Multiple sequence alignment - TraesCS2A01G297200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G297200 chr2A 100.000 2500 0 0 1 2500 511113764 511116263 0.000000e+00 4617.0
1 TraesCS2A01G297200 chr2A 100.000 36 0 0 284 319 746983314 746983279 1.600000e-07 67.6
2 TraesCS2A01G297200 chr2D 93.803 710 29 8 889 1595 377156042 377156739 0.000000e+00 1053.0
3 TraesCS2A01G297200 chr2D 94.148 581 27 2 1927 2500 377157225 377157805 0.000000e+00 878.0
4 TraesCS2A01G297200 chr2D 92.823 209 14 1 654 861 377155679 377155887 4.040000e-78 302.0
5 TraesCS2A01G297200 chr2D 100.000 144 0 0 477 620 377155357 377155500 1.470000e-67 267.0
6 TraesCS2A01G297200 chr2D 88.158 152 17 1 1639 1790 377156920 377157070 1.980000e-41 180.0
7 TraesCS2A01G297200 chr2B 91.577 653 35 6 906 1548 448870358 448871000 0.000000e+00 883.0
8 TraesCS2A01G297200 chr2B 93.898 590 23 2 1915 2500 448872869 448873449 0.000000e+00 878.0
9 TraesCS2A01G297200 chr2B 84.795 342 30 4 538 877 448870043 448870364 8.620000e-85 324.0
10 TraesCS2A01G297200 chr2B 86.385 213 18 10 1589 1794 448871561 448871769 3.240000e-54 222.0
11 TraesCS2A01G297200 chrUn 90.556 180 16 1 1 179 86461513 86461334 1.160000e-58 237.0
12 TraesCS2A01G297200 chrUn 90.556 180 16 1 1 179 222673761 222673940 1.160000e-58 237.0
13 TraesCS2A01G297200 chrUn 90.556 180 16 1 1 179 229497089 229497268 1.160000e-58 237.0
14 TraesCS2A01G297200 chrUn 90.556 180 15 2 1 179 237101532 237101710 1.160000e-58 237.0
15 TraesCS2A01G297200 chr7D 90.556 180 16 1 1 179 381901882 381902061 1.160000e-58 237.0
16 TraesCS2A01G297200 chr6D 90.556 180 15 2 1 179 168781712 168781534 1.160000e-58 237.0
17 TraesCS2A01G297200 chr6D 87.500 112 14 0 280 391 470299223 470299334 2.020000e-26 130.0
18 TraesCS2A01G297200 chr6D 92.857 42 3 0 278 319 306707809 306707850 7.470000e-06 62.1
19 TraesCS2A01G297200 chr4D 90.556 180 15 2 1 179 123635577 123635399 1.160000e-58 237.0
20 TraesCS2A01G297200 chr1D 90.556 180 16 1 1 179 141329170 141329349 1.160000e-58 237.0
21 TraesCS2A01G297200 chr1D 97.222 36 1 0 284 319 397047703 397047668 7.470000e-06 62.1
22 TraesCS2A01G297200 chr1A 90.556 180 16 1 1 179 416425291 416425470 1.160000e-58 237.0
23 TraesCS2A01G297200 chr6A 83.851 161 22 4 280 437 2919214 2919373 1.550000e-32 150.0
24 TraesCS2A01G297200 chr7A 76.429 280 45 18 1076 1347 644845770 644846036 5.610000e-27 132.0
25 TraesCS2A01G297200 chr5D 93.617 47 3 0 273 319 380691938 380691984 1.240000e-08 71.3
26 TraesCS2A01G297200 chr5B 100.000 36 0 0 284 319 710209774 710209809 1.600000e-07 67.6
27 TraesCS2A01G297200 chr3D 92.857 42 3 0 278 319 153507071 153507112 7.470000e-06 62.1
28 TraesCS2A01G297200 chr3D 92.857 42 3 0 278 319 593111426 593111467 7.470000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G297200 chr2A 511113764 511116263 2499 False 4617.00 4617 100.00000 1 2500 1 chr2A.!!$F1 2499
1 TraesCS2A01G297200 chr2D 377155357 377157805 2448 False 536.00 1053 93.78640 477 2500 5 chr2D.!!$F1 2023
2 TraesCS2A01G297200 chr2B 448870043 448873449 3406 False 576.75 883 89.16375 538 2500 4 chr2B.!!$F1 1962

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 330 0.028902 GCAACTTTCGCGGTTCAGTT 59.971 50.0 6.13 6.79 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 3769 0.315869 GTGTTGACACGTCGCCAAAG 60.316 55.0 0.0 0.0 37.1 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.855689 CTCGCACATGAAATTCCCTTT 57.144 42.857 0.00 0.00 0.00 3.11
21 22 3.504863 CTCGCACATGAAATTCCCTTTG 58.495 45.455 0.00 0.00 0.00 2.77
22 23 3.153130 TCGCACATGAAATTCCCTTTGA 58.847 40.909 0.00 0.00 0.00 2.69
23 24 3.571828 TCGCACATGAAATTCCCTTTGAA 59.428 39.130 0.00 0.00 37.38 2.69
24 25 3.922240 CGCACATGAAATTCCCTTTGAAG 59.078 43.478 0.00 0.00 36.14 3.02
25 26 4.248058 GCACATGAAATTCCCTTTGAAGG 58.752 43.478 0.00 2.69 46.06 3.46
58 59 7.979444 TTTGACTATTATGCTATACTTGGGC 57.021 36.000 0.00 0.00 0.00 5.36
59 60 6.680148 TGACTATTATGCTATACTTGGGCA 57.320 37.500 0.00 0.00 40.32 5.36
60 61 7.073457 TGACTATTATGCTATACTTGGGCAA 57.927 36.000 0.00 0.00 39.46 4.52
61 62 7.513856 TGACTATTATGCTATACTTGGGCAAA 58.486 34.615 0.00 0.00 39.46 3.68
62 63 7.661437 TGACTATTATGCTATACTTGGGCAAAG 59.339 37.037 0.00 0.00 42.07 2.77
63 64 5.712152 ATTATGCTATACTTGGGCAAAGC 57.288 39.130 0.27 0.00 39.76 3.51
78 79 4.139183 GCAAAGCCATCGAGACAATATC 57.861 45.455 0.00 0.00 0.00 1.63
79 80 3.058639 GCAAAGCCATCGAGACAATATCC 60.059 47.826 0.00 0.00 0.00 2.59
80 81 4.129380 CAAAGCCATCGAGACAATATCCA 58.871 43.478 0.00 0.00 0.00 3.41
81 82 4.630644 AAGCCATCGAGACAATATCCAT 57.369 40.909 0.00 0.00 0.00 3.41
82 83 4.199432 AGCCATCGAGACAATATCCATC 57.801 45.455 0.00 0.00 0.00 3.51
83 84 3.580022 AGCCATCGAGACAATATCCATCA 59.420 43.478 0.00 0.00 0.00 3.07
84 85 3.681897 GCCATCGAGACAATATCCATCAC 59.318 47.826 0.00 0.00 0.00 3.06
85 86 4.248859 CCATCGAGACAATATCCATCACC 58.751 47.826 0.00 0.00 0.00 4.02
86 87 4.262592 CCATCGAGACAATATCCATCACCA 60.263 45.833 0.00 0.00 0.00 4.17
87 88 4.590850 TCGAGACAATATCCATCACCAG 57.409 45.455 0.00 0.00 0.00 4.00
88 89 3.321968 TCGAGACAATATCCATCACCAGG 59.678 47.826 0.00 0.00 0.00 4.45
89 90 3.321968 CGAGACAATATCCATCACCAGGA 59.678 47.826 0.00 0.00 39.97 3.86
90 91 4.202253 CGAGACAATATCCATCACCAGGAA 60.202 45.833 0.00 0.00 38.93 3.36
91 92 5.301835 AGACAATATCCATCACCAGGAAG 57.698 43.478 0.00 0.00 38.93 3.46
92 93 4.971282 AGACAATATCCATCACCAGGAAGA 59.029 41.667 0.00 0.00 38.93 2.87
93 94 5.429762 AGACAATATCCATCACCAGGAAGAA 59.570 40.000 0.00 0.00 38.93 2.52
94 95 5.688807 ACAATATCCATCACCAGGAAGAAG 58.311 41.667 0.00 0.00 38.93 2.85
95 96 5.429762 ACAATATCCATCACCAGGAAGAAGA 59.570 40.000 0.00 0.00 38.93 2.87
96 97 5.822132 ATATCCATCACCAGGAAGAAGAG 57.178 43.478 0.00 0.00 38.93 2.85
97 98 3.190383 TCCATCACCAGGAAGAAGAGA 57.810 47.619 0.00 0.00 30.71 3.10
98 99 3.520696 TCCATCACCAGGAAGAAGAGAA 58.479 45.455 0.00 0.00 30.71 2.87
99 100 3.517100 TCCATCACCAGGAAGAAGAGAAG 59.483 47.826 0.00 0.00 30.71 2.85
100 101 3.269178 CATCACCAGGAAGAAGAGAAGC 58.731 50.000 0.00 0.00 0.00 3.86
101 102 1.273606 TCACCAGGAAGAAGAGAAGCG 59.726 52.381 0.00 0.00 0.00 4.68
102 103 1.273606 CACCAGGAAGAAGAGAAGCGA 59.726 52.381 0.00 0.00 0.00 4.93
103 104 1.971357 ACCAGGAAGAAGAGAAGCGAA 59.029 47.619 0.00 0.00 0.00 4.70
104 105 2.028567 ACCAGGAAGAAGAGAAGCGAAG 60.029 50.000 0.00 0.00 0.00 3.79
149 150 8.478775 AACCTGAGATATACAGTATTGTAGCA 57.521 34.615 4.32 0.00 42.72 3.49
150 151 8.478775 ACCTGAGATATACAGTATTGTAGCAA 57.521 34.615 4.32 0.00 42.72 3.91
151 152 9.094578 ACCTGAGATATACAGTATTGTAGCAAT 57.905 33.333 4.32 0.00 42.72 3.56
152 153 9.363763 CCTGAGATATACAGTATTGTAGCAATG 57.636 37.037 4.32 0.00 42.72 2.82
153 154 9.363763 CTGAGATATACAGTATTGTAGCAATGG 57.636 37.037 4.32 0.00 42.72 3.16
154 155 8.870116 TGAGATATACAGTATTGTAGCAATGGT 58.130 33.333 4.32 0.00 42.72 3.55
155 156 9.360093 GAGATATACAGTATTGTAGCAATGGTC 57.640 37.037 4.32 0.00 42.72 4.02
156 157 8.029522 AGATATACAGTATTGTAGCAATGGTCG 58.970 37.037 4.32 0.00 42.72 4.79
157 158 4.465632 ACAGTATTGTAGCAATGGTCGA 57.534 40.909 4.78 0.00 35.25 4.20
158 159 4.827692 ACAGTATTGTAGCAATGGTCGAA 58.172 39.130 4.78 0.00 35.25 3.71
159 160 5.428253 ACAGTATTGTAGCAATGGTCGAAT 58.572 37.500 4.78 0.00 35.25 3.34
160 161 5.880332 ACAGTATTGTAGCAATGGTCGAATT 59.120 36.000 4.78 0.00 35.25 2.17
161 162 6.183360 ACAGTATTGTAGCAATGGTCGAATTG 60.183 38.462 5.61 5.61 36.90 2.32
162 163 5.880332 AGTATTGTAGCAATGGTCGAATTGT 59.120 36.000 10.65 2.40 39.33 2.71
163 164 5.643379 ATTGTAGCAATGGTCGAATTGTT 57.357 34.783 10.65 7.77 39.33 2.83
164 165 4.418013 TGTAGCAATGGTCGAATTGTTG 57.582 40.909 10.65 4.70 39.33 3.33
165 166 2.352503 AGCAATGGTCGAATTGTTGC 57.647 45.000 14.52 14.52 43.97 4.17
166 167 1.612950 AGCAATGGTCGAATTGTTGCA 59.387 42.857 20.73 0.00 45.54 4.08
167 168 2.231964 AGCAATGGTCGAATTGTTGCAT 59.768 40.909 20.73 9.09 45.54 3.96
168 169 3.443329 AGCAATGGTCGAATTGTTGCATA 59.557 39.130 20.73 0.00 45.54 3.14
169 170 3.792956 GCAATGGTCGAATTGTTGCATAG 59.207 43.478 16.40 0.00 43.33 2.23
170 171 3.698029 ATGGTCGAATTGTTGCATAGC 57.302 42.857 0.00 0.00 0.00 2.97
171 172 1.742831 TGGTCGAATTGTTGCATAGCC 59.257 47.619 0.00 0.00 0.00 3.93
172 173 1.065551 GGTCGAATTGTTGCATAGCCC 59.934 52.381 0.00 0.00 0.00 5.19
173 174 1.065551 GTCGAATTGTTGCATAGCCCC 59.934 52.381 0.00 0.00 0.00 5.80
174 175 0.385390 CGAATTGTTGCATAGCCCCC 59.615 55.000 0.00 0.00 0.00 5.40
175 176 1.780503 GAATTGTTGCATAGCCCCCT 58.219 50.000 0.00 0.00 0.00 4.79
176 177 1.683385 GAATTGTTGCATAGCCCCCTC 59.317 52.381 0.00 0.00 0.00 4.30
177 178 0.929244 ATTGTTGCATAGCCCCCTCT 59.071 50.000 0.00 0.00 0.00 3.69
178 179 1.590591 TTGTTGCATAGCCCCCTCTA 58.409 50.000 0.00 0.00 0.00 2.43
179 180 1.819753 TGTTGCATAGCCCCCTCTAT 58.180 50.000 0.00 0.00 0.00 1.98
180 181 2.135189 TGTTGCATAGCCCCCTCTATT 58.865 47.619 0.00 0.00 0.00 1.73
181 182 2.513738 TGTTGCATAGCCCCCTCTATTT 59.486 45.455 0.00 0.00 0.00 1.40
182 183 3.149981 GTTGCATAGCCCCCTCTATTTC 58.850 50.000 0.00 0.00 0.00 2.17
183 184 2.706350 TGCATAGCCCCCTCTATTTCT 58.294 47.619 0.00 0.00 0.00 2.52
184 185 3.056080 TGCATAGCCCCCTCTATTTCTT 58.944 45.455 0.00 0.00 0.00 2.52
185 186 3.181440 TGCATAGCCCCCTCTATTTCTTG 60.181 47.826 0.00 0.00 0.00 3.02
186 187 3.181439 GCATAGCCCCCTCTATTTCTTGT 60.181 47.826 0.00 0.00 0.00 3.16
187 188 4.392940 CATAGCCCCCTCTATTTCTTGTG 58.607 47.826 0.00 0.00 0.00 3.33
188 189 1.566231 AGCCCCCTCTATTTCTTGTGG 59.434 52.381 0.00 0.00 0.00 4.17
189 190 1.410224 GCCCCCTCTATTTCTTGTGGG 60.410 57.143 0.00 0.00 36.90 4.61
190 191 1.410224 CCCCCTCTATTTCTTGTGGGC 60.410 57.143 0.00 0.00 36.10 5.36
191 192 1.566231 CCCCTCTATTTCTTGTGGGCT 59.434 52.381 0.00 0.00 36.10 5.19
192 193 2.024941 CCCCTCTATTTCTTGTGGGCTT 60.025 50.000 0.00 0.00 36.10 4.35
193 194 3.564352 CCCCTCTATTTCTTGTGGGCTTT 60.564 47.826 0.00 0.00 36.10 3.51
194 195 3.445096 CCCTCTATTTCTTGTGGGCTTTG 59.555 47.826 0.00 0.00 31.42 2.77
195 196 3.445096 CCTCTATTTCTTGTGGGCTTTGG 59.555 47.826 0.00 0.00 0.00 3.28
196 197 3.430453 TCTATTTCTTGTGGGCTTTGGG 58.570 45.455 0.00 0.00 0.00 4.12
197 198 2.101640 ATTTCTTGTGGGCTTTGGGT 57.898 45.000 0.00 0.00 0.00 4.51
198 199 1.408969 TTTCTTGTGGGCTTTGGGTC 58.591 50.000 0.00 0.00 0.00 4.46
199 200 0.555769 TTCTTGTGGGCTTTGGGTCT 59.444 50.000 0.00 0.00 0.00 3.85
200 201 0.178992 TCTTGTGGGCTTTGGGTCTG 60.179 55.000 0.00 0.00 0.00 3.51
201 202 1.152567 TTGTGGGCTTTGGGTCTGG 60.153 57.895 0.00 0.00 0.00 3.86
202 203 2.991540 GTGGGCTTTGGGTCTGGC 60.992 66.667 0.00 0.00 0.00 4.85
203 204 3.185203 TGGGCTTTGGGTCTGGCT 61.185 61.111 0.00 0.00 0.00 4.75
204 205 2.677875 GGGCTTTGGGTCTGGCTG 60.678 66.667 0.00 0.00 0.00 4.85
205 206 2.436109 GGCTTTGGGTCTGGCTGA 59.564 61.111 0.00 0.00 0.00 4.26
206 207 1.676967 GGCTTTGGGTCTGGCTGAG 60.677 63.158 0.00 0.00 0.00 3.35
207 208 1.376466 GCTTTGGGTCTGGCTGAGA 59.624 57.895 0.00 0.00 0.00 3.27
213 214 2.659610 GTCTGGCTGAGACGGCTT 59.340 61.111 0.00 0.00 41.91 4.35
214 215 1.739562 GTCTGGCTGAGACGGCTTG 60.740 63.158 0.00 0.00 41.91 4.01
215 216 3.123620 CTGGCTGAGACGGCTTGC 61.124 66.667 8.48 8.48 35.82 4.01
218 219 3.044305 GCTGAGACGGCTTGCGTT 61.044 61.111 0.00 0.00 32.24 4.84
219 220 1.736645 GCTGAGACGGCTTGCGTTA 60.737 57.895 0.00 0.00 32.24 3.18
220 221 1.289109 GCTGAGACGGCTTGCGTTAA 61.289 55.000 0.00 0.00 32.24 2.01
221 222 1.359848 CTGAGACGGCTTGCGTTAAT 58.640 50.000 0.00 0.00 0.00 1.40
222 223 1.732259 CTGAGACGGCTTGCGTTAATT 59.268 47.619 0.00 0.00 0.00 1.40
223 224 2.927477 CTGAGACGGCTTGCGTTAATTA 59.073 45.455 0.00 0.00 0.00 1.40
224 225 3.327626 TGAGACGGCTTGCGTTAATTAA 58.672 40.909 0.00 0.00 0.00 1.40
225 226 3.936453 TGAGACGGCTTGCGTTAATTAAT 59.064 39.130 0.00 0.00 0.00 1.40
226 227 5.110598 TGAGACGGCTTGCGTTAATTAATA 58.889 37.500 0.00 0.00 0.00 0.98
227 228 5.581479 TGAGACGGCTTGCGTTAATTAATAA 59.419 36.000 0.00 0.00 0.00 1.40
228 229 6.259167 TGAGACGGCTTGCGTTAATTAATAAT 59.741 34.615 0.00 0.00 0.00 1.28
229 230 7.023197 AGACGGCTTGCGTTAATTAATAATT 57.977 32.000 0.31 3.56 34.90 1.40
230 231 8.145316 AGACGGCTTGCGTTAATTAATAATTA 57.855 30.769 0.31 1.58 32.38 1.40
231 232 8.614346 AGACGGCTTGCGTTAATTAATAATTAA 58.386 29.630 12.65 12.65 40.13 1.40
232 233 9.389570 GACGGCTTGCGTTAATTAATAATTAAT 57.610 29.630 17.87 0.19 43.13 1.40
233 234 9.176181 ACGGCTTGCGTTAATTAATAATTAATG 57.824 29.630 23.41 23.41 46.11 1.90
234 235 8.635124 CGGCTTGCGTTAATTAATAATTAATGG 58.365 33.333 26.31 19.02 44.67 3.16
235 236 9.471084 GGCTTGCGTTAATTAATAATTAATGGT 57.529 29.630 26.31 0.41 44.67 3.55
252 253 8.908172 ATTAATGGTTTTGTTTGTGCTTTTTG 57.092 26.923 0.00 0.00 0.00 2.44
253 254 5.956068 ATGGTTTTGTTTGTGCTTTTTGT 57.044 30.435 0.00 0.00 0.00 2.83
254 255 5.100751 TGGTTTTGTTTGTGCTTTTTGTG 57.899 34.783 0.00 0.00 0.00 3.33
255 256 4.023707 TGGTTTTGTTTGTGCTTTTTGTGG 60.024 37.500 0.00 0.00 0.00 4.17
256 257 4.214332 GGTTTTGTTTGTGCTTTTTGTGGA 59.786 37.500 0.00 0.00 0.00 4.02
257 258 5.278022 GGTTTTGTTTGTGCTTTTTGTGGAA 60.278 36.000 0.00 0.00 0.00 3.53
258 259 6.377780 GTTTTGTTTGTGCTTTTTGTGGAAT 58.622 32.000 0.00 0.00 0.00 3.01
259 260 6.566197 TTTGTTTGTGCTTTTTGTGGAATT 57.434 29.167 0.00 0.00 0.00 2.17
260 261 6.566197 TTGTTTGTGCTTTTTGTGGAATTT 57.434 29.167 0.00 0.00 0.00 1.82
261 262 6.566197 TGTTTGTGCTTTTTGTGGAATTTT 57.434 29.167 0.00 0.00 0.00 1.82
262 263 6.974965 TGTTTGTGCTTTTTGTGGAATTTTT 58.025 28.000 0.00 0.00 0.00 1.94
281 282 2.027003 TTTGGGACCCTAATAACGCG 57.973 50.000 13.00 3.53 0.00 6.01
282 283 0.903942 TTGGGACCCTAATAACGCGT 59.096 50.000 13.00 5.58 0.00 6.01
283 284 0.176219 TGGGACCCTAATAACGCGTG 59.824 55.000 14.98 0.00 0.00 5.34
284 285 0.531311 GGGACCCTAATAACGCGTGG 60.531 60.000 14.98 11.54 0.00 4.94
285 286 0.461135 GGACCCTAATAACGCGTGGA 59.539 55.000 14.98 4.06 0.00 4.02
286 287 1.069668 GGACCCTAATAACGCGTGGAT 59.930 52.381 14.98 6.83 0.00 3.41
287 288 2.132762 GACCCTAATAACGCGTGGATG 58.867 52.381 14.98 2.24 0.00 3.51
288 289 1.758280 ACCCTAATAACGCGTGGATGA 59.242 47.619 14.98 1.31 0.00 2.92
289 290 2.132762 CCCTAATAACGCGTGGATGAC 58.867 52.381 14.98 0.00 0.00 3.06
290 291 2.482316 CCCTAATAACGCGTGGATGACA 60.482 50.000 14.98 0.00 0.00 3.58
291 292 3.191669 CCTAATAACGCGTGGATGACAA 58.808 45.455 14.98 0.00 0.00 3.18
292 293 3.000925 CCTAATAACGCGTGGATGACAAC 59.999 47.826 14.98 0.00 0.00 3.32
293 294 2.380084 ATAACGCGTGGATGACAACT 57.620 45.000 14.98 0.00 0.00 3.16
294 295 2.157834 TAACGCGTGGATGACAACTT 57.842 45.000 14.98 0.00 0.00 2.66
295 296 1.305201 AACGCGTGGATGACAACTTT 58.695 45.000 14.98 0.00 0.00 2.66
296 297 2.157834 ACGCGTGGATGACAACTTTA 57.842 45.000 12.93 0.00 0.00 1.85
297 298 2.066262 ACGCGTGGATGACAACTTTAG 58.934 47.619 12.93 0.00 0.00 1.85
298 299 2.066262 CGCGTGGATGACAACTTTAGT 58.934 47.619 0.00 0.00 0.00 2.24
299 300 2.478894 CGCGTGGATGACAACTTTAGTT 59.521 45.455 0.00 0.00 39.12 2.24
311 312 3.923017 ACTTTAGTTGTGAAGCATGGC 57.077 42.857 0.00 0.00 0.00 4.40
312 313 3.221771 ACTTTAGTTGTGAAGCATGGCA 58.778 40.909 0.00 0.00 0.00 4.92
313 314 3.636300 ACTTTAGTTGTGAAGCATGGCAA 59.364 39.130 0.00 0.00 0.00 4.52
314 315 3.641437 TTAGTTGTGAAGCATGGCAAC 57.359 42.857 0.00 0.00 40.83 4.17
315 316 1.696063 AGTTGTGAAGCATGGCAACT 58.304 45.000 9.78 9.78 44.36 3.16
316 317 2.034124 AGTTGTGAAGCATGGCAACTT 58.966 42.857 5.89 5.89 46.18 2.66
317 318 2.431782 AGTTGTGAAGCATGGCAACTTT 59.568 40.909 7.47 0.00 46.18 2.66
318 319 2.796593 GTTGTGAAGCATGGCAACTTTC 59.203 45.455 7.47 4.81 38.41 2.62
319 320 1.001487 TGTGAAGCATGGCAACTTTCG 60.001 47.619 7.47 0.00 37.61 3.46
320 321 0.039256 TGAAGCATGGCAACTTTCGC 60.039 50.000 7.47 0.00 37.61 4.70
321 322 1.067199 GAAGCATGGCAACTTTCGCG 61.067 55.000 0.00 0.00 37.61 5.87
322 323 2.476534 AAGCATGGCAACTTTCGCGG 62.477 55.000 6.13 0.00 37.61 6.46
323 324 2.953821 CATGGCAACTTTCGCGGT 59.046 55.556 6.13 0.00 37.61 5.68
324 325 1.285641 CATGGCAACTTTCGCGGTT 59.714 52.632 6.13 0.00 37.61 4.44
325 326 0.729140 CATGGCAACTTTCGCGGTTC 60.729 55.000 6.13 0.00 37.61 3.62
326 327 1.169661 ATGGCAACTTTCGCGGTTCA 61.170 50.000 6.13 0.00 37.61 3.18
327 328 1.082104 GGCAACTTTCGCGGTTCAG 60.082 57.895 6.13 0.00 0.00 3.02
328 329 1.647084 GCAACTTTCGCGGTTCAGT 59.353 52.632 6.13 0.00 0.00 3.41
329 330 0.028902 GCAACTTTCGCGGTTCAGTT 59.971 50.000 6.13 6.79 0.00 3.16
330 331 1.533129 GCAACTTTCGCGGTTCAGTTT 60.533 47.619 6.13 0.00 0.00 2.66
331 332 2.286536 GCAACTTTCGCGGTTCAGTTTA 60.287 45.455 6.13 0.00 0.00 2.01
332 333 3.608474 GCAACTTTCGCGGTTCAGTTTAT 60.608 43.478 6.13 0.00 0.00 1.40
333 334 4.533222 CAACTTTCGCGGTTCAGTTTATT 58.467 39.130 6.13 0.00 0.00 1.40
334 335 4.823790 ACTTTCGCGGTTCAGTTTATTT 57.176 36.364 6.13 0.00 0.00 1.40
335 336 5.177725 ACTTTCGCGGTTCAGTTTATTTT 57.822 34.783 6.13 0.00 0.00 1.82
336 337 5.584442 ACTTTCGCGGTTCAGTTTATTTTT 58.416 33.333 6.13 0.00 0.00 1.94
337 338 5.457473 ACTTTCGCGGTTCAGTTTATTTTTG 59.543 36.000 6.13 0.00 0.00 2.44
338 339 4.815040 TCGCGGTTCAGTTTATTTTTGA 57.185 36.364 6.13 0.00 0.00 2.69
339 340 5.365403 TCGCGGTTCAGTTTATTTTTGAT 57.635 34.783 6.13 0.00 0.00 2.57
340 341 6.483385 TCGCGGTTCAGTTTATTTTTGATA 57.517 33.333 6.13 0.00 0.00 2.15
341 342 6.539324 TCGCGGTTCAGTTTATTTTTGATAG 58.461 36.000 6.13 0.00 0.00 2.08
342 343 6.369340 TCGCGGTTCAGTTTATTTTTGATAGA 59.631 34.615 6.13 0.00 0.00 1.98
343 344 7.018826 CGCGGTTCAGTTTATTTTTGATAGAA 58.981 34.615 0.00 0.00 0.00 2.10
344 345 7.535940 CGCGGTTCAGTTTATTTTTGATAGAAA 59.464 33.333 0.00 0.00 0.00 2.52
345 346 8.635983 GCGGTTCAGTTTATTTTTGATAGAAAC 58.364 33.333 0.00 0.00 0.00 2.78
346 347 9.893305 CGGTTCAGTTTATTTTTGATAGAAACT 57.107 29.630 0.00 0.00 40.14 2.66
357 358 8.682128 TTTTTGATAGAAACTTGTTGTGTGTC 57.318 30.769 0.00 0.00 0.00 3.67
358 359 6.993786 TTGATAGAAACTTGTTGTGTGTCA 57.006 33.333 0.00 0.00 0.00 3.58
359 360 6.358118 TGATAGAAACTTGTTGTGTGTCAC 57.642 37.500 0.00 0.00 34.56 3.67
360 361 6.112734 TGATAGAAACTTGTTGTGTGTCACT 58.887 36.000 4.27 0.00 35.11 3.41
361 362 4.685169 AGAAACTTGTTGTGTGTCACTG 57.315 40.909 4.27 0.00 35.11 3.66
362 363 4.323417 AGAAACTTGTTGTGTGTCACTGA 58.677 39.130 4.27 0.00 35.11 3.41
363 364 4.759693 AGAAACTTGTTGTGTGTCACTGAA 59.240 37.500 4.27 0.00 35.11 3.02
364 365 5.240623 AGAAACTTGTTGTGTGTCACTGAAA 59.759 36.000 4.27 0.00 35.11 2.69
365 366 5.643379 AACTTGTTGTGTGTCACTGAAAT 57.357 34.783 4.27 0.00 35.11 2.17
366 367 5.643379 ACTTGTTGTGTGTCACTGAAATT 57.357 34.783 4.27 0.00 35.11 1.82
367 368 6.024552 ACTTGTTGTGTGTCACTGAAATTT 57.975 33.333 4.27 0.00 35.11 1.82
368 369 5.863397 ACTTGTTGTGTGTCACTGAAATTTG 59.137 36.000 4.27 0.00 35.11 2.32
369 370 4.172505 TGTTGTGTGTCACTGAAATTTGC 58.827 39.130 4.27 0.00 35.11 3.68
370 371 3.435105 TGTGTGTCACTGAAATTTGCC 57.565 42.857 4.27 0.00 35.11 4.52
371 372 2.757314 TGTGTGTCACTGAAATTTGCCA 59.243 40.909 4.27 0.00 35.11 4.92
372 373 3.384146 TGTGTGTCACTGAAATTTGCCAT 59.616 39.130 4.27 0.00 35.11 4.40
373 374 3.983344 GTGTGTCACTGAAATTTGCCATC 59.017 43.478 4.27 0.00 0.00 3.51
374 375 3.005684 TGTGTCACTGAAATTTGCCATCC 59.994 43.478 4.27 0.00 0.00 3.51
375 376 3.256631 GTGTCACTGAAATTTGCCATCCT 59.743 43.478 0.00 0.00 0.00 3.24
376 377 3.896888 TGTCACTGAAATTTGCCATCCTT 59.103 39.130 0.00 0.00 0.00 3.36
377 378 4.240096 GTCACTGAAATTTGCCATCCTTG 58.760 43.478 0.00 0.00 0.00 3.61
378 379 2.997986 CACTGAAATTTGCCATCCTTGC 59.002 45.455 0.00 0.00 0.00 4.01
379 380 2.633967 ACTGAAATTTGCCATCCTTGCA 59.366 40.909 0.00 0.00 36.84 4.08
380 381 3.262405 ACTGAAATTTGCCATCCTTGCAT 59.738 39.130 0.00 0.00 38.76 3.96
381 382 3.601435 TGAAATTTGCCATCCTTGCATG 58.399 40.909 0.00 0.00 38.76 4.06
382 383 3.261137 TGAAATTTGCCATCCTTGCATGA 59.739 39.130 0.00 0.00 38.76 3.07
383 384 4.080807 TGAAATTTGCCATCCTTGCATGAT 60.081 37.500 0.00 0.00 38.76 2.45
384 385 4.497291 AATTTGCCATCCTTGCATGATT 57.503 36.364 0.00 0.00 38.76 2.57
385 386 2.971660 TTGCCATCCTTGCATGATTG 57.028 45.000 0.00 0.00 38.76 2.67
386 387 2.146920 TGCCATCCTTGCATGATTGA 57.853 45.000 0.00 0.00 32.85 2.57
387 388 2.458620 TGCCATCCTTGCATGATTGAA 58.541 42.857 0.00 0.00 32.85 2.69
388 389 2.832733 TGCCATCCTTGCATGATTGAAA 59.167 40.909 0.00 0.00 32.85 2.69
389 390 3.452990 TGCCATCCTTGCATGATTGAAAT 59.547 39.130 0.00 0.00 32.85 2.17
390 391 4.080807 TGCCATCCTTGCATGATTGAAATT 60.081 37.500 0.00 0.00 32.85 1.82
391 392 5.128991 TGCCATCCTTGCATGATTGAAATTA 59.871 36.000 0.00 0.00 32.85 1.40
392 393 6.183361 TGCCATCCTTGCATGATTGAAATTAT 60.183 34.615 0.00 0.00 32.85 1.28
393 394 6.708949 GCCATCCTTGCATGATTGAAATTATT 59.291 34.615 0.00 0.00 0.00 1.40
394 395 7.874016 GCCATCCTTGCATGATTGAAATTATTA 59.126 33.333 0.00 0.00 0.00 0.98
395 396 9.938280 CCATCCTTGCATGATTGAAATTATTAT 57.062 29.630 0.00 0.00 0.00 1.28
409 410 9.651913 TTGAAATTATTATGAAAACTTCAGGGC 57.348 29.630 0.00 0.00 43.98 5.19
410 411 8.257306 TGAAATTATTATGAAAACTTCAGGGCC 58.743 33.333 0.00 0.00 43.98 5.80
411 412 5.828299 TTATTATGAAAACTTCAGGGCCG 57.172 39.130 0.00 0.00 43.98 6.13
412 413 3.426787 TTATGAAAACTTCAGGGCCGA 57.573 42.857 0.00 0.00 43.98 5.54
413 414 2.286365 ATGAAAACTTCAGGGCCGAA 57.714 45.000 0.00 4.18 43.98 4.30
414 415 1.604604 TGAAAACTTCAGGGCCGAAG 58.395 50.000 25.95 25.95 46.47 3.79
418 419 4.285851 CTTCAGGGCCGAAGTGTC 57.714 61.111 22.02 0.00 38.07 3.67
419 420 1.371183 CTTCAGGGCCGAAGTGTCA 59.629 57.895 22.02 0.00 38.07 3.58
420 421 0.036010 CTTCAGGGCCGAAGTGTCAT 60.036 55.000 22.02 0.00 38.07 3.06
421 422 0.321564 TTCAGGGCCGAAGTGTCATG 60.322 55.000 0.00 0.00 0.00 3.07
422 423 2.045926 AGGGCCGAAGTGTCATGC 60.046 61.111 0.00 0.00 0.00 4.06
423 424 2.359850 GGGCCGAAGTGTCATGCA 60.360 61.111 0.00 0.00 0.00 3.96
431 432 4.361253 GTGTCATGCACCTGACGT 57.639 55.556 14.14 0.00 46.89 4.34
432 433 1.862123 GTGTCATGCACCTGACGTG 59.138 57.895 14.14 0.00 46.89 4.49
433 434 0.880278 GTGTCATGCACCTGACGTGT 60.880 55.000 14.14 0.00 46.89 4.49
434 435 0.879839 TGTCATGCACCTGACGTGTG 60.880 55.000 14.14 0.00 46.89 3.82
435 436 1.301637 TCATGCACCTGACGTGTGG 60.302 57.895 0.00 0.00 44.97 4.17
436 437 2.669569 ATGCACCTGACGTGTGGC 60.670 61.111 0.00 0.00 44.97 5.01
437 438 3.474486 ATGCACCTGACGTGTGGCA 62.474 57.895 0.00 0.00 44.97 4.92
438 439 2.899838 GCACCTGACGTGTGGCAA 60.900 61.111 0.00 0.00 44.97 4.52
439 440 2.260869 GCACCTGACGTGTGGCAAT 61.261 57.895 0.00 0.00 44.97 3.56
440 441 1.795170 GCACCTGACGTGTGGCAATT 61.795 55.000 0.00 0.00 44.97 2.32
441 442 1.518325 CACCTGACGTGTGGCAATTA 58.482 50.000 0.00 0.00 37.73 1.40
442 443 2.083774 CACCTGACGTGTGGCAATTAT 58.916 47.619 0.00 0.00 37.73 1.28
443 444 2.095853 CACCTGACGTGTGGCAATTATC 59.904 50.000 0.00 0.00 37.73 1.75
444 445 2.290008 ACCTGACGTGTGGCAATTATCA 60.290 45.455 0.00 0.00 0.00 2.15
445 446 2.746904 CCTGACGTGTGGCAATTATCAA 59.253 45.455 0.00 0.00 0.00 2.57
446 447 3.378112 CCTGACGTGTGGCAATTATCAAT 59.622 43.478 0.00 0.00 0.00 2.57
447 448 4.496341 CCTGACGTGTGGCAATTATCAATC 60.496 45.833 0.00 0.00 0.00 2.67
448 449 4.006319 TGACGTGTGGCAATTATCAATCA 58.994 39.130 0.00 0.00 0.00 2.57
449 450 4.639755 TGACGTGTGGCAATTATCAATCAT 59.360 37.500 0.00 0.00 0.00 2.45
450 451 5.125257 TGACGTGTGGCAATTATCAATCATT 59.875 36.000 0.00 0.00 0.00 2.57
451 452 5.964758 ACGTGTGGCAATTATCAATCATTT 58.035 33.333 0.00 0.00 0.00 2.32
452 453 7.094508 ACGTGTGGCAATTATCAATCATTTA 57.905 32.000 0.00 0.00 0.00 1.40
453 454 7.715657 ACGTGTGGCAATTATCAATCATTTAT 58.284 30.769 0.00 0.00 0.00 1.40
454 455 8.196771 ACGTGTGGCAATTATCAATCATTTATT 58.803 29.630 0.00 0.00 0.00 1.40
455 456 8.693504 CGTGTGGCAATTATCAATCATTTATTC 58.306 33.333 0.00 0.00 0.00 1.75
456 457 9.754382 GTGTGGCAATTATCAATCATTTATTCT 57.246 29.630 0.00 0.00 0.00 2.40
468 469 9.834628 TCAATCATTTATTCTTTTTGTACCGTC 57.165 29.630 0.00 0.00 0.00 4.79
469 470 9.840427 CAATCATTTATTCTTTTTGTACCGTCT 57.160 29.630 0.00 0.00 0.00 4.18
470 471 9.840427 AATCATTTATTCTTTTTGTACCGTCTG 57.160 29.630 0.00 0.00 0.00 3.51
471 472 8.385898 TCATTTATTCTTTTTGTACCGTCTGT 57.614 30.769 0.00 0.00 0.00 3.41
472 473 8.842280 TCATTTATTCTTTTTGTACCGTCTGTT 58.158 29.630 0.00 0.00 0.00 3.16
473 474 8.901748 CATTTATTCTTTTTGTACCGTCTGTTG 58.098 33.333 0.00 0.00 0.00 3.33
474 475 7.556733 TTATTCTTTTTGTACCGTCTGTTGT 57.443 32.000 0.00 0.00 0.00 3.32
475 476 8.659925 TTATTCTTTTTGTACCGTCTGTTGTA 57.340 30.769 0.00 0.00 0.00 2.41
627 628 0.240678 TGCCATCACAAATGTCGTGC 59.759 50.000 0.00 0.00 34.27 5.34
630 631 2.521996 CCATCACAAATGTCGTGCATG 58.478 47.619 0.00 0.00 37.96 4.06
632 633 3.126686 CCATCACAAATGTCGTGCATGTA 59.873 43.478 5.68 0.00 37.96 2.29
634 635 2.156697 TCACAAATGTCGTGCATGTACG 59.843 45.455 27.63 27.63 44.98 3.67
643 644 3.049912 TCGTGCATGTACGATAGATTGC 58.950 45.455 31.12 0.00 46.94 3.56
696 843 4.826733 AGGAAGTTGTGCACACATTTATCA 59.173 37.500 21.56 0.00 41.52 2.15
742 889 2.028385 ACACACGTATCTTGTTCCCTCC 60.028 50.000 0.00 0.00 0.00 4.30
743 890 1.203994 ACACGTATCTTGTTCCCTCCG 59.796 52.381 0.00 0.00 0.00 4.63
755 902 2.584064 CCTCCGGTGTGCTATGCA 59.416 61.111 0.00 0.00 35.60 3.96
775 922 3.307242 GCATGTGCTTCTTAACGTAGAGG 59.693 47.826 0.00 0.00 38.21 3.69
777 924 4.170292 TGTGCTTCTTAACGTAGAGGAC 57.830 45.455 1.90 2.39 0.00 3.85
781 928 5.288952 GTGCTTCTTAACGTAGAGGACAATC 59.711 44.000 1.90 0.00 0.00 2.67
801 948 1.482182 CCTGACGGATGGTGAATCTGA 59.518 52.381 1.26 0.00 43.50 3.27
866 1013 0.392998 GTCGGCAATCCATGGACACT 60.393 55.000 18.99 1.16 0.00 3.55
867 1014 0.392863 TCGGCAATCCATGGACACTG 60.393 55.000 18.99 15.63 0.00 3.66
868 1015 0.677731 CGGCAATCCATGGACACTGT 60.678 55.000 18.99 0.00 0.00 3.55
869 1016 1.406751 CGGCAATCCATGGACACTGTA 60.407 52.381 18.99 0.00 0.00 2.74
870 1017 2.017049 GGCAATCCATGGACACTGTAC 58.983 52.381 18.99 8.63 0.00 2.90
871 1018 2.617788 GGCAATCCATGGACACTGTACA 60.618 50.000 18.99 0.00 0.00 2.90
873 1020 4.450976 GCAATCCATGGACACTGTACATA 58.549 43.478 18.99 0.00 34.46 2.29
874 1021 4.512944 GCAATCCATGGACACTGTACATAG 59.487 45.833 18.99 0.00 34.46 2.23
875 1022 3.819564 TCCATGGACACTGTACATAGC 57.180 47.619 11.44 0.00 34.46 2.97
876 1023 3.103742 TCCATGGACACTGTACATAGCA 58.896 45.455 11.44 0.00 34.46 3.49
878 1025 4.019771 TCCATGGACACTGTACATAGCAAA 60.020 41.667 11.44 0.00 34.46 3.68
880 1027 5.182950 CCATGGACACTGTACATAGCAAAAA 59.817 40.000 5.56 0.00 34.46 1.94
903 1176 3.799281 AAAAACCATGGACACTGTGTG 57.201 42.857 21.47 5.91 39.75 3.82
926 1199 2.514592 GCAGAAGCTATGCCGCCA 60.515 61.111 11.82 0.00 37.73 5.69
929 1202 0.309922 CAGAAGCTATGCCGCCATTG 59.690 55.000 0.00 0.00 32.85 2.82
930 1203 1.008079 GAAGCTATGCCGCCATTGC 60.008 57.895 4.65 4.65 46.20 3.56
931 1204 2.412037 GAAGCTATGCCGCCATTGCC 62.412 60.000 9.09 0.00 46.77 4.52
932 1205 3.218470 GCTATGCCGCCATTGCCA 61.218 61.111 1.29 0.00 42.07 4.92
933 1206 2.567497 GCTATGCCGCCATTGCCAT 61.567 57.895 1.29 0.00 42.07 4.40
934 1207 2.043625 CTATGCCGCCATTGCCATT 58.956 52.632 0.00 0.00 32.85 3.16
946 1221 1.832883 TTGCCATTTAGCCACGACAT 58.167 45.000 0.00 0.00 0.00 3.06
1129 1407 2.123632 AGGAGGCCCTGAAGCTGA 59.876 61.111 0.00 0.00 42.42 4.26
1138 1416 2.032376 TGAAGCTGATGCCGTGCA 59.968 55.556 1.01 1.01 44.86 4.57
1165 1443 3.082055 GGAAGGACCCGGACTCCC 61.082 72.222 0.73 0.00 0.00 4.30
1212 1490 2.866726 GCAGGAGATCGGGGAGAGC 61.867 68.421 0.00 0.00 35.01 4.09
1368 1646 3.091417 GTTACGCGCTGTTTGATTCATC 58.909 45.455 5.73 0.00 0.00 2.92
1372 1650 1.853646 GCGCTGTTTGATTCATCGCTC 60.854 52.381 0.00 0.00 43.71 5.03
1445 1723 0.108992 TGGGCGAGTAATCACGTGTC 60.109 55.000 16.51 4.13 0.00 3.67
1453 1731 5.389516 GCGAGTAATCACGTGTCATTTTTCT 60.390 40.000 16.51 8.19 0.00 2.52
1454 1732 6.590357 CGAGTAATCACGTGTCATTTTTCTT 58.410 36.000 16.51 0.00 0.00 2.52
1455 1733 7.069569 CGAGTAATCACGTGTCATTTTTCTTT 58.930 34.615 16.51 0.00 0.00 2.52
1456 1734 7.058354 CGAGTAATCACGTGTCATTTTTCTTTG 59.942 37.037 16.51 3.23 0.00 2.77
1576 2269 3.306973 CGTATGCAGACACCAGTACATTG 59.693 47.826 12.67 0.00 0.00 2.82
1577 2270 2.928801 TGCAGACACCAGTACATTGT 57.071 45.000 0.00 0.00 0.00 2.71
1578 2271 4.551702 ATGCAGACACCAGTACATTGTA 57.448 40.909 0.00 0.00 0.00 2.41
1579 2272 4.551702 TGCAGACACCAGTACATTGTAT 57.448 40.909 0.00 0.00 0.00 2.29
1580 2273 4.252878 TGCAGACACCAGTACATTGTATG 58.747 43.478 10.24 10.24 35.91 2.39
1582 2275 4.622933 GCAGACACCAGTACATTGTATGGA 60.623 45.833 21.81 0.00 33.90 3.41
1583 2276 5.111989 CAGACACCAGTACATTGTATGGAG 58.888 45.833 21.81 18.21 36.62 3.86
1584 2277 4.777896 AGACACCAGTACATTGTATGGAGT 59.222 41.667 21.81 20.17 39.00 3.85
1585 2278 4.832248 ACACCAGTACATTGTATGGAGTG 58.168 43.478 21.81 17.59 42.95 3.51
1586 2279 4.286032 ACACCAGTACATTGTATGGAGTGT 59.714 41.667 21.81 18.02 41.97 3.55
1587 2280 5.221843 ACACCAGTACATTGTATGGAGTGTT 60.222 40.000 21.81 0.00 41.97 3.32
1590 2428 5.937540 CCAGTACATTGTATGGAGTGTTCAA 59.062 40.000 14.92 0.00 41.97 2.69
1620 2458 8.579863 AGACCATAGATTCTTTTCTTTTTGTGG 58.420 33.333 0.00 0.00 0.00 4.17
1622 2460 7.508977 ACCATAGATTCTTTTCTTTTTGTGGGA 59.491 33.333 0.00 0.00 0.00 4.37
1623 2461 8.534496 CCATAGATTCTTTTCTTTTTGTGGGAT 58.466 33.333 0.00 0.00 0.00 3.85
1624 2462 9.933723 CATAGATTCTTTTCTTTTTGTGGGATT 57.066 29.630 0.00 0.00 0.00 3.01
1633 2471 8.840833 TTTCTTTTTGTGGGATTAAATAAGGC 57.159 30.769 0.00 0.00 0.00 4.35
1634 2472 7.790782 TCTTTTTGTGGGATTAAATAAGGCT 57.209 32.000 0.00 0.00 0.00 4.58
1635 2473 7.610865 TCTTTTTGTGGGATTAAATAAGGCTG 58.389 34.615 0.00 0.00 0.00 4.85
1636 2474 7.453126 TCTTTTTGTGGGATTAAATAAGGCTGA 59.547 33.333 0.00 0.00 0.00 4.26
1637 2475 7.732222 TTTTGTGGGATTAAATAAGGCTGAT 57.268 32.000 0.00 0.00 0.00 2.90
1646 2487 8.295288 GGATTAAATAAGGCTGATGATTCTGTG 58.705 37.037 0.00 0.00 0.00 3.66
1657 2498 7.012704 GGCTGATGATTCTGTGTGTATACAAAT 59.987 37.037 7.25 3.25 38.82 2.32
1658 2499 8.400947 GCTGATGATTCTGTGTGTATACAAATT 58.599 33.333 7.25 0.00 38.82 1.82
1670 2511 9.787435 GTGTGTATACAAATTCCTATAATCCCA 57.213 33.333 7.25 0.00 38.82 4.37
1730 2571 2.135139 GAAACACTGTCACGCTGATCA 58.865 47.619 0.00 0.00 0.00 2.92
1737 2578 1.275010 TGTCACGCTGATCAAGGCTTA 59.725 47.619 0.00 0.00 0.00 3.09
1767 2608 9.345517 CTGTGTATGAAATCATTCGACAAATTT 57.654 29.630 0.55 0.00 36.41 1.82
1769 2610 9.340695 GTGTATGAAATCATTCGACAAATTTGA 57.659 29.630 24.64 2.30 36.41 2.69
1878 3747 6.255453 GCAACAAAAGTGTAAAAGCAATGAGA 59.745 34.615 0.00 0.00 36.80 3.27
1916 3785 3.018973 GCTTTGGCGACGTGTCAA 58.981 55.556 0.00 0.00 41.33 3.18
1917 3786 1.368850 GCTTTGGCGACGTGTCAAC 60.369 57.895 0.00 0.00 43.12 3.18
1918 3787 2.010670 CTTTGGCGACGTGTCAACA 58.989 52.632 0.00 0.00 43.12 3.33
1919 3788 0.315869 CTTTGGCGACGTGTCAACAC 60.316 55.000 0.00 3.13 43.12 3.32
1920 3789 1.019805 TTTGGCGACGTGTCAACACA 61.020 50.000 13.30 0.00 43.12 3.72
1921 3790 3.179186 TTTGGCGACGTGTCAACACAC 62.179 52.381 13.30 1.79 43.12 3.82
2024 3897 2.974698 CCAAGCCCGCATCGATCC 60.975 66.667 0.00 0.00 0.00 3.36
2038 3911 2.764128 ATCCCAGCCGTCCATCGT 60.764 61.111 0.00 0.00 37.94 3.73
2039 3912 2.978452 GATCCCAGCCGTCCATCGTG 62.978 65.000 0.00 0.00 37.94 4.35
2430 4303 0.741221 CCTCTGGAAGGTAAGCACGC 60.741 60.000 0.00 0.00 40.67 5.34
2433 4306 1.626654 CTGGAAGGTAAGCACGCACG 61.627 60.000 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.574284 TCAAAGGGAATTTCATGTGCG 57.426 42.857 0.00 0.00 0.00 5.34
3 4 4.021192 TCCTTCAAAGGGAATTTCATGTGC 60.021 41.667 8.89 0.00 46.47 4.57
4 5 5.726980 TCCTTCAAAGGGAATTTCATGTG 57.273 39.130 8.89 0.00 46.47 3.21
6 7 8.474710 AGATATCCTTCAAAGGGAATTTCATG 57.525 34.615 8.89 0.00 46.47 3.07
13 14 9.408648 GTCAAATAAGATATCCTTCAAAGGGAA 57.591 33.333 8.89 0.00 46.47 3.97
14 15 8.781951 AGTCAAATAAGATATCCTTCAAAGGGA 58.218 33.333 8.89 0.00 46.47 4.20
15 16 8.986929 AGTCAAATAAGATATCCTTCAAAGGG 57.013 34.615 8.89 0.00 46.47 3.95
32 33 9.667107 GCCCAAGTATAGCATAATAGTCAAATA 57.333 33.333 0.00 0.00 0.00 1.40
33 34 8.163408 TGCCCAAGTATAGCATAATAGTCAAAT 58.837 33.333 0.00 0.00 0.00 2.32
34 35 7.513856 TGCCCAAGTATAGCATAATAGTCAAA 58.486 34.615 0.00 0.00 0.00 2.69
35 36 7.073457 TGCCCAAGTATAGCATAATAGTCAA 57.927 36.000 0.00 0.00 0.00 3.18
36 37 6.680148 TGCCCAAGTATAGCATAATAGTCA 57.320 37.500 0.00 0.00 0.00 3.41
37 38 7.361286 GCTTTGCCCAAGTATAGCATAATAGTC 60.361 40.741 0.00 0.00 36.20 2.59
38 39 6.431234 GCTTTGCCCAAGTATAGCATAATAGT 59.569 38.462 0.00 0.00 36.20 2.12
39 40 6.127897 GGCTTTGCCCAAGTATAGCATAATAG 60.128 42.308 0.00 0.00 44.06 1.73
40 41 5.710099 GGCTTTGCCCAAGTATAGCATAATA 59.290 40.000 0.00 0.00 44.06 0.98
41 42 4.524328 GGCTTTGCCCAAGTATAGCATAAT 59.476 41.667 0.00 0.00 44.06 1.28
42 43 3.888930 GGCTTTGCCCAAGTATAGCATAA 59.111 43.478 0.00 0.00 44.06 1.90
43 44 3.486383 GGCTTTGCCCAAGTATAGCATA 58.514 45.455 0.00 0.00 44.06 3.14
44 45 2.310538 GGCTTTGCCCAAGTATAGCAT 58.689 47.619 0.00 0.00 44.06 3.79
45 46 1.762708 GGCTTTGCCCAAGTATAGCA 58.237 50.000 0.00 0.00 44.06 3.49
57 58 3.058639 GGATATTGTCTCGATGGCTTTGC 60.059 47.826 0.00 0.00 0.00 3.68
58 59 4.129380 TGGATATTGTCTCGATGGCTTTG 58.871 43.478 0.00 0.00 0.00 2.77
59 60 4.422073 TGGATATTGTCTCGATGGCTTT 57.578 40.909 0.00 0.00 0.00 3.51
60 61 4.040829 TGATGGATATTGTCTCGATGGCTT 59.959 41.667 0.00 0.00 0.00 4.35
61 62 3.580022 TGATGGATATTGTCTCGATGGCT 59.420 43.478 0.00 0.00 0.00 4.75
62 63 3.681897 GTGATGGATATTGTCTCGATGGC 59.318 47.826 0.00 0.00 0.00 4.40
63 64 4.248859 GGTGATGGATATTGTCTCGATGG 58.751 47.826 0.00 0.00 0.00 3.51
64 65 4.886579 TGGTGATGGATATTGTCTCGATG 58.113 43.478 0.00 0.00 0.00 3.84
65 66 4.020751 CCTGGTGATGGATATTGTCTCGAT 60.021 45.833 0.00 0.00 0.00 3.59
66 67 3.321968 CCTGGTGATGGATATTGTCTCGA 59.678 47.826 0.00 0.00 0.00 4.04
67 68 3.321968 TCCTGGTGATGGATATTGTCTCG 59.678 47.826 0.00 0.00 0.00 4.04
68 69 4.963318 TCCTGGTGATGGATATTGTCTC 57.037 45.455 0.00 0.00 0.00 3.36
69 70 4.971282 TCTTCCTGGTGATGGATATTGTCT 59.029 41.667 0.00 0.00 33.09 3.41
70 71 5.296151 TCTTCCTGGTGATGGATATTGTC 57.704 43.478 0.00 0.00 33.09 3.18
71 72 5.429762 TCTTCTTCCTGGTGATGGATATTGT 59.570 40.000 0.00 0.00 33.09 2.71
72 73 5.933617 TCTTCTTCCTGGTGATGGATATTG 58.066 41.667 0.00 0.00 33.09 1.90
73 74 5.907662 TCTCTTCTTCCTGGTGATGGATATT 59.092 40.000 0.00 0.00 33.09 1.28
74 75 5.471424 TCTCTTCTTCCTGGTGATGGATAT 58.529 41.667 0.00 0.00 33.09 1.63
75 76 4.883759 TCTCTTCTTCCTGGTGATGGATA 58.116 43.478 0.00 0.00 33.09 2.59
76 77 3.729108 TCTCTTCTTCCTGGTGATGGAT 58.271 45.455 0.00 0.00 33.09 3.41
77 78 3.190383 TCTCTTCTTCCTGGTGATGGA 57.810 47.619 0.00 0.00 0.00 3.41
78 79 3.871485 CTTCTCTTCTTCCTGGTGATGG 58.129 50.000 0.00 0.00 0.00 3.51
79 80 3.269178 GCTTCTCTTCTTCCTGGTGATG 58.731 50.000 0.00 0.00 0.00 3.07
80 81 2.093764 CGCTTCTCTTCTTCCTGGTGAT 60.094 50.000 0.00 0.00 0.00 3.06
81 82 1.273606 CGCTTCTCTTCTTCCTGGTGA 59.726 52.381 0.00 0.00 0.00 4.02
82 83 1.273606 TCGCTTCTCTTCTTCCTGGTG 59.726 52.381 0.00 0.00 0.00 4.17
83 84 1.633774 TCGCTTCTCTTCTTCCTGGT 58.366 50.000 0.00 0.00 0.00 4.00
84 85 2.615869 CTTCGCTTCTCTTCTTCCTGG 58.384 52.381 0.00 0.00 0.00 4.45
85 86 1.999024 GCTTCGCTTCTCTTCTTCCTG 59.001 52.381 0.00 0.00 0.00 3.86
86 87 1.899142 AGCTTCGCTTCTCTTCTTCCT 59.101 47.619 0.00 0.00 33.89 3.36
87 88 2.378445 AGCTTCGCTTCTCTTCTTCC 57.622 50.000 0.00 0.00 33.89 3.46
88 89 6.270064 ACTTATAGCTTCGCTTCTCTTCTTC 58.730 40.000 0.00 0.00 40.44 2.87
89 90 6.215495 ACTTATAGCTTCGCTTCTCTTCTT 57.785 37.500 0.00 0.00 40.44 2.52
90 91 5.845391 ACTTATAGCTTCGCTTCTCTTCT 57.155 39.130 0.00 0.00 40.44 2.85
91 92 6.270064 AGAACTTATAGCTTCGCTTCTCTTC 58.730 40.000 0.00 0.00 40.44 2.87
92 93 6.215495 AGAACTTATAGCTTCGCTTCTCTT 57.785 37.500 0.00 0.00 40.44 2.85
93 94 5.845391 AGAACTTATAGCTTCGCTTCTCT 57.155 39.130 0.00 0.00 40.44 3.10
94 95 6.895607 AAAGAACTTATAGCTTCGCTTCTC 57.104 37.500 0.00 0.00 40.44 2.87
95 96 6.981559 CCTAAAGAACTTATAGCTTCGCTTCT 59.018 38.462 0.00 0.00 40.44 2.85
96 97 6.979238 TCCTAAAGAACTTATAGCTTCGCTTC 59.021 38.462 0.00 0.00 40.44 3.86
97 98 6.875076 TCCTAAAGAACTTATAGCTTCGCTT 58.125 36.000 0.00 0.00 40.44 4.68
98 99 6.466885 TCCTAAAGAACTTATAGCTTCGCT 57.533 37.500 0.00 0.00 43.41 4.93
99 100 8.813643 TTATCCTAAAGAACTTATAGCTTCGC 57.186 34.615 0.00 0.00 0.00 4.70
123 124 8.924303 TGCTACAATACTGTATATCTCAGGTTT 58.076 33.333 0.00 3.66 37.41 3.27
124 125 8.478775 TGCTACAATACTGTATATCTCAGGTT 57.521 34.615 0.00 4.76 37.41 3.50
125 126 8.478775 TTGCTACAATACTGTATATCTCAGGT 57.521 34.615 0.00 4.00 37.41 4.00
126 127 9.363763 CATTGCTACAATACTGTATATCTCAGG 57.636 37.037 0.00 0.00 37.41 3.86
127 128 9.363763 CCATTGCTACAATACTGTATATCTCAG 57.636 37.037 0.00 6.36 37.41 3.35
128 129 8.870116 ACCATTGCTACAATACTGTATATCTCA 58.130 33.333 0.00 0.00 37.41 3.27
129 130 9.360093 GACCATTGCTACAATACTGTATATCTC 57.640 37.037 0.00 0.00 37.41 2.75
130 131 8.029522 CGACCATTGCTACAATACTGTATATCT 58.970 37.037 0.00 0.00 37.41 1.98
131 132 8.027189 TCGACCATTGCTACAATACTGTATATC 58.973 37.037 0.00 0.00 37.41 1.63
132 133 7.892609 TCGACCATTGCTACAATACTGTATAT 58.107 34.615 0.00 0.00 37.41 0.86
133 134 7.279750 TCGACCATTGCTACAATACTGTATA 57.720 36.000 0.00 0.00 37.41 1.47
134 135 6.156748 TCGACCATTGCTACAATACTGTAT 57.843 37.500 0.00 0.00 37.41 2.29
135 136 5.585820 TCGACCATTGCTACAATACTGTA 57.414 39.130 0.00 0.00 36.96 2.74
136 137 4.465632 TCGACCATTGCTACAATACTGT 57.534 40.909 0.00 0.00 39.75 3.55
137 138 5.991328 ATTCGACCATTGCTACAATACTG 57.009 39.130 0.00 0.00 0.00 2.74
138 139 5.880332 ACAATTCGACCATTGCTACAATACT 59.120 36.000 9.28 0.00 37.63 2.12
139 140 6.119144 ACAATTCGACCATTGCTACAATAC 57.881 37.500 9.28 0.00 37.63 1.89
140 141 6.550843 CAACAATTCGACCATTGCTACAATA 58.449 36.000 9.28 0.00 37.63 1.90
141 142 5.401550 CAACAATTCGACCATTGCTACAAT 58.598 37.500 9.28 0.00 37.63 2.71
142 143 4.793071 CAACAATTCGACCATTGCTACAA 58.207 39.130 9.28 0.00 37.63 2.41
143 144 3.365868 GCAACAATTCGACCATTGCTACA 60.366 43.478 9.28 0.00 41.88 2.74
144 145 3.171277 GCAACAATTCGACCATTGCTAC 58.829 45.455 9.28 0.00 41.88 3.58
145 146 2.816672 TGCAACAATTCGACCATTGCTA 59.183 40.909 18.30 7.30 44.69 3.49
146 147 1.612950 TGCAACAATTCGACCATTGCT 59.387 42.857 18.30 3.04 44.69 3.91
147 148 2.063156 TGCAACAATTCGACCATTGC 57.937 45.000 9.28 11.45 44.66 3.56
148 149 3.792956 GCTATGCAACAATTCGACCATTG 59.207 43.478 8.04 8.04 39.67 2.82
149 150 3.181487 GGCTATGCAACAATTCGACCATT 60.181 43.478 0.00 0.00 0.00 3.16
150 151 2.358898 GGCTATGCAACAATTCGACCAT 59.641 45.455 0.00 0.00 0.00 3.55
151 152 1.742831 GGCTATGCAACAATTCGACCA 59.257 47.619 0.00 0.00 0.00 4.02
152 153 1.065551 GGGCTATGCAACAATTCGACC 59.934 52.381 0.00 0.00 0.00 4.79
153 154 1.065551 GGGGCTATGCAACAATTCGAC 59.934 52.381 0.00 0.00 0.00 4.20
154 155 1.388547 GGGGCTATGCAACAATTCGA 58.611 50.000 0.00 0.00 0.00 3.71
155 156 0.385390 GGGGGCTATGCAACAATTCG 59.615 55.000 0.00 0.00 0.00 3.34
156 157 1.683385 GAGGGGGCTATGCAACAATTC 59.317 52.381 0.00 0.00 0.00 2.17
157 158 1.288932 AGAGGGGGCTATGCAACAATT 59.711 47.619 0.00 0.00 0.00 2.32
158 159 0.929244 AGAGGGGGCTATGCAACAAT 59.071 50.000 0.00 0.00 0.00 2.71
159 160 1.590591 TAGAGGGGGCTATGCAACAA 58.409 50.000 0.00 0.00 0.00 2.83
160 161 1.819753 ATAGAGGGGGCTATGCAACA 58.180 50.000 0.00 0.00 30.17 3.33
161 162 2.959465 AATAGAGGGGGCTATGCAAC 57.041 50.000 0.00 0.00 31.69 4.17
162 163 3.056080 AGAAATAGAGGGGGCTATGCAA 58.944 45.455 0.00 0.00 31.69 4.08
163 164 2.706350 AGAAATAGAGGGGGCTATGCA 58.294 47.619 0.00 0.00 31.69 3.96
164 165 3.181439 ACAAGAAATAGAGGGGGCTATGC 60.181 47.826 0.00 0.00 31.69 3.14
165 166 4.392940 CACAAGAAATAGAGGGGGCTATG 58.607 47.826 0.00 0.00 31.69 2.23
166 167 3.395941 CCACAAGAAATAGAGGGGGCTAT 59.604 47.826 0.00 0.00 32.60 2.97
167 168 2.777692 CCACAAGAAATAGAGGGGGCTA 59.222 50.000 0.00 0.00 0.00 3.93
168 169 1.566231 CCACAAGAAATAGAGGGGGCT 59.434 52.381 0.00 0.00 0.00 5.19
169 170 1.410224 CCCACAAGAAATAGAGGGGGC 60.410 57.143 0.00 0.00 32.67 5.80
170 171 1.410224 GCCCACAAGAAATAGAGGGGG 60.410 57.143 0.00 0.00 36.31 5.40
171 172 1.566231 AGCCCACAAGAAATAGAGGGG 59.434 52.381 0.00 0.00 36.31 4.79
172 173 3.372440 AAGCCCACAAGAAATAGAGGG 57.628 47.619 0.00 0.00 38.51 4.30
173 174 3.445096 CCAAAGCCCACAAGAAATAGAGG 59.555 47.826 0.00 0.00 0.00 3.69
174 175 3.445096 CCCAAAGCCCACAAGAAATAGAG 59.555 47.826 0.00 0.00 0.00 2.43
175 176 3.181423 ACCCAAAGCCCACAAGAAATAGA 60.181 43.478 0.00 0.00 0.00 1.98
176 177 3.165071 ACCCAAAGCCCACAAGAAATAG 58.835 45.455 0.00 0.00 0.00 1.73
177 178 3.161866 GACCCAAAGCCCACAAGAAATA 58.838 45.455 0.00 0.00 0.00 1.40
178 179 1.970640 GACCCAAAGCCCACAAGAAAT 59.029 47.619 0.00 0.00 0.00 2.17
179 180 1.063266 AGACCCAAAGCCCACAAGAAA 60.063 47.619 0.00 0.00 0.00 2.52
180 181 0.555769 AGACCCAAAGCCCACAAGAA 59.444 50.000 0.00 0.00 0.00 2.52
181 182 0.178992 CAGACCCAAAGCCCACAAGA 60.179 55.000 0.00 0.00 0.00 3.02
182 183 1.181098 CCAGACCCAAAGCCCACAAG 61.181 60.000 0.00 0.00 0.00 3.16
183 184 1.152567 CCAGACCCAAAGCCCACAA 60.153 57.895 0.00 0.00 0.00 3.33
184 185 2.520458 CCAGACCCAAAGCCCACA 59.480 61.111 0.00 0.00 0.00 4.17
185 186 2.991540 GCCAGACCCAAAGCCCAC 60.992 66.667 0.00 0.00 0.00 4.61
186 187 3.185203 AGCCAGACCCAAAGCCCA 61.185 61.111 0.00 0.00 0.00 5.36
187 188 2.677875 CAGCCAGACCCAAAGCCC 60.678 66.667 0.00 0.00 0.00 5.19
188 189 1.676967 CTCAGCCAGACCCAAAGCC 60.677 63.158 0.00 0.00 0.00 4.35
189 190 0.957888 GTCTCAGCCAGACCCAAAGC 60.958 60.000 2.49 0.00 45.47 3.51
190 191 3.239861 GTCTCAGCCAGACCCAAAG 57.760 57.895 2.49 0.00 45.47 2.77
197 198 2.659016 CAAGCCGTCTCAGCCAGA 59.341 61.111 0.00 0.00 0.00 3.86
198 199 3.123620 GCAAGCCGTCTCAGCCAG 61.124 66.667 0.00 0.00 0.00 4.85
204 205 8.277713 TAATTATTAATTAACGCAAGCCGTCTC 58.722 33.333 0.00 0.00 39.68 3.36
205 206 8.145316 TAATTATTAATTAACGCAAGCCGTCT 57.855 30.769 0.00 0.00 39.68 4.18
206 207 8.770850 TTAATTATTAATTAACGCAAGCCGTC 57.229 30.769 14.71 0.00 39.68 4.79
207 208 9.176181 CATTAATTATTAATTAACGCAAGCCGT 57.824 29.630 19.05 3.15 43.78 5.68
208 209 8.635124 CCATTAATTATTAATTAACGCAAGCCG 58.365 33.333 19.05 0.32 43.78 5.52
209 210 9.471084 ACCATTAATTATTAATTAACGCAAGCC 57.529 29.630 19.05 0.00 43.78 4.35
226 227 9.351570 CAAAAAGCACAAACAAAACCATTAATT 57.648 25.926 0.00 0.00 0.00 1.40
227 228 8.518702 ACAAAAAGCACAAACAAAACCATTAAT 58.481 25.926 0.00 0.00 0.00 1.40
228 229 7.805071 CACAAAAAGCACAAACAAAACCATTAA 59.195 29.630 0.00 0.00 0.00 1.40
229 230 7.301054 CACAAAAAGCACAAACAAAACCATTA 58.699 30.769 0.00 0.00 0.00 1.90
230 231 6.148264 CACAAAAAGCACAAACAAAACCATT 58.852 32.000 0.00 0.00 0.00 3.16
231 232 5.335504 CCACAAAAAGCACAAACAAAACCAT 60.336 36.000 0.00 0.00 0.00 3.55
232 233 4.023707 CCACAAAAAGCACAAACAAAACCA 60.024 37.500 0.00 0.00 0.00 3.67
233 234 4.214332 TCCACAAAAAGCACAAACAAAACC 59.786 37.500 0.00 0.00 0.00 3.27
234 235 5.349824 TCCACAAAAAGCACAAACAAAAC 57.650 34.783 0.00 0.00 0.00 2.43
235 236 6.566197 ATTCCACAAAAAGCACAAACAAAA 57.434 29.167 0.00 0.00 0.00 2.44
236 237 6.566197 AATTCCACAAAAAGCACAAACAAA 57.434 29.167 0.00 0.00 0.00 2.83
237 238 6.566197 AAATTCCACAAAAAGCACAAACAA 57.434 29.167 0.00 0.00 0.00 2.83
238 239 6.566197 AAAATTCCACAAAAAGCACAAACA 57.434 29.167 0.00 0.00 0.00 2.83
260 261 2.748532 CGCGTTATTAGGGTCCCAAAAA 59.251 45.455 11.55 1.47 0.00 1.94
261 262 2.290197 ACGCGTTATTAGGGTCCCAAAA 60.290 45.455 5.58 4.28 0.00 2.44
262 263 1.278699 ACGCGTTATTAGGGTCCCAAA 59.721 47.619 5.58 0.00 0.00 3.28
263 264 0.903942 ACGCGTTATTAGGGTCCCAA 59.096 50.000 5.58 2.83 0.00 4.12
264 265 0.176219 CACGCGTTATTAGGGTCCCA 59.824 55.000 10.22 0.00 32.26 4.37
265 266 0.531311 CCACGCGTTATTAGGGTCCC 60.531 60.000 10.22 0.00 32.26 4.46
266 267 0.461135 TCCACGCGTTATTAGGGTCC 59.539 55.000 10.22 0.00 32.26 4.46
267 268 2.132762 CATCCACGCGTTATTAGGGTC 58.867 52.381 10.22 0.00 32.26 4.46
268 269 1.758280 TCATCCACGCGTTATTAGGGT 59.242 47.619 10.22 0.00 35.05 4.34
269 270 2.132762 GTCATCCACGCGTTATTAGGG 58.867 52.381 10.22 6.91 0.00 3.53
270 271 2.816689 TGTCATCCACGCGTTATTAGG 58.183 47.619 10.22 7.81 0.00 2.69
271 272 3.863424 AGTTGTCATCCACGCGTTATTAG 59.137 43.478 10.22 0.00 0.00 1.73
272 273 3.852286 AGTTGTCATCCACGCGTTATTA 58.148 40.909 10.22 0.00 0.00 0.98
273 274 2.695359 AGTTGTCATCCACGCGTTATT 58.305 42.857 10.22 0.00 0.00 1.40
274 275 2.380084 AGTTGTCATCCACGCGTTAT 57.620 45.000 10.22 2.91 0.00 1.89
275 276 2.157834 AAGTTGTCATCCACGCGTTA 57.842 45.000 10.22 0.00 0.00 3.18
276 277 1.305201 AAAGTTGTCATCCACGCGTT 58.695 45.000 10.22 0.00 0.00 4.84
277 278 2.066262 CTAAAGTTGTCATCCACGCGT 58.934 47.619 5.58 5.58 0.00 6.01
278 279 2.066262 ACTAAAGTTGTCATCCACGCG 58.934 47.619 3.53 3.53 0.00 6.01
290 291 3.636300 TGCCATGCTTCACAACTAAAGTT 59.364 39.130 0.00 0.00 39.12 2.66
291 292 3.221771 TGCCATGCTTCACAACTAAAGT 58.778 40.909 0.00 0.00 0.00 2.66
292 293 3.921119 TGCCATGCTTCACAACTAAAG 57.079 42.857 0.00 0.00 0.00 1.85
293 294 3.976169 GTTGCCATGCTTCACAACTAAA 58.024 40.909 0.00 0.00 39.39 1.85
294 295 3.641437 GTTGCCATGCTTCACAACTAA 57.359 42.857 0.00 0.00 39.39 2.24
296 297 1.696063 AGTTGCCATGCTTCACAACT 58.304 45.000 9.70 9.70 45.86 3.16
297 298 2.514205 AAGTTGCCATGCTTCACAAC 57.486 45.000 0.00 0.00 42.08 3.32
298 299 2.543445 CGAAAGTTGCCATGCTTCACAA 60.543 45.455 0.00 0.00 0.00 3.33
299 300 1.001487 CGAAAGTTGCCATGCTTCACA 60.001 47.619 0.00 0.00 0.00 3.58
300 301 1.689959 CGAAAGTTGCCATGCTTCAC 58.310 50.000 0.00 0.00 0.00 3.18
301 302 0.039256 GCGAAAGTTGCCATGCTTCA 60.039 50.000 0.00 0.00 0.00 3.02
302 303 1.067199 CGCGAAAGTTGCCATGCTTC 61.067 55.000 0.00 0.00 0.00 3.86
303 304 1.081242 CGCGAAAGTTGCCATGCTT 60.081 52.632 0.00 0.00 0.00 3.91
304 305 2.562912 CGCGAAAGTTGCCATGCT 59.437 55.556 0.00 0.00 0.00 3.79
305 306 2.504681 CCGCGAAAGTTGCCATGC 60.505 61.111 8.23 0.00 0.00 4.06
306 307 0.729140 GAACCGCGAAAGTTGCCATG 60.729 55.000 8.23 0.00 0.00 3.66
307 308 1.169661 TGAACCGCGAAAGTTGCCAT 61.170 50.000 8.23 0.00 0.00 4.40
308 309 1.781025 CTGAACCGCGAAAGTTGCCA 61.781 55.000 8.23 0.00 0.00 4.92
309 310 1.082104 CTGAACCGCGAAAGTTGCC 60.082 57.895 8.23 0.00 0.00 4.52
310 311 0.028902 AACTGAACCGCGAAAGTTGC 59.971 50.000 8.23 0.00 31.82 4.17
311 312 2.468532 AAACTGAACCGCGAAAGTTG 57.531 45.000 8.23 0.00 33.30 3.16
312 313 4.823790 AATAAACTGAACCGCGAAAGTT 57.176 36.364 8.23 8.77 34.40 2.66
313 314 4.823790 AAATAAACTGAACCGCGAAAGT 57.176 36.364 8.23 1.96 0.00 2.66
314 315 5.683743 TCAAAAATAAACTGAACCGCGAAAG 59.316 36.000 8.23 1.23 0.00 2.62
315 316 5.579718 TCAAAAATAAACTGAACCGCGAAA 58.420 33.333 8.23 0.00 0.00 3.46
316 317 5.171147 TCAAAAATAAACTGAACCGCGAA 57.829 34.783 8.23 0.00 0.00 4.70
317 318 4.815040 TCAAAAATAAACTGAACCGCGA 57.185 36.364 8.23 0.00 0.00 5.87
318 319 6.539324 TCTATCAAAAATAAACTGAACCGCG 58.461 36.000 0.00 0.00 0.00 6.46
319 320 8.635983 GTTTCTATCAAAAATAAACTGAACCGC 58.364 33.333 0.00 0.00 0.00 5.68
320 321 9.893305 AGTTTCTATCAAAAATAAACTGAACCG 57.107 29.630 0.00 0.00 38.57 4.44
331 332 9.301153 GACACACAACAAGTTTCTATCAAAAAT 57.699 29.630 0.00 0.00 0.00 1.82
332 333 8.300286 TGACACACAACAAGTTTCTATCAAAAA 58.700 29.630 0.00 0.00 0.00 1.94
333 334 7.753132 GTGACACACAACAAGTTTCTATCAAAA 59.247 33.333 0.00 0.00 34.08 2.44
334 335 7.120579 AGTGACACACAACAAGTTTCTATCAAA 59.879 33.333 8.59 0.00 36.74 2.69
335 336 6.597672 AGTGACACACAACAAGTTTCTATCAA 59.402 34.615 8.59 0.00 36.74 2.57
336 337 6.037062 CAGTGACACACAACAAGTTTCTATCA 59.963 38.462 8.59 0.00 36.74 2.15
337 338 6.257849 TCAGTGACACACAACAAGTTTCTATC 59.742 38.462 8.59 0.00 36.74 2.08
338 339 6.112734 TCAGTGACACACAACAAGTTTCTAT 58.887 36.000 8.59 0.00 36.74 1.98
339 340 5.483811 TCAGTGACACACAACAAGTTTCTA 58.516 37.500 8.59 0.00 36.74 2.10
340 341 4.323417 TCAGTGACACACAACAAGTTTCT 58.677 39.130 8.59 0.00 36.74 2.52
341 342 4.678509 TCAGTGACACACAACAAGTTTC 57.321 40.909 8.59 0.00 36.74 2.78
342 343 5.446143 TTTCAGTGACACACAACAAGTTT 57.554 34.783 8.59 0.00 36.74 2.66
343 344 5.643379 ATTTCAGTGACACACAACAAGTT 57.357 34.783 8.59 0.00 36.74 2.66
344 345 5.643379 AATTTCAGTGACACACAACAAGT 57.357 34.783 8.59 0.00 36.74 3.16
345 346 5.220265 GCAAATTTCAGTGACACACAACAAG 60.220 40.000 8.59 0.00 36.74 3.16
346 347 4.624882 GCAAATTTCAGTGACACACAACAA 59.375 37.500 8.59 0.00 36.74 2.83
347 348 4.172505 GCAAATTTCAGTGACACACAACA 58.827 39.130 8.59 0.00 36.74 3.33
348 349 3.551485 GGCAAATTTCAGTGACACACAAC 59.449 43.478 8.59 0.00 36.74 3.32
349 350 3.194329 TGGCAAATTTCAGTGACACACAA 59.806 39.130 8.59 0.00 36.74 3.33
350 351 2.757314 TGGCAAATTTCAGTGACACACA 59.243 40.909 8.59 0.00 36.74 3.72
351 352 3.435105 TGGCAAATTTCAGTGACACAC 57.565 42.857 8.59 0.00 34.10 3.82
352 353 3.005684 GGATGGCAAATTTCAGTGACACA 59.994 43.478 8.59 0.00 35.02 3.72
353 354 3.256631 AGGATGGCAAATTTCAGTGACAC 59.743 43.478 0.00 0.00 35.02 3.67
354 355 3.499338 AGGATGGCAAATTTCAGTGACA 58.501 40.909 0.00 0.00 37.13 3.58
355 356 4.240096 CAAGGATGGCAAATTTCAGTGAC 58.760 43.478 0.00 0.00 0.00 3.67
356 357 3.306225 GCAAGGATGGCAAATTTCAGTGA 60.306 43.478 0.00 0.00 32.79 3.41
357 358 2.997986 GCAAGGATGGCAAATTTCAGTG 59.002 45.455 0.00 0.00 32.79 3.66
358 359 2.633967 TGCAAGGATGGCAAATTTCAGT 59.366 40.909 0.00 0.00 46.27 3.41
359 360 3.322211 TGCAAGGATGGCAAATTTCAG 57.678 42.857 0.00 0.00 46.27 3.02
368 369 3.530265 TTTCAATCATGCAAGGATGGC 57.470 42.857 5.14 0.00 35.57 4.40
369 370 9.938280 ATAATAATTTCAATCATGCAAGGATGG 57.062 29.630 5.14 2.86 35.57 3.51
383 384 9.651913 GCCCTGAAGTTTTCATAATAATTTCAA 57.348 29.630 0.00 0.00 39.30 2.69
384 385 8.257306 GGCCCTGAAGTTTTCATAATAATTTCA 58.743 33.333 0.00 0.00 39.30 2.69
385 386 7.435192 CGGCCCTGAAGTTTTCATAATAATTTC 59.565 37.037 0.00 0.00 39.30 2.17
386 387 7.123547 TCGGCCCTGAAGTTTTCATAATAATTT 59.876 33.333 0.00 0.00 39.30 1.82
387 388 6.605594 TCGGCCCTGAAGTTTTCATAATAATT 59.394 34.615 0.00 0.00 39.30 1.40
388 389 6.126409 TCGGCCCTGAAGTTTTCATAATAAT 58.874 36.000 0.00 0.00 39.30 1.28
389 390 5.502079 TCGGCCCTGAAGTTTTCATAATAA 58.498 37.500 0.00 0.00 39.30 1.40
390 391 5.105567 TCGGCCCTGAAGTTTTCATAATA 57.894 39.130 0.00 0.00 39.30 0.98
391 392 3.963129 TCGGCCCTGAAGTTTTCATAAT 58.037 40.909 0.00 0.00 39.30 1.28
392 393 3.426787 TCGGCCCTGAAGTTTTCATAA 57.573 42.857 0.00 0.00 39.30 1.90
393 394 3.343617 CTTCGGCCCTGAAGTTTTCATA 58.656 45.455 11.20 0.00 40.37 2.15
394 395 2.162681 CTTCGGCCCTGAAGTTTTCAT 58.837 47.619 11.20 0.00 40.37 2.57
395 396 1.604604 CTTCGGCCCTGAAGTTTTCA 58.395 50.000 11.20 0.00 40.37 2.69
402 403 0.321564 CATGACACTTCGGCCCTGAA 60.322 55.000 0.00 0.00 0.00 3.02
403 404 1.296392 CATGACACTTCGGCCCTGA 59.704 57.895 0.00 0.00 0.00 3.86
404 405 2.401766 GCATGACACTTCGGCCCTG 61.402 63.158 0.00 0.00 0.00 4.45
405 406 2.045926 GCATGACACTTCGGCCCT 60.046 61.111 0.00 0.00 0.00 5.19
406 407 2.359850 TGCATGACACTTCGGCCC 60.360 61.111 0.00 0.00 0.00 5.80
407 408 2.870372 GTGCATGACACTTCGGCC 59.130 61.111 11.51 0.00 46.41 6.13
423 424 2.290008 TGATAATTGCCACACGTCAGGT 60.290 45.455 4.84 0.00 0.00 4.00
424 425 2.355197 TGATAATTGCCACACGTCAGG 58.645 47.619 0.00 0.00 0.00 3.86
425 426 4.094739 TGATTGATAATTGCCACACGTCAG 59.905 41.667 0.00 0.00 0.00 3.51
426 427 4.006319 TGATTGATAATTGCCACACGTCA 58.994 39.130 0.00 0.00 0.00 4.35
427 428 4.614555 TGATTGATAATTGCCACACGTC 57.385 40.909 0.00 0.00 0.00 4.34
428 429 5.581126 AATGATTGATAATTGCCACACGT 57.419 34.783 0.00 0.00 0.00 4.49
429 430 8.578308 AATAAATGATTGATAATTGCCACACG 57.422 30.769 0.00 0.00 0.00 4.49
430 431 9.754382 AGAATAAATGATTGATAATTGCCACAC 57.246 29.630 0.00 0.00 0.00 3.82
442 443 9.834628 GACGGTACAAAAAGAATAAATGATTGA 57.165 29.630 0.00 0.00 0.00 2.57
443 444 9.840427 AGACGGTACAAAAAGAATAAATGATTG 57.160 29.630 0.00 0.00 0.00 2.67
444 445 9.840427 CAGACGGTACAAAAAGAATAAATGATT 57.160 29.630 0.00 0.00 0.00 2.57
445 446 9.010029 ACAGACGGTACAAAAAGAATAAATGAT 57.990 29.630 0.00 0.00 0.00 2.45
446 447 8.385898 ACAGACGGTACAAAAAGAATAAATGA 57.614 30.769 0.00 0.00 0.00 2.57
447 448 8.901748 CAACAGACGGTACAAAAAGAATAAATG 58.098 33.333 0.00 0.00 0.00 2.32
448 449 8.626526 ACAACAGACGGTACAAAAAGAATAAAT 58.373 29.630 0.00 0.00 0.00 1.40
449 450 7.987649 ACAACAGACGGTACAAAAAGAATAAA 58.012 30.769 0.00 0.00 0.00 1.40
450 451 7.556733 ACAACAGACGGTACAAAAAGAATAA 57.443 32.000 0.00 0.00 0.00 1.40
451 452 8.836268 ATACAACAGACGGTACAAAAAGAATA 57.164 30.769 0.00 0.00 0.00 1.75
452 453 7.739498 ATACAACAGACGGTACAAAAAGAAT 57.261 32.000 0.00 0.00 0.00 2.40
453 454 7.556733 AATACAACAGACGGTACAAAAAGAA 57.443 32.000 0.00 0.00 0.00 2.52
454 455 7.066043 ACAAATACAACAGACGGTACAAAAAGA 59.934 33.333 0.00 0.00 0.00 2.52
455 456 7.190871 ACAAATACAACAGACGGTACAAAAAG 58.809 34.615 0.00 0.00 0.00 2.27
456 457 7.086230 ACAAATACAACAGACGGTACAAAAA 57.914 32.000 0.00 0.00 0.00 1.94
457 458 6.680874 ACAAATACAACAGACGGTACAAAA 57.319 33.333 0.00 0.00 0.00 2.44
458 459 7.095144 CCATACAAATACAACAGACGGTACAAA 60.095 37.037 0.00 0.00 0.00 2.83
459 460 6.369340 CCATACAAATACAACAGACGGTACAA 59.631 38.462 0.00 0.00 0.00 2.41
460 461 5.870433 CCATACAAATACAACAGACGGTACA 59.130 40.000 0.00 0.00 0.00 2.90
461 462 5.870978 ACCATACAAATACAACAGACGGTAC 59.129 40.000 0.00 0.00 0.00 3.34
462 463 6.040209 ACCATACAAATACAACAGACGGTA 57.960 37.500 0.00 0.00 0.00 4.02
463 464 4.901868 ACCATACAAATACAACAGACGGT 58.098 39.130 0.00 0.00 0.00 4.83
464 465 5.873179 AACCATACAAATACAACAGACGG 57.127 39.130 0.00 0.00 0.00 4.79
465 466 7.114247 CCAAAAACCATACAAATACAACAGACG 59.886 37.037 0.00 0.00 0.00 4.18
466 467 7.383843 CCCAAAAACCATACAAATACAACAGAC 59.616 37.037 0.00 0.00 0.00 3.51
467 468 7.437748 CCCAAAAACCATACAAATACAACAGA 58.562 34.615 0.00 0.00 0.00 3.41
468 469 6.147000 GCCCAAAAACCATACAAATACAACAG 59.853 38.462 0.00 0.00 0.00 3.16
469 470 5.992217 GCCCAAAAACCATACAAATACAACA 59.008 36.000 0.00 0.00 0.00 3.33
470 471 5.119434 CGCCCAAAAACCATACAAATACAAC 59.881 40.000 0.00 0.00 0.00 3.32
471 472 5.230942 CGCCCAAAAACCATACAAATACAA 58.769 37.500 0.00 0.00 0.00 2.41
472 473 4.322049 CCGCCCAAAAACCATACAAATACA 60.322 41.667 0.00 0.00 0.00 2.29
473 474 4.177783 CCGCCCAAAAACCATACAAATAC 58.822 43.478 0.00 0.00 0.00 1.89
474 475 3.833070 ACCGCCCAAAAACCATACAAATA 59.167 39.130 0.00 0.00 0.00 1.40
475 476 2.635427 ACCGCCCAAAAACCATACAAAT 59.365 40.909 0.00 0.00 0.00 2.32
627 628 5.060940 CGTACATGGCAATCTATCGTACATG 59.939 44.000 0.00 0.00 39.88 3.21
630 631 4.790878 TCGTACATGGCAATCTATCGTAC 58.209 43.478 0.00 0.00 0.00 3.67
632 633 4.521130 ATCGTACATGGCAATCTATCGT 57.479 40.909 0.00 0.00 0.00 3.73
634 635 7.254252 GCAATCTATCGTACATGGCAATCTATC 60.254 40.741 0.00 0.00 0.00 2.08
635 636 6.536582 GCAATCTATCGTACATGGCAATCTAT 59.463 38.462 0.00 0.00 0.00 1.98
637 638 4.692625 GCAATCTATCGTACATGGCAATCT 59.307 41.667 0.00 0.00 0.00 2.40
638 639 4.142816 GGCAATCTATCGTACATGGCAATC 60.143 45.833 0.00 0.00 33.98 2.67
639 640 3.753272 GGCAATCTATCGTACATGGCAAT 59.247 43.478 0.00 0.00 33.98 3.56
642 643 1.726791 CGGCAATCTATCGTACATGGC 59.273 52.381 0.00 0.00 0.00 4.40
643 644 1.726791 GCGGCAATCTATCGTACATGG 59.273 52.381 0.00 0.00 0.00 3.66
742 889 1.063006 GCACATGCATAGCACACCG 59.937 57.895 16.03 0.00 43.04 4.94
743 890 0.813184 AAGCACATGCATAGCACACC 59.187 50.000 21.15 0.00 43.04 4.16
755 902 4.219944 TGTCCTCTACGTTAAGAAGCACAT 59.780 41.667 0.00 0.00 0.00 3.21
781 928 1.482182 TCAGATTCACCATCCGTCAGG 59.518 52.381 0.00 0.00 39.46 3.86
816 963 2.885644 CGAACCTCGTGATGGGCG 60.886 66.667 0.00 0.00 34.72 6.13
883 1030 3.096092 ACACACAGTGTCCATGGTTTTT 58.904 40.909 12.58 0.00 43.92 1.94
885 1032 2.435372 ACACACAGTGTCCATGGTTT 57.565 45.000 12.58 0.00 43.92 3.27
886 1033 3.788227 ATACACACAGTGTCCATGGTT 57.212 42.857 12.58 0.00 43.92 3.67
887 1034 4.832248 CTTATACACACAGTGTCCATGGT 58.168 43.478 12.58 0.76 43.92 3.55
888 1035 3.623060 GCTTATACACACAGTGTCCATGG 59.377 47.826 4.97 4.97 43.92 3.66
889 1036 4.252878 TGCTTATACACACAGTGTCCATG 58.747 43.478 2.14 0.00 43.92 3.66
890 1037 4.222810 TCTGCTTATACACACAGTGTCCAT 59.777 41.667 2.14 2.53 43.92 3.41
891 1038 3.576550 TCTGCTTATACACACAGTGTCCA 59.423 43.478 2.14 0.00 43.92 4.02
919 1192 1.815196 CTAAATGGCAATGGCGGCA 59.185 52.632 16.34 16.34 46.50 5.69
922 1195 4.736165 GGCTAAATGGCAATGGCG 57.264 55.556 1.51 0.00 42.47 5.69
929 1202 0.304705 CGATGTCGTGGCTAAATGGC 59.695 55.000 0.00 0.00 42.18 4.40
930 1203 0.304705 GCGATGTCGTGGCTAAATGG 59.695 55.000 4.20 0.00 42.22 3.16
931 1204 0.043053 CGCGATGTCGTGGCTAAATG 60.043 55.000 0.00 0.00 45.14 2.32
932 1205 2.297625 CGCGATGTCGTGGCTAAAT 58.702 52.632 0.00 0.00 45.14 1.40
933 1206 3.775314 CGCGATGTCGTGGCTAAA 58.225 55.556 0.00 0.00 45.14 1.85
1138 1416 3.547513 GTCCTTCCCCGCCGCTAT 61.548 66.667 0.00 0.00 0.00 2.97
1195 1473 1.456518 TGCTCTCCCCGATCTCCTG 60.457 63.158 0.00 0.00 0.00 3.86
1368 1646 3.827784 CGAAGAACCACGCGAGCG 61.828 66.667 15.93 16.38 46.03 5.03
1430 1708 6.153212 AGAAAAATGACACGTGATTACTCG 57.847 37.500 25.01 0.00 38.66 4.18
1445 1723 8.110002 GTGTAGTCTGCAAAACAAAGAAAAATG 58.890 33.333 0.00 0.00 0.00 2.32
1453 1731 4.736168 GCATGGTGTAGTCTGCAAAACAAA 60.736 41.667 0.00 0.00 34.77 2.83
1454 1732 3.243367 GCATGGTGTAGTCTGCAAAACAA 60.243 43.478 0.00 0.00 34.77 2.83
1455 1733 2.293122 GCATGGTGTAGTCTGCAAAACA 59.707 45.455 0.00 0.00 34.77 2.83
1456 1734 2.351738 GGCATGGTGTAGTCTGCAAAAC 60.352 50.000 0.00 0.00 36.34 2.43
1617 2455 7.449704 AGAATCATCAGCCTTATTTAATCCCAC 59.550 37.037 0.00 0.00 0.00 4.61
1620 2458 8.295288 CACAGAATCATCAGCCTTATTTAATCC 58.705 37.037 0.00 0.00 0.00 3.01
1622 2460 8.627403 CACACAGAATCATCAGCCTTATTTAAT 58.373 33.333 0.00 0.00 0.00 1.40
1623 2461 7.611467 ACACACAGAATCATCAGCCTTATTTAA 59.389 33.333 0.00 0.00 0.00 1.52
1624 2462 7.112122 ACACACAGAATCATCAGCCTTATTTA 58.888 34.615 0.00 0.00 0.00 1.40
1628 2466 4.558226 ACACACAGAATCATCAGCCTTA 57.442 40.909 0.00 0.00 0.00 2.69
1631 2469 5.359756 TGTATACACACAGAATCATCAGCC 58.640 41.667 0.08 0.00 0.00 4.85
1633 2471 9.926751 GAATTTGTATACACACAGAATCATCAG 57.073 33.333 4.68 0.00 33.30 2.90
1634 2472 8.892723 GGAATTTGTATACACACAGAATCATCA 58.107 33.333 4.68 0.00 33.30 3.07
1635 2473 9.113838 AGGAATTTGTATACACACAGAATCATC 57.886 33.333 4.68 0.00 33.30 2.92
1657 2498 6.292923 CACGTTACCATTGGGATTATAGGAA 58.707 40.000 7.78 0.00 38.05 3.36
1658 2499 5.743714 GCACGTTACCATTGGGATTATAGGA 60.744 44.000 7.78 0.00 38.05 2.94
1670 2511 1.473788 GGATACCCGCACGTTACCATT 60.474 52.381 0.00 0.00 0.00 3.16
1730 2571 5.499004 TTTCATACACAGGAGTAAGCCTT 57.501 39.130 0.00 0.00 35.66 4.35
1737 2578 5.812642 GTCGAATGATTTCATACACAGGAGT 59.187 40.000 0.00 0.00 35.10 3.85
1899 3768 1.368850 GTTGACACGTCGCCAAAGC 60.369 57.895 0.00 0.00 0.00 3.51
1900 3769 0.315869 GTGTTGACACGTCGCCAAAG 60.316 55.000 0.00 0.00 37.10 2.77
1901 3770 1.716760 GTGTTGACACGTCGCCAAA 59.283 52.632 0.00 0.00 37.10 3.28
1902 3771 3.401095 GTGTTGACACGTCGCCAA 58.599 55.556 0.00 0.00 37.10 4.52
1911 3780 2.276201 GTGTAGCACAGTGTGTTGACA 58.724 47.619 23.73 20.18 35.75 3.58
1912 3781 1.257936 CGTGTAGCACAGTGTGTTGAC 59.742 52.381 23.73 18.12 35.75 3.18
1913 3782 1.566404 CGTGTAGCACAGTGTGTTGA 58.434 50.000 23.73 7.28 35.75 3.18
1926 3795 3.409851 TTATGTACGGACTGCGTGTAG 57.590 47.619 5.77 0.00 0.00 2.74
1927 3796 3.489568 CCATTATGTACGGACTGCGTGTA 60.490 47.826 5.77 0.00 0.00 2.90
1935 3804 1.597663 GCTGTGCCATTATGTACGGAC 59.402 52.381 9.02 0.00 0.00 4.79
2038 3911 2.356665 ATGTTACTGGGTGTTGTGCA 57.643 45.000 0.00 0.00 0.00 4.57
2039 3912 2.360801 ACAATGTTACTGGGTGTTGTGC 59.639 45.455 0.00 0.00 0.00 4.57
2040 3913 4.023536 GGTACAATGTTACTGGGTGTTGTG 60.024 45.833 0.00 0.00 32.64 3.33
2148 4021 2.355716 GGACGATTGGATGGAGTGGAAA 60.356 50.000 0.00 0.00 0.00 3.13
2430 4303 2.225791 TAGTAGGCTGCAGTGGCGTG 62.226 60.000 16.64 0.00 45.35 5.34
2433 4306 1.112113 TACTAGTAGGCTGCAGTGGC 58.888 55.000 16.64 3.07 41.68 5.01
2476 4352 0.376852 TTCAGTTCACGTGTGCTTGC 59.623 50.000 16.51 0.98 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.