Multiple sequence alignment - TraesCS2A01G298200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G298200 chr2A 100.000 4824 0 0 1 4824 513648593 513643770 0.000000e+00 8909.0
1 TraesCS2A01G298200 chr2A 95.019 261 13 0 1 261 404908437 404908177 1.250000e-110 411.0
2 TraesCS2A01G298200 chr2A 93.870 261 16 0 1 261 396203542 396203802 1.260000e-105 394.0
3 TraesCS2A01G298200 chr2D 93.151 4322 160 52 359 4653 378726881 378722669 0.000000e+00 6216.0
4 TraesCS2A01G298200 chr2B 93.076 3004 144 30 262 3251 449843052 449840099 0.000000e+00 4337.0
5 TraesCS2A01G298200 chr2B 93.657 804 39 6 3289 4087 449840094 449839298 0.000000e+00 1192.0
6 TraesCS2A01G298200 chr2B 88.722 665 51 9 4086 4745 449839257 449838612 0.000000e+00 791.0
7 TraesCS2A01G298200 chr5B 100.000 261 0 0 1 261 639130548 639130288 2.610000e-132 483.0
8 TraesCS2A01G298200 chr5B 91.379 232 17 3 4 234 22534336 22534107 1.010000e-81 315.0
9 TraesCS2A01G298200 chr5B 88.517 209 14 6 548 751 30595243 30595446 1.340000e-60 244.0
10 TraesCS2A01G298200 chr5B 87.560 209 16 7 548 751 326666288 326666085 2.900000e-57 233.0
11 TraesCS2A01G298200 chr5B 81.933 238 24 12 262 497 326666508 326666288 2.970000e-42 183.0
12 TraesCS2A01G298200 chr5B 76.552 145 26 7 4666 4804 302082502 302082360 6.700000e-09 73.1
13 TraesCS2A01G298200 chr3A 100.000 261 0 0 1 261 363426253 363426513 2.610000e-132 483.0
14 TraesCS2A01G298200 chr5A 99.234 261 2 0 1 261 341142010 341142270 5.650000e-129 472.0
15 TraesCS2A01G298200 chr1A 96.552 261 9 0 1 261 440681175 440680915 2.670000e-117 433.0
16 TraesCS2A01G298200 chr4B 90.517 232 16 4 4 234 420852968 420852742 7.850000e-78 302.0
17 TraesCS2A01G298200 chr3B 88.995 209 13 6 548 751 753113890 753114093 2.880000e-62 250.0
18 TraesCS2A01G298200 chr3B 82.008 239 23 13 262 497 753113669 753113890 8.240000e-43 185.0
19 TraesCS2A01G298200 chr7B 88.038 209 15 6 548 751 478897754 478897551 6.240000e-59 239.0
20 TraesCS2A01G298200 chr7B 82.353 238 24 11 262 497 478897975 478897754 1.770000e-44 191.0
21 TraesCS2A01G298200 chr1B 100.000 124 0 0 138 261 171615427 171615304 3.760000e-56 230.0
22 TraesCS2A01G298200 chr1B 91.071 168 9 3 550 714 35321608 35321444 6.280000e-54 222.0
23 TraesCS2A01G298200 chr1B 81.933 238 25 12 262 497 35321831 35321610 8.240000e-43 185.0
24 TraesCS2A01G298200 chr4A 76.879 173 33 5 4658 4824 416226887 416227058 1.850000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G298200 chr2A 513643770 513648593 4823 True 8909.000000 8909 100.000000 1 4824 1 chr2A.!!$R2 4823
1 TraesCS2A01G298200 chr2D 378722669 378726881 4212 True 6216.000000 6216 93.151000 359 4653 1 chr2D.!!$R1 4294
2 TraesCS2A01G298200 chr2B 449838612 449843052 4440 True 2106.666667 4337 91.818333 262 4745 3 chr2B.!!$R1 4483

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.032813 AACAGGGGGCAGATTCATGG 60.033 55.000 0.00 0.00 0.00 3.66 F
226 227 0.042581 TGGGGATCTAGGCACAGTGA 59.957 55.000 4.15 0.00 0.00 3.41 F
326 327 0.098728 GTGCGTCTGTGCTTGTGTTT 59.901 50.000 0.00 0.00 35.36 2.83 F
517 519 0.104671 GCATCTCTGTGCTCCTCCTC 59.895 60.000 0.00 0.00 41.82 3.71 F
733 740 0.116940 AAACCATGGGATGTTGGGCT 59.883 50.000 18.09 0.00 37.32 5.19 F
1128 1135 0.536724 GATTGGCGCCAAGGGAATTT 59.463 50.000 41.38 26.38 39.47 1.82 F
1906 1913 1.080498 TGTATGGGGGAGAGAACCACT 59.920 52.381 0.00 0.00 37.05 4.00 F
3472 3486 1.004927 GAAGCCAAATCGGTTCGATCG 60.005 52.381 9.36 9.36 46.30 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1270 1277 0.595095 CTTTCCTGCAAGTCAGCACC 59.405 55.000 0.00 0.00 41.50 5.01 R
2028 2035 0.956633 CATCACCTGTATGGCCATGC 59.043 55.000 29.04 27.15 40.22 4.06 R
2293 2307 3.228188 TCTGAGCCAACTTTCCACAAT 57.772 42.857 0.00 0.00 0.00 2.71 R
2523 2537 5.495640 TGTTGGCAATTTCAAAGGAAAGTT 58.504 33.333 1.92 0.00 45.58 2.66 R
2634 2648 1.594293 AGTTGACGACCCGCTTGTG 60.594 57.895 0.00 0.00 0.00 3.33 R
2770 2784 7.224362 TGCCAACAACAAAATTCTGATTTACAG 59.776 33.333 0.00 0.00 46.97 2.74 R
3595 3609 0.035056 AACGGCTTTCTCCTCCATGG 60.035 55.000 4.97 4.97 37.10 3.66 R
4797 4869 0.106521 GCAACCAAACAGGCCACATT 59.893 50.000 5.01 0.00 43.14 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.408182 CTACCAGTAATGAGGGGTTCAG 57.592 50.000 0.00 0.00 39.68 3.02
22 23 1.916181 ACCAGTAATGAGGGGTTCAGG 59.084 52.381 0.00 0.00 39.68 3.86
23 24 1.916181 CCAGTAATGAGGGGTTCAGGT 59.084 52.381 0.00 0.00 39.68 4.00
24 25 2.308866 CCAGTAATGAGGGGTTCAGGTT 59.691 50.000 0.00 0.00 39.68 3.50
25 26 3.610911 CAGTAATGAGGGGTTCAGGTTC 58.389 50.000 0.00 0.00 39.68 3.62
26 27 3.009033 CAGTAATGAGGGGTTCAGGTTCA 59.991 47.826 0.00 0.00 39.68 3.18
27 28 3.655777 AGTAATGAGGGGTTCAGGTTCAA 59.344 43.478 0.00 0.00 39.68 2.69
28 29 2.586648 ATGAGGGGTTCAGGTTCAAC 57.413 50.000 0.00 0.00 39.68 3.18
29 30 1.217916 TGAGGGGTTCAGGTTCAACA 58.782 50.000 0.00 0.00 0.00 3.33
30 31 1.142870 TGAGGGGTTCAGGTTCAACAG 59.857 52.381 0.00 0.00 0.00 3.16
31 32 0.478507 AGGGGTTCAGGTTCAACAGG 59.521 55.000 0.00 0.00 0.00 4.00
32 33 0.539669 GGGGTTCAGGTTCAACAGGG 60.540 60.000 0.00 0.00 0.00 4.45
33 34 0.539669 GGGTTCAGGTTCAACAGGGG 60.540 60.000 0.00 0.00 0.00 4.79
34 35 0.539669 GGTTCAGGTTCAACAGGGGG 60.540 60.000 0.00 0.00 0.00 5.40
35 36 1.152830 TTCAGGTTCAACAGGGGGC 59.847 57.895 0.00 0.00 0.00 5.80
36 37 1.650242 TTCAGGTTCAACAGGGGGCA 61.650 55.000 0.00 0.00 0.00 5.36
37 38 1.604593 CAGGTTCAACAGGGGGCAG 60.605 63.158 0.00 0.00 0.00 4.85
38 39 1.774217 AGGTTCAACAGGGGGCAGA 60.774 57.895 0.00 0.00 0.00 4.26
39 40 1.142688 AGGTTCAACAGGGGGCAGAT 61.143 55.000 0.00 0.00 0.00 2.90
40 41 0.251787 GGTTCAACAGGGGGCAGATT 60.252 55.000 0.00 0.00 0.00 2.40
41 42 1.177401 GTTCAACAGGGGGCAGATTC 58.823 55.000 0.00 0.00 0.00 2.52
42 43 0.776810 TTCAACAGGGGGCAGATTCA 59.223 50.000 0.00 0.00 0.00 2.57
43 44 1.002069 TCAACAGGGGGCAGATTCAT 58.998 50.000 0.00 0.00 0.00 2.57
44 45 1.108776 CAACAGGGGGCAGATTCATG 58.891 55.000 0.00 0.00 0.00 3.07
45 46 0.032813 AACAGGGGGCAGATTCATGG 60.033 55.000 0.00 0.00 0.00 3.66
46 47 0.920763 ACAGGGGGCAGATTCATGGA 60.921 55.000 0.00 0.00 0.00 3.41
47 48 0.178998 CAGGGGGCAGATTCATGGAG 60.179 60.000 0.00 0.00 0.00 3.86
48 49 0.625683 AGGGGGCAGATTCATGGAGT 60.626 55.000 0.00 0.00 0.00 3.85
49 50 1.140312 GGGGGCAGATTCATGGAGTA 58.860 55.000 0.00 0.00 0.00 2.59
50 51 1.202818 GGGGGCAGATTCATGGAGTAC 60.203 57.143 0.00 0.00 0.00 2.73
51 52 1.771255 GGGGCAGATTCATGGAGTACT 59.229 52.381 0.00 0.00 0.00 2.73
52 53 2.173569 GGGGCAGATTCATGGAGTACTT 59.826 50.000 0.00 0.00 0.00 2.24
53 54 3.471680 GGGCAGATTCATGGAGTACTTC 58.528 50.000 0.00 0.00 0.00 3.01
54 55 3.118261 GGGCAGATTCATGGAGTACTTCA 60.118 47.826 6.25 6.25 0.00 3.02
55 56 3.873952 GGCAGATTCATGGAGTACTTCAC 59.126 47.826 5.84 0.00 0.00 3.18
56 57 4.383552 GGCAGATTCATGGAGTACTTCACT 60.384 45.833 5.84 0.00 41.47 3.41
57 58 4.569966 GCAGATTCATGGAGTACTTCACTG 59.430 45.833 5.84 9.96 37.72 3.66
58 59 4.569966 CAGATTCATGGAGTACTTCACTGC 59.430 45.833 5.84 0.00 45.40 4.40
59 60 3.334583 TTCATGGAGTACTTCACTGCC 57.665 47.619 5.84 0.00 44.61 4.85
60 61 2.256306 TCATGGAGTACTTCACTGCCA 58.744 47.619 5.84 3.36 44.61 4.92
61 62 2.234661 TCATGGAGTACTTCACTGCCAG 59.765 50.000 5.84 0.00 44.61 4.85
62 63 1.717032 TGGAGTACTTCACTGCCAGT 58.283 50.000 0.00 0.00 44.61 4.00
63 64 1.344438 TGGAGTACTTCACTGCCAGTG 59.656 52.381 18.85 18.85 44.61 3.66
64 65 1.338200 GGAGTACTTCACTGCCAGTGG 60.338 57.143 23.85 11.82 45.94 4.00
83 84 2.627699 TGGCAACCACTGAAGAAAATCC 59.372 45.455 0.00 0.00 0.00 3.01
84 85 2.893489 GGCAACCACTGAAGAAAATCCT 59.107 45.455 0.00 0.00 0.00 3.24
85 86 4.079253 GGCAACCACTGAAGAAAATCCTA 58.921 43.478 0.00 0.00 0.00 2.94
86 87 4.706962 GGCAACCACTGAAGAAAATCCTAT 59.293 41.667 0.00 0.00 0.00 2.57
87 88 5.393461 GGCAACCACTGAAGAAAATCCTATG 60.393 44.000 0.00 0.00 0.00 2.23
88 89 5.183904 GCAACCACTGAAGAAAATCCTATGT 59.816 40.000 0.00 0.00 0.00 2.29
89 90 6.623767 GCAACCACTGAAGAAAATCCTATGTC 60.624 42.308 0.00 0.00 0.00 3.06
90 91 5.178797 ACCACTGAAGAAAATCCTATGTCG 58.821 41.667 0.00 0.00 0.00 4.35
91 92 5.046591 ACCACTGAAGAAAATCCTATGTCGA 60.047 40.000 0.00 0.00 0.00 4.20
92 93 5.874810 CCACTGAAGAAAATCCTATGTCGAA 59.125 40.000 0.00 0.00 0.00 3.71
93 94 6.036517 CCACTGAAGAAAATCCTATGTCGAAG 59.963 42.308 0.00 0.00 0.00 3.79
94 95 6.036517 CACTGAAGAAAATCCTATGTCGAAGG 59.963 42.308 0.00 0.00 35.26 3.46
95 96 4.876107 TGAAGAAAATCCTATGTCGAAGGC 59.124 41.667 0.00 0.00 33.84 4.35
96 97 4.762289 AGAAAATCCTATGTCGAAGGCT 57.238 40.909 0.00 0.00 33.84 4.58
97 98 5.104259 AGAAAATCCTATGTCGAAGGCTT 57.896 39.130 0.00 0.00 33.84 4.35
98 99 5.119694 AGAAAATCCTATGTCGAAGGCTTC 58.880 41.667 17.33 17.33 33.84 3.86
99 100 4.762289 AAATCCTATGTCGAAGGCTTCT 57.238 40.909 23.74 8.67 33.84 2.85
100 101 4.762289 AATCCTATGTCGAAGGCTTCTT 57.238 40.909 23.74 6.26 33.84 2.52
101 102 4.762289 ATCCTATGTCGAAGGCTTCTTT 57.238 40.909 23.74 9.03 33.84 2.52
102 103 4.553330 TCCTATGTCGAAGGCTTCTTTT 57.447 40.909 23.74 9.34 33.84 2.27
103 104 4.253685 TCCTATGTCGAAGGCTTCTTTTG 58.746 43.478 23.74 9.35 33.84 2.44
104 105 4.003648 CCTATGTCGAAGGCTTCTTTTGT 58.996 43.478 23.74 9.38 0.00 2.83
105 106 3.904136 ATGTCGAAGGCTTCTTTTGTG 57.096 42.857 23.74 8.29 0.00 3.33
106 107 2.912771 TGTCGAAGGCTTCTTTTGTGA 58.087 42.857 23.74 10.47 0.00 3.58
107 108 3.275143 TGTCGAAGGCTTCTTTTGTGAA 58.725 40.909 23.74 2.99 0.00 3.18
108 109 3.882888 TGTCGAAGGCTTCTTTTGTGAAT 59.117 39.130 23.74 0.00 0.00 2.57
109 110 4.222114 GTCGAAGGCTTCTTTTGTGAATG 58.778 43.478 23.74 5.51 0.00 2.67
110 111 4.024048 GTCGAAGGCTTCTTTTGTGAATGA 60.024 41.667 23.74 7.72 0.00 2.57
111 112 4.578516 TCGAAGGCTTCTTTTGTGAATGAA 59.421 37.500 23.74 0.00 0.00 2.57
112 113 5.067153 TCGAAGGCTTCTTTTGTGAATGAAA 59.933 36.000 23.74 0.00 31.12 2.69
113 114 5.748152 CGAAGGCTTCTTTTGTGAATGAAAA 59.252 36.000 23.74 0.00 31.12 2.29
114 115 6.074676 CGAAGGCTTCTTTTGTGAATGAAAAG 60.075 38.462 23.74 0.00 40.38 2.27
115 116 6.225981 AGGCTTCTTTTGTGAATGAAAAGT 57.774 33.333 0.00 0.00 40.08 2.66
116 117 6.643388 AGGCTTCTTTTGTGAATGAAAAGTT 58.357 32.000 0.00 0.00 40.08 2.66
117 118 7.105588 AGGCTTCTTTTGTGAATGAAAAGTTT 58.894 30.769 0.00 0.00 40.08 2.66
118 119 8.257306 AGGCTTCTTTTGTGAATGAAAAGTTTA 58.743 29.630 0.00 0.00 40.08 2.01
119 120 8.328146 GGCTTCTTTTGTGAATGAAAAGTTTAC 58.672 33.333 0.00 0.00 40.08 2.01
120 121 8.868916 GCTTCTTTTGTGAATGAAAAGTTTACA 58.131 29.630 0.00 0.00 40.08 2.41
147 148 9.677567 TCTTTATGAAAACTGACTTGTAAATGC 57.322 29.630 0.00 0.00 0.00 3.56
148 149 8.810652 TTTATGAAAACTGACTTGTAAATGCC 57.189 30.769 0.00 0.00 0.00 4.40
149 150 5.843673 TGAAAACTGACTTGTAAATGCCA 57.156 34.783 0.00 0.00 0.00 4.92
150 151 5.830912 TGAAAACTGACTTGTAAATGCCAG 58.169 37.500 0.00 0.00 0.00 4.85
151 152 4.853924 AAACTGACTTGTAAATGCCAGG 57.146 40.909 0.00 0.00 0.00 4.45
152 153 3.508845 ACTGACTTGTAAATGCCAGGT 57.491 42.857 0.00 0.00 0.00 4.00
153 154 3.832527 ACTGACTTGTAAATGCCAGGTT 58.167 40.909 0.00 0.00 0.00 3.50
154 155 4.215109 ACTGACTTGTAAATGCCAGGTTT 58.785 39.130 0.00 0.00 0.00 3.27
155 156 5.381757 ACTGACTTGTAAATGCCAGGTTTA 58.618 37.500 0.00 0.00 0.00 2.01
156 157 6.010219 ACTGACTTGTAAATGCCAGGTTTAT 58.990 36.000 0.00 0.00 0.00 1.40
157 158 6.071952 ACTGACTTGTAAATGCCAGGTTTATG 60.072 38.462 0.00 0.00 0.00 1.90
158 159 5.772672 TGACTTGTAAATGCCAGGTTTATGT 59.227 36.000 0.00 0.00 0.00 2.29
159 160 6.943146 TGACTTGTAAATGCCAGGTTTATGTA 59.057 34.615 0.00 0.00 0.00 2.29
160 161 7.448777 TGACTTGTAAATGCCAGGTTTATGTAA 59.551 33.333 0.00 0.00 0.00 2.41
161 162 7.599171 ACTTGTAAATGCCAGGTTTATGTAAC 58.401 34.615 0.00 0.00 35.94 2.50
162 163 7.450323 ACTTGTAAATGCCAGGTTTATGTAACT 59.550 33.333 0.00 0.00 36.93 2.24
163 164 8.865420 TTGTAAATGCCAGGTTTATGTAACTA 57.135 30.769 0.00 0.00 36.93 2.24
164 165 8.865420 TGTAAATGCCAGGTTTATGTAACTAA 57.135 30.769 0.00 0.00 36.93 2.24
165 166 9.298250 TGTAAATGCCAGGTTTATGTAACTAAA 57.702 29.630 0.00 0.00 36.93 1.85
168 169 9.483916 AAATGCCAGGTTTATGTAACTAAAAAC 57.516 29.630 0.00 0.00 36.93 2.43
169 170 7.826918 TGCCAGGTTTATGTAACTAAAAACT 57.173 32.000 0.00 0.00 36.93 2.66
170 171 7.878036 TGCCAGGTTTATGTAACTAAAAACTC 58.122 34.615 0.00 0.00 36.93 3.01
171 172 7.502895 TGCCAGGTTTATGTAACTAAAAACTCA 59.497 33.333 0.00 0.00 36.93 3.41
172 173 8.021396 GCCAGGTTTATGTAACTAAAAACTCAG 58.979 37.037 0.00 0.00 36.93 3.35
173 174 9.280174 CCAGGTTTATGTAACTAAAAACTCAGA 57.720 33.333 0.00 0.00 36.93 3.27
182 183 9.607988 TGTAACTAAAAACTCAGACTTGAATGA 57.392 29.630 0.00 0.00 31.69 2.57
185 186 9.956720 AACTAAAAACTCAGACTTGAATGAATG 57.043 29.630 0.00 0.00 31.69 2.67
186 187 8.078596 ACTAAAAACTCAGACTTGAATGAATGC 58.921 33.333 0.00 0.00 31.69 3.56
187 188 6.645790 AAAACTCAGACTTGAATGAATGCT 57.354 33.333 0.00 0.00 31.69 3.79
188 189 6.645790 AAACTCAGACTTGAATGAATGCTT 57.354 33.333 0.00 0.00 31.69 3.91
189 190 7.750229 AAACTCAGACTTGAATGAATGCTTA 57.250 32.000 0.00 0.00 31.69 3.09
190 191 7.934855 AACTCAGACTTGAATGAATGCTTAT 57.065 32.000 0.00 0.00 31.69 1.73
191 192 7.317842 ACTCAGACTTGAATGAATGCTTATG 57.682 36.000 0.00 0.00 31.69 1.90
192 193 6.883217 ACTCAGACTTGAATGAATGCTTATGT 59.117 34.615 0.00 0.00 31.69 2.29
193 194 7.392673 ACTCAGACTTGAATGAATGCTTATGTT 59.607 33.333 0.00 0.00 31.69 2.71
194 195 8.791327 TCAGACTTGAATGAATGCTTATGTTA 57.209 30.769 0.00 0.00 0.00 2.41
195 196 8.668353 TCAGACTTGAATGAATGCTTATGTTAC 58.332 33.333 0.00 0.00 0.00 2.50
196 197 8.453320 CAGACTTGAATGAATGCTTATGTTACA 58.547 33.333 0.00 0.00 0.00 2.41
197 198 9.182214 AGACTTGAATGAATGCTTATGTTACAT 57.818 29.630 2.58 2.58 0.00 2.29
198 199 9.793252 GACTTGAATGAATGCTTATGTTACATT 57.207 29.630 2.23 0.00 36.74 2.71
211 212 9.691362 GCTTATGTTACATTACATATTTTGGGG 57.309 33.333 2.23 0.00 39.88 4.96
215 216 9.881773 ATGTTACATTACATATTTTGGGGATCT 57.118 29.630 0.00 0.00 36.99 2.75
219 220 6.948309 ACATTACATATTTTGGGGATCTAGGC 59.052 38.462 0.00 0.00 0.00 3.93
220 221 6.523035 TTACATATTTTGGGGATCTAGGCA 57.477 37.500 0.00 0.00 0.00 4.75
221 222 4.729868 ACATATTTTGGGGATCTAGGCAC 58.270 43.478 0.00 0.00 0.00 5.01
222 223 4.167892 ACATATTTTGGGGATCTAGGCACA 59.832 41.667 0.00 0.00 0.00 4.57
223 224 2.806945 TTTTGGGGATCTAGGCACAG 57.193 50.000 0.00 0.00 0.00 3.66
224 225 1.668826 TTTGGGGATCTAGGCACAGT 58.331 50.000 0.00 0.00 0.00 3.55
225 226 0.911769 TTGGGGATCTAGGCACAGTG 59.088 55.000 0.00 0.00 0.00 3.66
226 227 0.042581 TGGGGATCTAGGCACAGTGA 59.957 55.000 4.15 0.00 0.00 3.41
227 228 0.466124 GGGGATCTAGGCACAGTGAC 59.534 60.000 4.15 0.00 0.00 3.67
228 229 1.490574 GGGATCTAGGCACAGTGACT 58.509 55.000 15.07 15.07 40.22 3.41
229 230 1.834263 GGGATCTAGGCACAGTGACTT 59.166 52.381 16.10 0.00 36.80 3.01
230 231 2.419297 GGGATCTAGGCACAGTGACTTG 60.419 54.545 16.10 13.47 36.80 3.16
231 232 2.234908 GGATCTAGGCACAGTGACTTGT 59.765 50.000 16.10 3.43 36.80 3.16
232 233 3.447586 GGATCTAGGCACAGTGACTTGTA 59.552 47.826 16.10 3.41 36.80 2.41
233 234 4.081642 GGATCTAGGCACAGTGACTTGTAA 60.082 45.833 16.10 0.00 36.80 2.41
234 235 4.521130 TCTAGGCACAGTGACTTGTAAG 57.479 45.455 16.10 5.84 36.80 2.34
235 236 3.895656 TCTAGGCACAGTGACTTGTAAGT 59.104 43.478 16.10 0.00 36.80 2.24
236 237 2.838736 AGGCACAGTGACTTGTAAGTG 58.161 47.619 1.73 0.00 39.88 3.16
237 238 2.170607 AGGCACAGTGACTTGTAAGTGT 59.829 45.455 1.73 0.00 39.88 3.55
238 239 2.544267 GGCACAGTGACTTGTAAGTGTC 59.456 50.000 4.15 0.00 39.88 3.67
239 240 3.194861 GCACAGTGACTTGTAAGTGTCA 58.805 45.455 4.15 0.00 39.88 3.58
240 241 3.246226 GCACAGTGACTTGTAAGTGTCAG 59.754 47.826 4.15 0.00 42.84 3.51
241 242 3.804325 CACAGTGACTTGTAAGTGTCAGG 59.196 47.826 1.35 0.00 42.84 3.86
242 243 3.451178 ACAGTGACTTGTAAGTGTCAGGT 59.549 43.478 1.35 0.00 42.84 4.00
243 244 4.081087 ACAGTGACTTGTAAGTGTCAGGTT 60.081 41.667 1.35 0.00 42.84 3.50
244 245 4.876107 CAGTGACTTGTAAGTGTCAGGTTT 59.124 41.667 1.35 0.00 42.84 3.27
245 246 6.046593 CAGTGACTTGTAAGTGTCAGGTTTA 58.953 40.000 1.35 0.00 42.84 2.01
246 247 6.537301 CAGTGACTTGTAAGTGTCAGGTTTAA 59.463 38.462 1.35 0.00 42.84 1.52
247 248 6.761714 AGTGACTTGTAAGTGTCAGGTTTAAG 59.238 38.462 1.35 0.00 42.84 1.85
248 249 6.537660 GTGACTTGTAAGTGTCAGGTTTAAGT 59.462 38.462 1.35 0.00 42.84 2.24
249 250 7.707893 GTGACTTGTAAGTGTCAGGTTTAAGTA 59.292 37.037 1.35 0.00 42.84 2.24
250 251 8.259411 TGACTTGTAAGTGTCAGGTTTAAGTAA 58.741 33.333 1.35 0.00 39.88 2.24
251 252 8.429493 ACTTGTAAGTGTCAGGTTTAAGTAAC 57.571 34.615 0.00 0.00 37.98 2.50
252 253 8.262933 ACTTGTAAGTGTCAGGTTTAAGTAACT 58.737 33.333 0.00 0.00 37.98 2.24
253 254 9.106070 CTTGTAAGTGTCAGGTTTAAGTAACTT 57.894 33.333 0.00 0.00 36.93 2.66
257 258 7.725818 AGTGTCAGGTTTAAGTAACTTAAGC 57.274 36.000 1.29 0.00 37.27 3.09
258 259 7.277396 AGTGTCAGGTTTAAGTAACTTAAGCA 58.723 34.615 1.29 0.00 38.36 3.91
259 260 7.226128 AGTGTCAGGTTTAAGTAACTTAAGCAC 59.774 37.037 1.29 0.85 38.36 4.40
260 261 7.011669 GTGTCAGGTTTAAGTAACTTAAGCACA 59.988 37.037 1.29 0.00 38.36 4.57
269 270 5.681639 AGTAACTTAAGCACAAGTTGGAGT 58.318 37.500 20.08 6.69 45.85 3.85
271 272 6.929606 AGTAACTTAAGCACAAGTTGGAGTAG 59.070 38.462 20.08 0.00 45.85 2.57
283 284 3.838903 AGTTGGAGTAGGGTTAGGAGTTG 59.161 47.826 0.00 0.00 0.00 3.16
284 285 2.185387 TGGAGTAGGGTTAGGAGTTGC 58.815 52.381 0.00 0.00 0.00 4.17
285 286 2.225547 TGGAGTAGGGTTAGGAGTTGCT 60.226 50.000 0.00 0.00 0.00 3.91
286 287 3.012047 TGGAGTAGGGTTAGGAGTTGCTA 59.988 47.826 0.00 0.00 0.00 3.49
287 288 3.637694 GGAGTAGGGTTAGGAGTTGCTAG 59.362 52.174 0.00 0.00 0.00 3.42
288 289 3.637694 GAGTAGGGTTAGGAGTTGCTAGG 59.362 52.174 0.00 0.00 0.00 3.02
289 290 2.644060 AGGGTTAGGAGTTGCTAGGT 57.356 50.000 0.00 0.00 0.00 3.08
290 291 2.468915 AGGGTTAGGAGTTGCTAGGTC 58.531 52.381 0.00 0.00 0.00 3.85
302 303 0.553819 GCTAGGTCAGAGGGAGGAGA 59.446 60.000 0.00 0.00 0.00 3.71
304 305 0.553819 TAGGTCAGAGGGAGGAGAGC 59.446 60.000 0.00 0.00 0.00 4.09
317 318 1.735920 GAGAGCCTGTGCGTCTGTG 60.736 63.158 0.00 0.00 44.33 3.66
318 319 3.418068 GAGCCTGTGCGTCTGTGC 61.418 66.667 0.00 0.00 44.33 4.57
319 320 3.873026 GAGCCTGTGCGTCTGTGCT 62.873 63.158 0.00 0.00 44.33 4.40
320 321 2.974698 GCCTGTGCGTCTGTGCTT 60.975 61.111 0.00 0.00 35.36 3.91
321 322 2.941333 CCTGTGCGTCTGTGCTTG 59.059 61.111 0.00 0.00 35.36 4.01
322 323 1.889105 CCTGTGCGTCTGTGCTTGT 60.889 57.895 0.00 0.00 35.36 3.16
323 324 1.277739 CTGTGCGTCTGTGCTTGTG 59.722 57.895 0.00 0.00 35.36 3.33
324 325 1.431488 CTGTGCGTCTGTGCTTGTGT 61.431 55.000 0.00 0.00 35.36 3.72
325 326 1.024046 TGTGCGTCTGTGCTTGTGTT 61.024 50.000 0.00 0.00 35.36 3.32
326 327 0.098728 GTGCGTCTGTGCTTGTGTTT 59.901 50.000 0.00 0.00 35.36 2.83
327 328 0.808125 TGCGTCTGTGCTTGTGTTTT 59.192 45.000 0.00 0.00 35.36 2.43
328 329 1.202132 TGCGTCTGTGCTTGTGTTTTC 60.202 47.619 0.00 0.00 35.36 2.29
345 346 0.323725 TTCCCCTTGCATCAGGCTTC 60.324 55.000 0.00 0.00 45.15 3.86
347 348 1.305623 CCCTTGCATCAGGCTTCCT 59.694 57.895 0.00 0.00 45.15 3.36
358 359 1.819632 GGCTTCCTGGCATGGTACG 60.820 63.158 0.00 0.00 41.37 3.67
360 361 0.177141 GCTTCCTGGCATGGTACGTA 59.823 55.000 0.00 0.00 0.00 3.57
363 364 1.881252 CCTGGCATGGTACGTACGC 60.881 63.158 16.72 16.07 0.00 4.42
379 380 3.242091 CGTACGCAGTTTCTTGATGGATG 60.242 47.826 0.52 0.00 37.78 3.51
410 411 2.665777 GCAATGCTGCTTGCTGATG 58.334 52.632 21.41 5.13 46.32 3.07
411 412 0.172578 GCAATGCTGCTTGCTGATGA 59.827 50.000 21.41 0.00 46.32 2.92
412 413 1.403647 GCAATGCTGCTTGCTGATGAA 60.404 47.619 21.41 0.00 46.32 2.57
413 414 2.259618 CAATGCTGCTTGCTGATGAAC 58.740 47.619 0.00 0.00 43.37 3.18
418 419 0.886043 TGCTTGCTGATGAACTGCGT 60.886 50.000 0.00 0.00 44.53 5.24
440 441 6.183359 GCGTGATTCGTTTATTTTGAGTTGTC 60.183 38.462 0.00 0.00 42.13 3.18
443 444 8.682016 GTGATTCGTTTATTTTGAGTTGTCTTG 58.318 33.333 0.00 0.00 0.00 3.02
444 445 8.402472 TGATTCGTTTATTTTGAGTTGTCTTGT 58.598 29.630 0.00 0.00 0.00 3.16
445 446 8.782533 ATTCGTTTATTTTGAGTTGTCTTGTC 57.217 30.769 0.00 0.00 0.00 3.18
446 447 6.721321 TCGTTTATTTTGAGTTGTCTTGTCC 58.279 36.000 0.00 0.00 0.00 4.02
458 459 1.075601 TCTTGTCCATCCAAGGCCTT 58.924 50.000 13.78 13.78 41.72 4.35
459 460 1.180029 CTTGTCCATCCAAGGCCTTG 58.820 55.000 34.60 34.60 38.51 3.61
502 504 1.454479 CATGTGGGAGTGGGGCATC 60.454 63.158 0.00 0.00 0.00 3.91
515 517 1.145819 GGCATCTCTGTGCTCCTCC 59.854 63.158 0.00 0.00 44.45 4.30
516 518 1.336632 GGCATCTCTGTGCTCCTCCT 61.337 60.000 0.00 0.00 44.45 3.69
517 519 0.104671 GCATCTCTGTGCTCCTCCTC 59.895 60.000 0.00 0.00 41.82 3.71
563 565 2.742053 TGCACGCCTTAATCTCACTTTC 59.258 45.455 0.00 0.00 0.00 2.62
577 579 3.620488 TCACTTTCCCCACTTGCATATC 58.380 45.455 0.00 0.00 0.00 1.63
583 585 1.409241 CCCCACTTGCATATCAGTGCT 60.409 52.381 10.23 0.00 45.27 4.40
586 588 2.479049 CCACTTGCATATCAGTGCTTGC 60.479 50.000 10.23 5.21 45.27 4.01
609 611 4.701651 CCATGAGCATTTCTTTGTACCTGA 59.298 41.667 0.00 0.00 0.00 3.86
623 625 8.304596 TCTTTGTACCTGAACAAGTGTAGATAG 58.695 37.037 0.00 0.00 40.29 2.08
667 671 7.891183 ATACCATCGCTAGTTTCATGTAATC 57.109 36.000 0.00 0.00 0.00 1.75
668 672 5.918608 ACCATCGCTAGTTTCATGTAATCT 58.081 37.500 0.00 0.00 0.00 2.40
733 740 0.116940 AAACCATGGGATGTTGGGCT 59.883 50.000 18.09 0.00 37.32 5.19
791 798 7.311092 TGGATAATTACTTGACATATCGGGT 57.689 36.000 0.00 0.00 0.00 5.28
800 807 4.499037 TGACATATCGGGTACTCAATCG 57.501 45.455 0.00 0.00 0.00 3.34
814 821 4.668289 ACTCAATCGTTTCTTTTGCGTTT 58.332 34.783 0.00 0.00 0.00 3.60
834 841 6.590357 CGTTTAGTTCATTTCCACTGTACTG 58.410 40.000 0.00 0.00 0.00 2.74
835 842 6.202188 CGTTTAGTTCATTTCCACTGTACTGT 59.798 38.462 0.00 0.00 0.00 3.55
836 843 7.383029 CGTTTAGTTCATTTCCACTGTACTGTA 59.617 37.037 4.96 0.00 0.00 2.74
837 844 8.493547 GTTTAGTTCATTTCCACTGTACTGTAC 58.506 37.037 10.98 10.98 0.00 2.90
838 845 6.420913 AGTTCATTTCCACTGTACTGTACT 57.579 37.500 17.98 0.51 0.00 2.73
839 846 6.827727 AGTTCATTTCCACTGTACTGTACTT 58.172 36.000 17.98 3.52 0.00 2.24
879 886 1.506493 GGCTGCTCTATTCCATGTCG 58.494 55.000 0.00 0.00 0.00 4.35
880 887 1.506493 GCTGCTCTATTCCATGTCGG 58.494 55.000 0.00 0.00 0.00 4.79
1038 1045 6.614906 ACTCAGACAGGGATGATATCTTCTTT 59.385 38.462 15.90 4.68 0.00 2.52
1128 1135 0.536724 GATTGGCGCCAAGGGAATTT 59.463 50.000 41.38 26.38 39.47 1.82
1203 1210 2.908263 TCCTGGAGGGAATGGGATTA 57.092 50.000 0.00 0.00 41.91 1.75
1242 1249 6.176183 CACTAAAGTGGATCTTCCTCAATGT 58.824 40.000 2.01 0.00 42.10 2.71
1368 1375 3.524606 GATGCCGCCTGCTGCATT 61.525 61.111 19.63 6.38 44.65 3.56
1494 1501 4.532834 TGGAGTTTGAAAGCTTAGTTGGT 58.467 39.130 0.00 0.00 0.00 3.67
1536 1543 8.947940 CAAAAGTTATTACGAAGAGCATATTGC 58.052 33.333 0.00 0.00 45.46 3.56
1788 1795 5.870978 GGCTCACAACGGTTTAATTAGAGTA 59.129 40.000 0.00 0.00 0.00 2.59
1851 1858 4.130118 GTGAGGACTGTGTTGTGAGAATT 58.870 43.478 0.00 0.00 0.00 2.17
1872 1879 3.334583 TGGCAGATTACAGAAGTGGAC 57.665 47.619 0.00 0.00 0.00 4.02
1906 1913 1.080498 TGTATGGGGGAGAGAACCACT 59.920 52.381 0.00 0.00 37.05 4.00
1952 1959 9.457436 AATTAAAATCCTAAAACCGAAGCTAGA 57.543 29.630 0.00 0.00 0.00 2.43
2019 2026 3.877559 TCACATTACAGAGAGCCCATTG 58.122 45.455 0.00 0.00 0.00 2.82
2028 2035 2.693591 AGAGAGCCCATTGCATGAATTG 59.306 45.455 0.00 0.00 44.83 2.32
2117 2124 7.561722 TGGTTCTCTAGAGCTATCACATTACTT 59.438 37.037 15.35 0.00 0.00 2.24
2293 2307 7.038729 ACCTCATCAAAAGATAAGACAGTCAGA 60.039 37.037 2.66 0.00 0.00 3.27
2509 2523 5.046448 AGCCATTGCAGTTTCAATATTTCCA 60.046 36.000 0.00 0.00 41.13 3.53
2512 2526 7.042950 CCATTGCAGTTTCAATATTTCCATGA 58.957 34.615 0.00 0.00 35.12 3.07
2555 2569 1.388547 AATTGCCAACAGTGACGTGT 58.611 45.000 0.00 0.00 0.00 4.49
2634 2648 3.689649 AGTTCGCATTTGGGATGTTCTAC 59.310 43.478 0.00 0.00 36.86 2.59
2672 2686 1.922447 TGGGCTGATACCAGGAATGTT 59.078 47.619 0.00 0.00 40.72 2.71
2768 2782 7.095229 TGCATTACCGAATACTAATTCATGCTC 60.095 37.037 15.89 0.00 42.55 4.26
2770 2784 8.651588 CATTACCGAATACTAATTCATGCTCTC 58.348 37.037 0.00 0.00 41.44 3.20
2847 2861 7.147897 ACGATCAATCAGGTACATAGAAGTCAA 60.148 37.037 0.00 0.00 0.00 3.18
3247 3261 4.526970 TCCATCCTTCATTGGCTTAGAAC 58.473 43.478 0.00 0.00 32.80 3.01
3251 3265 4.394729 TCCTTCATTGGCTTAGAACGTTT 58.605 39.130 0.46 0.00 0.00 3.60
3273 3287 5.232610 TCCGTTTTCACATGTTTACGTTT 57.767 34.783 0.00 0.00 0.00 3.60
3279 3293 7.112844 CGTTTTCACATGTTTACGTTTCATGAT 59.887 33.333 23.69 11.94 40.64 2.45
3307 3321 4.396166 GTGATCCTAACACCATCCTTTGTG 59.604 45.833 0.00 0.00 38.44 3.33
3388 3402 7.843252 TCAGATGGCAGATATCTTATATCCACT 59.157 37.037 1.33 4.11 32.75 4.00
3451 3465 1.302033 CAGCGCCTCACAGAAAGGT 60.302 57.895 2.29 0.00 36.21 3.50
3472 3486 1.004927 GAAGCCAAATCGGTTCGATCG 60.005 52.381 9.36 9.36 46.30 3.69
3601 3618 2.822255 GCTTTACGCCGCCATGGA 60.822 61.111 18.40 0.00 42.00 3.41
3602 3619 2.823829 GCTTTACGCCGCCATGGAG 61.824 63.158 18.40 13.36 44.31 3.86
3637 3654 1.361668 CTGGGACATGGTTCTTCGCG 61.362 60.000 0.00 0.00 38.20 5.87
3769 3786 1.589196 GGTGATAGTGACGGCGAGC 60.589 63.158 16.62 5.63 0.00 5.03
3817 3834 2.048597 TACGGCTTGCCTGTGACG 60.049 61.111 10.12 0.00 34.16 4.35
3826 3843 1.227556 GCCTGTGACGTTGTGAGGT 60.228 57.895 0.00 0.00 0.00 3.85
3843 3860 5.472137 TGTGAGGTTGTAAGCTTTGGTTATC 59.528 40.000 3.20 0.00 36.78 1.75
3844 3861 5.472137 GTGAGGTTGTAAGCTTTGGTTATCA 59.528 40.000 3.20 0.47 36.78 2.15
3845 3862 5.472137 TGAGGTTGTAAGCTTTGGTTATCAC 59.528 40.000 3.20 0.00 36.78 3.06
3849 3866 6.653740 GGTTGTAAGCTTTGGTTATCACTAGT 59.346 38.462 3.20 0.00 0.00 2.57
3905 3922 1.774894 TTCCTCCGGAAGTGTTGGGG 61.775 60.000 5.23 0.00 36.71 4.96
3907 3924 2.122324 TCCGGAAGTGTTGGGGGA 60.122 61.111 0.00 0.00 0.00 4.81
3925 3943 1.700186 GGAGTGGTGGAAGAGAGGTTT 59.300 52.381 0.00 0.00 0.00 3.27
4007 4025 5.011943 AGGAGATTAATCAGTGGAGATGCTC 59.988 44.000 17.56 1.90 0.00 4.26
4064 4087 3.843893 AAGGCCTCAAAATTGTTGCTT 57.156 38.095 5.23 0.00 0.00 3.91
4065 4088 4.953940 AAGGCCTCAAAATTGTTGCTTA 57.046 36.364 5.23 0.00 0.00 3.09
4214 4279 3.831333 TCCTGATGTTTTGGCTGCATTTA 59.169 39.130 0.50 0.00 0.00 1.40
4218 4283 5.609423 TGATGTTTTGGCTGCATTTAAGTT 58.391 33.333 0.50 0.00 0.00 2.66
4224 4289 6.398234 TTTGGCTGCATTTAAGTTCAGTTA 57.602 33.333 0.50 0.00 0.00 2.24
4225 4290 6.588719 TTGGCTGCATTTAAGTTCAGTTAT 57.411 33.333 0.50 0.00 0.00 1.89
4258 4323 1.122019 GGTGACTGGTGAGGTGAGGT 61.122 60.000 0.00 0.00 0.00 3.85
4276 4341 2.359975 CTCCCACCGGTTGCTTCC 60.360 66.667 2.97 0.00 0.00 3.46
4283 4348 0.535102 ACCGGTTGCTTCCAGACTTG 60.535 55.000 0.00 0.00 0.00 3.16
4316 4381 0.179215 GTGCTTGTTGCGATTCTCCG 60.179 55.000 0.00 0.00 46.63 4.63
4415 4480 2.861147 AAAGCTCCAACCCTAGTCAC 57.139 50.000 0.00 0.00 0.00 3.67
4486 4555 2.478514 CGCCCCATTTTAAAGTTGCAAC 59.521 45.455 22.17 22.17 0.00 4.17
4585 4656 1.611977 CAACAGTGAGTGACGGGTCTA 59.388 52.381 0.00 0.00 0.00 2.59
4653 4725 6.553953 TCTTCTATTAACCATGGTGCTACA 57.446 37.500 20.60 0.82 0.00 2.74
4654 4726 6.953101 TCTTCTATTAACCATGGTGCTACAA 58.047 36.000 20.60 8.27 0.00 2.41
4655 4727 7.047891 TCTTCTATTAACCATGGTGCTACAAG 58.952 38.462 20.60 15.72 0.00 3.16
4656 4728 5.680619 TCTATTAACCATGGTGCTACAAGG 58.319 41.667 20.60 4.69 35.43 3.61
4657 4729 2.799126 TAACCATGGTGCTACAAGGG 57.201 50.000 20.60 1.16 33.66 3.95
4658 4730 0.039618 AACCATGGTGCTACAAGGGG 59.960 55.000 20.60 0.00 33.66 4.79
4659 4731 0.844661 ACCATGGTGCTACAAGGGGA 60.845 55.000 18.99 0.00 33.66 4.81
4664 4736 0.036294 GGTGCTACAAGGGGAGTGTC 60.036 60.000 0.00 0.00 0.00 3.67
4674 4746 1.186267 GGGGAGTGTCTGGTTCTCGT 61.186 60.000 0.00 0.00 0.00 4.18
4700 4772 3.355378 ACTTTTGCCTGCATAGCATACA 58.645 40.909 11.89 0.00 40.59 2.29
4701 4773 3.763360 ACTTTTGCCTGCATAGCATACAA 59.237 39.130 11.89 2.06 40.59 2.41
4706 4778 4.935702 TGCCTGCATAGCATACAATTTTC 58.064 39.130 7.43 0.00 38.13 2.29
4713 4785 6.762187 TGCATAGCATACAATTTTCAATTGGG 59.238 34.615 5.42 4.51 31.71 4.12
4717 4789 4.333372 GCATACAATTTTCAATTGGGCCTG 59.667 41.667 4.53 0.00 33.56 4.85
4724 4796 0.329261 TCAATTGGGCCTGACTGAGG 59.671 55.000 4.53 0.00 46.13 3.86
4729 4801 0.110486 TGGGCCTGACTGAGGAAAAC 59.890 55.000 4.53 0.00 46.33 2.43
4732 4804 0.868406 GCCTGACTGAGGAAAACACG 59.132 55.000 0.00 0.00 46.33 4.49
4733 4805 1.810412 GCCTGACTGAGGAAAACACGT 60.810 52.381 0.00 0.00 46.33 4.49
4735 4807 2.483013 CCTGACTGAGGAAAACACGTGA 60.483 50.000 25.01 0.00 46.33 4.35
4757 4829 3.915437 AAAACATCCGCACCTAGTTTG 57.085 42.857 0.00 0.00 33.19 2.93
4758 4830 1.821216 AACATCCGCACCTAGTTTGG 58.179 50.000 0.00 0.00 0.00 3.28
4759 4831 0.690762 ACATCCGCACCTAGTTTGGT 59.309 50.000 0.00 0.00 41.77 3.67
4760 4832 1.073284 ACATCCGCACCTAGTTTGGTT 59.927 47.619 0.00 0.00 38.45 3.67
4761 4833 1.468520 CATCCGCACCTAGTTTGGTTG 59.531 52.381 0.00 0.00 38.45 3.77
4762 4834 0.250553 TCCGCACCTAGTTTGGTTGG 60.251 55.000 0.00 0.00 38.45 3.77
4763 4835 1.579429 CGCACCTAGTTTGGTTGGC 59.421 57.895 0.00 0.00 38.45 4.52
4764 4836 0.889186 CGCACCTAGTTTGGTTGGCT 60.889 55.000 0.00 0.00 38.45 4.75
4765 4837 0.598065 GCACCTAGTTTGGTTGGCTG 59.402 55.000 0.00 0.00 38.45 4.85
4766 4838 0.598065 CACCTAGTTTGGTTGGCTGC 59.402 55.000 0.00 0.00 38.45 5.25
4767 4839 0.184933 ACCTAGTTTGGTTGGCTGCA 59.815 50.000 0.50 0.00 36.89 4.41
4768 4840 1.203050 ACCTAGTTTGGTTGGCTGCAT 60.203 47.619 0.50 0.00 36.89 3.96
4769 4841 2.041081 ACCTAGTTTGGTTGGCTGCATA 59.959 45.455 0.50 0.00 36.89 3.14
4770 4842 2.423538 CCTAGTTTGGTTGGCTGCATAC 59.576 50.000 0.50 0.00 0.00 2.39
4771 4843 1.256812 AGTTTGGTTGGCTGCATACC 58.743 50.000 13.56 13.56 0.00 2.73
4772 4844 1.203050 AGTTTGGTTGGCTGCATACCT 60.203 47.619 19.00 1.41 33.05 3.08
4773 4845 1.618343 GTTTGGTTGGCTGCATACCTT 59.382 47.619 19.00 0.00 33.05 3.50
4774 4846 1.544724 TTGGTTGGCTGCATACCTTC 58.455 50.000 19.00 1.26 33.05 3.46
4775 4847 0.698238 TGGTTGGCTGCATACCTTCT 59.302 50.000 19.00 0.00 33.05 2.85
4776 4848 1.912731 TGGTTGGCTGCATACCTTCTA 59.087 47.619 19.00 1.41 33.05 2.10
4777 4849 2.092968 TGGTTGGCTGCATACCTTCTAG 60.093 50.000 19.00 0.00 33.05 2.43
4778 4850 1.943340 GTTGGCTGCATACCTTCTAGC 59.057 52.381 0.50 0.00 0.00 3.42
4779 4851 3.314083 GGCTGCATACCTTCTAGCC 57.686 57.895 0.50 0.00 46.04 3.93
4781 4853 1.876322 GCTGCATACCTTCTAGCCTG 58.124 55.000 0.00 0.00 0.00 4.85
4782 4854 1.876322 CTGCATACCTTCTAGCCTGC 58.124 55.000 0.00 0.00 0.00 4.85
4783 4855 1.139654 CTGCATACCTTCTAGCCTGCA 59.860 52.381 0.00 0.00 37.93 4.41
4784 4856 1.770658 TGCATACCTTCTAGCCTGCAT 59.229 47.619 0.00 0.00 34.92 3.96
4785 4857 2.149578 GCATACCTTCTAGCCTGCATG 58.850 52.381 0.00 0.00 0.00 4.06
4786 4858 2.775890 CATACCTTCTAGCCTGCATGG 58.224 52.381 0.00 0.00 39.35 3.66
4787 4859 2.174685 TACCTTCTAGCCTGCATGGA 57.825 50.000 6.40 0.00 38.35 3.41
4788 4860 0.835941 ACCTTCTAGCCTGCATGGAG 59.164 55.000 7.35 7.35 38.35 3.86
4789 4861 0.534652 CCTTCTAGCCTGCATGGAGC 60.535 60.000 9.03 4.65 45.96 4.70
4790 4862 0.469070 CTTCTAGCCTGCATGGAGCT 59.531 55.000 9.03 11.92 45.94 4.09
4791 4863 0.914644 TTCTAGCCTGCATGGAGCTT 59.085 50.000 9.03 1.32 45.94 3.74
4792 4864 1.793414 TCTAGCCTGCATGGAGCTTA 58.207 50.000 9.03 2.49 45.94 3.09
4793 4865 2.118679 TCTAGCCTGCATGGAGCTTAA 58.881 47.619 9.03 0.00 45.94 1.85
4794 4866 2.158900 TCTAGCCTGCATGGAGCTTAAC 60.159 50.000 9.03 0.00 45.94 2.01
4795 4867 0.745845 AGCCTGCATGGAGCTTAACG 60.746 55.000 9.03 0.00 45.94 3.18
4796 4868 0.744414 GCCTGCATGGAGCTTAACGA 60.744 55.000 9.03 0.00 45.94 3.85
4797 4869 1.737838 CCTGCATGGAGCTTAACGAA 58.262 50.000 9.03 0.00 45.94 3.85
4798 4870 2.083774 CCTGCATGGAGCTTAACGAAA 58.916 47.619 9.03 0.00 45.94 3.46
4799 4871 2.684881 CCTGCATGGAGCTTAACGAAAT 59.315 45.455 9.03 0.00 45.94 2.17
4800 4872 3.488047 CCTGCATGGAGCTTAACGAAATG 60.488 47.826 9.03 0.00 45.94 2.32
4801 4873 3.081061 TGCATGGAGCTTAACGAAATGT 58.919 40.909 0.00 0.00 45.94 2.71
4802 4874 3.119884 TGCATGGAGCTTAACGAAATGTG 60.120 43.478 0.00 0.00 45.94 3.21
4803 4875 3.731867 GCATGGAGCTTAACGAAATGTGG 60.732 47.826 0.00 0.00 41.15 4.17
4804 4876 1.810151 TGGAGCTTAACGAAATGTGGC 59.190 47.619 0.00 0.00 0.00 5.01
4805 4877 1.132453 GGAGCTTAACGAAATGTGGCC 59.868 52.381 0.00 0.00 0.00 5.36
4806 4878 2.084546 GAGCTTAACGAAATGTGGCCT 58.915 47.619 3.32 0.00 0.00 5.19
4807 4879 1.812571 AGCTTAACGAAATGTGGCCTG 59.187 47.619 3.32 0.00 0.00 4.85
4808 4880 1.539827 GCTTAACGAAATGTGGCCTGT 59.460 47.619 3.32 0.00 0.00 4.00
4809 4881 2.030274 GCTTAACGAAATGTGGCCTGTT 60.030 45.455 3.32 0.10 0.00 3.16
4810 4882 3.552068 GCTTAACGAAATGTGGCCTGTTT 60.552 43.478 3.32 1.94 0.00 2.83
4811 4883 2.507339 AACGAAATGTGGCCTGTTTG 57.493 45.000 3.32 0.00 0.00 2.93
4812 4884 0.673437 ACGAAATGTGGCCTGTTTGG 59.327 50.000 3.32 6.43 39.35 3.28
4813 4885 0.673437 CGAAATGTGGCCTGTTTGGT 59.327 50.000 3.32 0.00 38.35 3.67
4814 4886 1.068434 CGAAATGTGGCCTGTTTGGTT 59.932 47.619 3.32 0.00 38.35 3.67
4815 4887 2.482864 GAAATGTGGCCTGTTTGGTTG 58.517 47.619 3.32 0.00 38.35 3.77
4816 4888 0.106521 AATGTGGCCTGTTTGGTTGC 59.893 50.000 3.32 0.00 38.35 4.17
4817 4889 1.757423 ATGTGGCCTGTTTGGTTGCC 61.757 55.000 3.32 0.00 44.27 4.52
4818 4890 2.841988 TGGCCTGTTTGGTTGCCC 60.842 61.111 3.32 0.00 43.35 5.36
4819 4891 3.989787 GGCCTGTTTGGTTGCCCG 61.990 66.667 0.00 0.00 37.94 6.13
4820 4892 4.662961 GCCTGTTTGGTTGCCCGC 62.663 66.667 0.00 0.00 38.35 6.13
4821 4893 2.912025 CCTGTTTGGTTGCCCGCT 60.912 61.111 0.00 0.00 0.00 5.52
4822 4894 2.498056 CCTGTTTGGTTGCCCGCTT 61.498 57.895 0.00 0.00 0.00 4.68
4823 4895 1.300080 CTGTTTGGTTGCCCGCTTG 60.300 57.895 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.134804 CCTGAACCCCTCATTACTGGTAG 59.865 52.174 0.00 0.00 32.14 3.18
3 4 1.916181 ACCTGAACCCCTCATTACTGG 59.084 52.381 0.00 0.00 32.14 4.00
4 5 3.009033 TGAACCTGAACCCCTCATTACTG 59.991 47.826 0.00 0.00 32.14 2.74
5 6 3.256704 TGAACCTGAACCCCTCATTACT 58.743 45.455 0.00 0.00 32.14 2.24
6 7 3.713826 TGAACCTGAACCCCTCATTAC 57.286 47.619 0.00 0.00 32.14 1.89
7 8 3.396276 TGTTGAACCTGAACCCCTCATTA 59.604 43.478 0.00 0.00 32.14 1.90
8 9 2.176798 TGTTGAACCTGAACCCCTCATT 59.823 45.455 0.00 0.00 32.14 2.57
9 10 1.780309 TGTTGAACCTGAACCCCTCAT 59.220 47.619 0.00 0.00 32.14 2.90
10 11 1.142870 CTGTTGAACCTGAACCCCTCA 59.857 52.381 0.00 0.00 0.00 3.86
11 12 1.545651 CCTGTTGAACCTGAACCCCTC 60.546 57.143 0.00 0.00 0.00 4.30
12 13 0.478507 CCTGTTGAACCTGAACCCCT 59.521 55.000 0.00 0.00 0.00 4.79
13 14 0.539669 CCCTGTTGAACCTGAACCCC 60.540 60.000 0.00 0.00 0.00 4.95
14 15 0.539669 CCCCTGTTGAACCTGAACCC 60.540 60.000 0.00 0.00 0.00 4.11
15 16 0.539669 CCCCCTGTTGAACCTGAACC 60.540 60.000 0.00 0.00 0.00 3.62
16 17 1.179174 GCCCCCTGTTGAACCTGAAC 61.179 60.000 0.00 0.00 0.00 3.18
17 18 1.152830 GCCCCCTGTTGAACCTGAA 59.847 57.895 0.00 0.00 0.00 3.02
18 19 2.067932 CTGCCCCCTGTTGAACCTGA 62.068 60.000 0.00 0.00 0.00 3.86
19 20 1.604593 CTGCCCCCTGTTGAACCTG 60.605 63.158 0.00 0.00 0.00 4.00
20 21 1.142688 ATCTGCCCCCTGTTGAACCT 61.143 55.000 0.00 0.00 0.00 3.50
21 22 0.251787 AATCTGCCCCCTGTTGAACC 60.252 55.000 0.00 0.00 0.00 3.62
22 23 1.177401 GAATCTGCCCCCTGTTGAAC 58.823 55.000 0.00 0.00 0.00 3.18
23 24 0.776810 TGAATCTGCCCCCTGTTGAA 59.223 50.000 0.00 0.00 0.00 2.69
24 25 1.002069 ATGAATCTGCCCCCTGTTGA 58.998 50.000 0.00 0.00 0.00 3.18
25 26 1.108776 CATGAATCTGCCCCCTGTTG 58.891 55.000 0.00 0.00 0.00 3.33
26 27 0.032813 CCATGAATCTGCCCCCTGTT 60.033 55.000 0.00 0.00 0.00 3.16
27 28 0.920763 TCCATGAATCTGCCCCCTGT 60.921 55.000 0.00 0.00 0.00 4.00
28 29 0.178998 CTCCATGAATCTGCCCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
29 30 0.625683 ACTCCATGAATCTGCCCCCT 60.626 55.000 0.00 0.00 0.00 4.79
30 31 1.140312 TACTCCATGAATCTGCCCCC 58.860 55.000 0.00 0.00 0.00 5.40
31 32 1.771255 AGTACTCCATGAATCTGCCCC 59.229 52.381 0.00 0.00 0.00 5.80
32 33 3.118261 TGAAGTACTCCATGAATCTGCCC 60.118 47.826 0.00 0.00 0.00 5.36
33 34 3.873952 GTGAAGTACTCCATGAATCTGCC 59.126 47.826 0.00 0.00 0.00 4.85
34 35 4.569966 CAGTGAAGTACTCCATGAATCTGC 59.430 45.833 0.00 0.00 37.60 4.26
35 36 4.569966 GCAGTGAAGTACTCCATGAATCTG 59.430 45.833 0.00 0.00 37.60 2.90
36 37 4.383552 GGCAGTGAAGTACTCCATGAATCT 60.384 45.833 0.00 0.00 37.60 2.40
37 38 3.873952 GGCAGTGAAGTACTCCATGAATC 59.126 47.826 0.00 0.00 37.60 2.52
38 39 3.264193 TGGCAGTGAAGTACTCCATGAAT 59.736 43.478 0.00 0.00 37.60 2.57
39 40 2.637382 TGGCAGTGAAGTACTCCATGAA 59.363 45.455 0.00 0.00 37.60 2.57
40 41 2.234661 CTGGCAGTGAAGTACTCCATGA 59.765 50.000 6.28 0.00 37.60 3.07
41 42 2.027745 ACTGGCAGTGAAGTACTCCATG 60.028 50.000 21.37 0.00 37.60 3.66
42 43 2.260822 ACTGGCAGTGAAGTACTCCAT 58.739 47.619 21.37 0.00 37.60 3.41
43 44 1.717032 ACTGGCAGTGAAGTACTCCA 58.283 50.000 21.37 0.00 37.60 3.86
62 63 2.627699 GGATTTTCTTCAGTGGTTGCCA 59.372 45.455 0.00 0.00 0.00 4.92
63 64 2.893489 AGGATTTTCTTCAGTGGTTGCC 59.107 45.455 0.00 0.00 0.00 4.52
64 65 5.183904 ACATAGGATTTTCTTCAGTGGTTGC 59.816 40.000 0.00 0.00 0.00 4.17
65 66 6.402550 CGACATAGGATTTTCTTCAGTGGTTG 60.403 42.308 0.00 0.00 0.00 3.77
66 67 5.643777 CGACATAGGATTTTCTTCAGTGGTT 59.356 40.000 0.00 0.00 0.00 3.67
67 68 5.046591 TCGACATAGGATTTTCTTCAGTGGT 60.047 40.000 0.00 0.00 0.00 4.16
68 69 5.419542 TCGACATAGGATTTTCTTCAGTGG 58.580 41.667 0.00 0.00 0.00 4.00
69 70 6.036517 CCTTCGACATAGGATTTTCTTCAGTG 59.963 42.308 0.00 0.00 34.56 3.66
70 71 6.109359 CCTTCGACATAGGATTTTCTTCAGT 58.891 40.000 0.00 0.00 34.56 3.41
71 72 5.007136 GCCTTCGACATAGGATTTTCTTCAG 59.993 44.000 5.80 0.00 34.56 3.02
72 73 4.876107 GCCTTCGACATAGGATTTTCTTCA 59.124 41.667 5.80 0.00 34.56 3.02
73 74 5.119694 AGCCTTCGACATAGGATTTTCTTC 58.880 41.667 5.80 0.00 34.56 2.87
74 75 5.104259 AGCCTTCGACATAGGATTTTCTT 57.896 39.130 5.80 0.00 34.56 2.52
75 76 4.762289 AGCCTTCGACATAGGATTTTCT 57.238 40.909 5.80 0.00 34.56 2.52
76 77 5.119694 AGAAGCCTTCGACATAGGATTTTC 58.880 41.667 6.59 6.32 41.23 2.29
77 78 5.104259 AGAAGCCTTCGACATAGGATTTT 57.896 39.130 6.59 0.00 41.23 1.82
78 79 4.762289 AGAAGCCTTCGACATAGGATTT 57.238 40.909 6.59 0.07 41.23 2.17
79 80 4.762289 AAGAAGCCTTCGACATAGGATT 57.238 40.909 4.84 4.84 43.67 3.01
80 81 4.762289 AAAGAAGCCTTCGACATAGGAT 57.238 40.909 5.80 0.00 34.56 3.24
81 82 4.253685 CAAAAGAAGCCTTCGACATAGGA 58.746 43.478 5.80 0.00 34.56 2.94
82 83 4.003648 ACAAAAGAAGCCTTCGACATAGG 58.996 43.478 0.00 0.00 35.80 2.57
83 84 4.690748 TCACAAAAGAAGCCTTCGACATAG 59.309 41.667 0.00 0.00 34.02 2.23
84 85 4.637276 TCACAAAAGAAGCCTTCGACATA 58.363 39.130 0.00 0.00 34.02 2.29
85 86 3.476552 TCACAAAAGAAGCCTTCGACAT 58.523 40.909 0.00 0.00 34.02 3.06
86 87 2.912771 TCACAAAAGAAGCCTTCGACA 58.087 42.857 0.00 0.00 34.02 4.35
87 88 3.963383 TTCACAAAAGAAGCCTTCGAC 57.037 42.857 0.00 0.00 34.02 4.20
88 89 4.133820 TCATTCACAAAAGAAGCCTTCGA 58.866 39.130 0.00 0.00 34.02 3.71
89 90 4.488126 TCATTCACAAAAGAAGCCTTCG 57.512 40.909 0.00 0.00 34.02 3.79
90 91 6.758416 ACTTTTCATTCACAAAAGAAGCCTTC 59.242 34.615 11.00 0.00 41.52 3.46
91 92 6.643388 ACTTTTCATTCACAAAAGAAGCCTT 58.357 32.000 11.00 0.00 41.52 4.35
92 93 6.225981 ACTTTTCATTCACAAAAGAAGCCT 57.774 33.333 11.00 0.00 41.52 4.58
93 94 6.908870 AACTTTTCATTCACAAAAGAAGCC 57.091 33.333 11.00 0.00 41.52 4.35
94 95 8.868916 TGTAAACTTTTCATTCACAAAAGAAGC 58.131 29.630 11.00 0.00 41.52 3.86
121 122 9.677567 GCATTTACAAGTCAGTTTTCATAAAGA 57.322 29.630 0.00 0.00 0.00 2.52
122 123 8.915654 GGCATTTACAAGTCAGTTTTCATAAAG 58.084 33.333 0.00 0.00 0.00 1.85
123 124 8.417106 TGGCATTTACAAGTCAGTTTTCATAAA 58.583 29.630 0.00 0.00 0.00 1.40
124 125 7.946207 TGGCATTTACAAGTCAGTTTTCATAA 58.054 30.769 0.00 0.00 0.00 1.90
125 126 7.309133 CCTGGCATTTACAAGTCAGTTTTCATA 60.309 37.037 0.00 0.00 0.00 2.15
126 127 6.403866 TGGCATTTACAAGTCAGTTTTCAT 57.596 33.333 0.00 0.00 0.00 2.57
127 128 5.221224 CCTGGCATTTACAAGTCAGTTTTCA 60.221 40.000 0.00 0.00 0.00 2.69
128 129 5.221244 ACCTGGCATTTACAAGTCAGTTTTC 60.221 40.000 0.00 0.00 0.00 2.29
129 130 4.649218 ACCTGGCATTTACAAGTCAGTTTT 59.351 37.500 0.00 0.00 0.00 2.43
130 131 4.215109 ACCTGGCATTTACAAGTCAGTTT 58.785 39.130 0.00 0.00 0.00 2.66
131 132 3.832527 ACCTGGCATTTACAAGTCAGTT 58.167 40.909 0.00 0.00 0.00 3.16
132 133 3.508845 ACCTGGCATTTACAAGTCAGT 57.491 42.857 0.00 0.00 0.00 3.41
133 134 4.853924 AAACCTGGCATTTACAAGTCAG 57.146 40.909 0.00 0.00 0.00 3.51
134 135 5.772672 ACATAAACCTGGCATTTACAAGTCA 59.227 36.000 0.00 0.00 0.00 3.41
135 136 6.267496 ACATAAACCTGGCATTTACAAGTC 57.733 37.500 0.00 0.00 0.00 3.01
136 137 7.450323 AGTTACATAAACCTGGCATTTACAAGT 59.550 33.333 0.00 0.00 39.03 3.16
137 138 7.826690 AGTTACATAAACCTGGCATTTACAAG 58.173 34.615 0.00 0.00 39.03 3.16
138 139 7.768807 AGTTACATAAACCTGGCATTTACAA 57.231 32.000 0.00 0.00 39.03 2.41
139 140 8.865420 TTAGTTACATAAACCTGGCATTTACA 57.135 30.769 0.00 0.00 39.03 2.41
142 143 9.483916 GTTTTTAGTTACATAAACCTGGCATTT 57.516 29.630 0.00 0.00 39.03 2.32
143 144 8.866093 AGTTTTTAGTTACATAAACCTGGCATT 58.134 29.630 0.00 0.00 39.03 3.56
144 145 8.417273 AGTTTTTAGTTACATAAACCTGGCAT 57.583 30.769 0.00 0.00 39.03 4.40
145 146 7.502895 TGAGTTTTTAGTTACATAAACCTGGCA 59.497 33.333 0.00 0.00 39.03 4.92
146 147 7.878036 TGAGTTTTTAGTTACATAAACCTGGC 58.122 34.615 0.00 0.00 39.03 4.85
147 148 9.280174 TCTGAGTTTTTAGTTACATAAACCTGG 57.720 33.333 0.00 0.00 39.03 4.45
156 157 9.607988 TCATTCAAGTCTGAGTTTTTAGTTACA 57.392 29.630 0.00 0.00 31.69 2.41
159 160 9.956720 CATTCATTCAAGTCTGAGTTTTTAGTT 57.043 29.630 0.00 0.00 31.69 2.24
160 161 8.078596 GCATTCATTCAAGTCTGAGTTTTTAGT 58.921 33.333 0.00 0.00 31.69 2.24
161 162 8.295288 AGCATTCATTCAAGTCTGAGTTTTTAG 58.705 33.333 0.00 0.00 31.69 1.85
162 163 8.169977 AGCATTCATTCAAGTCTGAGTTTTTA 57.830 30.769 0.00 0.00 31.69 1.52
163 164 7.047460 AGCATTCATTCAAGTCTGAGTTTTT 57.953 32.000 0.00 0.00 31.69 1.94
164 165 6.645790 AGCATTCATTCAAGTCTGAGTTTT 57.354 33.333 0.00 0.00 31.69 2.43
165 166 6.645790 AAGCATTCATTCAAGTCTGAGTTT 57.354 33.333 0.00 0.00 31.69 2.66
166 167 7.392673 ACATAAGCATTCATTCAAGTCTGAGTT 59.607 33.333 0.00 0.00 31.69 3.01
167 168 6.883217 ACATAAGCATTCATTCAAGTCTGAGT 59.117 34.615 0.00 0.00 31.69 3.41
168 169 7.317842 ACATAAGCATTCATTCAAGTCTGAG 57.682 36.000 0.00 0.00 31.69 3.35
169 170 7.692460 AACATAAGCATTCATTCAAGTCTGA 57.308 32.000 0.00 0.00 0.00 3.27
170 171 8.453320 TGTAACATAAGCATTCATTCAAGTCTG 58.547 33.333 0.00 0.00 0.00 3.51
171 172 8.565896 TGTAACATAAGCATTCATTCAAGTCT 57.434 30.769 0.00 0.00 0.00 3.24
172 173 9.793252 AATGTAACATAAGCATTCATTCAAGTC 57.207 29.630 0.00 0.00 0.00 3.01
185 186 9.691362 CCCCAAAATATGTAATGTAACATAAGC 57.309 33.333 1.21 0.00 43.59 3.09
189 190 9.881773 AGATCCCCAAAATATGTAATGTAACAT 57.118 29.630 0.00 0.00 42.62 2.71
193 194 8.107095 GCCTAGATCCCCAAAATATGTAATGTA 58.893 37.037 0.00 0.00 0.00 2.29
194 195 6.948309 GCCTAGATCCCCAAAATATGTAATGT 59.052 38.462 0.00 0.00 0.00 2.71
195 196 6.947733 TGCCTAGATCCCCAAAATATGTAATG 59.052 38.462 0.00 0.00 0.00 1.90
196 197 6.948309 GTGCCTAGATCCCCAAAATATGTAAT 59.052 38.462 0.00 0.00 0.00 1.89
197 198 6.126332 TGTGCCTAGATCCCCAAAATATGTAA 60.126 38.462 0.00 0.00 0.00 2.41
198 199 5.371176 TGTGCCTAGATCCCCAAAATATGTA 59.629 40.000 0.00 0.00 0.00 2.29
199 200 4.167892 TGTGCCTAGATCCCCAAAATATGT 59.832 41.667 0.00 0.00 0.00 2.29
200 201 4.728772 TGTGCCTAGATCCCCAAAATATG 58.271 43.478 0.00 0.00 0.00 1.78
201 202 4.416848 ACTGTGCCTAGATCCCCAAAATAT 59.583 41.667 0.00 0.00 0.00 1.28
202 203 3.785887 ACTGTGCCTAGATCCCCAAAATA 59.214 43.478 0.00 0.00 0.00 1.40
203 204 2.582636 ACTGTGCCTAGATCCCCAAAAT 59.417 45.455 0.00 0.00 0.00 1.82
204 205 1.992557 ACTGTGCCTAGATCCCCAAAA 59.007 47.619 0.00 0.00 0.00 2.44
205 206 1.281867 CACTGTGCCTAGATCCCCAAA 59.718 52.381 0.00 0.00 0.00 3.28
206 207 0.911769 CACTGTGCCTAGATCCCCAA 59.088 55.000 0.00 0.00 0.00 4.12
207 208 0.042581 TCACTGTGCCTAGATCCCCA 59.957 55.000 2.12 0.00 0.00 4.96
208 209 0.466124 GTCACTGTGCCTAGATCCCC 59.534 60.000 2.12 0.00 0.00 4.81
209 210 1.490574 AGTCACTGTGCCTAGATCCC 58.509 55.000 2.12 0.00 0.00 3.85
210 211 2.234908 ACAAGTCACTGTGCCTAGATCC 59.765 50.000 2.12 0.00 0.00 3.36
211 212 3.601443 ACAAGTCACTGTGCCTAGATC 57.399 47.619 2.12 0.00 0.00 2.75
212 213 4.528596 ACTTACAAGTCACTGTGCCTAGAT 59.471 41.667 2.12 0.00 32.86 1.98
213 214 3.895656 ACTTACAAGTCACTGTGCCTAGA 59.104 43.478 2.12 0.00 32.86 2.43
214 215 3.990469 CACTTACAAGTCACTGTGCCTAG 59.010 47.826 2.12 0.00 37.08 3.02
215 216 3.386726 ACACTTACAAGTCACTGTGCCTA 59.613 43.478 2.12 0.00 37.08 3.93
216 217 2.170607 ACACTTACAAGTCACTGTGCCT 59.829 45.455 2.12 0.00 37.08 4.75
217 218 2.544267 GACACTTACAAGTCACTGTGCC 59.456 50.000 2.12 0.00 37.08 5.01
218 219 3.194861 TGACACTTACAAGTCACTGTGC 58.805 45.455 2.12 0.00 39.65 4.57
219 220 3.804325 CCTGACACTTACAAGTCACTGTG 59.196 47.826 0.17 0.17 39.65 3.66
220 221 3.451178 ACCTGACACTTACAAGTCACTGT 59.549 43.478 0.00 0.00 39.65 3.55
221 222 4.060038 ACCTGACACTTACAAGTCACTG 57.940 45.455 0.00 0.00 39.65 3.66
222 223 4.755266 AACCTGACACTTACAAGTCACT 57.245 40.909 0.00 0.00 39.65 3.41
223 224 6.537660 ACTTAAACCTGACACTTACAAGTCAC 59.462 38.462 0.00 0.00 39.65 3.67
224 225 6.646267 ACTTAAACCTGACACTTACAAGTCA 58.354 36.000 0.00 0.00 42.06 3.41
225 226 8.546244 GTTACTTAAACCTGACACTTACAAGTC 58.454 37.037 0.00 0.00 32.42 3.01
226 227 8.262933 AGTTACTTAAACCTGACACTTACAAGT 58.737 33.333 0.00 0.00 39.03 3.16
227 228 8.658499 AGTTACTTAAACCTGACACTTACAAG 57.342 34.615 0.00 0.00 39.03 3.16
231 232 9.264719 GCTTAAGTTACTTAAACCTGACACTTA 57.735 33.333 16.89 0.00 39.03 2.24
232 233 7.771826 TGCTTAAGTTACTTAAACCTGACACTT 59.228 33.333 16.89 0.00 39.03 3.16
233 234 7.226128 GTGCTTAAGTTACTTAAACCTGACACT 59.774 37.037 16.89 0.00 39.03 3.55
234 235 7.011669 TGTGCTTAAGTTACTTAAACCTGACAC 59.988 37.037 16.89 16.09 39.03 3.67
235 236 7.049133 TGTGCTTAAGTTACTTAAACCTGACA 58.951 34.615 16.89 10.88 39.03 3.58
236 237 7.486802 TGTGCTTAAGTTACTTAAACCTGAC 57.513 36.000 16.89 8.86 39.03 3.51
237 238 7.771826 ACTTGTGCTTAAGTTACTTAAACCTGA 59.228 33.333 16.89 4.93 37.62 3.86
238 239 7.927048 ACTTGTGCTTAAGTTACTTAAACCTG 58.073 34.615 16.89 7.92 37.62 4.00
239 240 8.403236 CAACTTGTGCTTAAGTTACTTAAACCT 58.597 33.333 16.89 0.00 46.19 3.50
240 241 7.646526 CCAACTTGTGCTTAAGTTACTTAAACC 59.353 37.037 16.89 11.82 46.19 3.27
241 242 8.400186 TCCAACTTGTGCTTAAGTTACTTAAAC 58.600 33.333 16.89 13.55 46.19 2.01
242 243 8.508883 TCCAACTTGTGCTTAAGTTACTTAAA 57.491 30.769 16.89 2.61 46.19 1.52
243 244 7.771826 ACTCCAACTTGTGCTTAAGTTACTTAA 59.228 33.333 15.61 15.61 46.19 1.85
244 245 7.277396 ACTCCAACTTGTGCTTAAGTTACTTA 58.723 34.615 15.30 0.03 46.19 2.24
245 246 6.120220 ACTCCAACTTGTGCTTAAGTTACTT 58.880 36.000 15.30 2.32 46.19 2.24
246 247 5.681639 ACTCCAACTTGTGCTTAAGTTACT 58.318 37.500 15.30 0.00 46.19 2.24
247 248 6.147328 CCTACTCCAACTTGTGCTTAAGTTAC 59.853 42.308 15.30 4.85 46.19 2.50
248 249 6.228258 CCTACTCCAACTTGTGCTTAAGTTA 58.772 40.000 15.30 4.48 46.19 2.24
250 251 4.505039 CCCTACTCCAACTTGTGCTTAAGT 60.505 45.833 4.02 1.09 42.43 2.24
251 252 4.003648 CCCTACTCCAACTTGTGCTTAAG 58.996 47.826 0.00 0.00 0.00 1.85
252 253 3.393278 ACCCTACTCCAACTTGTGCTTAA 59.607 43.478 0.00 0.00 0.00 1.85
253 254 2.976882 ACCCTACTCCAACTTGTGCTTA 59.023 45.455 0.00 0.00 0.00 3.09
254 255 1.774856 ACCCTACTCCAACTTGTGCTT 59.225 47.619 0.00 0.00 0.00 3.91
255 256 1.435256 ACCCTACTCCAACTTGTGCT 58.565 50.000 0.00 0.00 0.00 4.40
256 257 2.271944 AACCCTACTCCAACTTGTGC 57.728 50.000 0.00 0.00 0.00 4.57
257 258 3.581332 TCCTAACCCTACTCCAACTTGTG 59.419 47.826 0.00 0.00 0.00 3.33
258 259 3.838903 CTCCTAACCCTACTCCAACTTGT 59.161 47.826 0.00 0.00 0.00 3.16
259 260 3.838903 ACTCCTAACCCTACTCCAACTTG 59.161 47.826 0.00 0.00 0.00 3.16
260 261 4.143406 ACTCCTAACCCTACTCCAACTT 57.857 45.455 0.00 0.00 0.00 2.66
269 270 3.012047 TGACCTAGCAACTCCTAACCCTA 59.988 47.826 0.00 0.00 0.00 3.53
271 272 2.168728 CTGACCTAGCAACTCCTAACCC 59.831 54.545 0.00 0.00 0.00 4.11
283 284 0.553819 TCTCCTCCCTCTGACCTAGC 59.446 60.000 0.00 0.00 0.00 3.42
284 285 1.478654 GCTCTCCTCCCTCTGACCTAG 60.479 61.905 0.00 0.00 0.00 3.02
285 286 0.553819 GCTCTCCTCCCTCTGACCTA 59.446 60.000 0.00 0.00 0.00 3.08
286 287 1.309688 GCTCTCCTCCCTCTGACCT 59.690 63.158 0.00 0.00 0.00 3.85
287 288 1.760480 GGCTCTCCTCCCTCTGACC 60.760 68.421 0.00 0.00 0.00 4.02
288 289 1.042559 CAGGCTCTCCTCCCTCTGAC 61.043 65.000 0.00 0.00 41.93 3.51
289 290 1.309347 CAGGCTCTCCTCCCTCTGA 59.691 63.158 0.00 0.00 41.93 3.27
290 291 1.001503 ACAGGCTCTCCTCCCTCTG 59.998 63.158 0.00 0.00 41.93 3.35
302 303 3.466791 AAGCACAGACGCACAGGCT 62.467 57.895 0.00 0.00 40.36 4.58
304 305 1.889105 ACAAGCACAGACGCACAGG 60.889 57.895 0.00 0.00 0.00 4.00
306 307 1.024046 AACACAAGCACAGACGCACA 61.024 50.000 0.00 0.00 0.00 4.57
311 312 1.067060 GGGGAAAACACAAGCACAGAC 59.933 52.381 0.00 0.00 0.00 3.51
313 314 1.402787 AGGGGAAAACACAAGCACAG 58.597 50.000 0.00 0.00 0.00 3.66
317 318 0.463620 TGCAAGGGGAAAACACAAGC 59.536 50.000 0.00 0.00 0.00 4.01
318 319 2.364970 TGATGCAAGGGGAAAACACAAG 59.635 45.455 0.00 0.00 0.00 3.16
319 320 2.364970 CTGATGCAAGGGGAAAACACAA 59.635 45.455 0.00 0.00 0.00 3.33
320 321 1.962807 CTGATGCAAGGGGAAAACACA 59.037 47.619 0.00 0.00 0.00 3.72
321 322 1.273327 CCTGATGCAAGGGGAAAACAC 59.727 52.381 0.00 0.00 33.28 3.32
322 323 1.631405 CCTGATGCAAGGGGAAAACA 58.369 50.000 0.00 0.00 33.28 2.83
323 324 0.247460 GCCTGATGCAAGGGGAAAAC 59.753 55.000 6.57 0.00 40.77 2.43
324 325 0.114954 AGCCTGATGCAAGGGGAAAA 59.885 50.000 6.57 0.00 44.83 2.29
325 326 0.114954 AAGCCTGATGCAAGGGGAAA 59.885 50.000 6.57 0.00 44.83 3.13
326 327 0.323725 GAAGCCTGATGCAAGGGGAA 60.324 55.000 6.57 0.00 44.83 3.97
327 328 1.304282 GAAGCCTGATGCAAGGGGA 59.696 57.895 6.57 0.00 44.83 4.81
328 329 1.755783 GGAAGCCTGATGCAAGGGG 60.756 63.158 6.57 2.50 44.83 4.79
345 346 1.881252 GCGTACGTACCATGCCAGG 60.881 63.158 19.67 4.52 0.00 4.45
347 348 1.153726 CTGCGTACGTACCATGCCA 60.154 57.895 19.67 8.41 0.00 4.92
349 350 1.060122 GAAACTGCGTACGTACCATGC 59.940 52.381 19.67 16.94 0.00 4.06
358 359 3.932710 TCATCCATCAAGAAACTGCGTAC 59.067 43.478 0.00 0.00 0.00 3.67
360 361 2.744202 GTCATCCATCAAGAAACTGCGT 59.256 45.455 0.00 0.00 0.00 5.24
363 364 4.330250 ACTGGTCATCCATCAAGAAACTG 58.670 43.478 0.00 0.00 43.43 3.16
379 380 2.089980 AGCATTGCAGATCAACTGGTC 58.910 47.619 11.91 0.00 45.82 4.02
410 411 5.849081 TCAAAATAAACGAATCACGCAGTTC 59.151 36.000 0.00 0.00 41.61 3.01
411 412 5.753744 TCAAAATAAACGAATCACGCAGTT 58.246 33.333 0.00 0.00 41.61 3.16
413 414 5.382303 ACTCAAAATAAACGAATCACGCAG 58.618 37.500 0.00 0.00 46.94 5.18
418 419 8.402472 ACAAGACAACTCAAAATAAACGAATCA 58.598 29.630 0.00 0.00 0.00 2.57
440 441 1.180029 CAAGGCCTTGGATGGACAAG 58.820 55.000 34.08 7.65 45.71 3.16
458 459 0.028770 CAACGAAACAAGAAGCGCCA 59.971 50.000 2.29 0.00 0.00 5.69
459 460 0.660300 CCAACGAAACAAGAAGCGCC 60.660 55.000 2.29 0.00 0.00 6.53
462 463 5.938322 TGATAATCCAACGAAACAAGAAGC 58.062 37.500 0.00 0.00 0.00 3.86
466 467 6.029607 CCACATGATAATCCAACGAAACAAG 58.970 40.000 0.00 0.00 0.00 3.16
502 504 0.971959 AGCAGAGGAGGAGCACAGAG 60.972 60.000 0.00 0.00 0.00 3.35
563 565 1.027357 GCACTGATATGCAAGTGGGG 58.973 55.000 16.05 0.00 45.39 4.96
586 588 4.701651 TCAGGTACAAAGAAATGCTCATGG 59.298 41.667 0.00 0.00 0.00 3.66
667 671 9.647797 TGTGTGTACAATTAGATAACCAGTTAG 57.352 33.333 0.00 0.00 32.88 2.34
717 724 0.846015 TCTAGCCCAACATCCCATGG 59.154 55.000 4.14 4.14 36.42 3.66
718 725 2.734755 TTCTAGCCCAACATCCCATG 57.265 50.000 0.00 0.00 0.00 3.66
719 726 4.242811 TCTATTCTAGCCCAACATCCCAT 58.757 43.478 0.00 0.00 0.00 4.00
722 729 5.059833 CAGTTCTATTCTAGCCCAACATCC 58.940 45.833 0.00 0.00 0.00 3.51
726 733 7.988028 ACTTTATCAGTTCTATTCTAGCCCAAC 59.012 37.037 0.00 0.00 27.32 3.77
761 768 6.791887 ATGTCAAGTAATTATCCAGCGATG 57.208 37.500 0.00 0.00 0.00 3.84
771 778 8.467963 TGAGTACCCGATATGTCAAGTAATTA 57.532 34.615 0.00 0.00 0.00 1.40
791 798 5.412526 AACGCAAAAGAAACGATTGAGTA 57.587 34.783 0.00 0.00 36.32 2.59
800 807 7.009723 TGGAAATGAACTAAACGCAAAAGAAAC 59.990 33.333 0.00 0.00 0.00 2.78
814 821 7.534723 AGTACAGTACAGTGGAAATGAACTA 57.465 36.000 13.37 0.00 34.17 2.24
849 856 0.610174 AGAGCAGCCGAGAACATGAA 59.390 50.000 0.00 0.00 0.00 2.57
879 886 2.146073 AACGCAAATGTCAGGCTGCC 62.146 55.000 11.65 11.65 0.00 4.85
880 887 1.005294 CAACGCAAATGTCAGGCTGC 61.005 55.000 10.34 5.78 0.00 5.25
903 910 5.706916 AGTGATCAAAATGTCATCTGCAAC 58.293 37.500 0.00 0.00 0.00 4.17
1038 1045 8.294577 GCTGAACTAATATCATCAAATGCATCA 58.705 33.333 0.00 0.00 0.00 3.07
1116 1123 2.418976 GTCGTACTCAAATTCCCTTGGC 59.581 50.000 0.00 0.00 0.00 4.52
1128 1135 2.550606 GTTTGCCCAAATGTCGTACTCA 59.449 45.455 0.00 0.00 32.36 3.41
1203 1210 6.702329 CACTTTAGTGGAACCTAAGTCATCT 58.298 40.000 1.88 0.00 38.43 2.90
1242 1249 2.568956 AGCACTTGTTATCTCTGCCTGA 59.431 45.455 0.00 0.00 0.00 3.86
1270 1277 0.595095 CTTTCCTGCAAGTCAGCACC 59.405 55.000 0.00 0.00 41.50 5.01
1368 1375 5.136220 TCTCTTTCCACTATCCAGATCCCTA 59.864 44.000 0.00 0.00 0.00 3.53
1494 1501 6.677781 AACTTTTGAACAGATCGAGAAACA 57.322 33.333 0.00 0.00 0.00 2.83
1740 1747 5.221641 CCGGATTTCTTGACCCATATAGACA 60.222 44.000 0.00 0.00 0.00 3.41
1788 1795 3.008049 AGCCAGACGGACTAAACTTCATT 59.992 43.478 0.00 0.00 0.00 2.57
1851 1858 3.674997 GTCCACTTCTGTAATCTGCCAA 58.325 45.455 0.00 0.00 0.00 4.52
1938 1945 2.027100 CCCCTCTTCTAGCTTCGGTTTT 60.027 50.000 0.00 0.00 0.00 2.43
1941 1948 1.331399 GCCCCTCTTCTAGCTTCGGT 61.331 60.000 0.00 0.00 0.00 4.69
2028 2035 0.956633 CATCACCTGTATGGCCATGC 59.043 55.000 29.04 27.15 40.22 4.06
2120 2127 5.648092 GCCAAAATGTAGGTTGAGTATGAGT 59.352 40.000 0.00 0.00 0.00 3.41
2293 2307 3.228188 TCTGAGCCAACTTTCCACAAT 57.772 42.857 0.00 0.00 0.00 2.71
2523 2537 5.495640 TGTTGGCAATTTCAAAGGAAAGTT 58.504 33.333 1.92 0.00 45.58 2.66
2634 2648 1.594293 AGTTGACGACCCGCTTGTG 60.594 57.895 0.00 0.00 0.00 3.33
2672 2686 7.426606 TGGTTGGTAACTAACAGCAGATATA 57.573 36.000 0.00 0.00 32.77 0.86
2750 2764 8.803201 TTACAGAGAGCATGAATTAGTATTCG 57.197 34.615 0.00 0.00 42.55 3.34
2770 2784 7.224362 TGCCAACAACAAAATTCTGATTTACAG 59.776 33.333 0.00 0.00 46.97 2.74
3251 3265 4.879104 AACGTAAACATGTGAAAACGGA 57.121 36.364 19.85 0.00 34.81 4.69
3279 3293 3.706594 GGATGGTGTTAGGATCACTGAGA 59.293 47.826 0.00 0.00 36.25 3.27
3307 3321 1.032114 AAGGCCCTGCATCGTAAAGC 61.032 55.000 0.00 0.00 0.00 3.51
3388 3402 0.994247 AGACATTGGAGTCCATGCCA 59.006 50.000 14.00 0.00 39.34 4.92
3451 3465 2.006888 GATCGAACCGATTTGGCTTCA 58.993 47.619 3.27 0.00 47.00 3.02
3472 3486 3.365364 CCTTGGAGAAGAACATTTCGCAC 60.365 47.826 0.00 0.00 34.02 5.34
3595 3609 0.035056 AACGGCTTTCTCCTCCATGG 60.035 55.000 4.97 4.97 37.10 3.66
3600 3617 4.619852 GGGAACGGCTTTCTCCTC 57.380 61.111 3.61 0.00 34.26 3.71
3637 3654 4.176752 GACCCCCTCATGCCGTCC 62.177 72.222 0.00 0.00 0.00 4.79
3643 3660 1.219124 CGTCACAGACCCCCTCATG 59.781 63.158 0.00 0.00 0.00 3.07
3817 3834 3.380320 ACCAAAGCTTACAACCTCACAAC 59.620 43.478 0.00 0.00 0.00 3.32
3826 3843 8.685838 AAACTAGTGATAACCAAAGCTTACAA 57.314 30.769 0.00 0.00 0.00 2.41
3843 3860 5.181622 AGGTCGTCAGTAGAAGAAACTAGTG 59.818 44.000 0.00 0.00 42.07 2.74
3844 3861 5.315348 AGGTCGTCAGTAGAAGAAACTAGT 58.685 41.667 0.00 0.00 34.06 2.57
3845 3862 5.883503 AGGTCGTCAGTAGAAGAAACTAG 57.116 43.478 0.00 0.00 34.06 2.57
3849 3866 4.583489 ACTCAAGGTCGTCAGTAGAAGAAA 59.417 41.667 0.00 0.00 34.06 2.52
3905 3922 1.353091 AACCTCTCTTCCACCACTCC 58.647 55.000 0.00 0.00 0.00 3.85
3907 3924 1.421646 CCAAACCTCTCTTCCACCACT 59.578 52.381 0.00 0.00 0.00 4.00
4038 4061 5.700373 GCAACAATTTTGAGGCCTTTTCATA 59.300 36.000 6.77 0.00 0.00 2.15
4098 4163 5.914033 TCAACAGGGTTACATATGCTAGTC 58.086 41.667 1.58 0.00 0.00 2.59
4187 4252 1.615392 AGCCAAAACATCAGGACTTGC 59.385 47.619 0.00 0.00 0.00 4.01
4214 4279 6.058183 AGCTTGACTGACAATAACTGAACTT 58.942 36.000 0.00 0.00 37.88 2.66
4258 4323 2.747686 GAAGCAACCGGTGGGAGA 59.252 61.111 8.52 0.00 36.97 3.71
4267 4332 0.595095 CTGCAAGTCTGGAAGCAACC 59.405 55.000 0.00 0.00 36.44 3.77
4283 4348 2.422479 ACAAGCACATGATCATGACTGC 59.578 45.455 36.37 32.85 41.20 4.40
4298 4363 0.320334 TCGGAGAATCGCAACAAGCA 60.320 50.000 0.00 0.00 46.13 3.91
4366 4431 2.143876 AACTCACCAAGTTGGCAAGT 57.856 45.000 22.25 20.50 46.61 3.16
4486 4555 1.201954 CGTCATCAGGAACGTGCAATG 60.202 52.381 0.00 0.00 0.00 2.82
4585 4656 3.068024 CCACAAACAAATACACTGCCTGT 59.932 43.478 0.00 0.00 36.82 4.00
4631 4703 6.260936 CCTTGTAGCACCATGGTTAATAGAAG 59.739 42.308 16.84 19.31 0.00 2.85
4632 4704 6.119536 CCTTGTAGCACCATGGTTAATAGAA 58.880 40.000 16.84 11.67 0.00 2.10
4636 4708 3.627237 CCCCTTGTAGCACCATGGTTAAT 60.627 47.826 16.84 6.56 0.00 1.40
4653 4725 1.353091 GAGAACCAGACACTCCCCTT 58.647 55.000 0.00 0.00 0.00 3.95
4654 4726 0.900647 CGAGAACCAGACACTCCCCT 60.901 60.000 0.00 0.00 0.00 4.79
4655 4727 1.186267 ACGAGAACCAGACACTCCCC 61.186 60.000 0.00 0.00 0.00 4.81
4656 4728 1.473278 CTACGAGAACCAGACACTCCC 59.527 57.143 0.00 0.00 0.00 4.30
4657 4729 1.135344 GCTACGAGAACCAGACACTCC 60.135 57.143 0.00 0.00 0.00 3.85
4658 4730 1.540267 TGCTACGAGAACCAGACACTC 59.460 52.381 0.00 0.00 0.00 3.51
4659 4731 1.617322 TGCTACGAGAACCAGACACT 58.383 50.000 0.00 0.00 0.00 3.55
4664 4736 4.133856 CAAAAGTTGCTACGAGAACCAG 57.866 45.455 0.00 0.00 0.00 4.00
4674 4746 4.372384 TGCTATGCAGGCAAAAGTTGCTA 61.372 43.478 13.61 0.00 44.64 3.49
4692 4764 5.424895 AGGCCCAATTGAAAATTGTATGCTA 59.575 36.000 7.12 0.00 0.00 3.49
4700 4772 3.903090 TCAGTCAGGCCCAATTGAAAATT 59.097 39.130 7.12 0.00 0.00 1.82
4701 4773 3.509442 TCAGTCAGGCCCAATTGAAAAT 58.491 40.909 7.12 0.00 0.00 1.82
4706 4778 0.329261 TCCTCAGTCAGGCCCAATTG 59.671 55.000 0.00 0.00 43.08 2.32
4713 4785 0.868406 CGTGTTTTCCTCAGTCAGGC 59.132 55.000 0.00 0.00 43.08 4.85
4717 4789 4.609691 TTTTCACGTGTTTTCCTCAGTC 57.390 40.909 16.51 0.00 0.00 3.51
4741 4813 1.468520 CAACCAAACTAGGTGCGGATG 59.531 52.381 3.52 0.00 42.25 3.51
4745 4817 0.889186 AGCCAACCAAACTAGGTGCG 60.889 55.000 0.00 0.00 42.25 5.34
4746 4818 0.598065 CAGCCAACCAAACTAGGTGC 59.402 55.000 0.00 0.00 42.25 5.01
4747 4819 0.598065 GCAGCCAACCAAACTAGGTG 59.402 55.000 0.00 0.00 42.25 4.00
4748 4820 0.184933 TGCAGCCAACCAAACTAGGT 59.815 50.000 0.00 0.00 45.91 3.08
4749 4821 1.549203 ATGCAGCCAACCAAACTAGG 58.451 50.000 0.00 0.00 0.00 3.02
4750 4822 2.423538 GGTATGCAGCCAACCAAACTAG 59.576 50.000 8.14 0.00 33.28 2.57
4751 4823 2.041081 AGGTATGCAGCCAACCAAACTA 59.959 45.455 14.16 0.00 35.64 2.24
4752 4824 1.203050 AGGTATGCAGCCAACCAAACT 60.203 47.619 14.16 0.00 35.64 2.66
4753 4825 1.256812 AGGTATGCAGCCAACCAAAC 58.743 50.000 14.16 0.00 35.64 2.93
4754 4826 1.892474 GAAGGTATGCAGCCAACCAAA 59.108 47.619 14.16 0.00 35.64 3.28
4755 4827 1.075374 AGAAGGTATGCAGCCAACCAA 59.925 47.619 14.16 0.00 35.64 3.67
4756 4828 0.698238 AGAAGGTATGCAGCCAACCA 59.302 50.000 14.16 0.00 35.64 3.67
4757 4829 2.565841 CTAGAAGGTATGCAGCCAACC 58.434 52.381 11.97 5.29 0.00 3.77
4758 4830 1.943340 GCTAGAAGGTATGCAGCCAAC 59.057 52.381 11.97 5.87 0.00 3.77
4759 4831 2.332063 GCTAGAAGGTATGCAGCCAA 57.668 50.000 11.97 0.00 0.00 4.52
4761 4833 3.314083 GGCTAGAAGGTATGCAGCC 57.686 57.895 0.00 0.00 44.54 4.85
4762 4834 1.876322 CAGGCTAGAAGGTATGCAGC 58.124 55.000 0.00 0.00 0.00 5.25
4763 4835 1.139654 TGCAGGCTAGAAGGTATGCAG 59.860 52.381 0.00 0.00 38.64 4.41
4764 4836 1.203237 TGCAGGCTAGAAGGTATGCA 58.797 50.000 0.00 0.00 41.05 3.96
4765 4837 2.149578 CATGCAGGCTAGAAGGTATGC 58.850 52.381 0.00 0.00 0.00 3.14
4766 4838 2.369860 TCCATGCAGGCTAGAAGGTATG 59.630 50.000 0.00 0.00 37.29 2.39
4767 4839 2.636893 CTCCATGCAGGCTAGAAGGTAT 59.363 50.000 0.00 0.00 37.29 2.73
4768 4840 2.042464 CTCCATGCAGGCTAGAAGGTA 58.958 52.381 0.00 0.00 37.29 3.08
4769 4841 0.835941 CTCCATGCAGGCTAGAAGGT 59.164 55.000 0.00 0.00 37.29 3.50
4770 4842 0.534652 GCTCCATGCAGGCTAGAAGG 60.535 60.000 0.00 0.00 42.31 3.46
4771 4843 0.469070 AGCTCCATGCAGGCTAGAAG 59.531 55.000 0.00 0.00 45.94 2.85
4772 4844 0.914644 AAGCTCCATGCAGGCTAGAA 59.085 50.000 0.00 0.00 45.94 2.10
4773 4845 1.793414 TAAGCTCCATGCAGGCTAGA 58.207 50.000 0.00 0.00 45.94 2.43
4774 4846 2.216898 GTTAAGCTCCATGCAGGCTAG 58.783 52.381 0.00 0.00 45.94 3.42
4775 4847 1.473257 CGTTAAGCTCCATGCAGGCTA 60.473 52.381 0.00 0.00 45.94 3.93
4776 4848 0.745845 CGTTAAGCTCCATGCAGGCT 60.746 55.000 0.00 0.00 45.94 4.58
4777 4849 0.744414 TCGTTAAGCTCCATGCAGGC 60.744 55.000 0.00 0.00 45.94 4.85
4778 4850 1.737838 TTCGTTAAGCTCCATGCAGG 58.262 50.000 0.00 0.00 45.94 4.85
4779 4851 3.127548 ACATTTCGTTAAGCTCCATGCAG 59.872 43.478 0.00 0.00 45.94 4.41
4780 4852 3.081061 ACATTTCGTTAAGCTCCATGCA 58.919 40.909 0.00 0.00 45.94 3.96
4781 4853 3.429085 CACATTTCGTTAAGCTCCATGC 58.571 45.455 0.00 0.00 43.29 4.06
4782 4854 3.731867 GCCACATTTCGTTAAGCTCCATG 60.732 47.826 0.00 0.00 0.00 3.66
4783 4855 2.423538 GCCACATTTCGTTAAGCTCCAT 59.576 45.455 0.00 0.00 0.00 3.41
4784 4856 1.810151 GCCACATTTCGTTAAGCTCCA 59.190 47.619 0.00 0.00 0.00 3.86
4785 4857 1.132453 GGCCACATTTCGTTAAGCTCC 59.868 52.381 0.00 0.00 0.00 4.70
4786 4858 2.084546 AGGCCACATTTCGTTAAGCTC 58.915 47.619 5.01 0.00 0.00 4.09
4787 4859 1.812571 CAGGCCACATTTCGTTAAGCT 59.187 47.619 5.01 0.00 0.00 3.74
4788 4860 1.539827 ACAGGCCACATTTCGTTAAGC 59.460 47.619 5.01 0.00 0.00 3.09
4789 4861 3.915437 AACAGGCCACATTTCGTTAAG 57.085 42.857 5.01 0.00 0.00 1.85
4790 4862 3.243569 CCAAACAGGCCACATTTCGTTAA 60.244 43.478 5.01 0.00 0.00 2.01
4791 4863 2.294791 CCAAACAGGCCACATTTCGTTA 59.705 45.455 5.01 0.00 0.00 3.18
4792 4864 1.068434 CCAAACAGGCCACATTTCGTT 59.932 47.619 5.01 0.00 0.00 3.85
4793 4865 0.673437 CCAAACAGGCCACATTTCGT 59.327 50.000 5.01 0.00 0.00 3.85
4794 4866 0.673437 ACCAAACAGGCCACATTTCG 59.327 50.000 5.01 0.00 43.14 3.46
4795 4867 2.482864 CAACCAAACAGGCCACATTTC 58.517 47.619 5.01 0.00 43.14 2.17
4796 4868 1.474855 GCAACCAAACAGGCCACATTT 60.475 47.619 5.01 0.00 43.14 2.32
4797 4869 0.106521 GCAACCAAACAGGCCACATT 59.893 50.000 5.01 0.00 43.14 2.71
4798 4870 1.747774 GCAACCAAACAGGCCACAT 59.252 52.632 5.01 0.00 43.14 3.21
4799 4871 2.430610 GGCAACCAAACAGGCCACA 61.431 57.895 5.01 0.00 45.70 4.17
4800 4872 2.421314 GGCAACCAAACAGGCCAC 59.579 61.111 5.01 0.00 45.70 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.