Multiple sequence alignment - TraesCS2A01G294500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G294500 chr2A 100.000 6620 0 0 1 6620 507068132 507074751 0.000000e+00 12225.0
1 TraesCS2A01G294500 chr2B 92.964 3155 148 27 2792 5893 444543740 444546873 0.000000e+00 4529.0
2 TraesCS2A01G294500 chr2B 93.939 2772 106 23 1 2722 444540968 444543727 0.000000e+00 4132.0
3 TraesCS2A01G294500 chr2B 89.510 143 13 2 5890 6032 444548514 444548654 5.270000e-41 180.0
4 TraesCS2A01G294500 chr2B 89.510 143 13 2 5890 6032 444605370 444605510 5.270000e-41 180.0
5 TraesCS2A01G294500 chr2D 93.601 2969 106 30 3136 6042 374106923 374109869 0.000000e+00 4353.0
6 TraesCS2A01G294500 chr2D 94.711 2817 107 13 257 3033 374104111 374106925 0.000000e+00 4338.0
7 TraesCS2A01G294500 chr2D 90.499 421 31 6 6207 6620 367989456 367989038 1.260000e-151 547.0
8 TraesCS2A01G294500 chr2D 90.754 411 35 2 6212 6619 18301650 18302060 4.510000e-151 545.0
9 TraesCS2A01G294500 chr2D 90.168 417 38 2 6207 6620 6862846 6863262 2.100000e-149 540.0
10 TraesCS2A01G294500 chr2D 90.361 415 33 5 6210 6619 386483261 386482849 7.550000e-149 538.0
11 TraesCS2A01G294500 chr2D 90.909 77 6 1 188 264 374103650 374103725 1.170000e-17 102.0
12 TraesCS2A01G294500 chr4D 90.284 422 34 5 6203 6619 293372157 293372576 4.510000e-151 545.0
13 TraesCS2A01G294500 chr4D 90.000 420 34 7 6203 6617 476862148 476862564 2.720000e-148 536.0
14 TraesCS2A01G294500 chr7D 90.338 414 35 3 6210 6620 565209951 565209540 7.550000e-149 538.0
15 TraesCS2A01G294500 chr1A 90.144 416 37 3 6207 6619 367439662 367439248 7.550000e-149 538.0
16 TraesCS2A01G294500 chr1A 98.276 116 1 1 3029 3143 343396805 343396690 1.130000e-47 202.0
17 TraesCS2A01G294500 chr5D 90.120 415 37 3 6208 6619 431559409 431559822 2.720000e-148 536.0
18 TraesCS2A01G294500 chr5A 98.261 115 2 0 3029 3143 9610329 9610215 1.130000e-47 202.0
19 TraesCS2A01G294500 chr5A 97.458 118 1 2 3026 3141 69844901 69844784 4.050000e-47 200.0
20 TraesCS2A01G294500 chr5A 97.436 117 2 1 3029 3144 299768209 299768325 1.460000e-46 198.0
21 TraesCS2A01G294500 chr5A 95.902 122 3 2 3026 3145 7007442 7007321 5.240000e-46 196.0
22 TraesCS2A01G294500 chr5A 97.391 115 3 0 3032 3146 306879121 306879007 5.240000e-46 196.0
23 TraesCS2A01G294500 chr6A 95.161 124 5 1 3025 3147 183352118 183352241 1.880000e-45 195.0
24 TraesCS2A01G294500 chr3A 93.701 127 7 1 3032 3157 266453453 266453579 8.760000e-44 189.0
25 TraesCS2A01G294500 chr3D 94.000 50 3 0 6103 6152 360634040 360633991 7.120000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G294500 chr2A 507068132 507074751 6619 False 12225 12225 100.000000 1 6620 1 chr2A.!!$F1 6619
1 TraesCS2A01G294500 chr2B 444540968 444548654 7686 False 2947 4529 92.137667 1 6032 3 chr2B.!!$F2 6031
2 TraesCS2A01G294500 chr2D 374103650 374109869 6219 False 2931 4353 93.073667 188 6042 3 chr2D.!!$F3 5854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
548 952 1.375652 CTCACACAGCCAGAGCCAG 60.376 63.158 0.00 0.00 41.25 4.85 F
1173 1587 0.721718 GCAGCGCTAACTCGTTTCAT 59.278 50.000 10.99 0.00 0.00 2.57 F
1718 2152 0.398318 GAACTGGAACTGGAGGTGCT 59.602 55.000 0.00 0.00 0.00 4.40 F
3059 3519 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19 F
3581 4054 1.134818 TCATACATGCCAGGTCGACAC 60.135 52.381 18.91 6.91 0.00 3.67 F
4884 5373 1.160137 GTTGAGATGTGGTGCTGGAC 58.840 55.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 2131 1.059913 CACCTCCAGTTCCAGTTCCT 58.940 55.000 0.00 0.00 0.00 3.36 R
2115 2551 1.131883 GCTCGCACATCTGCAAAATCT 59.868 47.619 0.00 0.00 44.50 2.40 R
3105 3565 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00 R
5004 5493 1.281419 TCTATGACCGCCCTGGAAAA 58.719 50.000 0.00 0.00 42.00 2.29 R
5082 5593 2.163412 CGGCTGCAGCATTTACCTAAAA 59.837 45.455 37.63 0.00 44.36 1.52 R
6059 8235 0.028902 GACGGACAGCACAAAACACC 59.971 55.000 0.00 0.00 0.00 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.997315 CACCTGACCCGAGGCAGA 60.997 66.667 0.00 0.00 36.46 4.26
27 28 2.947532 CGAGGCAGAGGAGCAACCA 61.948 63.158 2.96 0.00 42.04 3.67
57 58 3.160585 CCACTGTCCCTTGCAGGA 58.839 61.111 0.00 0.00 37.67 3.86
67 68 3.764160 CTTGCAGGAGCGGGGATCC 62.764 68.421 1.92 1.92 46.23 3.36
106 107 2.131067 GCGAGGGAGGAGGAAGGAG 61.131 68.421 0.00 0.00 0.00 3.69
210 212 7.404671 TTTTCTATTCCCCTTATCTGCAAAC 57.595 36.000 0.00 0.00 0.00 2.93
213 215 7.387265 TCTATTCCCCTTATCTGCAAACATA 57.613 36.000 0.00 0.00 0.00 2.29
325 720 1.678101 GAGACAGCCAACAGTTTGCTT 59.322 47.619 9.16 2.10 0.00 3.91
425 823 1.926657 TGGGACAAGGAGGCAAACA 59.073 52.632 0.00 0.00 31.92 2.83
462 860 8.936864 ACTAATTGACATCTTTACAGTAGCAAC 58.063 33.333 0.00 0.00 0.00 4.17
470 868 4.688879 TCTTTACAGTAGCAACGGACAATG 59.311 41.667 0.00 0.00 0.00 2.82
546 950 2.745492 GCTCACACAGCCAGAGCC 60.745 66.667 0.00 0.00 46.82 4.70
547 951 2.745698 CTCACACAGCCAGAGCCA 59.254 61.111 0.00 0.00 41.25 4.75
548 952 1.375652 CTCACACAGCCAGAGCCAG 60.376 63.158 0.00 0.00 41.25 4.85
549 953 2.359602 CACACAGCCAGAGCCAGG 60.360 66.667 0.00 0.00 41.25 4.45
550 954 2.851102 ACACAGCCAGAGCCAGGT 60.851 61.111 0.00 0.00 41.25 4.00
551 955 2.359602 CACAGCCAGAGCCAGGTG 60.360 66.667 0.00 0.00 41.25 4.00
582 986 1.901464 GGAGAAGCCGCAAACCCAA 60.901 57.895 0.00 0.00 0.00 4.12
691 1095 2.087646 GTCCCCAAATCTCAAGTGCTC 58.912 52.381 0.00 0.00 0.00 4.26
711 1115 2.877786 TCGCTGATTCTTTTGTGAAGCA 59.122 40.909 0.00 0.00 39.59 3.91
737 1141 2.766313 CGGCGATATCTTGGGATTTCA 58.234 47.619 0.00 0.00 32.10 2.69
1173 1587 0.721718 GCAGCGCTAACTCGTTTCAT 59.278 50.000 10.99 0.00 0.00 2.57
1233 1647 2.811101 CTCCGAGGCGAGCAGAAT 59.189 61.111 0.00 0.00 0.00 2.40
1341 1755 1.363744 CTGCCAAGATCAAGGTCGTC 58.636 55.000 0.00 0.00 0.00 4.20
1667 2101 6.844388 TGTGGAGGTATGATAATACTGTTCCT 59.156 38.462 14.65 0.00 0.00 3.36
1697 2131 3.089838 CAGGCTGGAATGGGTGGA 58.910 61.111 6.61 0.00 0.00 4.02
1718 2152 0.398318 GAACTGGAACTGGAGGTGCT 59.602 55.000 0.00 0.00 0.00 4.40
1805 2239 1.616628 ATTTGAGGGGAGGAGGCGT 60.617 57.895 0.00 0.00 0.00 5.68
2021 2455 7.119116 ACGTATGCATTTGAAACTCTTATCACA 59.881 33.333 3.54 0.00 0.00 3.58
2027 2461 8.462016 GCATTTGAAACTCTTATCACATAAGGT 58.538 33.333 3.92 0.00 41.94 3.50
2115 2551 3.658705 AGGTTCCTGGGTTGGTTAATGTA 59.341 43.478 0.00 0.00 0.00 2.29
2124 2560 5.540337 TGGGTTGGTTAATGTAGATTTTGCA 59.460 36.000 0.00 0.00 0.00 4.08
2191 2627 2.496899 AGGGACTGCAACAGGTATTG 57.503 50.000 0.00 0.00 37.18 1.90
2207 2643 6.039047 ACAGGTATTGCATCTGAAATAAGCTG 59.961 38.462 11.91 12.79 33.45 4.24
2294 2740 4.892934 TGAATTCTAGTTTGCACCCTGTTT 59.107 37.500 7.05 0.00 0.00 2.83
2303 2749 5.010012 AGTTTGCACCCTGTTTATTGAGAAG 59.990 40.000 0.00 0.00 0.00 2.85
2319 2765 4.644498 TGAGAAGACTTCATTGCATGACA 58.356 39.130 17.34 0.00 39.39 3.58
2390 2836 6.018016 CACAATGTGATGTTGAGTAGTGTTCA 60.018 38.462 7.78 0.00 35.23 3.18
2445 2891 6.678547 AGTGCCCCCAAATTATTATTAGTCA 58.321 36.000 0.00 0.00 0.00 3.41
2522 2975 7.566760 TTATGGAGTACTGCCACAAAATATG 57.433 36.000 12.28 0.00 38.44 1.78
2575 3029 9.877178 ATAGTAACTTGGAGAGAATTAAGTGTG 57.123 33.333 0.00 0.00 33.95 3.82
2577 3031 8.429641 AGTAACTTGGAGAGAATTAAGTGTGAA 58.570 33.333 0.00 0.00 33.95 3.18
2654 3109 3.608662 GCAGGTTTGGCTGCAGCA 61.609 61.111 37.63 22.06 45.11 4.41
2679 3134 8.993121 CAATAACCGTGAATAGAATGCTATCTT 58.007 33.333 0.00 0.00 36.31 2.40
2712 3167 4.026356 ACTTAATTGCTCAGGAACAGCT 57.974 40.909 0.00 0.00 37.79 4.24
2808 3263 3.705604 ACTTGTTTCTCACAAATTGCCG 58.294 40.909 0.00 0.00 45.11 5.69
2811 3266 2.286713 TGTTTCTCACAAATTGCCGTCG 60.287 45.455 0.00 0.00 29.87 5.12
2832 3287 3.246226 CGGATCCAGCGAGATTAAACAAG 59.754 47.826 13.41 0.00 0.00 3.16
3004 3462 2.103941 TGTGATGCCATAGTTATCGCCA 59.896 45.455 0.00 0.00 31.98 5.69
3015 3473 1.139058 GTTATCGCCACTCCCATCACT 59.861 52.381 0.00 0.00 0.00 3.41
3018 3476 2.821366 GCCACTCCCATCACTGCG 60.821 66.667 0.00 0.00 0.00 5.18
3043 3503 5.995897 GCAATTTATATGTACTCCCTCCGTT 59.004 40.000 0.00 0.00 0.00 4.44
3045 3505 5.796424 TTTATATGTACTCCCTCCGTTCC 57.204 43.478 0.00 0.00 0.00 3.62
3046 3506 2.832643 TATGTACTCCCTCCGTTCCA 57.167 50.000 0.00 0.00 0.00 3.53
3049 3509 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
3054 3514 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
3059 3519 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
3062 3522 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3067 3527 4.092821 CCAAATTACTCGTCGCAGAAATGA 59.907 41.667 0.00 0.00 39.69 2.57
3079 3539 6.417930 CGTCGCAGAAATGAATGTATCTAGAA 59.582 38.462 0.00 0.00 39.69 2.10
3080 3540 7.559845 GTCGCAGAAATGAATGTATCTAGAAC 58.440 38.462 0.00 0.00 39.69 3.01
3083 3543 9.249457 CGCAGAAATGAATGTATCTAGAACTAA 57.751 33.333 0.00 0.00 0.00 2.24
3119 3589 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
3123 3593 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
3125 3595 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
3405 3875 5.170748 GTTTTTCACCTTATGGCATCAAGG 58.829 41.667 23.00 23.00 45.73 3.61
3516 3986 8.707449 AGGCACATGATAAAATTAATGGTCAAT 58.293 29.630 0.00 0.00 0.00 2.57
3581 4054 1.134818 TCATACATGCCAGGTCGACAC 60.135 52.381 18.91 6.91 0.00 3.67
3586 4059 1.471829 ATGCCAGGTCGACACTGACA 61.472 55.000 26.08 22.79 40.72 3.58
3910 4389 7.540299 TGTTTGGTGAACTTAGTTTTTGTAGG 58.460 34.615 0.00 0.00 39.08 3.18
3950 4429 8.391106 CACTCTTTTATATGGTTGTCTAGTTGC 58.609 37.037 0.00 0.00 0.00 4.17
4006 4485 7.097834 ACAGAAAAGTTGCTACTAGGATACAC 58.902 38.462 0.00 0.00 33.23 2.90
4103 4582 1.541147 CACCTGGCATTTGTGGTGTAG 59.459 52.381 13.19 0.00 43.41 2.74
4114 4593 2.766313 TGTGGTGTAGCAGCTAGTTTG 58.234 47.619 1.02 0.00 32.61 2.93
4220 4699 7.016153 AGTGATCCCACAAAACAGAGTAATA 57.984 36.000 0.00 0.00 45.54 0.98
4291 4770 5.977725 CGTCCGATTAGATTGTGTTCTACAT 59.022 40.000 0.00 0.00 39.48 2.29
4329 4808 3.386726 GGTTGGCCTAGTTTTGGAAGTTT 59.613 43.478 3.32 0.00 0.00 2.66
4338 4817 6.636850 CCTAGTTTTGGAAGTTTGAAATGACG 59.363 38.462 0.00 0.00 0.00 4.35
4349 4828 5.048504 AGTTTGAAATGACGTGATCAAGCAT 60.049 36.000 8.68 10.01 41.93 3.79
4350 4829 5.375417 TTGAAATGACGTGATCAAGCATT 57.625 34.783 18.19 18.19 41.93 3.56
4351 4830 6.493449 TTGAAATGACGTGATCAAGCATTA 57.507 33.333 21.54 11.39 41.93 1.90
4484 4970 5.658190 CCATGGACTTCAGGGTATCAAATTT 59.342 40.000 5.56 0.00 42.03 1.82
4516 5005 3.026694 AGCCTGCATTCAAATAAGACCC 58.973 45.455 0.00 0.00 0.00 4.46
4522 5011 6.455360 TGCATTCAAATAAGACCCATCTTC 57.545 37.500 0.00 0.00 41.63 2.87
4523 5012 6.189859 TGCATTCAAATAAGACCCATCTTCT 58.810 36.000 0.00 0.00 41.63 2.85
4524 5013 7.345691 TGCATTCAAATAAGACCCATCTTCTA 58.654 34.615 0.00 0.00 41.63 2.10
4614 5103 4.034394 GTGTGATCTATTTCGCTGCATGAA 59.966 41.667 0.00 0.00 0.00 2.57
4681 5170 8.573035 TGTTAACATACAAGTTTGATTTCCCTC 58.427 33.333 3.59 0.00 33.07 4.30
4710 5199 4.429108 GCAACTTGTTCCTGCAAAACTAA 58.571 39.130 11.63 5.34 36.09 2.24
4744 5233 6.697395 TGCTAATATATGCAACATACGAGGT 58.303 36.000 0.00 0.00 36.15 3.85
4788 5277 9.672673 ATTTCCATCTATACAACAGTATATGGC 57.327 33.333 10.49 0.00 35.84 4.40
4789 5278 8.435931 TTCCATCTATACAACAGTATATGGCT 57.564 34.615 10.49 0.00 35.84 4.75
4790 5279 9.541884 TTCCATCTATACAACAGTATATGGCTA 57.458 33.333 10.49 0.00 35.84 3.93
4791 5280 9.715119 TCCATCTATACAACAGTATATGGCTAT 57.285 33.333 10.49 0.00 35.84 2.97
4810 5299 6.170675 GCTATATGCCCATAAGAAACTTCG 57.829 41.667 0.00 0.00 35.15 3.79
4849 5338 5.737063 GCAATTATTATGTTCCTGGCACCAG 60.737 44.000 9.87 9.87 43.26 4.00
4850 5339 1.767759 ATTATGTTCCTGGCACCAGC 58.232 50.000 11.39 0.00 42.35 4.85
4884 5373 1.160137 GTTGAGATGTGGTGCTGGAC 58.840 55.000 0.00 0.00 0.00 4.02
4936 5425 2.828520 CTCACAAGAGCTACTTCCCTCA 59.171 50.000 0.00 0.00 36.61 3.86
4956 5445 5.805486 CCTCAAAAACAATGATGATGCTCTG 59.195 40.000 0.00 0.00 0.00 3.35
5004 5493 1.244019 GCCTGGGTGTCGCTTTCATT 61.244 55.000 0.00 0.00 0.00 2.57
5025 5514 1.507140 TTCCAGGGCGGTCATAGAAT 58.493 50.000 0.00 0.00 35.57 2.40
5056 5545 7.341805 AGATCAGCTTATGTAGTCACCATTTT 58.658 34.615 0.00 0.00 0.00 1.82
5058 5547 6.472016 TCAGCTTATGTAGTCACCATTTTCA 58.528 36.000 0.00 0.00 0.00 2.69
5067 5578 3.263425 AGTCACCATTTTCATACGGAGGT 59.737 43.478 0.00 0.00 0.00 3.85
5082 5593 8.265055 TCATACGGAGGTCTGATTTTCTTATTT 58.735 33.333 0.00 0.00 0.00 1.40
5300 5811 3.551496 TTGGGCAACTGCGGGAGAG 62.551 63.158 2.65 0.00 43.26 3.20
5303 5814 1.817099 GGCAACTGCGGGAGAGATG 60.817 63.158 2.65 0.66 43.26 2.90
5415 5926 0.036732 ACGGCAGGATGAAGCAGAAA 59.963 50.000 0.00 0.00 39.69 2.52
5417 5928 0.455005 GGCAGGATGAAGCAGAAAGC 59.545 55.000 0.00 0.00 39.69 3.51
5419 5930 1.830279 CAGGATGAAGCAGAAAGCCA 58.170 50.000 0.00 0.00 42.02 4.75
5442 5953 3.125698 CCGCAAAGGTAAATACGGTTG 57.874 47.619 0.00 2.27 35.99 3.77
5443 5954 2.511879 CGCAAAGGTAAATACGGTTGC 58.488 47.619 14.82 14.82 40.38 4.17
5468 5979 5.654650 ACAACTACTGGTCTAGATTCTGAGG 59.345 44.000 0.00 0.00 0.00 3.86
5474 5985 4.227197 TGGTCTAGATTCTGAGGGGAATC 58.773 47.826 0.00 8.59 46.94 2.52
5571 6082 1.028868 GTGGCAGCAAGGTGGAGATC 61.029 60.000 0.00 0.00 0.00 2.75
5574 6085 1.225704 CAGCAAGGTGGAGATCCCC 59.774 63.158 0.00 0.00 34.29 4.81
5643 6154 0.178861 TCTCCAGGGCTCCCTTTCTT 60.179 55.000 4.34 0.00 45.70 2.52
5648 6159 3.051341 TCCAGGGCTCCCTTTCTTAGATA 60.051 47.826 4.34 0.00 45.70 1.98
5854 6366 2.055689 CTGCCTTCCTGGTGTGTCCA 62.056 60.000 0.00 0.00 45.01 4.02
5861 6373 3.027170 CTGGTGTGTCCAATCGCGC 62.027 63.158 0.00 0.00 46.59 6.86
5866 6378 4.435436 TGTCCAATCGCGCGCTCT 62.435 61.111 30.48 13.39 0.00 4.09
5881 6412 1.134280 CGCTCTTCTTCATGTCCCCAT 60.134 52.381 0.00 0.00 0.00 4.00
5898 8073 4.047265 TCCCCATATGCCTACTTATCTCCT 59.953 45.833 0.00 0.00 0.00 3.69
5905 8080 3.039011 GCCTACTTATCTCCTTGTCCCA 58.961 50.000 0.00 0.00 0.00 4.37
5919 8094 4.275936 CCTTGTCCCATTCATCGGTTATTC 59.724 45.833 0.00 0.00 0.00 1.75
5996 8172 3.071602 GGATGTTAGGGCATCTCTAGCAA 59.928 47.826 6.11 0.00 43.41 3.91
5999 8175 5.116084 TGTTAGGGCATCTCTAGCAAATT 57.884 39.130 0.00 0.00 0.00 1.82
6002 8178 4.516652 AGGGCATCTCTAGCAAATTTCT 57.483 40.909 0.00 0.00 0.00 2.52
6032 8208 4.037923 TCAAATTGGAGGAGCAAAAGTGAC 59.962 41.667 0.00 0.00 0.00 3.67
6038 8214 5.136828 TGGAGGAGCAAAAGTGACATTTTA 58.863 37.500 0.00 0.00 31.29 1.52
6042 8218 5.827797 AGGAGCAAAAGTGACATTTTAGTGA 59.172 36.000 0.00 0.00 31.29 3.41
6043 8219 6.321181 AGGAGCAAAAGTGACATTTTAGTGAA 59.679 34.615 0.00 0.00 31.29 3.18
6044 8220 6.638468 GGAGCAAAAGTGACATTTTAGTGAAG 59.362 38.462 0.00 0.00 31.29 3.02
6045 8221 7.100458 AGCAAAAGTGACATTTTAGTGAAGT 57.900 32.000 0.00 0.00 31.29 3.01
6046 8222 7.547227 AGCAAAAGTGACATTTTAGTGAAGTT 58.453 30.769 0.00 0.00 31.29 2.66
6047 8223 8.034804 AGCAAAAGTGACATTTTAGTGAAGTTT 58.965 29.630 0.00 0.00 31.29 2.66
6048 8224 8.655970 GCAAAAGTGACATTTTAGTGAAGTTTT 58.344 29.630 0.00 0.00 31.29 2.43
6049 8225 9.956797 CAAAAGTGACATTTTAGTGAAGTTTTG 57.043 29.630 0.00 0.00 35.70 2.44
6050 8226 8.702163 AAAGTGACATTTTAGTGAAGTTTTGG 57.298 30.769 0.00 0.00 0.00 3.28
6051 8227 6.805713 AGTGACATTTTAGTGAAGTTTTGGG 58.194 36.000 0.00 0.00 0.00 4.12
6052 8228 6.379988 AGTGACATTTTAGTGAAGTTTTGGGT 59.620 34.615 0.00 0.00 0.00 4.51
6053 8229 7.039270 GTGACATTTTAGTGAAGTTTTGGGTT 58.961 34.615 0.00 0.00 0.00 4.11
6054 8230 7.547722 GTGACATTTTAGTGAAGTTTTGGGTTT 59.452 33.333 0.00 0.00 0.00 3.27
6055 8231 8.750298 TGACATTTTAGTGAAGTTTTGGGTTTA 58.250 29.630 0.00 0.00 0.00 2.01
6056 8232 9.244799 GACATTTTAGTGAAGTTTTGGGTTTAG 57.755 33.333 0.00 0.00 0.00 1.85
6057 8233 8.201464 ACATTTTAGTGAAGTTTTGGGTTTAGG 58.799 33.333 0.00 0.00 0.00 2.69
6058 8234 6.718522 TTTAGTGAAGTTTTGGGTTTAGGG 57.281 37.500 0.00 0.00 0.00 3.53
6059 8235 3.572642 AGTGAAGTTTTGGGTTTAGGGG 58.427 45.455 0.00 0.00 0.00 4.79
6060 8236 2.631062 GTGAAGTTTTGGGTTTAGGGGG 59.369 50.000 0.00 0.00 0.00 5.40
6061 8237 2.247897 TGAAGTTTTGGGTTTAGGGGGT 59.752 45.455 0.00 0.00 0.00 4.95
6062 8238 2.391926 AGTTTTGGGTTTAGGGGGTG 57.608 50.000 0.00 0.00 0.00 4.61
6063 8239 1.576757 AGTTTTGGGTTTAGGGGGTGT 59.423 47.619 0.00 0.00 0.00 4.16
6064 8240 2.022820 AGTTTTGGGTTTAGGGGGTGTT 60.023 45.455 0.00 0.00 0.00 3.32
6065 8241 2.773087 GTTTTGGGTTTAGGGGGTGTTT 59.227 45.455 0.00 0.00 0.00 2.83
6066 8242 2.871007 TTGGGTTTAGGGGGTGTTTT 57.129 45.000 0.00 0.00 0.00 2.43
6067 8243 2.089600 TGGGTTTAGGGGGTGTTTTG 57.910 50.000 0.00 0.00 0.00 2.44
6068 8244 1.291335 TGGGTTTAGGGGGTGTTTTGT 59.709 47.619 0.00 0.00 0.00 2.83
6069 8245 1.689813 GGGTTTAGGGGGTGTTTTGTG 59.310 52.381 0.00 0.00 0.00 3.33
6070 8246 1.069513 GGTTTAGGGGGTGTTTTGTGC 59.930 52.381 0.00 0.00 0.00 4.57
6071 8247 2.036387 GTTTAGGGGGTGTTTTGTGCT 58.964 47.619 0.00 0.00 0.00 4.40
6072 8248 1.698506 TTAGGGGGTGTTTTGTGCTG 58.301 50.000 0.00 0.00 0.00 4.41
6073 8249 0.553819 TAGGGGGTGTTTTGTGCTGT 59.446 50.000 0.00 0.00 0.00 4.40
6074 8250 0.755327 AGGGGGTGTTTTGTGCTGTC 60.755 55.000 0.00 0.00 0.00 3.51
6075 8251 1.739667 GGGGTGTTTTGTGCTGTCC 59.260 57.895 0.00 0.00 0.00 4.02
6076 8252 1.358759 GGGTGTTTTGTGCTGTCCG 59.641 57.895 0.00 0.00 0.00 4.79
6077 8253 1.381165 GGGTGTTTTGTGCTGTCCGT 61.381 55.000 0.00 0.00 0.00 4.69
6078 8254 0.028902 GGTGTTTTGTGCTGTCCGTC 59.971 55.000 0.00 0.00 0.00 4.79
6079 8255 0.315869 GTGTTTTGTGCTGTCCGTCG 60.316 55.000 0.00 0.00 0.00 5.12
6080 8256 1.278637 GTTTTGTGCTGTCCGTCGG 59.721 57.895 4.39 4.39 0.00 4.79
6081 8257 1.153329 TTTTGTGCTGTCCGTCGGT 60.153 52.632 11.88 0.00 0.00 4.69
6082 8258 0.745128 TTTTGTGCTGTCCGTCGGTT 60.745 50.000 11.88 0.00 0.00 4.44
6083 8259 1.433053 TTTGTGCTGTCCGTCGGTTG 61.433 55.000 11.88 3.98 0.00 3.77
6084 8260 2.028484 GTGCTGTCCGTCGGTTGA 59.972 61.111 11.88 0.00 0.00 3.18
6085 8261 2.028484 TGCTGTCCGTCGGTTGAC 59.972 61.111 11.88 2.65 41.91 3.18
6094 8270 1.129209 GTCGGTTGACGCGTAAAGC 59.871 57.895 25.34 25.34 43.86 3.51
6095 8271 2.023223 TCGGTTGACGCGTAAAGCC 61.023 57.895 28.04 21.32 44.76 4.35
6096 8272 2.472934 GGTTGACGCGTAAAGCCG 59.527 61.111 24.92 0.00 44.76 5.52
6105 8281 2.551644 CGTAAAGCCGCCCTTTTCT 58.448 52.632 4.90 0.00 40.85 2.52
6106 8282 0.879090 CGTAAAGCCGCCCTTTTCTT 59.121 50.000 4.90 0.00 40.85 2.52
6107 8283 1.268625 CGTAAAGCCGCCCTTTTCTTT 59.731 47.619 4.90 0.00 40.85 2.52
6108 8284 2.287970 CGTAAAGCCGCCCTTTTCTTTT 60.288 45.455 4.90 0.00 40.85 2.27
6109 8285 3.724374 GTAAAGCCGCCCTTTTCTTTTT 58.276 40.909 4.90 0.00 40.85 1.94
6125 8301 1.670791 TTTTTGAACTTCGGCGACCT 58.329 45.000 10.16 0.00 0.00 3.85
6126 8302 1.670791 TTTTGAACTTCGGCGACCTT 58.329 45.000 10.16 3.01 0.00 3.50
6127 8303 1.670791 TTTGAACTTCGGCGACCTTT 58.329 45.000 10.16 2.25 0.00 3.11
6128 8304 2.529780 TTGAACTTCGGCGACCTTTA 57.470 45.000 10.16 0.00 0.00 1.85
6129 8305 2.754946 TGAACTTCGGCGACCTTTAT 57.245 45.000 10.16 0.00 0.00 1.40
6130 8306 3.048337 TGAACTTCGGCGACCTTTATT 57.952 42.857 10.16 0.00 0.00 1.40
6131 8307 4.191033 TGAACTTCGGCGACCTTTATTA 57.809 40.909 10.16 0.00 0.00 0.98
6132 8308 4.567971 TGAACTTCGGCGACCTTTATTAA 58.432 39.130 10.16 0.00 0.00 1.40
6133 8309 4.996122 TGAACTTCGGCGACCTTTATTAAA 59.004 37.500 10.16 0.00 0.00 1.52
6134 8310 5.644636 TGAACTTCGGCGACCTTTATTAAAT 59.355 36.000 10.16 0.00 0.00 1.40
6135 8311 6.817641 TGAACTTCGGCGACCTTTATTAAATA 59.182 34.615 10.16 0.00 0.00 1.40
6136 8312 7.333921 TGAACTTCGGCGACCTTTATTAAATAA 59.666 33.333 10.16 0.00 0.00 1.40
6137 8313 7.008440 ACTTCGGCGACCTTTATTAAATAAC 57.992 36.000 10.16 0.00 0.00 1.89
6138 8314 6.594937 ACTTCGGCGACCTTTATTAAATAACA 59.405 34.615 10.16 0.00 0.00 2.41
6139 8315 6.981762 TCGGCGACCTTTATTAAATAACAA 57.018 33.333 4.99 0.00 0.00 2.83
6140 8316 6.774084 TCGGCGACCTTTATTAAATAACAAC 58.226 36.000 4.99 0.00 0.00 3.32
6141 8317 5.967088 CGGCGACCTTTATTAAATAACAACC 59.033 40.000 0.00 0.00 0.00 3.77
6142 8318 6.403418 CGGCGACCTTTATTAAATAACAACCA 60.403 38.462 0.00 0.00 0.00 3.67
6143 8319 7.485810 GGCGACCTTTATTAAATAACAACCAT 58.514 34.615 0.00 0.00 0.00 3.55
6144 8320 7.434013 GGCGACCTTTATTAAATAACAACCATG 59.566 37.037 0.00 0.00 0.00 3.66
6145 8321 7.971722 GCGACCTTTATTAAATAACAACCATGT 59.028 33.333 0.00 0.00 43.14 3.21
6146 8322 9.498307 CGACCTTTATTAAATAACAACCATGTC 57.502 33.333 0.00 0.00 39.40 3.06
6156 8332 8.911918 AAATAACAACCATGTCTGTTACTACA 57.088 30.769 15.37 0.89 39.99 2.74
6157 8333 8.911918 AATAACAACCATGTCTGTTACTACAA 57.088 30.769 15.37 0.33 39.99 2.41
6158 8334 6.861065 AACAACCATGTCTGTTACTACAAG 57.139 37.500 7.65 0.00 39.40 3.16
6159 8335 6.169557 ACAACCATGTCTGTTACTACAAGA 57.830 37.500 0.00 0.00 33.41 3.02
6160 8336 6.223852 ACAACCATGTCTGTTACTACAAGAG 58.776 40.000 0.00 0.00 33.41 2.85
6161 8337 6.041637 ACAACCATGTCTGTTACTACAAGAGA 59.958 38.462 0.00 0.00 33.41 3.10
6162 8338 6.274157 ACCATGTCTGTTACTACAAGAGAG 57.726 41.667 0.00 0.00 32.92 3.20
6163 8339 5.186021 ACCATGTCTGTTACTACAAGAGAGG 59.814 44.000 0.00 0.00 32.92 3.69
6164 8340 5.419155 CCATGTCTGTTACTACAAGAGAGGA 59.581 44.000 0.00 0.00 32.92 3.71
6165 8341 6.405286 CCATGTCTGTTACTACAAGAGAGGAG 60.405 46.154 0.00 0.00 32.92 3.69
6166 8342 5.010933 TGTCTGTTACTACAAGAGAGGAGG 58.989 45.833 0.00 0.00 32.92 4.30
6167 8343 5.011586 GTCTGTTACTACAAGAGAGGAGGT 58.988 45.833 0.00 0.00 32.92 3.85
6168 8344 5.477637 GTCTGTTACTACAAGAGAGGAGGTT 59.522 44.000 0.00 0.00 32.92 3.50
6169 8345 6.658391 GTCTGTTACTACAAGAGAGGAGGTTA 59.342 42.308 0.00 0.00 32.92 2.85
6170 8346 7.176340 GTCTGTTACTACAAGAGAGGAGGTTAA 59.824 40.741 0.00 0.00 32.92 2.01
6171 8347 7.727186 TCTGTTACTACAAGAGAGGAGGTTAAA 59.273 37.037 0.00 0.00 32.92 1.52
6172 8348 8.253867 TGTTACTACAAGAGAGGAGGTTAAAA 57.746 34.615 0.00 0.00 0.00 1.52
6173 8349 8.707449 TGTTACTACAAGAGAGGAGGTTAAAAA 58.293 33.333 0.00 0.00 0.00 1.94
6174 8350 9.205719 GTTACTACAAGAGAGGAGGTTAAAAAG 57.794 37.037 0.00 0.00 0.00 2.27
6175 8351 7.376335 ACTACAAGAGAGGAGGTTAAAAAGT 57.624 36.000 0.00 0.00 0.00 2.66
6176 8352 8.488308 ACTACAAGAGAGGAGGTTAAAAAGTA 57.512 34.615 0.00 0.00 0.00 2.24
6177 8353 8.586744 ACTACAAGAGAGGAGGTTAAAAAGTAG 58.413 37.037 0.00 0.00 0.00 2.57
6178 8354 6.770542 ACAAGAGAGGAGGTTAAAAAGTAGG 58.229 40.000 0.00 0.00 0.00 3.18
6179 8355 6.174049 CAAGAGAGGAGGTTAAAAAGTAGGG 58.826 44.000 0.00 0.00 0.00 3.53
6180 8356 5.662597 AGAGAGGAGGTTAAAAAGTAGGGA 58.337 41.667 0.00 0.00 0.00 4.20
6181 8357 5.722441 AGAGAGGAGGTTAAAAAGTAGGGAG 59.278 44.000 0.00 0.00 0.00 4.30
6182 8358 5.413277 AGAGGAGGTTAAAAAGTAGGGAGT 58.587 41.667 0.00 0.00 0.00 3.85
6183 8359 5.248705 AGAGGAGGTTAAAAAGTAGGGAGTG 59.751 44.000 0.00 0.00 0.00 3.51
6184 8360 4.008330 GGAGGTTAAAAAGTAGGGAGTGC 58.992 47.826 0.00 0.00 0.00 4.40
6185 8361 4.263374 GGAGGTTAAAAAGTAGGGAGTGCT 60.263 45.833 0.00 0.00 0.00 4.40
6186 8362 4.652822 AGGTTAAAAAGTAGGGAGTGCTG 58.347 43.478 0.00 0.00 0.00 4.41
6187 8363 3.190744 GGTTAAAAAGTAGGGAGTGCTGC 59.809 47.826 0.00 0.00 0.00 5.25
6188 8364 2.959465 AAAAAGTAGGGAGTGCTGCT 57.041 45.000 0.00 0.00 0.00 4.24
6189 8365 2.481289 AAAAGTAGGGAGTGCTGCTC 57.519 50.000 0.00 0.00 43.39 4.26
6190 8366 1.352083 AAAGTAGGGAGTGCTGCTCA 58.648 50.000 0.00 0.00 45.88 4.26
6191 8367 0.901124 AAGTAGGGAGTGCTGCTCAG 59.099 55.000 0.00 0.00 45.88 3.35
6192 8368 0.252012 AGTAGGGAGTGCTGCTCAGT 60.252 55.000 0.00 0.00 45.88 3.41
6193 8369 1.006043 AGTAGGGAGTGCTGCTCAGTA 59.994 52.381 0.00 0.00 45.88 2.74
6194 8370 1.135333 GTAGGGAGTGCTGCTCAGTAC 59.865 57.143 9.61 9.61 45.88 2.73
6195 8371 1.153745 GGGAGTGCTGCTCAGTACG 60.154 63.158 11.42 0.00 46.57 3.67
6196 8372 1.587054 GGAGTGCTGCTCAGTACGT 59.413 57.895 11.42 0.00 46.57 3.57
6197 8373 0.038159 GGAGTGCTGCTCAGTACGTT 60.038 55.000 11.42 0.00 46.57 3.99
6198 8374 1.605712 GGAGTGCTGCTCAGTACGTTT 60.606 52.381 11.42 0.00 46.57 3.60
6199 8375 2.135933 GAGTGCTGCTCAGTACGTTTT 58.864 47.619 11.42 0.00 46.57 2.43
6200 8376 2.135933 AGTGCTGCTCAGTACGTTTTC 58.864 47.619 11.42 0.00 46.57 2.29
6201 8377 1.194772 GTGCTGCTCAGTACGTTTTCC 59.805 52.381 0.00 0.00 34.54 3.13
6202 8378 0.796927 GCTGCTCAGTACGTTTTCCC 59.203 55.000 0.00 0.00 0.00 3.97
6203 8379 1.608283 GCTGCTCAGTACGTTTTCCCT 60.608 52.381 0.00 0.00 0.00 4.20
6204 8380 2.338500 CTGCTCAGTACGTTTTCCCTC 58.662 52.381 0.00 0.00 0.00 4.30
6205 8381 1.968493 TGCTCAGTACGTTTTCCCTCT 59.032 47.619 0.00 0.00 0.00 3.69
6206 8382 3.159472 TGCTCAGTACGTTTTCCCTCTA 58.841 45.455 0.00 0.00 0.00 2.43
6207 8383 3.767673 TGCTCAGTACGTTTTCCCTCTAT 59.232 43.478 0.00 0.00 0.00 1.98
6208 8384 4.951715 TGCTCAGTACGTTTTCCCTCTATA 59.048 41.667 0.00 0.00 0.00 1.31
6209 8385 5.419788 TGCTCAGTACGTTTTCCCTCTATAA 59.580 40.000 0.00 0.00 0.00 0.98
6210 8386 5.978322 GCTCAGTACGTTTTCCCTCTATAAG 59.022 44.000 0.00 0.00 0.00 1.73
6211 8387 6.183360 GCTCAGTACGTTTTCCCTCTATAAGA 60.183 42.308 0.00 0.00 0.00 2.10
6212 8388 7.330900 TCAGTACGTTTTCCCTCTATAAGAG 57.669 40.000 0.00 0.00 41.96 2.85
6213 8389 5.978322 CAGTACGTTTTCCCTCTATAAGAGC 59.022 44.000 0.00 0.00 40.98 4.09
6214 8390 5.655532 AGTACGTTTTCCCTCTATAAGAGCA 59.344 40.000 0.00 0.00 40.98 4.26
6215 8391 5.416271 ACGTTTTCCCTCTATAAGAGCAA 57.584 39.130 0.00 0.00 40.98 3.91
6216 8392 5.176592 ACGTTTTCCCTCTATAAGAGCAAC 58.823 41.667 0.00 0.00 40.98 4.17
6217 8393 5.046520 ACGTTTTCCCTCTATAAGAGCAACT 60.047 40.000 0.00 0.00 40.98 3.16
6218 8394 5.875359 CGTTTTCCCTCTATAAGAGCAACTT 59.125 40.000 0.00 2.10 40.98 2.66
6219 8395 6.371825 CGTTTTCCCTCTATAAGAGCAACTTT 59.628 38.462 0.00 0.00 40.98 2.66
6220 8396 7.548075 CGTTTTCCCTCTATAAGAGCAACTTTA 59.452 37.037 0.00 0.00 40.98 1.85
6221 8397 9.227777 GTTTTCCCTCTATAAGAGCAACTTTAA 57.772 33.333 0.00 0.00 40.98 1.52
6222 8398 9.975218 TTTTCCCTCTATAAGAGCAACTTTAAT 57.025 29.630 0.00 0.00 40.98 1.40
6223 8399 8.964476 TTCCCTCTATAAGAGCAACTTTAATG 57.036 34.615 0.00 0.00 40.98 1.90
6224 8400 7.509546 TCCCTCTATAAGAGCAACTTTAATGG 58.490 38.462 0.00 0.00 40.98 3.16
6225 8401 6.712547 CCCTCTATAAGAGCAACTTTAATGGG 59.287 42.308 0.00 0.00 40.98 4.00
6226 8402 6.712547 CCTCTATAAGAGCAACTTTAATGGGG 59.287 42.308 0.00 0.00 40.98 4.96
6227 8403 6.062095 TCTATAAGAGCAACTTTAATGGGGC 58.938 40.000 1.81 0.00 39.72 5.80
6228 8404 1.463674 AGAGCAACTTTAATGGGGCG 58.536 50.000 0.00 0.00 0.00 6.13
6229 8405 1.004277 AGAGCAACTTTAATGGGGCGA 59.996 47.619 0.00 0.00 0.00 5.54
6230 8406 1.132453 GAGCAACTTTAATGGGGCGAC 59.868 52.381 0.00 0.00 0.00 5.19
6242 8418 3.192922 GGCGACCCATTTCGTCCG 61.193 66.667 0.00 0.00 41.26 4.79
6243 8419 3.861263 GCGACCCATTTCGTCCGC 61.861 66.667 0.00 0.00 41.26 5.54
6244 8420 3.192922 CGACCCATTTCGTCCGCC 61.193 66.667 0.00 0.00 34.16 6.13
6245 8421 2.822701 GACCCATTTCGTCCGCCC 60.823 66.667 0.00 0.00 0.00 6.13
6246 8422 4.770874 ACCCATTTCGTCCGCCCG 62.771 66.667 0.00 0.00 0.00 6.13
6265 8441 4.974989 GTCCGTTTGGGTCGGCGT 62.975 66.667 6.85 0.00 46.49 5.68
6266 8442 4.973055 TCCGTTTGGGTCGGCGTG 62.973 66.667 6.85 0.00 46.49 5.34
6268 8444 4.973055 CGTTTGGGTCGGCGTGGA 62.973 66.667 6.85 0.00 0.00 4.02
6269 8445 2.592287 GTTTGGGTCGGCGTGGAA 60.592 61.111 6.85 0.00 0.00 3.53
6270 8446 2.188161 GTTTGGGTCGGCGTGGAAA 61.188 57.895 6.85 0.00 0.00 3.13
6271 8447 1.453379 TTTGGGTCGGCGTGGAAAA 60.453 52.632 6.85 1.63 0.00 2.29
6272 8448 1.035932 TTTGGGTCGGCGTGGAAAAA 61.036 50.000 6.85 0.14 0.00 1.94
6288 8464 0.033366 AAAAAGTGACGGCCCAATGC 59.967 50.000 0.00 0.00 40.16 3.56
6289 8465 2.141122 AAAAGTGACGGCCCAATGCG 62.141 55.000 0.00 0.00 42.61 4.73
6296 8472 4.225703 GGCCCAATGCGCCAATCC 62.226 66.667 4.18 0.00 46.27 3.01
6297 8473 3.459965 GCCCAATGCGCCAATCCA 61.460 61.111 4.18 0.00 0.00 3.41
6298 8474 3.016541 GCCCAATGCGCCAATCCAA 62.017 57.895 4.18 0.00 0.00 3.53
6299 8475 1.595882 CCCAATGCGCCAATCCAAA 59.404 52.632 4.18 0.00 0.00 3.28
6300 8476 0.740516 CCCAATGCGCCAATCCAAAC 60.741 55.000 4.18 0.00 0.00 2.93
6301 8477 1.077645 CCAATGCGCCAATCCAAACG 61.078 55.000 4.18 0.00 0.00 3.60
6302 8478 1.077645 CAATGCGCCAATCCAAACGG 61.078 55.000 4.18 0.00 0.00 4.44
6303 8479 1.247419 AATGCGCCAATCCAAACGGA 61.247 50.000 4.18 0.00 36.85 4.69
6304 8480 1.933115 ATGCGCCAATCCAAACGGAC 61.933 55.000 4.18 0.00 34.62 4.79
6305 8481 2.478746 CGCCAATCCAAACGGACG 59.521 61.111 0.00 0.00 34.62 4.79
6306 8482 2.178273 GCCAATCCAAACGGACGC 59.822 61.111 0.00 0.00 34.62 5.19
6307 8483 2.478746 CCAATCCAAACGGACGCG 59.521 61.111 3.53 3.53 34.62 6.01
6308 8484 2.202298 CAATCCAAACGGACGCGC 60.202 61.111 5.73 0.00 34.62 6.86
6309 8485 3.784412 AATCCAAACGGACGCGCG 61.784 61.111 30.96 30.96 34.62 6.86
6312 8488 4.712873 CCAAACGGACGCGCGTTC 62.713 66.667 38.03 34.49 0.00 3.95
6323 8499 2.844146 CGCGTTCGCTTTTCGTCT 59.156 55.556 14.92 0.00 39.67 4.18
6324 8500 1.505057 CGCGTTCGCTTTTCGTCTG 60.505 57.895 14.92 0.00 39.67 3.51
6325 8501 1.788586 GCGTTCGCTTTTCGTCTGC 60.789 57.895 9.99 0.00 39.67 4.26
6329 8505 4.445545 CGCTTTTCGTCTGCGGGC 62.446 66.667 0.00 0.00 45.07 6.13
6330 8506 4.445545 GCTTTTCGTCTGCGGGCG 62.446 66.667 14.78 14.78 38.89 6.13
6331 8507 2.736995 CTTTTCGTCTGCGGGCGA 60.737 61.111 20.19 20.19 38.89 5.54
6332 8508 3.011760 CTTTTCGTCTGCGGGCGAC 62.012 63.158 24.12 3.37 36.82 5.19
6344 8520 2.044946 GGCGACCCATTTCAGGCT 60.045 61.111 0.00 0.00 0.00 4.58
6345 8521 2.115291 GGCGACCCATTTCAGGCTC 61.115 63.158 0.00 0.00 0.00 4.70
6346 8522 1.377202 GCGACCCATTTCAGGCTCA 60.377 57.895 0.00 0.00 0.00 4.26
6347 8523 0.960364 GCGACCCATTTCAGGCTCAA 60.960 55.000 0.00 0.00 0.00 3.02
6348 8524 1.755179 CGACCCATTTCAGGCTCAAT 58.245 50.000 0.00 0.00 0.00 2.57
6349 8525 2.094675 CGACCCATTTCAGGCTCAATT 58.905 47.619 0.00 0.00 0.00 2.32
6350 8526 2.493278 CGACCCATTTCAGGCTCAATTT 59.507 45.455 0.00 0.00 0.00 1.82
6351 8527 3.056607 CGACCCATTTCAGGCTCAATTTT 60.057 43.478 0.00 0.00 0.00 1.82
6352 8528 4.248058 GACCCATTTCAGGCTCAATTTTG 58.752 43.478 0.00 0.00 0.00 2.44
6353 8529 3.903090 ACCCATTTCAGGCTCAATTTTGA 59.097 39.130 0.00 0.00 35.57 2.69
6366 8542 5.534207 TCAATTTTGAGCCTGATTTGTGT 57.466 34.783 0.00 0.00 32.50 3.72
6367 8543 5.531634 TCAATTTTGAGCCTGATTTGTGTC 58.468 37.500 0.00 0.00 32.50 3.67
6368 8544 3.624326 TTTTGAGCCTGATTTGTGTCG 57.376 42.857 0.00 0.00 0.00 4.35
6369 8545 1.522668 TTGAGCCTGATTTGTGTCGG 58.477 50.000 0.00 0.00 0.00 4.79
6370 8546 0.955428 TGAGCCTGATTTGTGTCGGC 60.955 55.000 0.00 0.00 37.76 5.54
6371 8547 1.970917 GAGCCTGATTTGTGTCGGCG 61.971 60.000 0.00 0.00 40.36 6.46
6372 8548 2.480555 CCTGATTTGTGTCGGCGC 59.519 61.111 0.00 0.00 0.00 6.53
6373 8549 2.096406 CTGATTTGTGTCGGCGCG 59.904 61.111 0.00 0.00 0.00 6.86
6374 8550 3.367051 CTGATTTGTGTCGGCGCGG 62.367 63.158 8.83 8.94 0.00 6.46
6375 8551 3.115892 GATTTGTGTCGGCGCGGA 61.116 61.111 14.27 14.27 0.00 5.54
6376 8552 3.362851 GATTTGTGTCGGCGCGGAC 62.363 63.158 33.62 33.62 37.45 4.79
6377 8553 4.893601 TTTGTGTCGGCGCGGACA 62.894 61.111 37.41 37.41 44.25 4.02
6381 8557 4.794439 TGTCGGCGCGGACATGAG 62.794 66.667 37.41 7.43 41.76 2.90
6382 8558 4.492160 GTCGGCGCGGACATGAGA 62.492 66.667 34.74 4.76 36.91 3.27
6383 8559 4.193334 TCGGCGCGGACATGAGAG 62.193 66.667 14.27 0.00 0.00 3.20
6385 8561 4.899239 GGCGCGGACATGAGAGGG 62.899 72.222 8.83 0.00 0.00 4.30
6386 8562 3.838271 GCGCGGACATGAGAGGGA 61.838 66.667 8.83 0.00 0.00 4.20
6387 8563 2.105128 CGCGGACATGAGAGGGAC 59.895 66.667 0.00 0.00 0.00 4.46
6388 8564 2.105128 GCGGACATGAGAGGGACG 59.895 66.667 0.00 0.00 0.00 4.79
6389 8565 2.105128 CGGACATGAGAGGGACGC 59.895 66.667 0.00 0.00 0.00 5.19
6390 8566 2.105128 GGACATGAGAGGGACGCG 59.895 66.667 3.53 3.53 0.00 6.01
6391 8567 2.583593 GACATGAGAGGGACGCGC 60.584 66.667 5.73 0.00 0.00 6.86
6392 8568 4.498520 ACATGAGAGGGACGCGCG 62.499 66.667 30.96 30.96 0.00 6.86
6408 8584 4.615834 CGCGCGCCTACTCTCTCC 62.616 72.222 27.72 0.00 0.00 3.71
6409 8585 4.615834 GCGCGCCTACTCTCTCCG 62.616 72.222 23.24 0.00 0.00 4.63
6410 8586 3.955101 CGCGCCTACTCTCTCCGG 61.955 72.222 0.00 0.00 0.00 5.14
6411 8587 3.597728 GCGCCTACTCTCTCCGGG 61.598 72.222 0.00 0.00 0.00 5.73
6412 8588 3.597728 CGCCTACTCTCTCCGGGC 61.598 72.222 0.00 0.00 39.43 6.13
6413 8589 3.228017 GCCTACTCTCTCCGGGCC 61.228 72.222 0.00 0.00 37.12 5.80
6414 8590 2.522193 CCTACTCTCTCCGGGCCC 60.522 72.222 13.57 13.57 0.00 5.80
6415 8591 2.907917 CTACTCTCTCCGGGCCCG 60.908 72.222 37.99 37.99 39.44 6.13
6441 8617 4.870069 TGGCAGCCACCATCATTT 57.130 50.000 11.22 0.00 33.75 2.32
6442 8618 2.582272 TGGCAGCCACCATCATTTC 58.418 52.632 11.22 0.00 33.75 2.17
6443 8619 0.971959 TGGCAGCCACCATCATTTCC 60.972 55.000 11.22 0.00 33.75 3.13
6444 8620 1.679559 GGCAGCCACCATCATTTCCC 61.680 60.000 6.55 0.00 0.00 3.97
6445 8621 1.679559 GCAGCCACCATCATTTCCCC 61.680 60.000 0.00 0.00 0.00 4.81
6446 8622 1.044790 CAGCCACCATCATTTCCCCC 61.045 60.000 0.00 0.00 0.00 5.40
6447 8623 1.224003 AGCCACCATCATTTCCCCCT 61.224 55.000 0.00 0.00 0.00 4.79
6448 8624 0.555769 GCCACCATCATTTCCCCCTA 59.444 55.000 0.00 0.00 0.00 3.53
6449 8625 1.147817 GCCACCATCATTTCCCCCTAT 59.852 52.381 0.00 0.00 0.00 2.57
6450 8626 2.426268 GCCACCATCATTTCCCCCTATT 60.426 50.000 0.00 0.00 0.00 1.73
6451 8627 3.927476 CCACCATCATTTCCCCCTATTT 58.073 45.455 0.00 0.00 0.00 1.40
6452 8628 4.297768 CCACCATCATTTCCCCCTATTTT 58.702 43.478 0.00 0.00 0.00 1.82
6453 8629 4.344968 CCACCATCATTTCCCCCTATTTTC 59.655 45.833 0.00 0.00 0.00 2.29
6454 8630 4.344968 CACCATCATTTCCCCCTATTTTCC 59.655 45.833 0.00 0.00 0.00 3.13
6455 8631 3.903714 CCATCATTTCCCCCTATTTTCCC 59.096 47.826 0.00 0.00 0.00 3.97
6456 8632 3.699025 TCATTTCCCCCTATTTTCCCC 57.301 47.619 0.00 0.00 0.00 4.81
6457 8633 2.936576 TCATTTCCCCCTATTTTCCCCA 59.063 45.455 0.00 0.00 0.00 4.96
6458 8634 3.341280 TCATTTCCCCCTATTTTCCCCAA 59.659 43.478 0.00 0.00 0.00 4.12
6459 8635 3.945283 TTTCCCCCTATTTTCCCCAAA 57.055 42.857 0.00 0.00 0.00 3.28
6460 8636 3.945283 TTCCCCCTATTTTCCCCAAAA 57.055 42.857 0.00 0.00 35.92 2.44
6461 8637 3.945283 TCCCCCTATTTTCCCCAAAAA 57.055 42.857 0.00 0.00 40.98 1.94
6462 8638 3.522759 TCCCCCTATTTTCCCCAAAAAC 58.477 45.455 0.00 0.00 39.59 2.43
6463 8639 3.116317 TCCCCCTATTTTCCCCAAAAACA 60.116 43.478 0.00 0.00 39.59 2.83
6464 8640 3.008594 CCCCCTATTTTCCCCAAAAACAC 59.991 47.826 0.00 0.00 39.59 3.32
6465 8641 3.907474 CCCCTATTTTCCCCAAAAACACT 59.093 43.478 0.00 0.00 39.59 3.55
6466 8642 4.020573 CCCCTATTTTCCCCAAAAACACTC 60.021 45.833 0.00 0.00 39.59 3.51
6467 8643 4.020573 CCCTATTTTCCCCAAAAACACTCC 60.021 45.833 0.00 0.00 39.59 3.85
6468 8644 4.020573 CCTATTTTCCCCAAAAACACTCCC 60.021 45.833 0.00 0.00 39.59 4.30
6469 8645 1.404843 TTTCCCCAAAAACACTCCCG 58.595 50.000 0.00 0.00 0.00 5.14
6470 8646 1.110518 TTCCCCAAAAACACTCCCGC 61.111 55.000 0.00 0.00 0.00 6.13
6471 8647 2.570284 CCCCAAAAACACTCCCGCC 61.570 63.158 0.00 0.00 0.00 6.13
6472 8648 2.570284 CCCAAAAACACTCCCGCCC 61.570 63.158 0.00 0.00 0.00 6.13
6473 8649 2.642700 CAAAAACACTCCCGCCCG 59.357 61.111 0.00 0.00 0.00 6.13
6474 8650 3.292159 AAAAACACTCCCGCCCGC 61.292 61.111 0.00 0.00 0.00 6.13
6505 8681 3.271250 CCCCCAACCAGTCATGAAG 57.729 57.895 0.00 0.00 0.00 3.02
6506 8682 0.323725 CCCCCAACCAGTCATGAAGG 60.324 60.000 12.66 12.66 0.00 3.46
6507 8683 0.698238 CCCCAACCAGTCATGAAGGA 59.302 55.000 19.39 0.00 0.00 3.36
6508 8684 1.614317 CCCCAACCAGTCATGAAGGAC 60.614 57.143 19.39 0.00 38.08 3.85
6509 8685 1.442769 CCAACCAGTCATGAAGGACG 58.557 55.000 19.39 10.65 42.62 4.79
6510 8686 0.798776 CAACCAGTCATGAAGGACGC 59.201 55.000 19.39 0.00 42.62 5.19
6511 8687 0.321653 AACCAGTCATGAAGGACGCC 60.322 55.000 19.39 0.00 42.62 5.68
6512 8688 1.296392 CCAGTCATGAAGGACGCCA 59.704 57.895 9.35 0.00 42.62 5.69
6513 8689 0.107508 CCAGTCATGAAGGACGCCAT 60.108 55.000 9.35 0.00 42.62 4.40
6514 8690 1.293924 CAGTCATGAAGGACGCCATC 58.706 55.000 0.00 0.00 42.62 3.51
6515 8691 0.179100 AGTCATGAAGGACGCCATCG 60.179 55.000 0.00 0.00 42.62 3.84
6516 8692 0.179111 GTCATGAAGGACGCCATCGA 60.179 55.000 0.00 0.00 39.41 3.59
6517 8693 0.179111 TCATGAAGGACGCCATCGAC 60.179 55.000 0.00 0.00 39.41 4.20
6530 8706 2.812609 TCGACCTCGACCTCGACG 60.813 66.667 5.73 0.00 44.22 5.12
6531 8707 4.517703 CGACCTCGACCTCGACGC 62.518 72.222 1.47 0.00 44.22 5.19
6532 8708 4.176851 GACCTCGACCTCGACGCC 62.177 72.222 0.00 0.00 44.22 5.68
6535 8711 4.517703 CTCGACCTCGACGCCGTC 62.518 72.222 7.29 7.29 44.22 4.79
6558 8734 4.168291 CCTTGCCTCCCTCGCCTC 62.168 72.222 0.00 0.00 0.00 4.70
6559 8735 4.521062 CTTGCCTCCCTCGCCTCG 62.521 72.222 0.00 0.00 0.00 4.63
6585 8761 4.382320 CGTCGCCCCCTTCGGAAA 62.382 66.667 0.00 0.00 0.00 3.13
6586 8762 2.032987 GTCGCCCCCTTCGGAAAA 59.967 61.111 0.00 0.00 0.00 2.29
6587 8763 2.038837 GTCGCCCCCTTCGGAAAAG 61.039 63.158 0.00 0.00 0.00 2.27
6588 8764 2.750237 CGCCCCCTTCGGAAAAGG 60.750 66.667 0.00 0.00 37.17 3.11
6589 8765 3.068691 GCCCCCTTCGGAAAAGGC 61.069 66.667 8.91 8.91 36.10 4.35
6590 8766 2.438795 CCCCCTTCGGAAAAGGCA 59.561 61.111 0.00 0.00 36.10 4.75
6591 8767 1.228737 CCCCCTTCGGAAAAGGCAA 60.229 57.895 0.00 0.00 36.10 4.52
6592 8768 1.250840 CCCCCTTCGGAAAAGGCAAG 61.251 60.000 0.00 0.00 36.10 4.01
6593 8769 1.586541 CCCTTCGGAAAAGGCAAGC 59.413 57.895 0.00 0.00 36.10 4.01
6594 8770 1.586541 CCTTCGGAAAAGGCAAGCC 59.413 57.895 2.02 2.02 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.363018 CTCCTCTGCCTCGGGTCA 60.363 66.667 0.00 0.00 0.00 4.02
17 18 1.075659 GAGGCCTTTGGTTGCTCCT 59.924 57.895 6.77 0.00 37.07 3.69
106 107 4.191015 GCCATCGGTTCCCTCCCC 62.191 72.222 0.00 0.00 0.00 4.81
154 156 3.724478 TGTCTCCTCAAGGATACACCAT 58.276 45.455 11.96 0.00 43.57 3.55
182 184 9.881773 TTGCAGATAAGGGGAATAGAAAATATT 57.118 29.630 0.00 0.00 0.00 1.28
201 203 6.183360 GCAGTCCTACAAATATGTTTGCAGAT 60.183 38.462 14.80 0.00 46.84 2.90
210 212 6.682423 TGACAATGCAGTCCTACAAATATG 57.318 37.500 3.85 0.00 37.73 1.78
213 215 5.297776 GCTATGACAATGCAGTCCTACAAAT 59.702 40.000 3.85 0.00 37.73 2.32
221 223 0.305922 GCGGCTATGACAATGCAGTC 59.694 55.000 0.00 0.00 38.99 3.51
425 823 5.481473 AGATGTCAATTAGTGGTGGCATTTT 59.519 36.000 0.00 0.00 40.09 1.82
462 860 7.173047 TGGTATGATGAATTGTATCATTGTCCG 59.827 37.037 15.94 0.00 41.25 4.79
543 947 3.517038 AACCCCTACCCACCTGGCT 62.517 63.158 0.00 0.00 37.83 4.75
544 948 1.209523 TAAACCCCTACCCACCTGGC 61.210 60.000 0.00 0.00 37.83 4.85
545 949 0.916809 CTAAACCCCTACCCACCTGG 59.083 60.000 0.00 0.00 41.37 4.45
546 950 0.916809 CCTAAACCCCTACCCACCTG 59.083 60.000 0.00 0.00 0.00 4.00
547 951 0.801574 TCCTAAACCCCTACCCACCT 59.198 55.000 0.00 0.00 0.00 4.00
548 952 1.210538 CTCCTAAACCCCTACCCACC 58.789 60.000 0.00 0.00 0.00 4.61
549 953 2.259014 TCTCCTAAACCCCTACCCAC 57.741 55.000 0.00 0.00 0.00 4.61
550 954 2.841795 CTTCTCCTAAACCCCTACCCA 58.158 52.381 0.00 0.00 0.00 4.51
551 955 1.489649 GCTTCTCCTAAACCCCTACCC 59.510 57.143 0.00 0.00 0.00 3.69
652 1056 2.233922 GACGGAGGTGGAGAATTTGAGA 59.766 50.000 0.00 0.00 0.00 3.27
691 1095 2.975851 GTGCTTCACAAAAGAATCAGCG 59.024 45.455 0.00 0.00 34.08 5.18
757 1161 0.531200 GTCAGTCCCTTACCACGAGG 59.469 60.000 0.00 0.00 42.21 4.63
771 1175 1.977544 CGGAAGAGACGGGGTCAGT 60.978 63.158 0.00 0.00 34.60 3.41
778 1182 2.536997 ATTTGGGGCGGAAGAGACGG 62.537 60.000 0.00 0.00 0.00 4.79
960 1374 1.370437 CAGAGGCGGATCCAGATGG 59.630 63.158 13.41 0.00 37.29 3.51
1233 1647 2.169769 CCTTGGGTTAATAGCCTCGTCA 59.830 50.000 0.00 0.00 42.60 4.35
1362 1776 4.397103 TCAATCATCCTGTTGACAGCATTC 59.603 41.667 5.62 0.00 42.47 2.67
1667 2101 1.682702 CCAGCCTGCAATATGGACACA 60.683 52.381 5.04 0.00 34.60 3.72
1697 2131 1.059913 CACCTCCAGTTCCAGTTCCT 58.940 55.000 0.00 0.00 0.00 3.36
1718 2152 2.760092 GGCAATTCCAGCAATTACAGGA 59.240 45.455 0.00 0.00 32.48 3.86
1805 2239 1.544093 CCTTCTTGAGCCTGAACTGCA 60.544 52.381 0.00 0.00 0.00 4.41
2021 2455 6.266131 TGCTAATTCATTCTCCCACCTTAT 57.734 37.500 0.00 0.00 0.00 1.73
2027 2461 7.236225 TCTCTGATATGCTAATTCATTCTCCCA 59.764 37.037 0.00 0.00 0.00 4.37
2064 2500 7.449247 AGAGGAAGAGGACATTAAATCTATGC 58.551 38.462 0.00 0.00 0.00 3.14
2067 2503 7.092891 TGCAAGAGGAAGAGGACATTAAATCTA 60.093 37.037 0.00 0.00 0.00 1.98
2115 2551 1.131883 GCTCGCACATCTGCAAAATCT 59.868 47.619 0.00 0.00 44.50 2.40
2124 2560 1.233019 GCATTATGGCTCGCACATCT 58.767 50.000 0.00 0.00 0.00 2.90
2221 2659 9.338291 GTGTGCAGCAATCATATAAATATCAAG 57.662 33.333 0.00 0.00 0.00 3.02
2319 2765 3.146104 ACATTGTTTGCTCCTAGCTGT 57.854 42.857 0.00 0.00 42.97 4.40
2390 2836 6.039829 AGAGCTCTTTTTGAACCGAAATCTTT 59.960 34.615 11.45 0.00 0.00 2.52
2420 2866 7.817440 TGACTAATAATAATTTGGGGGCACTA 58.183 34.615 0.00 0.00 0.00 2.74
2443 2889 9.303116 GACCCTTAGATCTAAGACAATAGATGA 57.697 37.037 34.41 3.31 43.90 2.92
2445 2891 7.945664 ACGACCCTTAGATCTAAGACAATAGAT 59.054 37.037 34.41 11.50 43.90 1.98
2522 2975 3.889520 CCTGAAACCAGGTACTCCTAC 57.110 52.381 0.00 0.00 44.84 3.18
2571 3025 8.310382 ACCATAGATCTGAGCTTATATTCACAC 58.690 37.037 5.18 0.00 0.00 3.82
2575 3029 8.526978 TGTGACCATAGATCTGAGCTTATATTC 58.473 37.037 5.18 0.00 0.00 1.75
2577 3031 7.452813 TGTGTGACCATAGATCTGAGCTTATAT 59.547 37.037 5.18 0.00 0.00 0.86
2654 3109 9.209175 GAAGATAGCATTCTATTCACGGTTATT 57.791 33.333 0.00 0.00 35.72 1.40
2679 3134 9.396022 CCTGAGCAATTAAGTTCTTATTTAGGA 57.604 33.333 0.00 0.00 0.00 2.94
2761 3216 7.794041 AGCAGATCTCATCTTTTAATCTCTGT 58.206 34.615 0.00 0.00 37.58 3.41
2763 3218 9.146586 AGTAGCAGATCTCATCTTTTAATCTCT 57.853 33.333 0.00 0.00 37.58 3.10
2808 3263 2.795175 TTAATCTCGCTGGATCCGAC 57.205 50.000 7.39 0.00 0.00 4.79
2811 3266 4.442706 TCTTGTTTAATCTCGCTGGATCC 58.557 43.478 4.20 4.20 0.00 3.36
2955 3413 2.823984 TGCTGACTTTGCAACAATTGG 58.176 42.857 10.83 0.00 37.51 3.16
2959 3417 3.591196 AACTTGCTGACTTTGCAACAA 57.409 38.095 0.00 0.00 44.24 2.83
3004 3462 2.202236 ATTGCCGCAGTGATGGGAGT 62.202 55.000 0.00 0.00 0.00 3.85
3015 3473 4.069304 GGGAGTACATATAAATTGCCGCA 58.931 43.478 0.00 0.00 0.00 5.69
3018 3476 4.935808 CGGAGGGAGTACATATAAATTGCC 59.064 45.833 0.00 0.00 0.00 4.52
3043 3503 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
3045 3505 5.203358 TCATTTCTGCGACGAGTAATTTG 57.797 39.130 0.00 0.00 0.00 2.32
3046 3506 5.856126 TTCATTTCTGCGACGAGTAATTT 57.144 34.783 0.00 0.00 0.00 1.82
3049 3509 4.242475 ACATTCATTTCTGCGACGAGTAA 58.758 39.130 0.00 0.00 0.00 2.24
3054 3514 5.915196 TCTAGATACATTCATTTCTGCGACG 59.085 40.000 0.00 0.00 0.00 5.12
3084 3544 8.700051 GCAGGTATGGATGTATCTAGATGTATT 58.300 37.037 15.79 0.00 0.00 1.89
3085 3545 7.013750 CGCAGGTATGGATGTATCTAGATGTAT 59.986 40.741 15.79 9.11 0.00 2.29
3088 3548 5.358160 TCGCAGGTATGGATGTATCTAGATG 59.642 44.000 15.79 0.00 0.00 2.90
3089 3549 5.358442 GTCGCAGGTATGGATGTATCTAGAT 59.642 44.000 10.73 10.73 0.00 1.98
3101 3561 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
3105 3565 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
3106 3566 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
3107 3567 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
3119 3589 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
3123 3593 6.095160 CACTATACATATACTCCCTCCGTTCC 59.905 46.154 0.00 0.00 0.00 3.62
3125 3595 6.550163 ACACTATACATATACTCCCTCCGTT 58.450 40.000 0.00 0.00 0.00 4.44
3405 3875 7.390718 AGGTGAAGAAATGGTCAGTGTTATTAC 59.609 37.037 0.00 0.00 0.00 1.89
3466 3936 8.465999 CCTAGTATGGCATGTAAATTTGTTTCA 58.534 33.333 10.98 0.00 0.00 2.69
3516 3986 7.545489 TGTATTGTACACATATGAACCGTGTA 58.455 34.615 10.38 4.40 43.36 2.90
3520 3990 7.764695 TCTTGTATTGTACACATATGAACCG 57.235 36.000 10.38 0.00 38.63 4.44
3521 3991 8.395633 GGTTCTTGTATTGTACACATATGAACC 58.604 37.037 21.72 21.72 40.12 3.62
3581 4054 7.221452 CCAAGAAAACTGAACTCAATTTGTCAG 59.779 37.037 11.80 11.80 0.00 3.51
4103 4582 4.494855 CGATTTAGAAGGCAAACTAGCTGC 60.495 45.833 8.56 8.56 39.16 5.25
4114 4593 1.954927 CCCCAGTCGATTTAGAAGGC 58.045 55.000 0.00 0.00 0.00 4.35
4291 4770 5.306678 AGGCCAACCAAAGTATTGAAATTCA 59.693 36.000 5.01 0.00 38.94 2.57
4329 4808 6.493449 TTAATGCTTGATCACGTCATTTCA 57.507 33.333 19.23 9.81 36.54 2.69
4484 4970 5.357742 TGAATGCAGGCTAATACTGAGAA 57.642 39.130 0.00 0.00 38.20 2.87
4496 4985 2.760092 TGGGTCTTATTTGAATGCAGGC 59.240 45.455 0.00 0.00 0.00 4.85
4516 5005 6.638873 CGCCATTCAGTAACTAGTAGAAGATG 59.361 42.308 3.59 0.00 0.00 2.90
4522 5011 4.913335 TCCGCCATTCAGTAACTAGTAG 57.087 45.455 0.00 0.00 0.00 2.57
4523 5012 5.047164 TGTTTCCGCCATTCAGTAACTAGTA 60.047 40.000 0.00 0.00 0.00 1.82
4524 5013 4.251268 GTTTCCGCCATTCAGTAACTAGT 58.749 43.478 0.00 0.00 0.00 2.57
4614 5103 2.656947 TGTTGGTAAAAGCTGGCTCT 57.343 45.000 0.00 0.00 0.00 4.09
4681 5170 2.094545 GCAGGAACAAGTTGCCTAATGG 60.095 50.000 1.81 0.00 31.79 3.16
4744 5233 6.703319 TGGAAATTACCGAGTGTTGAATCTA 58.297 36.000 0.00 0.00 0.00 1.98
4787 5276 5.701290 ACGAAGTTTCTTATGGGCATATAGC 59.299 40.000 0.00 0.00 37.78 2.97
4788 5277 9.436957 AATACGAAGTTTCTTATGGGCATATAG 57.563 33.333 0.00 0.00 37.78 1.31
4789 5278 9.787435 AAATACGAAGTTTCTTATGGGCATATA 57.213 29.630 0.00 0.00 37.78 0.86
4790 5279 8.691661 AAATACGAAGTTTCTTATGGGCATAT 57.308 30.769 0.00 0.00 37.78 1.78
4791 5280 7.771361 TGAAATACGAAGTTTCTTATGGGCATA 59.229 33.333 0.00 0.00 37.78 3.14
4792 5281 6.601613 TGAAATACGAAGTTTCTTATGGGCAT 59.398 34.615 0.00 0.00 37.78 4.40
4849 5338 2.019249 TCAACCATGCAAGAGCTATGC 58.981 47.619 15.28 15.28 44.08 3.14
4850 5339 3.538591 TCTCAACCATGCAAGAGCTATG 58.461 45.455 0.00 0.00 42.74 2.23
4884 5373 2.760092 CAACATATTTGGGTGGGTCTGG 59.240 50.000 0.00 0.00 0.00 3.86
4936 5425 6.014840 ACCTTCAGAGCATCATCATTGTTTTT 60.015 34.615 0.00 0.00 37.82 1.94
4956 5445 2.100605 ACTTTGATGCCGAGACCTTC 57.899 50.000 0.00 0.00 0.00 3.46
5004 5493 1.281419 TCTATGACCGCCCTGGAAAA 58.719 50.000 0.00 0.00 42.00 2.29
5025 5514 7.334421 GGTGACTACATAAGCTGATCTTGAAAA 59.666 37.037 0.00 0.00 36.25 2.29
5056 5545 5.677319 AAGAAAATCAGACCTCCGTATGA 57.323 39.130 0.00 0.00 43.98 2.15
5058 5547 9.462606 AAAAATAAGAAAATCAGACCTCCGTAT 57.537 29.630 0.00 0.00 0.00 3.06
5082 5593 2.163412 CGGCTGCAGCATTTACCTAAAA 59.837 45.455 37.63 0.00 44.36 1.52
5258 5769 7.190920 ACTTGTGAGAAACTTATAGTGCAAC 57.809 36.000 0.00 0.00 0.00 4.17
5442 5953 5.105716 TCAGAATCTAGACCAGTAGTTGTGC 60.106 44.000 0.00 0.00 0.00 4.57
5443 5954 6.405286 CCTCAGAATCTAGACCAGTAGTTGTG 60.405 46.154 0.00 0.00 0.00 3.33
5643 6154 4.499865 GCGAGTCTCAACAGGCATTATCTA 60.500 45.833 0.00 0.00 0.00 1.98
5648 6159 0.674895 GGCGAGTCTCAACAGGCATT 60.675 55.000 0.00 0.00 33.27 3.56
5854 6366 0.807667 ATGAAGAAGAGCGCGCGATT 60.808 50.000 37.18 24.06 0.00 3.34
5861 6373 0.250234 TGGGGACATGAAGAAGAGCG 59.750 55.000 0.00 0.00 33.40 5.03
5881 6412 4.838986 GGGACAAGGAGATAAGTAGGCATA 59.161 45.833 0.00 0.00 0.00 3.14
5905 8080 4.126437 TGCATCACGAATAACCGATGAAT 58.874 39.130 0.00 0.00 37.97 2.57
5919 8094 0.676466 TTAGTTGGGCCTGCATCACG 60.676 55.000 4.53 0.00 0.00 4.35
5996 8172 9.987272 CTCCTCCAATTTGAGTTTTAAGAAATT 57.013 29.630 5.86 0.00 0.00 1.82
5999 8175 6.549364 TGCTCCTCCAATTTGAGTTTTAAGAA 59.451 34.615 5.86 0.00 0.00 2.52
6002 8178 6.723298 TTGCTCCTCCAATTTGAGTTTTAA 57.277 33.333 5.86 0.00 0.00 1.52
6032 8208 7.655732 CCCTAAACCCAAAACTTCACTAAAATG 59.344 37.037 0.00 0.00 0.00 2.32
6038 8214 3.572642 CCCCTAAACCCAAAACTTCACT 58.427 45.455 0.00 0.00 0.00 3.41
6042 8218 2.022820 ACACCCCCTAAACCCAAAACTT 60.023 45.455 0.00 0.00 0.00 2.66
6043 8219 1.576757 ACACCCCCTAAACCCAAAACT 59.423 47.619 0.00 0.00 0.00 2.66
6044 8220 2.091098 ACACCCCCTAAACCCAAAAC 57.909 50.000 0.00 0.00 0.00 2.43
6045 8221 2.871007 AACACCCCCTAAACCCAAAA 57.129 45.000 0.00 0.00 0.00 2.44
6046 8222 2.772515 CAAAACACCCCCTAAACCCAAA 59.227 45.455 0.00 0.00 0.00 3.28
6047 8223 2.292984 ACAAAACACCCCCTAAACCCAA 60.293 45.455 0.00 0.00 0.00 4.12
6048 8224 1.291335 ACAAAACACCCCCTAAACCCA 59.709 47.619 0.00 0.00 0.00 4.51
6049 8225 1.689813 CACAAAACACCCCCTAAACCC 59.310 52.381 0.00 0.00 0.00 4.11
6050 8226 1.069513 GCACAAAACACCCCCTAAACC 59.930 52.381 0.00 0.00 0.00 3.27
6051 8227 2.036387 AGCACAAAACACCCCCTAAAC 58.964 47.619 0.00 0.00 0.00 2.01
6052 8228 2.035632 CAGCACAAAACACCCCCTAAA 58.964 47.619 0.00 0.00 0.00 1.85
6053 8229 1.063567 ACAGCACAAAACACCCCCTAA 60.064 47.619 0.00 0.00 0.00 2.69
6054 8230 0.553819 ACAGCACAAAACACCCCCTA 59.446 50.000 0.00 0.00 0.00 3.53
6055 8231 0.755327 GACAGCACAAAACACCCCCT 60.755 55.000 0.00 0.00 0.00 4.79
6056 8232 1.739667 GACAGCACAAAACACCCCC 59.260 57.895 0.00 0.00 0.00 5.40
6057 8233 1.739667 GGACAGCACAAAACACCCC 59.260 57.895 0.00 0.00 0.00 4.95
6058 8234 1.358759 CGGACAGCACAAAACACCC 59.641 57.895 0.00 0.00 0.00 4.61
6059 8235 0.028902 GACGGACAGCACAAAACACC 59.971 55.000 0.00 0.00 0.00 4.16
6060 8236 0.315869 CGACGGACAGCACAAAACAC 60.316 55.000 0.00 0.00 0.00 3.32
6061 8237 1.433053 CCGACGGACAGCACAAAACA 61.433 55.000 8.64 0.00 0.00 2.83
6062 8238 1.278637 CCGACGGACAGCACAAAAC 59.721 57.895 8.64 0.00 0.00 2.43
6063 8239 0.745128 AACCGACGGACAGCACAAAA 60.745 50.000 23.38 0.00 0.00 2.44
6064 8240 1.153329 AACCGACGGACAGCACAAA 60.153 52.632 23.38 0.00 0.00 2.83
6065 8241 1.885388 CAACCGACGGACAGCACAA 60.885 57.895 23.38 0.00 0.00 3.33
6066 8242 2.279851 CAACCGACGGACAGCACA 60.280 61.111 23.38 0.00 0.00 4.57
6067 8243 2.028484 TCAACCGACGGACAGCAC 59.972 61.111 23.38 0.00 0.00 4.40
6068 8244 2.028484 GTCAACCGACGGACAGCA 59.972 61.111 23.38 0.00 34.22 4.41
6076 8252 1.129209 GCTTTACGCGTCAACCGAC 59.871 57.895 18.63 0.00 39.56 4.79
6077 8253 2.023223 GGCTTTACGCGTCAACCGA 61.023 57.895 18.63 0.00 40.44 4.69
6078 8254 2.472934 GGCTTTACGCGTCAACCG 59.527 61.111 18.63 0.81 40.44 4.44
6079 8255 2.472934 CGGCTTTACGCGTCAACC 59.527 61.111 18.63 14.18 40.44 3.77
6087 8263 0.879090 AAGAAAAGGGCGGCTTTACG 59.121 50.000 6.80 0.00 0.00 3.18
6088 8264 3.380479 AAAAGAAAAGGGCGGCTTTAC 57.620 42.857 6.80 4.87 30.97 2.01
6106 8282 1.670791 AGGTCGCCGAAGTTCAAAAA 58.329 45.000 3.32 0.00 0.00 1.94
6107 8283 1.670791 AAGGTCGCCGAAGTTCAAAA 58.329 45.000 3.32 0.00 0.00 2.44
6108 8284 1.670791 AAAGGTCGCCGAAGTTCAAA 58.329 45.000 3.32 0.00 0.00 2.69
6109 8285 2.529780 TAAAGGTCGCCGAAGTTCAA 57.470 45.000 3.32 0.00 0.00 2.69
6110 8286 2.754946 ATAAAGGTCGCCGAAGTTCA 57.245 45.000 3.32 0.00 0.00 3.18
6111 8287 5.535043 TTTAATAAAGGTCGCCGAAGTTC 57.465 39.130 0.00 0.00 0.00 3.01
6112 8288 7.119553 TGTTATTTAATAAAGGTCGCCGAAGTT 59.880 33.333 0.00 0.00 0.00 2.66
6113 8289 6.594937 TGTTATTTAATAAAGGTCGCCGAAGT 59.405 34.615 0.00 0.00 0.00 3.01
6114 8290 7.007313 TGTTATTTAATAAAGGTCGCCGAAG 57.993 36.000 0.00 0.00 0.00 3.79
6115 8291 6.981762 TGTTATTTAATAAAGGTCGCCGAA 57.018 33.333 0.00 0.00 0.00 4.30
6116 8292 6.183360 GGTTGTTATTTAATAAAGGTCGCCGA 60.183 38.462 0.00 0.00 0.00 5.54
6117 8293 5.967088 GGTTGTTATTTAATAAAGGTCGCCG 59.033 40.000 0.00 0.00 0.00 6.46
6118 8294 6.854778 TGGTTGTTATTTAATAAAGGTCGCC 58.145 36.000 0.00 0.00 0.00 5.54
6119 8295 7.971722 ACATGGTTGTTATTTAATAAAGGTCGC 59.028 33.333 0.00 0.00 29.55 5.19
6120 8296 9.498307 GACATGGTTGTTATTTAATAAAGGTCG 57.502 33.333 0.00 0.00 35.79 4.79
6130 8306 9.999660 TGTAGTAACAGACATGGTTGTTATTTA 57.000 29.630 20.29 15.09 40.63 1.40
6131 8307 8.911918 TGTAGTAACAGACATGGTTGTTATTT 57.088 30.769 20.29 15.75 40.63 1.40
6132 8308 8.911918 TTGTAGTAACAGACATGGTTGTTATT 57.088 30.769 20.29 18.77 40.63 1.40
6133 8309 8.372459 TCTTGTAGTAACAGACATGGTTGTTAT 58.628 33.333 20.29 14.20 40.63 1.89
6134 8310 7.728148 TCTTGTAGTAACAGACATGGTTGTTA 58.272 34.615 15.97 15.97 38.41 2.41
6135 8311 6.588204 TCTTGTAGTAACAGACATGGTTGTT 58.412 36.000 17.55 17.55 40.39 2.83
6136 8312 6.041637 TCTCTTGTAGTAACAGACATGGTTGT 59.958 38.462 0.00 0.00 36.83 3.32
6137 8313 6.455647 TCTCTTGTAGTAACAGACATGGTTG 58.544 40.000 0.00 0.00 36.83 3.77
6138 8314 6.295349 CCTCTCTTGTAGTAACAGACATGGTT 60.295 42.308 0.00 0.00 36.83 3.67
6139 8315 5.186021 CCTCTCTTGTAGTAACAGACATGGT 59.814 44.000 0.00 0.00 36.83 3.55
6140 8316 5.419155 TCCTCTCTTGTAGTAACAGACATGG 59.581 44.000 0.00 0.00 36.83 3.66
6141 8317 6.405286 CCTCCTCTCTTGTAGTAACAGACATG 60.405 46.154 0.00 0.00 36.83 3.21
6142 8318 5.654650 CCTCCTCTCTTGTAGTAACAGACAT 59.345 44.000 0.00 0.00 36.83 3.06
6143 8319 5.010933 CCTCCTCTCTTGTAGTAACAGACA 58.989 45.833 0.00 0.00 36.83 3.41
6144 8320 5.011586 ACCTCCTCTCTTGTAGTAACAGAC 58.988 45.833 0.00 0.00 36.83 3.51
6145 8321 5.258216 ACCTCCTCTCTTGTAGTAACAGA 57.742 43.478 0.00 0.00 36.83 3.41
6146 8322 5.986501 AACCTCCTCTCTTGTAGTAACAG 57.013 43.478 0.00 0.00 36.83 3.16
6147 8323 7.844493 TTTAACCTCCTCTCTTGTAGTAACA 57.156 36.000 0.00 0.00 0.00 2.41
6148 8324 9.205719 CTTTTTAACCTCCTCTCTTGTAGTAAC 57.794 37.037 0.00 0.00 0.00 2.50
6149 8325 8.931568 ACTTTTTAACCTCCTCTCTTGTAGTAA 58.068 33.333 0.00 0.00 0.00 2.24
6150 8326 8.488308 ACTTTTTAACCTCCTCTCTTGTAGTA 57.512 34.615 0.00 0.00 0.00 1.82
6151 8327 7.376335 ACTTTTTAACCTCCTCTCTTGTAGT 57.624 36.000 0.00 0.00 0.00 2.73
6152 8328 8.035984 CCTACTTTTTAACCTCCTCTCTTGTAG 58.964 40.741 0.00 0.00 0.00 2.74
6153 8329 7.038516 CCCTACTTTTTAACCTCCTCTCTTGTA 60.039 40.741 0.00 0.00 0.00 2.41
6154 8330 6.239915 CCCTACTTTTTAACCTCCTCTCTTGT 60.240 42.308 0.00 0.00 0.00 3.16
6155 8331 6.013639 TCCCTACTTTTTAACCTCCTCTCTTG 60.014 42.308 0.00 0.00 0.00 3.02
6156 8332 6.089502 TCCCTACTTTTTAACCTCCTCTCTT 58.910 40.000 0.00 0.00 0.00 2.85
6157 8333 5.662597 TCCCTACTTTTTAACCTCCTCTCT 58.337 41.667 0.00 0.00 0.00 3.10
6158 8334 5.484644 ACTCCCTACTTTTTAACCTCCTCTC 59.515 44.000 0.00 0.00 0.00 3.20
6159 8335 5.248705 CACTCCCTACTTTTTAACCTCCTCT 59.751 44.000 0.00 0.00 0.00 3.69
6160 8336 5.489249 CACTCCCTACTTTTTAACCTCCTC 58.511 45.833 0.00 0.00 0.00 3.71
6161 8337 4.263374 GCACTCCCTACTTTTTAACCTCCT 60.263 45.833 0.00 0.00 0.00 3.69
6162 8338 4.008330 GCACTCCCTACTTTTTAACCTCC 58.992 47.826 0.00 0.00 0.00 4.30
6163 8339 4.695928 CAGCACTCCCTACTTTTTAACCTC 59.304 45.833 0.00 0.00 0.00 3.85
6164 8340 4.652822 CAGCACTCCCTACTTTTTAACCT 58.347 43.478 0.00 0.00 0.00 3.50
6165 8341 3.190744 GCAGCACTCCCTACTTTTTAACC 59.809 47.826 0.00 0.00 0.00 2.85
6166 8342 4.072839 AGCAGCACTCCCTACTTTTTAAC 58.927 43.478 0.00 0.00 0.00 2.01
6167 8343 4.202419 TGAGCAGCACTCCCTACTTTTTAA 60.202 41.667 0.00 0.00 45.61 1.52
6168 8344 3.326588 TGAGCAGCACTCCCTACTTTTTA 59.673 43.478 0.00 0.00 45.61 1.52
6169 8345 2.106511 TGAGCAGCACTCCCTACTTTTT 59.893 45.455 0.00 0.00 45.61 1.94
6170 8346 1.699634 TGAGCAGCACTCCCTACTTTT 59.300 47.619 0.00 0.00 45.61 2.27
6171 8347 1.277557 CTGAGCAGCACTCCCTACTTT 59.722 52.381 0.00 0.00 45.61 2.66
6172 8348 0.901124 CTGAGCAGCACTCCCTACTT 59.099 55.000 0.00 0.00 45.61 2.24
6173 8349 0.252012 ACTGAGCAGCACTCCCTACT 60.252 55.000 0.00 0.00 45.61 2.57
6174 8350 1.135333 GTACTGAGCAGCACTCCCTAC 59.865 57.143 0.00 1.25 45.61 3.18
6175 8351 1.475403 GTACTGAGCAGCACTCCCTA 58.525 55.000 0.00 0.00 45.61 3.53
6176 8352 1.599606 CGTACTGAGCAGCACTCCCT 61.600 60.000 0.00 0.00 45.61 4.20
6177 8353 1.153745 CGTACTGAGCAGCACTCCC 60.154 63.158 0.00 0.00 45.61 4.30
6178 8354 0.038159 AACGTACTGAGCAGCACTCC 60.038 55.000 0.00 0.00 45.61 3.85
6179 8355 1.784525 AAACGTACTGAGCAGCACTC 58.215 50.000 0.00 0.02 46.45 3.51
6180 8356 2.135933 GAAAACGTACTGAGCAGCACT 58.864 47.619 0.00 0.00 0.00 4.40
6181 8357 1.194772 GGAAAACGTACTGAGCAGCAC 59.805 52.381 0.00 0.00 0.00 4.40
6182 8358 1.508632 GGAAAACGTACTGAGCAGCA 58.491 50.000 0.00 0.00 0.00 4.41
6183 8359 0.796927 GGGAAAACGTACTGAGCAGC 59.203 55.000 0.00 0.00 0.00 5.25
6184 8360 2.028930 AGAGGGAAAACGTACTGAGCAG 60.029 50.000 0.00 0.00 0.00 4.24
6185 8361 1.968493 AGAGGGAAAACGTACTGAGCA 59.032 47.619 0.00 0.00 0.00 4.26
6186 8362 2.745515 AGAGGGAAAACGTACTGAGC 57.254 50.000 0.00 0.00 0.00 4.26
6187 8363 7.330900 TCTTATAGAGGGAAAACGTACTGAG 57.669 40.000 0.00 0.00 0.00 3.35
6188 8364 6.183360 GCTCTTATAGAGGGAAAACGTACTGA 60.183 42.308 5.90 0.00 42.54 3.41
6189 8365 5.978322 GCTCTTATAGAGGGAAAACGTACTG 59.022 44.000 5.90 0.00 42.54 2.74
6190 8366 5.655532 TGCTCTTATAGAGGGAAAACGTACT 59.344 40.000 5.90 0.00 42.54 2.73
6191 8367 5.899299 TGCTCTTATAGAGGGAAAACGTAC 58.101 41.667 5.90 0.00 42.54 3.67
6192 8368 6.154021 AGTTGCTCTTATAGAGGGAAAACGTA 59.846 38.462 5.90 0.00 42.54 3.57
6193 8369 5.046520 AGTTGCTCTTATAGAGGGAAAACGT 60.047 40.000 5.90 0.00 42.54 3.99
6194 8370 5.420409 AGTTGCTCTTATAGAGGGAAAACG 58.580 41.667 5.90 0.00 42.54 3.60
6195 8371 7.689446 AAAGTTGCTCTTATAGAGGGAAAAC 57.311 36.000 5.90 0.00 42.54 2.43
6196 8372 9.975218 ATTAAAGTTGCTCTTATAGAGGGAAAA 57.025 29.630 5.90 0.00 42.54 2.29
6197 8373 9.396022 CATTAAAGTTGCTCTTATAGAGGGAAA 57.604 33.333 5.90 0.00 42.54 3.13
6198 8374 7.993183 CCATTAAAGTTGCTCTTATAGAGGGAA 59.007 37.037 5.90 0.00 42.54 3.97
6199 8375 7.420214 CCCATTAAAGTTGCTCTTATAGAGGGA 60.420 40.741 5.90 0.00 42.54 4.20
6200 8376 6.712547 CCCATTAAAGTTGCTCTTATAGAGGG 59.287 42.308 5.90 0.00 42.54 4.30
6201 8377 6.712547 CCCCATTAAAGTTGCTCTTATAGAGG 59.287 42.308 5.90 0.00 42.54 3.69
6202 8378 6.205658 GCCCCATTAAAGTTGCTCTTATAGAG 59.794 42.308 0.00 0.00 45.04 2.43
6203 8379 6.062095 GCCCCATTAAAGTTGCTCTTATAGA 58.938 40.000 0.00 0.00 35.02 1.98
6204 8380 5.049405 CGCCCCATTAAAGTTGCTCTTATAG 60.049 44.000 0.00 0.00 35.02 1.31
6205 8381 4.819630 CGCCCCATTAAAGTTGCTCTTATA 59.180 41.667 0.00 0.00 35.02 0.98
6206 8382 3.632145 CGCCCCATTAAAGTTGCTCTTAT 59.368 43.478 0.00 0.00 35.02 1.73
6207 8383 3.013921 CGCCCCATTAAAGTTGCTCTTA 58.986 45.455 0.00 0.00 35.02 2.10
6208 8384 1.818674 CGCCCCATTAAAGTTGCTCTT 59.181 47.619 0.00 0.00 38.10 2.85
6209 8385 1.004277 TCGCCCCATTAAAGTTGCTCT 59.996 47.619 0.00 0.00 0.00 4.09
6210 8386 1.132453 GTCGCCCCATTAAAGTTGCTC 59.868 52.381 0.00 0.00 0.00 4.26
6211 8387 1.173913 GTCGCCCCATTAAAGTTGCT 58.826 50.000 0.00 0.00 0.00 3.91
6212 8388 0.172578 GGTCGCCCCATTAAAGTTGC 59.827 55.000 0.00 0.00 0.00 4.17
6224 8400 2.822701 GGACGAAATGGGTCGCCC 60.823 66.667 7.87 7.87 45.00 6.13
6225 8401 3.192922 CGGACGAAATGGGTCGCC 61.193 66.667 0.00 0.00 45.00 5.54
6226 8402 3.861263 GCGGACGAAATGGGTCGC 61.861 66.667 0.00 0.00 45.00 5.19
6227 8403 3.192922 GGCGGACGAAATGGGTCG 61.193 66.667 0.00 0.00 46.54 4.79
6228 8404 2.822701 GGGCGGACGAAATGGGTC 60.823 66.667 0.00 0.00 0.00 4.46
6229 8405 4.770874 CGGGCGGACGAAATGGGT 62.771 66.667 0.00 0.00 35.47 4.51
6251 8427 4.973055 TCCACGCCGACCCAAACG 62.973 66.667 0.00 0.00 0.00 3.60
6252 8428 1.726533 TTTTCCACGCCGACCCAAAC 61.727 55.000 0.00 0.00 0.00 2.93
6253 8429 1.035932 TTTTTCCACGCCGACCCAAA 61.036 50.000 0.00 0.00 0.00 3.28
6254 8430 1.453379 TTTTTCCACGCCGACCCAA 60.453 52.632 0.00 0.00 0.00 4.12
6255 8431 2.192443 TTTTTCCACGCCGACCCA 59.808 55.556 0.00 0.00 0.00 4.51
6269 8445 0.033366 GCATTGGGCCGTCACTTTTT 59.967 50.000 0.00 0.00 36.11 1.94
6270 8446 1.665442 GCATTGGGCCGTCACTTTT 59.335 52.632 0.00 0.00 36.11 2.27
6271 8447 2.625823 CGCATTGGGCCGTCACTTT 61.626 57.895 0.00 0.00 40.31 2.66
6272 8448 3.055719 CGCATTGGGCCGTCACTT 61.056 61.111 0.00 0.00 40.31 3.16
6280 8456 2.518973 TTTGGATTGGCGCATTGGGC 62.519 55.000 16.71 16.71 40.84 5.36
6281 8457 0.740516 GTTTGGATTGGCGCATTGGG 60.741 55.000 10.83 0.00 0.00 4.12
6282 8458 1.077645 CGTTTGGATTGGCGCATTGG 61.078 55.000 10.83 0.00 0.00 3.16
6283 8459 1.077645 CCGTTTGGATTGGCGCATTG 61.078 55.000 10.83 0.00 37.49 2.82
6284 8460 1.215117 CCGTTTGGATTGGCGCATT 59.785 52.632 10.83 0.00 37.49 3.56
6285 8461 1.677300 TCCGTTTGGATTGGCGCAT 60.677 52.632 10.83 0.00 40.17 4.73
6286 8462 2.281831 TCCGTTTGGATTGGCGCA 60.282 55.556 10.83 0.00 40.17 6.09
6307 8483 1.788586 GCAGACGAAAAGCGAACGC 60.789 57.895 11.31 11.31 44.57 4.84
6308 8484 4.399840 GCAGACGAAAAGCGAACG 57.600 55.556 0.00 0.00 44.57 3.95
6313 8489 4.445545 CGCCCGCAGACGAAAAGC 62.446 66.667 0.00 0.00 43.93 3.51
6314 8490 2.736995 TCGCCCGCAGACGAAAAG 60.737 61.111 0.00 0.00 43.93 2.27
6315 8491 3.039588 GTCGCCCGCAGACGAAAA 61.040 61.111 0.00 0.00 43.93 2.29
6326 8502 3.140814 GCCTGAAATGGGTCGCCC 61.141 66.667 7.87 7.87 45.71 6.13
6327 8503 2.044946 AGCCTGAAATGGGTCGCC 60.045 61.111 0.00 0.00 31.32 5.54
6328 8504 3.502572 GAGCCTGAAATGGGTCGC 58.497 61.111 0.00 0.00 43.42 5.19
6330 8506 5.852317 CTCAAAATTGAGCCTGAAATGGGTC 60.852 44.000 10.00 5.87 46.97 4.46
6331 8507 3.903090 TCAAAATTGAGCCTGAAATGGGT 59.097 39.130 0.00 0.00 40.97 4.51
6332 8508 4.501071 CTCAAAATTGAGCCTGAAATGGG 58.499 43.478 10.00 0.00 46.97 4.00
6344 8520 5.531634 GACACAAATCAGGCTCAAAATTGA 58.468 37.500 0.00 0.00 35.57 2.57
6345 8521 4.383649 CGACACAAATCAGGCTCAAAATTG 59.616 41.667 0.00 0.00 0.00 2.32
6346 8522 4.549458 CGACACAAATCAGGCTCAAAATT 58.451 39.130 0.00 0.00 0.00 1.82
6347 8523 3.057315 CCGACACAAATCAGGCTCAAAAT 60.057 43.478 0.00 0.00 0.00 1.82
6348 8524 2.293122 CCGACACAAATCAGGCTCAAAA 59.707 45.455 0.00 0.00 0.00 2.44
6349 8525 1.879380 CCGACACAAATCAGGCTCAAA 59.121 47.619 0.00 0.00 0.00 2.69
6350 8526 1.522668 CCGACACAAATCAGGCTCAA 58.477 50.000 0.00 0.00 0.00 3.02
6351 8527 0.955428 GCCGACACAAATCAGGCTCA 60.955 55.000 0.00 0.00 44.06 4.26
6352 8528 1.796796 GCCGACACAAATCAGGCTC 59.203 57.895 0.00 0.00 44.06 4.70
6353 8529 2.034879 CGCCGACACAAATCAGGCT 61.035 57.895 3.24 0.00 45.16 4.58
6354 8530 2.480555 CGCCGACACAAATCAGGC 59.519 61.111 0.00 0.00 44.00 4.85
6355 8531 2.480555 GCGCCGACACAAATCAGG 59.519 61.111 0.00 0.00 0.00 3.86
6356 8532 2.096406 CGCGCCGACACAAATCAG 59.904 61.111 0.00 0.00 0.00 2.90
6357 8533 3.418913 CCGCGCCGACACAAATCA 61.419 61.111 0.00 0.00 0.00 2.57
6358 8534 3.115892 TCCGCGCCGACACAAATC 61.116 61.111 0.00 0.00 0.00 2.17
6359 8535 3.419759 GTCCGCGCCGACACAAAT 61.420 61.111 21.55 0.00 32.74 2.32
6360 8536 4.893601 TGTCCGCGCCGACACAAA 62.894 61.111 24.54 5.13 37.85 2.83
6361 8537 4.673298 ATGTCCGCGCCGACACAA 62.673 61.111 29.27 11.20 45.19 3.33
6364 8540 4.794439 CTCATGTCCGCGCCGACA 62.794 66.667 28.94 28.94 46.36 4.35
6365 8541 4.492160 TCTCATGTCCGCGCCGAC 62.492 66.667 20.04 20.04 0.00 4.79
6366 8542 4.193334 CTCTCATGTCCGCGCCGA 62.193 66.667 0.00 0.00 0.00 5.54
6368 8544 4.899239 CCCTCTCATGTCCGCGCC 62.899 72.222 0.00 0.00 0.00 6.53
6369 8545 3.838271 TCCCTCTCATGTCCGCGC 61.838 66.667 0.00 0.00 0.00 6.86
6370 8546 2.105128 GTCCCTCTCATGTCCGCG 59.895 66.667 0.00 0.00 0.00 6.46
6371 8547 2.105128 CGTCCCTCTCATGTCCGC 59.895 66.667 0.00 0.00 0.00 5.54
6372 8548 2.105128 GCGTCCCTCTCATGTCCG 59.895 66.667 0.00 0.00 0.00 4.79
6373 8549 2.105128 CGCGTCCCTCTCATGTCC 59.895 66.667 0.00 0.00 0.00 4.02
6374 8550 2.583593 GCGCGTCCCTCTCATGTC 60.584 66.667 8.43 0.00 0.00 3.06
6375 8551 4.498520 CGCGCGTCCCTCTCATGT 62.499 66.667 24.19 0.00 0.00 3.21
6391 8567 4.615834 GGAGAGAGTAGGCGCGCG 62.616 72.222 28.44 28.44 0.00 6.86
6392 8568 4.615834 CGGAGAGAGTAGGCGCGC 62.616 72.222 25.94 25.94 0.00 6.86
6393 8569 3.955101 CCGGAGAGAGTAGGCGCG 61.955 72.222 0.00 0.00 0.00 6.86
6394 8570 3.597728 CCCGGAGAGAGTAGGCGC 61.598 72.222 0.73 0.00 0.00 6.53
6395 8571 3.597728 GCCCGGAGAGAGTAGGCG 61.598 72.222 0.73 0.00 33.18 5.52
6396 8572 3.228017 GGCCCGGAGAGAGTAGGC 61.228 72.222 0.73 0.00 43.09 3.93
6397 8573 2.522193 GGGCCCGGAGAGAGTAGG 60.522 72.222 5.69 0.00 0.00 3.18
6398 8574 2.907917 CGGGCCCGGAGAGAGTAG 60.908 72.222 37.42 3.50 35.56 2.57
6424 8600 0.971959 GGAAATGATGGTGGCTGCCA 60.972 55.000 19.30 19.30 43.48 4.92
6425 8601 1.679559 GGGAAATGATGGTGGCTGCC 61.680 60.000 12.87 12.87 0.00 4.85
6426 8602 1.679559 GGGGAAATGATGGTGGCTGC 61.680 60.000 0.00 0.00 0.00 5.25
6427 8603 1.044790 GGGGGAAATGATGGTGGCTG 61.045 60.000 0.00 0.00 0.00 4.85
6428 8604 1.224003 AGGGGGAAATGATGGTGGCT 61.224 55.000 0.00 0.00 0.00 4.75
6429 8605 0.555769 TAGGGGGAAATGATGGTGGC 59.444 55.000 0.00 0.00 0.00 5.01
6430 8606 3.618120 AATAGGGGGAAATGATGGTGG 57.382 47.619 0.00 0.00 0.00 4.61
6431 8607 4.344968 GGAAAATAGGGGGAAATGATGGTG 59.655 45.833 0.00 0.00 0.00 4.17
6432 8608 4.556697 GGAAAATAGGGGGAAATGATGGT 58.443 43.478 0.00 0.00 0.00 3.55
6433 8609 3.903714 GGGAAAATAGGGGGAAATGATGG 59.096 47.826 0.00 0.00 0.00 3.51
6434 8610 3.903714 GGGGAAAATAGGGGGAAATGATG 59.096 47.826 0.00 0.00 0.00 3.07
6435 8611 3.539832 TGGGGAAAATAGGGGGAAATGAT 59.460 43.478 0.00 0.00 0.00 2.45
6436 8612 2.936576 TGGGGAAAATAGGGGGAAATGA 59.063 45.455 0.00 0.00 0.00 2.57
6437 8613 3.413105 TGGGGAAAATAGGGGGAAATG 57.587 47.619 0.00 0.00 0.00 2.32
6438 8614 4.444047 TTTGGGGAAAATAGGGGGAAAT 57.556 40.909 0.00 0.00 0.00 2.17
6439 8615 3.945283 TTTGGGGAAAATAGGGGGAAA 57.055 42.857 0.00 0.00 0.00 3.13
6440 8616 3.911260 GTTTTTGGGGAAAATAGGGGGAA 59.089 43.478 0.00 0.00 39.29 3.97
6441 8617 3.116317 TGTTTTTGGGGAAAATAGGGGGA 60.116 43.478 0.00 0.00 39.29 4.81
6442 8618 3.008594 GTGTTTTTGGGGAAAATAGGGGG 59.991 47.826 0.00 0.00 39.29 5.40
6443 8619 3.907474 AGTGTTTTTGGGGAAAATAGGGG 59.093 43.478 0.00 0.00 39.29 4.79
6444 8620 4.020573 GGAGTGTTTTTGGGGAAAATAGGG 60.021 45.833 0.00 0.00 39.29 3.53
6445 8621 4.020573 GGGAGTGTTTTTGGGGAAAATAGG 60.021 45.833 0.00 0.00 39.29 2.57
6446 8622 4.321675 CGGGAGTGTTTTTGGGGAAAATAG 60.322 45.833 0.00 0.00 39.29 1.73
6447 8623 3.574826 CGGGAGTGTTTTTGGGGAAAATA 59.425 43.478 0.00 0.00 39.29 1.40
6448 8624 2.367241 CGGGAGTGTTTTTGGGGAAAAT 59.633 45.455 0.00 0.00 39.29 1.82
6449 8625 1.757699 CGGGAGTGTTTTTGGGGAAAA 59.242 47.619 0.00 0.00 34.93 2.29
6450 8626 1.404843 CGGGAGTGTTTTTGGGGAAA 58.595 50.000 0.00 0.00 0.00 3.13
6451 8627 1.110518 GCGGGAGTGTTTTTGGGGAA 61.111 55.000 0.00 0.00 0.00 3.97
6452 8628 1.529713 GCGGGAGTGTTTTTGGGGA 60.530 57.895 0.00 0.00 0.00 4.81
6453 8629 2.570284 GGCGGGAGTGTTTTTGGGG 61.570 63.158 0.00 0.00 0.00 4.96
6454 8630 2.570284 GGGCGGGAGTGTTTTTGGG 61.570 63.158 0.00 0.00 0.00 4.12
6455 8631 2.914908 CGGGCGGGAGTGTTTTTGG 61.915 63.158 0.00 0.00 0.00 3.28
6456 8632 2.642700 CGGGCGGGAGTGTTTTTG 59.357 61.111 0.00 0.00 0.00 2.44
6457 8633 3.292159 GCGGGCGGGAGTGTTTTT 61.292 61.111 0.00 0.00 0.00 1.94
6487 8663 0.323725 CCTTCATGACTGGTTGGGGG 60.324 60.000 0.00 0.00 0.00 5.40
6488 8664 0.698238 TCCTTCATGACTGGTTGGGG 59.302 55.000 12.18 0.00 0.00 4.96
6489 8665 1.826385 GTCCTTCATGACTGGTTGGG 58.174 55.000 12.18 0.59 32.39 4.12
6490 8666 1.442769 CGTCCTTCATGACTGGTTGG 58.557 55.000 12.18 2.03 32.97 3.77
6491 8667 0.798776 GCGTCCTTCATGACTGGTTG 59.201 55.000 12.18 8.15 32.97 3.77
6492 8668 0.321653 GGCGTCCTTCATGACTGGTT 60.322 55.000 12.18 0.00 32.97 3.67
6493 8669 1.296715 GGCGTCCTTCATGACTGGT 59.703 57.895 12.18 0.00 32.97 4.00
6494 8670 0.107508 ATGGCGTCCTTCATGACTGG 60.108 55.000 0.00 0.65 32.97 4.00
6495 8671 1.293924 GATGGCGTCCTTCATGACTG 58.706 55.000 0.00 0.00 32.97 3.51
6496 8672 0.179100 CGATGGCGTCCTTCATGACT 60.179 55.000 0.00 0.00 32.97 3.41
6497 8673 0.179111 TCGATGGCGTCCTTCATGAC 60.179 55.000 0.00 0.00 38.98 3.06
6498 8674 0.179111 GTCGATGGCGTCCTTCATGA 60.179 55.000 0.14 0.00 38.98 3.07
6499 8675 1.154205 GGTCGATGGCGTCCTTCATG 61.154 60.000 0.14 0.00 41.54 3.07
6500 8676 1.144057 GGTCGATGGCGTCCTTCAT 59.856 57.895 0.14 0.00 41.54 2.57
6501 8677 2.577059 GGTCGATGGCGTCCTTCA 59.423 61.111 0.14 0.00 41.54 3.02
6505 8681 3.515286 TCGAGGTCGATGGCGTCC 61.515 66.667 0.14 0.00 44.22 4.79
6541 8717 4.168291 GAGGCGAGGGAGGCAAGG 62.168 72.222 0.00 0.00 39.37 3.61
6542 8718 4.521062 CGAGGCGAGGGAGGCAAG 62.521 72.222 0.00 0.00 39.37 4.01
6577 8753 0.523519 GAGGCTTGCCTTTTCCGAAG 59.476 55.000 15.92 0.00 0.00 3.79
6578 8754 1.234615 CGAGGCTTGCCTTTTCCGAA 61.235 55.000 15.92 0.00 0.00 4.30
6579 8755 1.671054 CGAGGCTTGCCTTTTCCGA 60.671 57.895 15.92 0.00 0.00 4.55
6580 8756 1.966451 ACGAGGCTTGCCTTTTCCG 60.966 57.895 15.92 15.78 0.00 4.30
6581 8757 1.581447 CACGAGGCTTGCCTTTTCC 59.419 57.895 15.92 1.92 0.00 3.13
6582 8758 1.081175 GCACGAGGCTTGCCTTTTC 60.081 57.895 15.92 2.57 40.25 2.29
6583 8759 3.042560 GCACGAGGCTTGCCTTTT 58.957 55.556 15.92 2.97 40.25 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.