.47 1.78
4167 4432 5.221303 GCAGCAATGGATTACACCAATATGT 60.221 40.000 0.00 0.00 43.47 2.29
4168 4433 6.210796 CAGCAATGGATTACACCAATATGTG 58.789 40.000 0.00 0.00 43.47 3.21
4183 4448 7.800155 CCAATATGTGGTATTATGTGTGACA 57.200 36.000 0.00 0.00 43.20 3.58
4184 4449 8.219546 CCAATATGTGGTATTATGTGTGACAA 57.780 34.615 0.00 0.00 43.20 3.18
4185 4450 8.681806 CCAATATGTGGTATTATGTGTGACAAA 58.318 33.333 0.00 0.00 43.20 2.83
4186 4451 9.502145 CAATATGTGGTATTATGTGTGACAAAC 57.498 33.333 0.00 0.00 31.78 2.93
4187 4452 5.950758 TGTGGTATTATGTGTGACAAACC 57.049 39.130 0.00 0.00 0.00 3.27
4188 4453 4.762765 TGTGGTATTATGTGTGACAAACCC 59.237 41.667 0.00 0.00 0.00 4.11
4189 4454 4.004314 TGGTATTATGTGTGACAAACCCG 58.996 43.478 0.00 0.00 0.00 5.28
4190 4455 4.004982 GGTATTATGTGTGACAAACCCGT 58.995 43.478 0.00 0.00 0.00 5.28
4191 4456 5.177326 GGTATTATGTGTGACAAACCCGTA 58.823 41.667 0.00 0.00 0.00 4.02
4192 4457 5.292589 GGTATTATGTGTGACAAACCCGTAG 59.707 44.000 0.00 0.00 0.00 3.51
4193 4458 4.603989 TTATGTGTGACAAACCCGTAGA 57.396 40.909 0.00 0.00 0.00 2.59
4194 4459 2.519377 TGTGTGACAAACCCGTAGAG 57.481 50.000 0.00 0.00 0.00 2.43
4195 4460 1.758280 TGTGTGACAAACCCGTAGAGT 59.242 47.619 0.00 0.00 0.00 3.24
4196 4461 2.957680 TGTGTGACAAACCCGTAGAGTA 59.042 45.455 0.00 0.00 0.00 2.59
4197 4462 3.384146 TGTGTGACAAACCCGTAGAGTAA 59.616 43.478 0.00 0.00 0.00 2.24
4198 4463 3.985925 GTGTGACAAACCCGTAGAGTAAG 59.014 47.826 0.00 0.00 0.00 2.34
4199 4464 3.638160 TGTGACAAACCCGTAGAGTAAGT 59.362 43.478 0.00 0.00 0.00 2.24
4200 4465 3.985925 GTGACAAACCCGTAGAGTAAGTG 59.014 47.826 0.00 0.00 0.00 3.16
4201 4466 2.991866 GACAAACCCGTAGAGTAAGTGC 59.008 50.000 0.00 0.00 0.00 4.40
4202 4467 2.631545 ACAAACCCGTAGAGTAAGTGCT 59.368 45.455 0.00 0.00 0.00 4.40
4203 4468 3.251571 CAAACCCGTAGAGTAAGTGCTC 58.748 50.000 0.00 0.00 35.82 4.26
4204 4469 2.510928 ACCCGTAGAGTAAGTGCTCT 57.489 50.000 4.30 4.30 46.49 4.09
4205 4470 3.641434 ACCCGTAGAGTAAGTGCTCTA 57.359 47.619 2.38 2.38 43.39 2.43
4206 4471 4.167652 ACCCGTAGAGTAAGTGCTCTAT 57.832 45.455 9.03 0.00 46.11 1.98
4207 4472 5.301835 ACCCGTAGAGTAAGTGCTCTATA 57.698 43.478 9.03 0.00 46.11 1.31
4208 4473 5.878627 ACCCGTAGAGTAAGTGCTCTATAT 58.121 41.667 9.03 0.00 46.11 0.86
4209 4474 7.013823 ACCCGTAGAGTAAGTGCTCTATATA 57.986 40.000 9.03 0.00 46.11 0.86
4210 4475 7.631933 ACCCGTAGAGTAAGTGCTCTATATAT 58.368 38.462 9.03 0.00 46.11 0.86
4211 4476 7.553402 ACCCGTAGAGTAAGTGCTCTATATATG 59.447 40.741 9.03 0.00 46.11 1.78
4212 4477 7.553402 CCCGTAGAGTAAGTGCTCTATATATGT 59.447 40.741 9.03 0.00 46.11 2.29
4213 4478 9.597170 CCGTAGAGTAAGTGCTCTATATATGTA 57.403 37.037 9.03 0.00 46.11 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.274206 CCGGAGTTTTTCCCAAATTAAAATTAA 57.726 29.630 0.00 0.00 43.63 1.40
21 22 8.648693 TCCGGAGTTTTTCCCAAATTAAAATTA 58.351 29.630 0.00 0.00 43.63 1.40
22 23 7.442969 GTCCGGAGTTTTTCCCAAATTAAAATT 59.557 33.333 3.06 0.00 43.63 1.82
23 24 6.932400 GTCCGGAGTTTTTCCCAAATTAAAAT 59.068 34.615 3.06 0.00 43.63 1.82
24 25 6.098552 AGTCCGGAGTTTTTCCCAAATTAAAA 59.901 34.615 3.06 0.00 43.63 1.52
25 26 5.599242 AGTCCGGAGTTTTTCCCAAATTAAA 59.401 36.000 3.06 0.00 43.63 1.52
26 27 5.010213 CAGTCCGGAGTTTTTCCCAAATTAA 59.990 40.000 9.74 0.00 43.63 1.40
27 28 4.521256 CAGTCCGGAGTTTTTCCCAAATTA 59.479 41.667 9.74 0.00 43.63 1.40
28 29 3.320826 CAGTCCGGAGTTTTTCCCAAATT 59.679 43.478 9.74 0.00 43.63 1.82
29 30 2.890945 CAGTCCGGAGTTTTTCCCAAAT 59.109 45.455 9.74 0.00 43.63 2.32
30 31 2.303175 CAGTCCGGAGTTTTTCCCAAA 58.697 47.619 9.74 0.00 43.63 3.28
31 32 1.213430 ACAGTCCGGAGTTTTTCCCAA 59.787 47.619 9.74 0.00 43.63 4.12
32 33 0.841289 ACAGTCCGGAGTTTTTCCCA 59.159 50.000 9.74 0.00 43.63 4.37
33 34 1.977056 AACAGTCCGGAGTTTTTCCC 58.023 50.000 9.74 0.00 43.63 3.97
34 35 3.469739 TGTAACAGTCCGGAGTTTTTCC 58.530 45.455 15.59 8.00 43.04 3.13
35 36 3.497262 CCTGTAACAGTCCGGAGTTTTTC 59.503 47.826 15.59 11.29 0.00 2.29
36 37 3.135167 TCCTGTAACAGTCCGGAGTTTTT 59.865 43.478 15.59 11.34 0.00 1.94
37 38 2.701951 TCCTGTAACAGTCCGGAGTTTT 59.298 45.455 9.74 12.75 0.00 2.43
38 39 2.299297 CTCCTGTAACAGTCCGGAGTTT 59.701 50.000 9.74 10.12 37.17 2.66
39 40 1.893801 CTCCTGTAACAGTCCGGAGTT 59.106 52.381 9.74 11.76 37.17 3.01
40 41 1.546961 CTCCTGTAACAGTCCGGAGT 58.453 55.000 3.06 4.57 37.17 3.85
41 42 0.818296 CCTCCTGTAACAGTCCGGAG 59.182 60.000 3.06 0.00 40.68 4.63
42 43 1.255667 GCCTCCTGTAACAGTCCGGA 61.256 60.000 0.00 0.00 0.00 5.14
43 44 1.218316 GCCTCCTGTAACAGTCCGG 59.782 63.158 0.00 0.00 0.00 5.14
44 45 0.537188 ATGCCTCCTGTAACAGTCCG 59.463 55.000 0.00 0.00 0.00 4.79
45 46 3.388024 TCATATGCCTCCTGTAACAGTCC 59.612 47.826 0.00 0.00 0.00 3.85
46 47 4.502259 CCTCATATGCCTCCTGTAACAGTC 60.502 50.000 0.00 0.00 0.00 3.51
47 48 3.389329 CCTCATATGCCTCCTGTAACAGT 59.611 47.826 0.00 0.00 0.00 3.55
48 49 3.244353 CCCTCATATGCCTCCTGTAACAG 60.244 52.174 0.00 0.00 0.00 3.16
49 50 2.705658 CCCTCATATGCCTCCTGTAACA 59.294 50.000 0.00 0.00 0.00 2.41
50 51 2.039084 CCCCTCATATGCCTCCTGTAAC 59.961 54.545 0.00 0.00 0.00 2.50
51 52 2.338809 CCCCTCATATGCCTCCTGTAA 58.661 52.381 0.00 0.00 0.00 2.41
52 53 2.030027 CCCCTCATATGCCTCCTGTA 57.970 55.000 0.00 0.00 0.00 2.74
53 54 1.422161 GCCCCTCATATGCCTCCTGT 61.422 60.000 0.00 0.00 0.00 4.00
54 55 1.132554 AGCCCCTCATATGCCTCCTG 61.133 60.000 0.00 0.00 0.00 3.86
55 56 0.493639 TAGCCCCTCATATGCCTCCT 59.506 55.000 0.00 0.00 0.00 3.69
56 57 1.362224 TTAGCCCCTCATATGCCTCC 58.638 55.000 0.00 0.00 0.00 4.30
57 58 3.728385 ATTTAGCCCCTCATATGCCTC 57.272 47.619 0.00 0.00 0.00 4.70
58 59 4.475919 AAATTTAGCCCCTCATATGCCT 57.524 40.909 0.00 0.00 0.00 4.75
59 60 6.295292 CCTTAAAATTTAGCCCCTCATATGCC 60.295 42.308 0.00 0.00 0.00 4.40
60 61 6.691508 CCTTAAAATTTAGCCCCTCATATGC 58.308 40.000 0.00 0.00 0.00 3.14
61 62 6.494835 AGCCTTAAAATTTAGCCCCTCATATG 59.505 38.462 0.00 0.00 0.00 1.78
62 63 6.624297 AGCCTTAAAATTTAGCCCCTCATAT 58.376 36.000 0.00 0.00 0.00 1.78
63 64 6.025793 AGCCTTAAAATTTAGCCCCTCATA 57.974 37.500 0.00 0.00 0.00 2.15
64 65 4.883759 AGCCTTAAAATTTAGCCCCTCAT 58.116 39.130 0.00 0.00 0.00 2.90
65 66 4.331159 AGCCTTAAAATTTAGCCCCTCA 57.669 40.909 0.00 0.00 0.00 3.86
66 67 4.141937 CCAAGCCTTAAAATTTAGCCCCTC 60.142 45.833 0.00 0.00 0.00 4.30
67 68 3.774766 CCAAGCCTTAAAATTTAGCCCCT 59.225 43.478 0.00 0.00 0.00 4.79
68 69 3.118408 CCCAAGCCTTAAAATTTAGCCCC 60.118 47.826 0.00 0.00 0.00 5.80
69 70 3.681594 GCCCAAGCCTTAAAATTTAGCCC 60.682 47.826 0.00 0.00 0.00 5.19
70 71 3.197766 AGCCCAAGCCTTAAAATTTAGCC 59.802 43.478 0.00 0.00 41.25 3.93
71 72 4.471904 AGCCCAAGCCTTAAAATTTAGC 57.528 40.909 0.00 0.00 41.25 3.09
72 73 6.828785 TCTCTAGCCCAAGCCTTAAAATTTAG 59.171 38.462 0.00 0.00 41.25 1.85
73 74 6.727394 TCTCTAGCCCAAGCCTTAAAATTTA 58.273 36.000 0.00 0.00 41.25 1.40
74 75 5.580022 TCTCTAGCCCAAGCCTTAAAATTT 58.420 37.500 0.00 0.00 41.25 1.82
75 76 5.193099 TCTCTAGCCCAAGCCTTAAAATT 57.807 39.130 0.00 0.00 41.25 1.82
76 77 4.862641 TCTCTAGCCCAAGCCTTAAAAT 57.137 40.909 0.00 0.00 41.25 1.82
77 78 4.862641 ATCTCTAGCCCAAGCCTTAAAA 57.137 40.909 0.00 0.00 41.25 1.52
78 79 4.969359 AGTATCTCTAGCCCAAGCCTTAAA 59.031 41.667 0.00 0.00 41.25 1.52
79 80 4.557705 AGTATCTCTAGCCCAAGCCTTAA 58.442 43.478 0.00 0.00 41.25 1.85
80 81 4.153411 GAGTATCTCTAGCCCAAGCCTTA 58.847 47.826 0.00 0.00 41.25 2.69
81 82 2.969262 GAGTATCTCTAGCCCAAGCCTT 59.031 50.000 0.00 0.00 41.25 4.35
82 83 2.604139 GAGTATCTCTAGCCCAAGCCT 58.396 52.381 0.00 0.00 41.25 4.58
96 97 9.368674 GTTTTACTTCCCAACTCTAAGAGTATC 57.631 37.037 0.00 0.00 42.59 2.24
97 98 9.102453 AGTTTTACTTCCCAACTCTAAGAGTAT 57.898 33.333 0.00 0.00 42.59 2.12
98 99 8.488308 AGTTTTACTTCCCAACTCTAAGAGTA 57.512 34.615 0.00 0.00 42.59 2.59
99 100 7.376335 AGTTTTACTTCCCAACTCTAAGAGT 57.624 36.000 0.00 0.00 45.64 3.24
100 101 7.173390 CCAAGTTTTACTTCCCAACTCTAAGAG 59.827 40.741 0.00 0.00 36.03 2.85
101 102 6.996282 CCAAGTTTTACTTCCCAACTCTAAGA 59.004 38.462 0.00 0.00 36.03 2.10
102 103 6.206829 CCCAAGTTTTACTTCCCAACTCTAAG 59.793 42.308 0.00 0.00 36.03 2.18
103 104 6.066032 CCCAAGTTTTACTTCCCAACTCTAA 58.934 40.000 0.00 0.00 36.03 2.10
104 105 5.627135 CCCAAGTTTTACTTCCCAACTCTA 58.373 41.667 0.00 0.00 36.03 2.43
105 106 4.470602 CCCAAGTTTTACTTCCCAACTCT 58.529 43.478 0.00 0.00 36.03 3.24
106 107 3.005472 GCCCAAGTTTTACTTCCCAACTC 59.995 47.826 0.00 0.00 36.03 3.01
107 108 2.963101 GCCCAAGTTTTACTTCCCAACT 59.037 45.455 0.00 0.00 36.03 3.16
108 109 2.036733 GGCCCAAGTTTTACTTCCCAAC 59.963 50.000 0.00 0.00 36.03 3.77
109 110 2.321719 GGCCCAAGTTTTACTTCCCAA 58.678 47.619 0.00 0.00 36.03 4.12
110 111 1.481615 GGGCCCAAGTTTTACTTCCCA 60.482 52.381 19.95 0.00 38.78 4.37
111 112 1.263356 GGGCCCAAGTTTTACTTCCC 58.737 55.000 19.95 0.00 36.03 3.97
112 113 1.893137 CTGGGCCCAAGTTTTACTTCC 59.107 52.381 28.29 0.00 36.03 3.46
113 114 2.594131 ACTGGGCCCAAGTTTTACTTC 58.406 47.619 28.29 0.00 36.03 3.01
114 115 2.767644 ACTGGGCCCAAGTTTTACTT 57.232 45.000 28.29 0.00 39.39 2.24
115 116 3.887916 TTACTGGGCCCAAGTTTTACT 57.112 42.857 28.29 5.56 0.00 2.24
116 117 6.593268 TTTATTACTGGGCCCAAGTTTTAC 57.407 37.500 28.29 0.00 0.00 2.01
117 118 7.290481 ACTTTTTATTACTGGGCCCAAGTTTTA 59.710 33.333 28.29 16.17 0.00 1.52
118 119 6.100569 ACTTTTTATTACTGGGCCCAAGTTTT 59.899 34.615 28.29 17.06 0.00 2.43
119 120 5.605069 ACTTTTTATTACTGGGCCCAAGTTT 59.395 36.000 28.29 17.37 0.00 2.66
120 121 5.152193 ACTTTTTATTACTGGGCCCAAGTT 58.848 37.500 28.29 15.68 0.00 2.66
121 122 4.747583 ACTTTTTATTACTGGGCCCAAGT 58.252 39.130 28.29 25.93 0.00 3.16
122 123 6.844097 TTACTTTTTATTACTGGGCCCAAG 57.156 37.500 28.29 21.62 0.00 3.61
123 124 7.613551 TTTTACTTTTTATTACTGGGCCCAA 57.386 32.000 28.29 12.38 0.00 4.12
124 125 7.613551 TTTTTACTTTTTATTACTGGGCCCA 57.386 32.000 26.67 26.67 0.00 5.36
150 151 1.336440 CGGGAAAATGCACAGTTCACA 59.664 47.619 8.38 0.00 0.00 3.58
156 157 1.442520 CACGCGGGAAAATGCACAG 60.443 57.895 12.47 0.00 0.00 3.66
159 160 1.240641 ATGACACGCGGGAAAATGCA 61.241 50.000 19.19 3.09 0.00 3.96
160 161 0.798009 CATGACACGCGGGAAAATGC 60.798 55.000 19.19 0.00 0.00 3.56
164 165 0.322098 ATTCCATGACACGCGGGAAA 60.322 50.000 19.19 1.71 42.26 3.13
167 168 0.655733 GTAATTCCATGACACGCGGG 59.344 55.000 6.92 6.92 0.00 6.13
169 170 2.670905 TCAAGTAATTCCATGACACGCG 59.329 45.455 3.53 3.53 0.00 6.01
191 192 2.673893 CGAGTTCACGACATGGATGGAA 60.674 50.000 0.00 0.00 35.09 3.53
192 193 1.135112 CGAGTTCACGACATGGATGGA 60.135 52.381 0.00 0.00 35.09 3.41
195 196 1.544246 TGACGAGTTCACGACATGGAT 59.456 47.619 0.00 0.00 33.89 3.41
196 197 0.955905 TGACGAGTTCACGACATGGA 59.044 50.000 0.00 0.00 33.89 3.41
205 206 2.429478 TCGTAGATGGTGACGAGTTCA 58.571 47.619 0.00 0.00 42.80 3.18
218 219 2.470821 GTAAGGCATGCGTTCGTAGAT 58.529 47.619 27.42 6.32 35.04 1.98
219 220 1.796253 CGTAAGGCATGCGTTCGTAGA 60.796 52.381 27.42 8.59 31.96 2.59
240 241 2.679132 ATACTGACGATGACGCCGGC 62.679 60.000 19.07 19.07 43.96 6.13
241 242 0.660595 GATACTGACGATGACGCCGG 60.661 60.000 0.00 0.00 43.96 6.13
242 243 0.028902 TGATACTGACGATGACGCCG 59.971 55.000 0.00 0.00 43.96 6.46
243 244 1.759994 CTGATACTGACGATGACGCC 58.240 55.000 0.00 0.00 43.96 5.68
247 248 5.712152 ATATGTGCTGATACTGACGATGA 57.288 39.130 0.00 0.00 0.00 2.92
254 255 8.854312 CGATAGTTACAATATGTGCTGATACTG 58.146 37.037 0.00 0.00 0.00 2.74
267 271 5.775686 ACGCTATTGCCGATAGTTACAATA 58.224 37.500 1.01 0.00 39.98 1.90
268 272 4.628074 ACGCTATTGCCGATAGTTACAAT 58.372 39.130 1.01 0.00 39.98 2.71
283 287 2.933495 TCGAGCTGTACAACGCTATT 57.067 45.000 9.41 0.00 36.45 1.73
317 321 4.262506 CCTTCTCGTTACTCCTGACCTTTT 60.263 45.833 0.00 0.00 0.00 2.27
322 326 1.467713 CGCCTTCTCGTTACTCCTGAC 60.468 57.143 0.00 0.00 0.00 3.51
324 328 0.809385 TCGCCTTCTCGTTACTCCTG 59.191 55.000 0.00 0.00 0.00 3.86
330 334 2.512485 TTGTGTTCGCCTTCTCGTTA 57.488 45.000 0.00 0.00 0.00 3.18
332 336 1.148310 CATTGTGTTCGCCTTCTCGT 58.852 50.000 0.00 0.00 0.00 4.18
366 386 9.101655 CATATCTTATTGGATTATGCGTGATGA 57.898 33.333 0.00 0.00 0.00 2.92
398 418 7.322938 CAGAGATTTATAATGCAAATCACAGCG 59.677 37.037 9.99 0.00 42.37 5.18
431 451 0.039617 TTTGGGAAGCAAATGACGCG 60.040 50.000 3.53 3.53 0.00 6.01
445 465 0.666374 ACGGCTCGAAACTTTTTGGG 59.334 50.000 1.50 0.00 0.00 4.12
509 564 5.964758 AGATTGCTGAGTAAGAACAGAGAG 58.035 41.667 0.00 0.00 36.38 3.20
519 574 4.101114 TGGAGGGTTAGATTGCTGAGTAA 58.899 43.478 0.00 0.00 0.00 2.24
522 577 3.853355 ATGGAGGGTTAGATTGCTGAG 57.147 47.619 0.00 0.00 0.00 3.35
527 582 4.310769 CGAGCTAATGGAGGGTTAGATTG 58.689 47.826 0.00 0.00 32.20 2.67
531 586 2.040178 ACCGAGCTAATGGAGGGTTAG 58.960 52.381 6.15 0.00 33.36 2.34
533 588 1.209747 GAACCGAGCTAATGGAGGGTT 59.790 52.381 6.15 2.60 40.25 4.11
540 597 2.799412 GCTGAGATGAACCGAGCTAATG 59.201 50.000 0.00 0.00 0.00 1.90
549 606 3.618690 AACTAGTGGCTGAGATGAACC 57.381 47.619 0.00 0.00 0.00 3.62
581 638 7.040062 CCAAGGATTCCACAAAATGTGTACTTA 60.040 37.037 5.29 0.00 46.45 2.24
582 639 6.239289 CCAAGGATTCCACAAAATGTGTACTT 60.239 38.462 5.29 1.37 46.45 2.24
583 640 5.243730 CCAAGGATTCCACAAAATGTGTACT 59.756 40.000 5.29 0.00 46.45 2.73
584 641 5.242838 TCCAAGGATTCCACAAAATGTGTAC 59.757 40.000 5.29 0.00 46.45 2.90
635 696 8.840833 ACATTCAGTTAACTGGTTTTGTTTTT 57.159 26.923 30.35 8.62 43.91 1.94
637 698 8.840833 AAACATTCAGTTAACTGGTTTTGTTT 57.159 26.923 30.35 29.43 43.91 2.83
638 699 8.716909 CAAAACATTCAGTTAACTGGTTTTGTT 58.283 29.630 36.79 31.10 45.51 2.83
639 700 8.250538 CAAAACATTCAGTTAACTGGTTTTGT 57.749 30.769 36.79 29.06 45.51 2.83
641 702 9.313118 GATCAAAACATTCAGTTAACTGGTTTT 57.687 29.630 29.19 29.19 41.75 2.43
642 703 8.474025 TGATCAAAACATTCAGTTAACTGGTTT 58.526 29.630 30.35 26.79 43.91 3.27
645 706 8.137437 ACTTGATCAAAACATTCAGTTAACTGG 58.863 33.333 30.35 19.13 43.91 4.00
646 707 9.520204 AACTTGATCAAAACATTCAGTTAACTG 57.480 29.630 26.60 26.60 45.08 3.16
659 760 8.922676 TCACTTCTACGATAACTTGATCAAAAC 58.077 33.333 9.88 0.00 0.00 2.43
671 772 6.871492 TGCAAAGTTGATCACTTCTACGATAA 59.129 34.615 0.00 0.00 45.77 1.75
676 777 5.634896 CCATGCAAAGTTGATCACTTCTAC 58.365 41.667 0.00 0.00 45.77 2.59
710 811 5.913514 CGAAGTGAGTAAAAAGAAGACGAGA 59.086 40.000 0.00 0.00 0.00 4.04
715 816 8.488651 AAGAAACGAAGTGAGTAAAAAGAAGA 57.511 30.769 0.00 0.00 45.00 2.87
724 825 7.515684 GCGAACTAAAAAGAAACGAAGTGAGTA 60.516 37.037 0.00 0.00 45.00 2.59
725 826 6.702897 CGAACTAAAAAGAAACGAAGTGAGT 58.297 36.000 0.00 0.00 45.00 3.41
726 827 5.615982 GCGAACTAAAAAGAAACGAAGTGAG 59.384 40.000 0.00 0.00 45.00 3.51
727 828 5.495502 GCGAACTAAAAAGAAACGAAGTGA 58.504 37.500 0.00 0.00 45.00 3.41
728 829 4.371948 CGCGAACTAAAAAGAAACGAAGTG 59.628 41.667 0.00 0.00 45.00 3.16
730 831 4.511734 ACGCGAACTAAAAAGAAACGAAG 58.488 39.130 15.93 0.00 0.00 3.79
731 832 4.519191 ACGCGAACTAAAAAGAAACGAA 57.481 36.364 15.93 0.00 0.00 3.85
732 833 5.827568 ATACGCGAACTAAAAAGAAACGA 57.172 34.783 15.93 0.00 0.00 3.85
733 834 7.439490 TCTTATACGCGAACTAAAAAGAAACG 58.561 34.615 15.93 0.00 0.00 3.60
734 835 9.750882 AATCTTATACGCGAACTAAAAAGAAAC 57.249 29.630 15.93 0.00 0.00 2.78
736 837 9.749490 CAAATCTTATACGCGAACTAAAAAGAA 57.251 29.630 15.93 0.00 0.00 2.52
737 838 8.385111 CCAAATCTTATACGCGAACTAAAAAGA 58.615 33.333 15.93 11.65 0.00 2.52
738 839 8.173130 ACCAAATCTTATACGCGAACTAAAAAG 58.827 33.333 15.93 6.45 0.00 2.27
739 840 8.031848 ACCAAATCTTATACGCGAACTAAAAA 57.968 30.769 15.93 0.00 0.00 1.94
740 841 7.331440 TGACCAAATCTTATACGCGAACTAAAA 59.669 33.333 15.93 0.00 0.00 1.52
741 842 6.812656 TGACCAAATCTTATACGCGAACTAAA 59.187 34.615 15.93 0.00 0.00 1.85
742 843 6.331845 TGACCAAATCTTATACGCGAACTAA 58.668 36.000 15.93 6.36 0.00 2.24
743 844 5.893687 TGACCAAATCTTATACGCGAACTA 58.106 37.500 15.93 0.00 0.00 2.24
744 845 4.751060 TGACCAAATCTTATACGCGAACT 58.249 39.130 15.93 0.00 0.00 3.01
745 846 5.459110 TTGACCAAATCTTATACGCGAAC 57.541 39.130 15.93 0.00 0.00 3.95
746 847 5.640357 ACTTTGACCAAATCTTATACGCGAA 59.360 36.000 15.93 0.00 0.00 4.70
747 848 5.172934 ACTTTGACCAAATCTTATACGCGA 58.827 37.500 15.93 0.00 0.00 5.87
748 849 5.062934 TGACTTTGACCAAATCTTATACGCG 59.937 40.000 3.53 3.53 0.00 6.01
749 850 6.417191 TGACTTTGACCAAATCTTATACGC 57.583 37.500 0.00 0.00 0.00 4.42
750 851 8.504005 AGTTTGACTTTGACCAAATCTTATACG 58.496 33.333 0.00 0.00 35.14 3.06
913 1014 6.468000 GTCAAACTTTGTTAACTTTGACGGAG 59.532 38.462 23.88 8.49 41.37 4.63
914 1015 6.316319 GTCAAACTTTGTTAACTTTGACGGA 58.684 36.000 23.88 8.06 41.37 4.69
915 1016 6.548931 GTCAAACTTTGTTAACTTTGACGG 57.451 37.500 23.88 6.32 41.37 4.79
935 1036 9.617523 TCTGCATATAAGATTTGATCAAAGTCA 57.382 29.630 24.17 11.02 33.32 3.41
936 1037 9.875675 GTCTGCATATAAGATTTGATCAAAGTC 57.124 33.333 24.17 19.70 33.32 3.01
937 1038 9.624373 AGTCTGCATATAAGATTTGATCAAAGT 57.376 29.630 24.17 14.86 33.32 2.66
949 1050 8.879759 CCGTTTCTTTTTAGTCTGCATATAAGA 58.120 33.333 0.00 0.00 0.00 2.10
950 1051 8.879759 TCCGTTTCTTTTTAGTCTGCATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
951 1052 8.780846 TCCGTTTCTTTTTAGTCTGCATATAA 57.219 30.769 0.00 0.00 0.00 0.98
952 1053 7.494625 CCTCCGTTTCTTTTTAGTCTGCATATA 59.505 37.037 0.00 0.00 0.00 0.86
953 1054 6.316390 CCTCCGTTTCTTTTTAGTCTGCATAT 59.684 38.462 0.00 0.00 0.00 1.78
954 1055 5.642063 CCTCCGTTTCTTTTTAGTCTGCATA 59.358 40.000 0.00 0.00 0.00 3.14
955 1056 4.455877 CCTCCGTTTCTTTTTAGTCTGCAT 59.544 41.667 0.00 0.00 0.00 3.96
956 1057 3.813166 CCTCCGTTTCTTTTTAGTCTGCA 59.187 43.478 0.00 0.00 0.00 4.41
957 1058 3.188667 CCCTCCGTTTCTTTTTAGTCTGC 59.811 47.826 0.00 0.00 0.00 4.26
958 1059 4.638304 TCCCTCCGTTTCTTTTTAGTCTG 58.362 43.478 0.00 0.00 0.00 3.51
959 1060 4.347292 ACTCCCTCCGTTTCTTTTTAGTCT 59.653 41.667 0.00 0.00 0.00 3.24
960 1061 4.639334 ACTCCCTCCGTTTCTTTTTAGTC 58.361 43.478 0.00 0.00 0.00 2.59
961 1062 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
962 1063 6.034161 TCTACTCCCTCCGTTTCTTTTTAG 57.966 41.667 0.00 0.00 0.00 1.85
963 1064 6.211986 TGATCTACTCCCTCCGTTTCTTTTTA 59.788 38.462 0.00 0.00 0.00 1.52
964 1065 4.968971 TCTACTCCCTCCGTTTCTTTTT 57.031 40.909 0.00 0.00 0.00 1.94
965 1066 4.530946 TGATCTACTCCCTCCGTTTCTTTT 59.469 41.667 0.00 0.00 0.00 2.27
966 1067 4.081586 GTGATCTACTCCCTCCGTTTCTTT 60.082 45.833 0.00 0.00 0.00 2.52
967 1068 3.447944 GTGATCTACTCCCTCCGTTTCTT 59.552 47.826 0.00 0.00 0.00 2.52
968 1069 3.025262 GTGATCTACTCCCTCCGTTTCT 58.975 50.000 0.00 0.00 0.00 2.52
969 1070 2.758979 TGTGATCTACTCCCTCCGTTTC 59.241 50.000 0.00 0.00 0.00 2.78
970 1071 2.816411 TGTGATCTACTCCCTCCGTTT 58.184 47.619 0.00 0.00 0.00 3.60
971 1072 2.526888 TGTGATCTACTCCCTCCGTT 57.473 50.000 0.00 0.00 0.00 4.44
972 1073 2.379972 CTTGTGATCTACTCCCTCCGT 58.620 52.381 0.00 0.00 0.00 4.69
973 1074 1.683917 CCTTGTGATCTACTCCCTCCG 59.316 57.143 0.00 0.00 0.00 4.63
974 1075 2.432510 CACCTTGTGATCTACTCCCTCC 59.567 54.545 0.00 0.00 35.23 4.30
975 1076 3.366396 TCACCTTGTGATCTACTCCCTC 58.634 50.000 0.00 0.00 37.67 4.30
976 1077 3.370104 CTCACCTTGTGATCTACTCCCT 58.630 50.000 0.00 0.00 41.94 4.20
977 1078 2.159028 GCTCACCTTGTGATCTACTCCC 60.159 54.545 0.00 0.00 41.94 4.30
978 1079 2.497675 TGCTCACCTTGTGATCTACTCC 59.502 50.000 0.00 0.00 41.94 3.85
979 1080 3.876274 TGCTCACCTTGTGATCTACTC 57.124 47.619 0.00 0.00 41.94 2.59
980 1081 4.223700 TCATTGCTCACCTTGTGATCTACT 59.776 41.667 0.00 0.00 41.94 2.57
981 1082 4.507710 TCATTGCTCACCTTGTGATCTAC 58.492 43.478 0.00 0.00 41.94 2.59
982 1083 4.383444 CCTCATTGCTCACCTTGTGATCTA 60.383 45.833 0.00 0.00 41.94 1.98
1003 1104 0.179004 TCGTTTGGACACCATTGCCT 60.179 50.000 0.00 0.00 31.53 4.75
1046 1147 7.276658 GTGTAGACAAGAGCTAGTTACGTACTA 59.723 40.741 0.00 0.00 38.33 1.82
1057 1158 3.639561 TGTGGTTGTGTAGACAAGAGCTA 59.360 43.478 5.55 0.00 42.87 3.32
1065 1166 5.049060 TGCAAATGTATGTGGTTGTGTAGAC 60.049 40.000 0.00 0.00 0.00 2.59
1069 1170 3.005684 CCTGCAAATGTATGTGGTTGTGT 59.994 43.478 0.00 0.00 0.00 3.72
1074 1175 2.819608 GTGACCTGCAAATGTATGTGGT 59.180 45.455 0.00 0.00 33.96 4.16
1091 1192 3.065233 TCATAATTTGCATCGCAGGTGAC 59.935 43.478 0.00 0.00 40.61 3.67
1102 1203 6.127563 ACAGAATCAGCATGTCATAATTTGCA 60.128 34.615 0.00 0.00 37.56 4.08
1113 1214 4.095483 GGATCGAAAACAGAATCAGCATGT 59.905 41.667 0.00 0.00 37.40 3.21
1161 1262 2.185004 CCTTGTTCAGGTACACCAGG 57.815 55.000 0.38 0.00 37.99 4.45
1236 1337 7.130099 TGACTTACCTATCCTTGATACTGGAA 58.870 38.462 0.00 0.00 35.81 3.53
1309 1413 2.757868 TGCAAAACCAAGATTATCCCCG 59.242 45.455 0.00 0.00 0.00 5.73
1323 1427 3.243704 TGCTGTAACCAATCCTGCAAAAC 60.244 43.478 0.00 0.00 31.39 2.43
1351 1455 2.344203 CCTTCTCCTCTGCGTCGGT 61.344 63.158 0.00 0.00 0.00 4.69
1398 1502 0.813821 TGTCTGCCTCTCACTGATCG 59.186 55.000 0.00 0.00 0.00 3.69
1424 1536 7.876857 TTTTGACGATAATCTACGTACGTAC 57.123 36.000 23.60 15.90 42.74 3.67
1425 1537 8.334632 TGATTTTGACGATAATCTACGTACGTA 58.665 33.333 25.41 25.41 42.74 3.57
1456 1571 6.529829 TCTGAAAACCAAGAACAACAAAATCG 59.470 34.615 0.00 0.00 0.00 3.34
1681 1796 4.884257 GGCGTCTTGGCGGCGATA 62.884 66.667 12.98 0.00 46.64 2.92
1879 2090 1.339342 CCAGTCATGCATGTCACCTGA 60.339 52.381 25.43 2.95 0.00 3.86
1941 2152 4.213564 ACAACCACAATCAAGCCAAAAA 57.786 36.364 0.00 0.00 0.00 1.94
2207 2448 3.120041 GTGACAAACGGGGAACATTTTG 58.880 45.455 0.00 0.00 38.74 2.44
2229 2473 8.233190 CAGTCATATCAACTTTCCAAGAGAAAC 58.767 37.037 0.00 0.00 39.60 2.78
2287 2534 1.066605 TGGCCGCTCGAGTAGATAAAC 59.933 52.381 15.13 0.00 0.00 2.01
2424 2671 4.693095 AGGCTTCGAGAAAGAGAAAATCAC 59.307 41.667 0.00 0.00 37.12 3.06
2452 2699 8.267620 TGAACAAACCATGTATCATCTTACAG 57.732 34.615 0.00 0.00 42.99 2.74
2631 2878 6.387220 AGAGGCTGGGTGTAATTAGTATCTTT 59.613 38.462 0.00 0.00 0.00 2.52
2639 2886 3.453353 GGTGTAGAGGCTGGGTGTAATTA 59.547 47.826 0.00 0.00 0.00 1.40
2649 2896 0.888619 TCTTGTCGGTGTAGAGGCTG 59.111 55.000 0.00 0.00 0.00 4.85
2650 2897 1.853963 ATCTTGTCGGTGTAGAGGCT 58.146 50.000 0.00 0.00 0.00 4.58
2651 2898 5.646577 ATATATCTTGTCGGTGTAGAGGC 57.353 43.478 0.00 0.00 0.00 4.70
2652 2899 9.976511 TTTTTATATATCTTGTCGGTGTAGAGG 57.023 33.333 0.00 0.00 0.00 3.69
2669 2916 9.183368 TGTGTGCATCCTGAATGTTTTTATATA 57.817 29.630 0.00 0.00 37.71 0.86
2670 2917 8.065473 TGTGTGCATCCTGAATGTTTTTATAT 57.935 30.769 0.00 0.00 37.71 0.86
2671 2918 7.392953 TCTGTGTGCATCCTGAATGTTTTTATA 59.607 33.333 0.00 0.00 37.71 0.98
2682 2929 2.636647 TTTGTCTGTGTGCATCCTGA 57.363 45.000 0.00 0.00 0.00 3.86
2752 2999 1.084370 GTTAGGGTGCTGCTACTGCG 61.084 60.000 0.00 0.00 43.34 5.18
2762 3009 1.818674 CTTTGATGGTGGTTAGGGTGC 59.181 52.381 0.00 0.00 0.00 5.01
2766 3013 4.396166 GTGATGTCTTTGATGGTGGTTAGG 59.604 45.833 0.00 0.00 0.00 2.69
2777 3024 4.416516 TCTAGTCCAGGTGATGTCTTTGA 58.583 43.478 0.00 0.00 0.00 2.69
2786 3033 6.019748 AGAATCTTCTTTCTAGTCCAGGTGA 58.980 40.000 0.00 0.00 34.21 4.02
2805 3052 1.541588 AGGCGTTGCTTTTGGAGAATC 59.458 47.619 0.00 0.00 0.00 2.52
2806 3053 1.541588 GAGGCGTTGCTTTTGGAGAAT 59.458 47.619 0.00 0.00 0.00 2.40
2830 3077 7.322699 CGACAACGCTTCTACATTGTTATTTTT 59.677 33.333 0.00 0.00 35.47 1.94
2835 3082 4.300803 ACGACAACGCTTCTACATTGTTA 58.699 39.130 0.00 0.00 43.96 2.41
2837 3084 2.750948 ACGACAACGCTTCTACATTGT 58.249 42.857 0.00 0.00 43.96 2.71
2843 3090 0.032952 AGGCAACGACAACGCTTCTA 59.967 50.000 0.00 0.00 43.96 2.10
2845 3092 1.082756 CAGGCAACGACAACGCTTC 60.083 57.895 0.00 0.00 43.96 3.86
2849 3096 0.865111 TTGATCAGGCAACGACAACG 59.135 50.000 0.00 0.00 46.39 4.10
2853 3100 2.029728 CGATCTTTGATCAGGCAACGAC 59.970 50.000 8.09 0.00 46.39 4.34
2862 3109 5.642063 GGTGAAAACCTACGATCTTTGATCA 59.358 40.000 8.09 0.00 0.00 2.92
2865 3112 4.041198 AGGGTGAAAACCTACGATCTTTGA 59.959 41.667 0.00 0.00 36.32 2.69
2874 3121 3.672767 TTCTCGAGGGTGAAAACCTAC 57.327 47.619 13.56 0.00 38.79 3.18
2889 3136 0.942410 TGGAAACGCGGTCTTTCTCG 60.942 55.000 12.47 0.00 0.00 4.04
2890 3137 1.223187 TTGGAAACGCGGTCTTTCTC 58.777 50.000 12.47 0.00 0.00 2.87
2955 3202 5.070001 TCAGGATGAAAACTTAACACCTGG 58.930 41.667 0.00 0.00 45.97 4.45
2973 3220 1.616865 ACCGAGACGTGATTTTCAGGA 59.383 47.619 0.00 0.00 35.94 3.86
3001 3248 4.217767 GGACTTCTTTGTTGGTGGTATTCC 59.782 45.833 0.00 0.00 0.00 3.01
3072 3319 6.148480 ACAACAAGTAGACAATCTGATGAAGC 59.852 38.462 0.00 0.00 0.00 3.86
3073 3320 7.360691 CCACAACAAGTAGACAATCTGATGAAG 60.361 40.741 0.00 0.00 0.00 3.02
3077 3324 5.869579 ACCACAACAAGTAGACAATCTGAT 58.130 37.500 0.00 0.00 0.00 2.90
3094 3341 2.228343 ACGGTGAAAAACGAAACCACAA 59.772 40.909 0.00 0.00 32.69 3.33
3101 3348 4.159857 CAAAAGACACGGTGAAAAACGAA 58.840 39.130 16.29 0.00 0.00 3.85
3118 3365 3.547468 CCTGCAACGAACAAGAACAAAAG 59.453 43.478 0.00 0.00 0.00 2.27
3253 3501 3.457234 CAAAGTGCCTGAACTTTTTCCC 58.543 45.455 0.31 0.00 45.84 3.97
3273 3522 0.576798 CAGCGCGATCGAAAATAGCA 59.423 50.000 21.57 0.00 38.10 3.49
3388 3638 2.487762 TGTGCAATTTCCTTCGTGGATC 59.512 45.455 0.00 0.00 45.68 3.36
3392 3642 2.794350 GGTTTGTGCAATTTCCTTCGTG 59.206 45.455 0.00 0.00 0.00 4.35
3393 3643 2.428890 TGGTTTGTGCAATTTCCTTCGT 59.571 40.909 0.00 0.00 0.00 3.85
3396 3646 2.158827 GGGTGGTTTGTGCAATTTCCTT 60.159 45.455 0.00 0.00 0.00 3.36
3444 3694 5.106673 GCAACAAACCATAGAGTAGGTGTTC 60.107 44.000 0.00 0.00 38.37 3.18
3525 3776 6.831353 ACCCATGGAAAATCATATCAACGTAA 59.169 34.615 15.22 0.00 0.00 3.18
3544 3795 3.912496 TCTACAGTTGATGGACCCATG 57.088 47.619 6.23 0.00 36.70 3.66
3559 3810 7.649533 TTATAAGTCCTCGGTTTGATCTACA 57.350 36.000 0.00 0.00 0.00 2.74
3788 4052 9.664332 AGATCAATGCTAGATACATTTATGGTC 57.336 33.333 0.00 0.00 35.58 4.02
3812 4076 6.467677 CCAAATGAGTTGAGACTTTCCTAGA 58.532 40.000 0.00 0.00 39.87 2.43
3821 4085 4.187694 CTCTAGCCCAAATGAGTTGAGAC 58.812 47.826 0.00 0.00 39.87 3.36
3825 4089 3.356529 ACCTCTAGCCCAAATGAGTTG 57.643 47.619 0.00 0.00 36.94 3.16
3827 4091 3.562176 CCAAACCTCTAGCCCAAATGAGT 60.562 47.826 0.00 0.00 0.00 3.41
3855 4119 7.632721 TGAACGGTCTAACTAAAATTGACAAC 58.367 34.615 0.33 0.00 0.00 3.32
3874 4138 1.135689 GCACTGCACCTTATTGAACGG 60.136 52.381 0.00 0.00 0.00 4.44
3889 4153 4.767255 GAGCGGGGTGGAGCACTG 62.767 72.222 0.00 0.00 34.40 3.66
3890 4154 3.602075 TAGAGCGGGGTGGAGCACT 62.602 63.158 0.00 0.00 37.92 4.40
3891 4155 2.579684 CTTAGAGCGGGGTGGAGCAC 62.580 65.000 0.00 0.00 35.48 4.40
3894 4158 0.461961 CTTCTTAGAGCGGGGTGGAG 59.538 60.000 0.00 0.00 0.00 3.86
3902 4166 7.172532 AGAGTCATAGTCATACTTCTTAGAGCG 59.827 40.741 0.00 0.00 0.00 5.03
3925 4189 5.353938 CATTTGGGTATTGGCAAATCAGAG 58.646 41.667 3.01 0.00 0.00 3.35
3927 4191 4.444536 CCATTTGGGTATTGGCAAATCAG 58.555 43.478 3.01 0.00 0.00 2.90
3943 4207 3.119849 GCAAGCAGTACACTACCCATTTG 60.120 47.826 0.00 0.00 0.00 2.32
3987 4251 5.052481 GCCAAGTTGAGCAGAAATTTTCTT 58.948 37.500 8.95 0.00 38.11 2.52
3998 4262 1.032014 GACCTTTGCCAAGTTGAGCA 58.968 50.000 13.07 13.07 37.18 4.26
4005 4269 1.280421 AGCTCCTAGACCTTTGCCAAG 59.720 52.381 0.00 0.00 0.00 3.61
4008 4272 3.847671 AATAGCTCCTAGACCTTTGCC 57.152 47.619 0.00 0.00 0.00 4.52
4024 4288 7.442969 TCAACCACCAACTACAACTGTTAATAG 59.557 37.037 0.00 0.00 0.00 1.73
4033 4297 3.880490 TCACATCAACCACCAACTACAAC 59.120 43.478 0.00 0.00 0.00 3.32
4034 4298 3.880490 GTCACATCAACCACCAACTACAA 59.120 43.478 0.00 0.00 0.00 2.41
4036 4300 3.498397 CAGTCACATCAACCACCAACTAC 59.502 47.826 0.00 0.00 0.00 2.73
4055 4319 2.765699 ACACATGGCAAAGAAAACCAGT 59.234 40.909 0.00 0.00 36.78 4.00
4057 4321 2.741228 GCACACATGGCAAAGAAAACCA 60.741 45.455 0.00 0.00 37.99 3.67
4058 4322 1.866601 GCACACATGGCAAAGAAAACC 59.133 47.619 0.00 0.00 0.00 3.27
4064 4328 2.034432 TGTAAGTGCACACATGGCAAAG 59.966 45.455 21.04 0.00 43.91 2.77
4072 4336 0.250081 TCCGCATGTAAGTGCACACA 60.250 50.000 21.04 16.02 45.30 3.72
4091 4355 3.312890 TGTGATTTTTCATGGGTGGGTT 58.687 40.909 0.00 0.00 0.00 4.11
4102 4367 8.660373 TGTTTTGGTATGTTGTTGTGATTTTTC 58.340 29.630 0.00 0.00 0.00 2.29
4123 4388 5.491982 CTGCTAGGTCTAATCCAGTGTTTT 58.508 41.667 0.00 0.00 0.00 2.43
4140 4405 3.544684 TGGTGTAATCCATTGCTGCTAG 58.455 45.455 0.00 0.00 31.96 3.42
4141 4406 3.643199 TGGTGTAATCCATTGCTGCTA 57.357 42.857 0.00 0.00 31.96 3.49
4142 4407 2.512692 TGGTGTAATCCATTGCTGCT 57.487 45.000 0.00 0.00 31.96 4.24
4143 4408 3.806625 ATTGGTGTAATCCATTGCTGC 57.193 42.857 0.00 0.00 37.33 5.25
4144 4409 6.210796 CACATATTGGTGTAATCCATTGCTG 58.789 40.000 0.00 0.00 37.33 4.41
4145 4410 5.302568 CCACATATTGGTGTAATCCATTGCT 59.697 40.000 0.00 0.00 41.10 3.91
4146 4411 5.531634 CCACATATTGGTGTAATCCATTGC 58.468 41.667 0.00 0.00 41.10 3.56
4160 4425 9.502145 GTTTGTCACACATAATACCACATATTG 57.498 33.333 0.00 0.00 35.08 1.90
4161 4426 8.682710 GGTTTGTCACACATAATACCACATATT 58.317 33.333 0.00 0.00 37.29 1.28
4162 4427 7.284489 GGGTTTGTCACACATAATACCACATAT 59.716 37.037 0.00 0.00 0.00 1.78
4163 4428 6.600032 GGGTTTGTCACACATAATACCACATA 59.400 38.462 0.00 0.00 0.00 2.29
4164 4429 5.417580 GGGTTTGTCACACATAATACCACAT 59.582 40.000 0.00 0.00 0.00 3.21
4165 4430 4.762765 GGGTTTGTCACACATAATACCACA 59.237 41.667 0.00 0.00 0.00 4.17
4166 4431 4.142773 CGGGTTTGTCACACATAATACCAC 60.143 45.833 0.00 0.00 0.00 4.16
4167 4432 4.004314 CGGGTTTGTCACACATAATACCA 58.996 43.478 0.00 0.00 0.00 3.25
4168 4433 4.004982 ACGGGTTTGTCACACATAATACC 58.995 43.478 0.00 0.00 0.00 2.73
4169 4434 6.101332 TCTACGGGTTTGTCACACATAATAC 58.899 40.000 0.00 0.00 0.00 1.89
4170 4435 6.071221 ACTCTACGGGTTTGTCACACATAATA 60.071 38.462 0.00 0.00 0.00 0.98
4171 4436 5.155278 TCTACGGGTTTGTCACACATAAT 57.845 39.130 0.00 0.00 0.00 1.28
4172 4437 4.039488 ACTCTACGGGTTTGTCACACATAA 59.961 41.667 0.00 0.00 0.00 1.90
4173 4438 3.575256 ACTCTACGGGTTTGTCACACATA 59.425 43.478 0.00 0.00 0.00 2.29
4174 4439 2.367567 ACTCTACGGGTTTGTCACACAT 59.632 45.455 0.00 0.00 0.00 3.21
4175 4440 1.758280 ACTCTACGGGTTTGTCACACA 59.242 47.619 0.00 0.00 0.00 3.72
4176 4441 2.521105 ACTCTACGGGTTTGTCACAC 57.479 50.000 0.00 0.00 0.00 3.82
4177 4442 3.638160 ACTTACTCTACGGGTTTGTCACA 59.362 43.478 0.00 0.00 0.00 3.58
4178 4443 3.985925 CACTTACTCTACGGGTTTGTCAC 59.014 47.826 0.00 0.00 0.00 3.67
4179 4444 3.553508 GCACTTACTCTACGGGTTTGTCA 60.554 47.826 0.00 0.00 0.00 3.58
4180 4445 2.991866 GCACTTACTCTACGGGTTTGTC 59.008 50.000 0.00 0.00 0.00 3.18
4181 4446 2.631545 AGCACTTACTCTACGGGTTTGT 59.368 45.455 0.00 0.00 0.00 2.83
4182 4447 3.056749 AGAGCACTTACTCTACGGGTTTG 60.057 47.826 0.00 0.00 45.25 2.93
4183 4448 3.163467 AGAGCACTTACTCTACGGGTTT 58.837 45.455 0.00 0.00 45.25 3.27
4184 4449 2.805194 AGAGCACTTACTCTACGGGTT 58.195 47.619 0.00 0.00 45.25 4.11
4185 4450 2.510928 AGAGCACTTACTCTACGGGT 57.489 50.000 0.00 0.00 45.25 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.