Multiple sequence alignment - TraesCS2A01G293800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G293800 chr2A 100.000 3167 0 0 1 3167 505080873 505077707 0.000000e+00 5849.0
1 TraesCS2A01G293800 chr2A 94.354 1842 58 29 563 2377 505208555 505210377 0.000000e+00 2784.0
2 TraesCS2A01G293800 chr2D 91.362 2813 162 38 388 3167 373654256 373651492 0.000000e+00 3773.0
3 TraesCS2A01G293800 chr2D 93.660 1940 81 18 571 2486 373750175 373752096 0.000000e+00 2863.0
4 TraesCS2A01G293800 chr2D 83.172 517 60 11 2495 2990 50040885 50040375 6.230000e-122 448.0
5 TraesCS2A01G293800 chr2D 81.543 363 30 20 1 340 373674524 373674176 6.740000e-67 265.0
6 TraesCS2A01G293800 chr2D 95.833 144 6 0 2495 2638 609889993 609889850 1.900000e-57 233.0
7 TraesCS2A01G293800 chr2D 83.262 233 24 1 2495 2712 373651053 373651285 1.930000e-47 200.0
8 TraesCS2A01G293800 chr2D 84.615 130 6 5 388 507 373750014 373750139 2.000000e-22 117.0
9 TraesCS2A01G293800 chr2D 94.286 70 4 0 2972 3041 641372897 641372966 1.200000e-19 108.0
10 TraesCS2A01G293800 chr2B 91.269 2096 98 41 388 2450 443148951 443146908 0.000000e+00 2778.0
11 TraesCS2A01G293800 chr2B 91.477 2018 96 38 388 2377 443223074 443225043 0.000000e+00 2704.0
12 TraesCS2A01G293800 chr2B 78.365 208 28 11 149 340 443154667 443154461 5.550000e-23 119.0
13 TraesCS2A01G293800 chr2B 100.000 29 0 0 2678 2706 7495458 7495430 2.000000e-03 54.7
14 TraesCS2A01G293800 chr6B 80.455 527 77 10 2489 2991 5067099 5067623 2.310000e-101 379.0
15 TraesCS2A01G293800 chr6B 80.000 500 74 10 2489 2964 2795209 2795706 2.340000e-91 346.0
16 TraesCS2A01G293800 chr6B 82.875 327 52 4 2669 2991 566639773 566639447 1.110000e-74 291.0
17 TraesCS2A01G293800 chr6D 79.208 505 71 22 2493 2989 162298089 162297611 1.420000e-83 320.0
18 TraesCS2A01G293800 chr6D 81.620 321 38 7 2495 2796 446509690 446510008 2.440000e-61 246.0
19 TraesCS2A01G293800 chr3D 75.090 554 123 12 1412 1956 566081016 566081563 8.770000e-61 244.0
20 TraesCS2A01G293800 chr3D 86.792 106 12 2 3020 3124 442982270 442982166 2.000000e-22 117.0
21 TraesCS2A01G293800 chr3D 88.421 95 8 3 3020 3112 517743035 517743128 9.290000e-21 111.0
22 TraesCS2A01G293800 chr3A 74.776 559 118 18 1411 1956 701218937 701218389 2.460000e-56 230.0
23 TraesCS2A01G293800 chr3B 74.686 557 120 17 1412 1956 755806067 755806614 8.840000e-56 228.0
24 TraesCS2A01G293800 chr1A 83.190 232 25 5 2495 2712 539779479 539779248 1.930000e-47 200.0
25 TraesCS2A01G293800 chr1A 89.524 105 11 0 3020 3124 544296963 544296859 1.980000e-27 134.0
26 TraesCS2A01G293800 chr6A 89.320 103 9 2 3020 3121 54505215 54505316 9.220000e-26 128.0
27 TraesCS2A01G293800 chr6A 84.762 105 16 0 3020 3124 511420439 511420335 4.320000e-19 106.0
28 TraesCS2A01G293800 chr7D 88.350 103 10 2 3020 3121 92243793 92243894 4.290000e-24 122.0
29 TraesCS2A01G293800 chr7D 87.379 103 10 3 3020 3121 559111365 559111465 7.180000e-22 115.0
30 TraesCS2A01G293800 chr7A 87.736 106 11 2 3020 3124 447287541 447287437 4.290000e-24 122.0
31 TraesCS2A01G293800 chr4D 86.792 106 12 2 3020 3124 26527157 26527053 2.000000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G293800 chr2A 505077707 505080873 3166 True 5849 5849 100.0000 1 3167 1 chr2A.!!$R1 3166
1 TraesCS2A01G293800 chr2A 505208555 505210377 1822 False 2784 2784 94.3540 563 2377 1 chr2A.!!$F1 1814
2 TraesCS2A01G293800 chr2D 373651492 373654256 2764 True 3773 3773 91.3620 388 3167 1 chr2D.!!$R2 2779
3 TraesCS2A01G293800 chr2D 373750014 373752096 2082 False 1490 2863 89.1375 388 2486 2 chr2D.!!$F3 2098
4 TraesCS2A01G293800 chr2D 50040375 50040885 510 True 448 448 83.1720 2495 2990 1 chr2D.!!$R1 495
5 TraesCS2A01G293800 chr2B 443146908 443148951 2043 True 2778 2778 91.2690 388 2450 1 chr2B.!!$R2 2062
6 TraesCS2A01G293800 chr2B 443223074 443225043 1969 False 2704 2704 91.4770 388 2377 1 chr2B.!!$F1 1989
7 TraesCS2A01G293800 chr6B 5067099 5067623 524 False 379 379 80.4550 2489 2991 1 chr6B.!!$F2 502
8 TraesCS2A01G293800 chr3D 566081016 566081563 547 False 244 244 75.0900 1412 1956 1 chr3D.!!$F2 544
9 TraesCS2A01G293800 chr3A 701218389 701218937 548 True 230 230 74.7760 1411 1956 1 chr3A.!!$R1 545
10 TraesCS2A01G293800 chr3B 755806067 755806614 547 False 228 228 74.6860 1412 1956 1 chr3B.!!$F1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 377 0.035317 AGCTTCATCCAACTGTGCGA 59.965 50.0 0.0 0.0 0.0 5.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2167 2231 0.459899 AATCAGCTCGCGATACCACA 59.54 50.0 10.36 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 5.462034 TTTTTCCGACTTGCAAAACATTG 57.538 34.783 0.00 0.00 0.00 2.82
37 38 3.791973 TTCCGACTTGCAAAACATTGT 57.208 38.095 0.00 0.00 0.00 2.71
38 39 4.902443 TTCCGACTTGCAAAACATTGTA 57.098 36.364 0.00 0.00 0.00 2.41
39 40 4.902443 TCCGACTTGCAAAACATTGTAA 57.098 36.364 0.00 0.00 0.00 2.41
40 41 4.602995 TCCGACTTGCAAAACATTGTAAC 58.397 39.130 0.00 0.00 0.00 2.50
41 42 4.336993 TCCGACTTGCAAAACATTGTAACT 59.663 37.500 0.00 0.00 0.00 2.24
42 43 5.527951 TCCGACTTGCAAAACATTGTAACTA 59.472 36.000 0.00 0.00 0.00 2.24
43 44 6.038382 TCCGACTTGCAAAACATTGTAACTAA 59.962 34.615 0.00 0.00 0.00 2.24
44 45 6.861055 CCGACTTGCAAAACATTGTAACTAAT 59.139 34.615 0.00 0.00 0.00 1.73
45 46 7.148983 CCGACTTGCAAAACATTGTAACTAATG 60.149 37.037 0.00 0.00 42.38 1.90
46 47 7.406799 ACTTGCAAAACATTGTAACTAATGC 57.593 32.000 0.00 0.00 40.80 3.56
47 48 7.209475 ACTTGCAAAACATTGTAACTAATGCT 58.791 30.769 0.00 0.00 40.80 3.79
48 49 7.169645 ACTTGCAAAACATTGTAACTAATGCTG 59.830 33.333 0.00 0.00 40.80 4.41
49 50 6.511416 TGCAAAACATTGTAACTAATGCTGT 58.489 32.000 0.00 0.00 40.80 4.40
50 51 6.420306 TGCAAAACATTGTAACTAATGCTGTG 59.580 34.615 0.00 0.00 40.80 3.66
51 52 6.420604 GCAAAACATTGTAACTAATGCTGTGT 59.579 34.615 0.00 0.00 40.80 3.72
52 53 7.042791 GCAAAACATTGTAACTAATGCTGTGTT 60.043 33.333 0.00 0.00 40.80 3.32
53 54 9.457110 CAAAACATTGTAACTAATGCTGTGTTA 57.543 29.630 0.00 0.00 40.80 2.41
56 57 9.624697 AACATTGTAACTAATGCTGTGTTAATG 57.375 29.630 0.00 0.00 40.80 1.90
57 58 8.243426 ACATTGTAACTAATGCTGTGTTAATGG 58.757 33.333 0.00 0.00 40.80 3.16
58 59 6.189677 TGTAACTAATGCTGTGTTAATGGC 57.810 37.500 0.00 0.00 0.00 4.40
59 60 5.707764 TGTAACTAATGCTGTGTTAATGGCA 59.292 36.000 0.00 0.00 39.06 4.92
60 61 5.720371 AACTAATGCTGTGTTAATGGCAA 57.280 34.783 0.00 0.00 38.21 4.52
61 62 5.920193 ACTAATGCTGTGTTAATGGCAAT 57.080 34.783 0.00 0.00 38.21 3.56
62 63 5.653507 ACTAATGCTGTGTTAATGGCAATG 58.346 37.500 0.00 0.00 38.21 2.82
63 64 4.540359 AATGCTGTGTTAATGGCAATGT 57.460 36.364 0.00 0.00 38.21 2.71
64 65 3.574284 TGCTGTGTTAATGGCAATGTC 57.426 42.857 0.00 0.00 0.00 3.06
65 66 2.889678 TGCTGTGTTAATGGCAATGTCA 59.110 40.909 0.00 0.00 0.00 3.58
66 67 3.510753 TGCTGTGTTAATGGCAATGTCAT 59.489 39.130 0.00 0.00 0.00 3.06
67 68 4.107622 GCTGTGTTAATGGCAATGTCATC 58.892 43.478 0.00 0.00 0.00 2.92
68 69 4.675510 CTGTGTTAATGGCAATGTCATCC 58.324 43.478 0.00 0.00 0.00 3.51
69 70 4.085009 TGTGTTAATGGCAATGTCATCCA 58.915 39.130 0.00 0.00 0.00 3.41
70 71 4.082300 TGTGTTAATGGCAATGTCATCCAC 60.082 41.667 0.00 9.18 31.94 4.02
71 72 4.158394 GTGTTAATGGCAATGTCATCCACT 59.842 41.667 0.00 0.00 31.94 4.00
72 73 4.398988 TGTTAATGGCAATGTCATCCACTC 59.601 41.667 0.00 0.00 31.94 3.51
73 74 2.812836 ATGGCAATGTCATCCACTCA 57.187 45.000 0.00 0.00 31.94 3.41
74 75 2.812836 TGGCAATGTCATCCACTCAT 57.187 45.000 0.00 0.00 0.00 2.90
75 76 3.090210 TGGCAATGTCATCCACTCATT 57.910 42.857 0.00 0.00 32.93 2.57
76 77 3.433343 TGGCAATGTCATCCACTCATTT 58.567 40.909 0.00 0.00 30.74 2.32
77 78 3.444742 TGGCAATGTCATCCACTCATTTC 59.555 43.478 0.00 0.00 30.74 2.17
78 79 3.698040 GGCAATGTCATCCACTCATTTCT 59.302 43.478 0.00 0.00 30.74 2.52
79 80 4.159135 GGCAATGTCATCCACTCATTTCTT 59.841 41.667 0.00 0.00 30.74 2.52
80 81 5.100259 GCAATGTCATCCACTCATTTCTTG 58.900 41.667 0.00 0.00 30.74 3.02
81 82 5.647589 CAATGTCATCCACTCATTTCTTGG 58.352 41.667 0.00 0.00 30.74 3.61
82 83 4.371624 TGTCATCCACTCATTTCTTGGT 57.628 40.909 0.00 0.00 0.00 3.67
83 84 4.728772 TGTCATCCACTCATTTCTTGGTT 58.271 39.130 0.00 0.00 0.00 3.67
84 85 5.139727 TGTCATCCACTCATTTCTTGGTTT 58.860 37.500 0.00 0.00 0.00 3.27
85 86 5.009911 TGTCATCCACTCATTTCTTGGTTTG 59.990 40.000 0.00 0.00 0.00 2.93
86 87 4.523943 TCATCCACTCATTTCTTGGTTTGG 59.476 41.667 0.00 0.00 0.00 3.28
87 88 3.909732 TCCACTCATTTCTTGGTTTGGT 58.090 40.909 0.00 0.00 0.00 3.67
88 89 3.636300 TCCACTCATTTCTTGGTTTGGTG 59.364 43.478 0.00 0.00 0.00 4.17
89 90 3.384467 CCACTCATTTCTTGGTTTGGTGT 59.616 43.478 0.00 0.00 0.00 4.16
90 91 4.141959 CCACTCATTTCTTGGTTTGGTGTT 60.142 41.667 0.00 0.00 0.00 3.32
91 92 5.418676 CACTCATTTCTTGGTTTGGTGTTT 58.581 37.500 0.00 0.00 0.00 2.83
92 93 5.519927 CACTCATTTCTTGGTTTGGTGTTTC 59.480 40.000 0.00 0.00 0.00 2.78
93 94 5.422012 ACTCATTTCTTGGTTTGGTGTTTCT 59.578 36.000 0.00 0.00 0.00 2.52
94 95 6.605594 ACTCATTTCTTGGTTTGGTGTTTCTA 59.394 34.615 0.00 0.00 0.00 2.10
95 96 6.801575 TCATTTCTTGGTTTGGTGTTTCTAC 58.198 36.000 0.00 0.00 0.00 2.59
96 97 6.605594 TCATTTCTTGGTTTGGTGTTTCTACT 59.394 34.615 0.00 0.00 0.00 2.57
97 98 6.844097 TTTCTTGGTTTGGTGTTTCTACTT 57.156 33.333 0.00 0.00 0.00 2.24
98 99 6.445357 TTCTTGGTTTGGTGTTTCTACTTC 57.555 37.500 0.00 0.00 0.00 3.01
99 100 4.885325 TCTTGGTTTGGTGTTTCTACTTCC 59.115 41.667 0.00 0.00 0.00 3.46
100 101 4.237976 TGGTTTGGTGTTTCTACTTCCA 57.762 40.909 0.00 0.00 0.00 3.53
101 102 4.601084 TGGTTTGGTGTTTCTACTTCCAA 58.399 39.130 0.00 0.00 37.27 3.53
102 103 5.017490 TGGTTTGGTGTTTCTACTTCCAAA 58.983 37.500 0.00 0.00 41.59 3.28
103 104 5.126384 TGGTTTGGTGTTTCTACTTCCAAAG 59.874 40.000 7.74 0.00 42.87 2.77
104 105 4.911514 TTGGTGTTTCTACTTCCAAAGC 57.088 40.909 0.00 0.00 36.67 3.51
105 106 3.892284 TGGTGTTTCTACTTCCAAAGCA 58.108 40.909 0.00 0.00 0.00 3.91
106 107 4.274147 TGGTGTTTCTACTTCCAAAGCAA 58.726 39.130 0.00 0.00 0.00 3.91
107 108 4.097286 TGGTGTTTCTACTTCCAAAGCAAC 59.903 41.667 0.00 0.00 0.00 4.17
108 109 4.338400 GGTGTTTCTACTTCCAAAGCAACT 59.662 41.667 0.00 0.00 0.00 3.16
109 110 5.529800 GGTGTTTCTACTTCCAAAGCAACTA 59.470 40.000 0.00 0.00 0.00 2.24
110 111 6.427974 GTGTTTCTACTTCCAAAGCAACTAC 58.572 40.000 0.00 0.00 0.00 2.73
111 112 6.260271 GTGTTTCTACTTCCAAAGCAACTACT 59.740 38.462 0.00 0.00 0.00 2.57
112 113 6.260050 TGTTTCTACTTCCAAAGCAACTACTG 59.740 38.462 0.00 0.00 0.00 2.74
113 114 5.546621 TCTACTTCCAAAGCAACTACTGT 57.453 39.130 0.00 0.00 0.00 3.55
114 115 5.297547 TCTACTTCCAAAGCAACTACTGTG 58.702 41.667 0.00 0.00 0.00 3.66
115 116 2.618709 ACTTCCAAAGCAACTACTGTGC 59.381 45.455 0.00 0.00 0.00 4.57
116 117 2.638480 TCCAAAGCAACTACTGTGCT 57.362 45.000 0.00 0.00 41.08 4.40
117 118 2.221169 TCCAAAGCAACTACTGTGCTG 58.779 47.619 0.00 0.00 39.06 4.41
118 119 1.949525 CCAAAGCAACTACTGTGCTGT 59.050 47.619 0.00 0.00 39.06 4.40
119 120 2.287188 CCAAAGCAACTACTGTGCTGTG 60.287 50.000 9.21 9.21 42.02 3.66
120 121 2.332063 AAGCAACTACTGTGCTGTGT 57.668 45.000 0.00 0.00 39.06 3.72
121 122 2.332063 AGCAACTACTGTGCTGTGTT 57.668 45.000 0.00 0.00 37.53 3.32
122 123 2.643551 AGCAACTACTGTGCTGTGTTT 58.356 42.857 0.00 0.00 37.53 2.83
123 124 2.355756 AGCAACTACTGTGCTGTGTTTG 59.644 45.455 0.00 0.00 37.53 2.93
124 125 2.719798 CAACTACTGTGCTGTGTTTGC 58.280 47.619 0.00 0.00 0.00 3.68
125 126 2.332063 ACTACTGTGCTGTGTTTGCT 57.668 45.000 0.00 0.00 0.00 3.91
126 127 3.469008 ACTACTGTGCTGTGTTTGCTA 57.531 42.857 0.00 0.00 0.00 3.49
127 128 3.804036 ACTACTGTGCTGTGTTTGCTAA 58.196 40.909 0.00 0.00 0.00 3.09
128 129 3.560068 ACTACTGTGCTGTGTTTGCTAAC 59.440 43.478 3.93 3.93 34.75 2.34
129 130 2.364632 ACTGTGCTGTGTTTGCTAACA 58.635 42.857 9.74 9.74 41.82 2.41
130 131 2.355756 ACTGTGCTGTGTTTGCTAACAG 59.644 45.455 14.10 8.80 44.53 3.16
131 132 2.355756 CTGTGCTGTGTTTGCTAACAGT 59.644 45.455 14.10 0.00 44.53 3.55
132 133 2.097304 TGTGCTGTGTTTGCTAACAGTG 59.903 45.455 14.10 10.62 44.53 3.66
133 134 1.675483 TGCTGTGTTTGCTAACAGTGG 59.325 47.619 14.10 8.34 44.53 4.00
134 135 1.676006 GCTGTGTTTGCTAACAGTGGT 59.324 47.619 14.10 0.00 44.53 4.16
135 136 2.099098 GCTGTGTTTGCTAACAGTGGTT 59.901 45.455 14.10 0.00 44.53 3.67
136 137 3.792124 GCTGTGTTTGCTAACAGTGGTTC 60.792 47.826 14.10 2.39 44.53 3.62
137 138 2.353269 TGTGTTTGCTAACAGTGGTTCG 59.647 45.455 14.10 0.00 44.53 3.95
138 139 1.332375 TGTTTGCTAACAGTGGTTCGC 59.668 47.619 9.74 0.00 43.75 4.70
139 140 0.948678 TTTGCTAACAGTGGTTCGCC 59.051 50.000 0.00 0.00 43.06 5.54
140 141 0.179043 TTGCTAACAGTGGTTCGCCA 60.179 50.000 0.00 0.00 43.06 5.69
148 149 2.191908 TGGTTCGCCACAGCTGTT 59.808 55.556 18.94 0.00 43.56 3.16
149 150 2.186160 TGGTTCGCCACAGCTGTTG 61.186 57.895 18.94 15.89 43.56 3.33
150 151 2.186826 GGTTCGCCACAGCTGTTGT 61.187 57.895 18.94 0.00 41.94 3.32
151 152 0.882927 GGTTCGCCACAGCTGTTGTA 60.883 55.000 18.94 3.74 38.16 2.41
152 153 0.941542 GTTCGCCACAGCTGTTGTAA 59.058 50.000 18.94 9.96 38.16 2.41
153 154 1.332375 GTTCGCCACAGCTGTTGTAAA 59.668 47.619 18.94 9.61 38.16 2.01
154 155 5.912259 GGTTCGCCACAGCTGTTGTAAAC 62.912 52.174 18.94 19.62 41.89 2.01
171 172 8.347729 GTTGTAAACCTTGAACTTACCATTTG 57.652 34.615 0.00 0.00 42.21 2.32
172 173 7.883391 TGTAAACCTTGAACTTACCATTTGA 57.117 32.000 0.00 0.00 0.00 2.69
173 174 8.294954 TGTAAACCTTGAACTTACCATTTGAA 57.705 30.769 0.00 0.00 0.00 2.69
174 175 8.919145 TGTAAACCTTGAACTTACCATTTGAAT 58.081 29.630 0.00 0.00 0.00 2.57
175 176 9.758651 GTAAACCTTGAACTTACCATTTGAATT 57.241 29.630 0.00 0.00 0.00 2.17
177 178 9.758651 AAACCTTGAACTTACCATTTGAATTAC 57.241 29.630 0.00 0.00 0.00 1.89
178 179 7.892609 ACCTTGAACTTACCATTTGAATTACC 58.107 34.615 0.00 0.00 0.00 2.85
179 180 7.507616 ACCTTGAACTTACCATTTGAATTACCA 59.492 33.333 0.00 0.00 0.00 3.25
180 181 8.531146 CCTTGAACTTACCATTTGAATTACCAT 58.469 33.333 0.00 0.00 0.00 3.55
181 182 9.573133 CTTGAACTTACCATTTGAATTACCATC 57.427 33.333 0.00 0.00 0.00 3.51
182 183 7.757526 TGAACTTACCATTTGAATTACCATCG 58.242 34.615 0.00 0.00 0.00 3.84
183 184 7.608376 TGAACTTACCATTTGAATTACCATCGA 59.392 33.333 0.00 0.00 0.00 3.59
184 185 7.931578 ACTTACCATTTGAATTACCATCGAA 57.068 32.000 0.00 0.00 0.00 3.71
185 186 8.343168 ACTTACCATTTGAATTACCATCGAAA 57.657 30.769 0.00 0.00 0.00 3.46
186 187 8.966868 ACTTACCATTTGAATTACCATCGAAAT 58.033 29.630 0.00 0.00 0.00 2.17
187 188 9.236691 CTTACCATTTGAATTACCATCGAAATG 57.763 33.333 0.00 0.00 32.85 2.32
188 189 7.403312 ACCATTTGAATTACCATCGAAATGA 57.597 32.000 0.00 0.00 34.25 2.57
189 190 8.010733 ACCATTTGAATTACCATCGAAATGAT 57.989 30.769 0.00 0.00 38.01 2.45
201 202 5.582439 ATCGAAATGATGATACGCAACTC 57.418 39.130 0.00 0.00 35.45 3.01
202 203 4.682787 TCGAAATGATGATACGCAACTCT 58.317 39.130 0.00 0.00 0.00 3.24
203 204 5.109210 TCGAAATGATGATACGCAACTCTT 58.891 37.500 0.00 0.00 0.00 2.85
204 205 5.232202 TCGAAATGATGATACGCAACTCTTC 59.768 40.000 0.00 0.00 0.00 2.87
205 206 5.557136 CGAAATGATGATACGCAACTCTTCC 60.557 44.000 0.00 0.00 0.00 3.46
206 207 3.179443 TGATGATACGCAACTCTTCCC 57.821 47.619 0.00 0.00 0.00 3.97
207 208 2.158957 TGATGATACGCAACTCTTCCCC 60.159 50.000 0.00 0.00 0.00 4.81
208 209 1.568504 TGATACGCAACTCTTCCCCT 58.431 50.000 0.00 0.00 0.00 4.79
209 210 1.480954 TGATACGCAACTCTTCCCCTC 59.519 52.381 0.00 0.00 0.00 4.30
210 211 1.757699 GATACGCAACTCTTCCCCTCT 59.242 52.381 0.00 0.00 0.00 3.69
211 212 1.183549 TACGCAACTCTTCCCCTCTC 58.816 55.000 0.00 0.00 0.00 3.20
212 213 1.219393 CGCAACTCTTCCCCTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
213 214 1.261238 CGCAACTCTTCCCCTCTCCT 61.261 60.000 0.00 0.00 0.00 3.69
214 215 0.251634 GCAACTCTTCCCCTCTCCTG 59.748 60.000 0.00 0.00 0.00 3.86
215 216 0.908198 CAACTCTTCCCCTCTCCTGG 59.092 60.000 0.00 0.00 0.00 4.45
216 217 0.912006 AACTCTTCCCCTCTCCTGGC 60.912 60.000 0.00 0.00 0.00 4.85
217 218 1.002792 CTCTTCCCCTCTCCTGGCT 59.997 63.158 0.00 0.00 0.00 4.75
218 219 1.002274 TCTTCCCCTCTCCTGGCTC 59.998 63.158 0.00 0.00 0.00 4.70
219 220 1.002792 CTTCCCCTCTCCTGGCTCT 59.997 63.158 0.00 0.00 0.00 4.09
220 221 0.620121 CTTCCCCTCTCCTGGCTCTT 60.620 60.000 0.00 0.00 0.00 2.85
221 222 0.911525 TTCCCCTCTCCTGGCTCTTG 60.912 60.000 0.00 0.00 0.00 3.02
222 223 2.588989 CCCTCTCCTGGCTCTTGC 59.411 66.667 0.00 0.00 38.76 4.01
223 224 2.186384 CCTCTCCTGGCTCTTGCG 59.814 66.667 0.00 0.00 40.82 4.85
224 225 2.511145 CTCTCCTGGCTCTTGCGC 60.511 66.667 0.00 0.00 40.82 6.09
225 226 3.306595 CTCTCCTGGCTCTTGCGCA 62.307 63.158 5.66 5.66 40.82 6.09
226 227 3.123620 CTCCTGGCTCTTGCGCAC 61.124 66.667 11.12 0.00 40.82 5.34
227 228 3.889134 CTCCTGGCTCTTGCGCACA 62.889 63.158 11.12 2.89 40.82 4.57
228 229 2.749044 CCTGGCTCTTGCGCACAT 60.749 61.111 11.12 0.00 40.82 3.21
229 230 1.450134 CCTGGCTCTTGCGCACATA 60.450 57.895 11.12 0.00 40.82 2.29
230 231 1.709147 CCTGGCTCTTGCGCACATAC 61.709 60.000 11.12 0.00 40.82 2.39
231 232 1.003959 TGGCTCTTGCGCACATACA 60.004 52.632 11.12 2.79 40.82 2.29
232 233 1.298157 TGGCTCTTGCGCACATACAC 61.298 55.000 11.12 0.00 40.82 2.90
233 234 1.059369 GCTCTTGCGCACATACACG 59.941 57.895 11.12 0.00 0.00 4.49
234 235 1.709760 CTCTTGCGCACATACACGG 59.290 57.895 11.12 0.00 0.00 4.94
235 236 0.735978 CTCTTGCGCACATACACGGA 60.736 55.000 11.12 0.00 0.00 4.69
236 237 1.011968 TCTTGCGCACATACACGGAC 61.012 55.000 11.12 0.00 0.00 4.79
237 238 1.288419 CTTGCGCACATACACGGACA 61.288 55.000 11.12 0.00 0.00 4.02
238 239 1.288419 TTGCGCACATACACGGACAG 61.288 55.000 11.12 0.00 0.00 3.51
239 240 1.736645 GCGCACATACACGGACAGT 60.737 57.895 0.30 0.00 0.00 3.55
240 241 0.457166 GCGCACATACACGGACAGTA 60.457 55.000 0.30 0.00 0.00 2.74
241 242 1.801395 GCGCACATACACGGACAGTAT 60.801 52.381 0.30 0.00 32.62 2.12
248 249 4.693283 CATACACGGACAGTATGGATTGT 58.307 43.478 0.00 0.00 43.10 2.71
249 250 3.695830 ACACGGACAGTATGGATTGTT 57.304 42.857 0.00 0.00 43.62 2.83
250 251 4.015872 ACACGGACAGTATGGATTGTTT 57.984 40.909 0.00 0.00 43.62 2.83
251 252 4.394729 ACACGGACAGTATGGATTGTTTT 58.605 39.130 0.00 0.00 43.62 2.43
252 253 4.825085 ACACGGACAGTATGGATTGTTTTT 59.175 37.500 0.00 0.00 43.62 1.94
253 254 5.153513 CACGGACAGTATGGATTGTTTTTG 58.846 41.667 0.00 0.00 43.62 2.44
254 255 4.825085 ACGGACAGTATGGATTGTTTTTGT 59.175 37.500 0.00 0.00 43.62 2.83
255 256 5.300792 ACGGACAGTATGGATTGTTTTTGTT 59.699 36.000 0.00 0.00 43.62 2.83
256 257 6.487331 ACGGACAGTATGGATTGTTTTTGTTA 59.513 34.615 0.00 0.00 43.62 2.41
257 258 7.175990 ACGGACAGTATGGATTGTTTTTGTTAT 59.824 33.333 0.00 0.00 43.62 1.89
258 259 7.696453 CGGACAGTATGGATTGTTTTTGTTATC 59.304 37.037 0.00 0.00 43.62 1.75
259 260 7.696453 GGACAGTATGGATTGTTTTTGTTATCG 59.304 37.037 0.00 0.00 43.62 2.92
260 261 7.535139 ACAGTATGGATTGTTTTTGTTATCGG 58.465 34.615 0.00 0.00 43.62 4.18
261 262 7.175990 ACAGTATGGATTGTTTTTGTTATCGGT 59.824 33.333 0.00 0.00 43.62 4.69
262 263 7.484641 CAGTATGGATTGTTTTTGTTATCGGTG 59.515 37.037 0.00 0.00 0.00 4.94
263 264 5.127693 TGGATTGTTTTTGTTATCGGTGG 57.872 39.130 0.00 0.00 0.00 4.61
264 265 4.827835 TGGATTGTTTTTGTTATCGGTGGA 59.172 37.500 0.00 0.00 0.00 4.02
265 266 5.048364 TGGATTGTTTTTGTTATCGGTGGAG 60.048 40.000 0.00 0.00 0.00 3.86
266 267 5.048294 GGATTGTTTTTGTTATCGGTGGAGT 60.048 40.000 0.00 0.00 0.00 3.85
267 268 6.149807 GGATTGTTTTTGTTATCGGTGGAGTA 59.850 38.462 0.00 0.00 0.00 2.59
268 269 6.939132 TTGTTTTTGTTATCGGTGGAGTAA 57.061 33.333 0.00 0.00 0.00 2.24
269 270 6.939132 TGTTTTTGTTATCGGTGGAGTAAA 57.061 33.333 0.00 0.00 0.00 2.01
270 271 7.513371 TGTTTTTGTTATCGGTGGAGTAAAT 57.487 32.000 0.00 0.00 0.00 1.40
271 272 7.942990 TGTTTTTGTTATCGGTGGAGTAAATT 58.057 30.769 0.00 0.00 0.00 1.82
272 273 7.863375 TGTTTTTGTTATCGGTGGAGTAAATTG 59.137 33.333 0.00 0.00 0.00 2.32
273 274 6.503589 TTTGTTATCGGTGGAGTAAATTGG 57.496 37.500 0.00 0.00 0.00 3.16
274 275 3.942748 TGTTATCGGTGGAGTAAATTGGC 59.057 43.478 0.00 0.00 0.00 4.52
275 276 2.052782 ATCGGTGGAGTAAATTGGCC 57.947 50.000 0.00 0.00 0.00 5.36
276 277 0.391927 TCGGTGGAGTAAATTGGCCG 60.392 55.000 0.00 0.00 39.13 6.13
277 278 0.391927 CGGTGGAGTAAATTGGCCGA 60.392 55.000 0.00 0.00 40.04 5.54
278 279 1.745827 CGGTGGAGTAAATTGGCCGAT 60.746 52.381 0.00 0.00 40.04 4.18
279 280 1.676006 GGTGGAGTAAATTGGCCGATG 59.324 52.381 6.14 0.00 0.00 3.84
280 281 1.065551 GTGGAGTAAATTGGCCGATGC 59.934 52.381 6.14 0.14 0.00 3.91
281 282 1.340502 TGGAGTAAATTGGCCGATGCA 60.341 47.619 6.14 0.00 40.13 3.96
282 283 1.065551 GGAGTAAATTGGCCGATGCAC 59.934 52.381 6.14 7.65 40.13 4.57
283 284 2.017049 GAGTAAATTGGCCGATGCACT 58.983 47.619 16.30 16.30 40.13 4.40
284 285 2.017049 AGTAAATTGGCCGATGCACTC 58.983 47.619 6.14 0.00 40.13 3.51
285 286 1.742831 GTAAATTGGCCGATGCACTCA 59.257 47.619 6.14 0.00 40.13 3.41
286 287 1.255882 AAATTGGCCGATGCACTCAA 58.744 45.000 6.14 0.00 40.13 3.02
287 288 0.527565 AATTGGCCGATGCACTCAAC 59.472 50.000 6.14 0.00 40.13 3.18
288 289 1.315257 ATTGGCCGATGCACTCAACC 61.315 55.000 4.07 0.00 40.13 3.77
289 290 3.134127 GGCCGATGCACTCAACCC 61.134 66.667 0.00 0.00 40.13 4.11
290 291 3.499737 GCCGATGCACTCAACCCG 61.500 66.667 0.00 0.00 37.47 5.28
291 292 3.499737 CCGATGCACTCAACCCGC 61.500 66.667 0.00 0.00 0.00 6.13
292 293 2.741985 CGATGCACTCAACCCGCA 60.742 61.111 0.00 0.00 40.50 5.69
294 295 0.809636 CGATGCACTCAACCCGCATA 60.810 55.000 0.00 0.00 46.01 3.14
295 296 0.940126 GATGCACTCAACCCGCATAG 59.060 55.000 0.00 0.00 46.01 2.23
296 297 0.253044 ATGCACTCAACCCGCATAGT 59.747 50.000 0.00 0.00 44.28 2.12
297 298 0.673333 TGCACTCAACCCGCATAGTG 60.673 55.000 0.00 0.00 41.78 2.74
298 299 1.369091 GCACTCAACCCGCATAGTGG 61.369 60.000 0.00 0.00 39.75 4.00
299 300 0.036388 CACTCAACCCGCATAGTGGT 60.036 55.000 0.00 0.00 36.53 4.16
300 301 0.036388 ACTCAACCCGCATAGTGGTG 60.036 55.000 0.00 0.00 34.34 4.17
301 302 1.369091 CTCAACCCGCATAGTGGTGC 61.369 60.000 0.00 0.00 41.65 5.01
302 303 1.377202 CAACCCGCATAGTGGTGCT 60.377 57.895 0.00 0.00 42.88 4.40
303 304 1.377202 AACCCGCATAGTGGTGCTG 60.377 57.895 0.00 0.00 42.88 4.41
304 305 2.124507 AACCCGCATAGTGGTGCTGT 62.125 55.000 0.00 0.00 42.88 4.40
305 306 1.261938 ACCCGCATAGTGGTGCTGTA 61.262 55.000 0.00 0.00 42.88 2.74
306 307 0.530650 CCCGCATAGTGGTGCTGTAG 60.531 60.000 0.00 0.00 42.88 2.74
307 308 0.459899 CCGCATAGTGGTGCTGTAGA 59.540 55.000 0.00 0.00 42.88 2.59
308 309 1.134818 CCGCATAGTGGTGCTGTAGAA 60.135 52.381 0.00 0.00 42.88 2.10
309 310 2.196749 CGCATAGTGGTGCTGTAGAAG 58.803 52.381 0.00 0.00 42.88 2.85
336 337 4.982241 ATGTGTAGCATAGCAATAGGGT 57.018 40.909 0.00 0.00 35.74 4.34
337 338 4.771114 TGTGTAGCATAGCAATAGGGTT 57.229 40.909 0.00 0.00 0.00 4.11
338 339 5.110814 TGTGTAGCATAGCAATAGGGTTT 57.889 39.130 0.00 0.00 0.00 3.27
339 340 6.241882 TGTGTAGCATAGCAATAGGGTTTA 57.758 37.500 0.00 0.00 0.00 2.01
340 341 6.654959 TGTGTAGCATAGCAATAGGGTTTAA 58.345 36.000 0.00 0.00 0.00 1.52
341 342 7.287061 TGTGTAGCATAGCAATAGGGTTTAAT 58.713 34.615 0.00 0.00 0.00 1.40
342 343 8.433599 TGTGTAGCATAGCAATAGGGTTTAATA 58.566 33.333 0.00 0.00 0.00 0.98
343 344 9.449719 GTGTAGCATAGCAATAGGGTTTAATAT 57.550 33.333 0.00 0.00 0.00 1.28
346 347 8.940397 AGCATAGCAATAGGGTTTAATATTGT 57.060 30.769 0.00 0.70 40.14 2.71
347 348 8.796475 AGCATAGCAATAGGGTTTAATATTGTG 58.204 33.333 0.00 2.05 40.14 3.33
348 349 8.028938 GCATAGCAATAGGGTTTAATATTGTGG 58.971 37.037 0.00 0.06 40.14 4.17
349 350 9.295825 CATAGCAATAGGGTTTAATATTGTGGA 57.704 33.333 0.00 0.00 40.14 4.02
350 351 9.875708 ATAGCAATAGGGTTTAATATTGTGGAA 57.124 29.630 0.00 0.00 40.14 3.53
351 352 8.782137 AGCAATAGGGTTTAATATTGTGGAAT 57.218 30.769 0.00 0.00 40.14 3.01
352 353 9.875708 AGCAATAGGGTTTAATATTGTGGAATA 57.124 29.630 0.00 0.00 40.14 1.75
356 357 9.821240 ATAGGGTTTAATATTGTGGAATATGCA 57.179 29.630 0.00 0.00 35.34 3.96
357 358 8.546083 AGGGTTTAATATTGTGGAATATGCAA 57.454 30.769 0.00 0.00 35.34 4.08
358 359 8.641541 AGGGTTTAATATTGTGGAATATGCAAG 58.358 33.333 0.00 0.00 35.34 4.01
359 360 7.384932 GGGTTTAATATTGTGGAATATGCAAGC 59.615 37.037 0.00 0.00 35.34 4.01
360 361 8.143835 GGTTTAATATTGTGGAATATGCAAGCT 58.856 33.333 0.00 0.00 35.34 3.74
361 362 9.533253 GTTTAATATTGTGGAATATGCAAGCTT 57.467 29.630 0.00 0.00 35.34 3.74
362 363 9.748708 TTTAATATTGTGGAATATGCAAGCTTC 57.251 29.630 0.00 0.00 35.34 3.86
363 364 6.964807 ATATTGTGGAATATGCAAGCTTCA 57.035 33.333 0.00 0.00 34.09 3.02
364 365 5.864418 ATTGTGGAATATGCAAGCTTCAT 57.136 34.783 13.51 13.51 0.00 2.57
365 366 4.906065 TGTGGAATATGCAAGCTTCATC 57.094 40.909 12.69 0.00 0.00 2.92
366 367 3.633525 TGTGGAATATGCAAGCTTCATCC 59.366 43.478 12.69 10.52 0.00 3.51
367 368 3.633525 GTGGAATATGCAAGCTTCATCCA 59.366 43.478 12.69 12.36 0.00 3.41
368 369 4.098349 GTGGAATATGCAAGCTTCATCCAA 59.902 41.667 15.35 3.40 0.00 3.53
369 370 4.098349 TGGAATATGCAAGCTTCATCCAAC 59.902 41.667 12.69 5.98 0.00 3.77
370 371 4.340381 GGAATATGCAAGCTTCATCCAACT 59.660 41.667 12.69 0.00 0.00 3.16
371 372 4.913335 ATATGCAAGCTTCATCCAACTG 57.087 40.909 12.69 0.00 0.00 3.16
372 373 1.985473 TGCAAGCTTCATCCAACTGT 58.015 45.000 0.00 0.00 0.00 3.55
373 374 1.610038 TGCAAGCTTCATCCAACTGTG 59.390 47.619 0.00 0.00 0.00 3.66
374 375 1.668047 GCAAGCTTCATCCAACTGTGC 60.668 52.381 0.00 0.00 0.00 4.57
375 376 0.877071 AAGCTTCATCCAACTGTGCG 59.123 50.000 0.00 0.00 0.00 5.34
376 377 0.035317 AGCTTCATCCAACTGTGCGA 59.965 50.000 0.00 0.00 0.00 5.10
377 378 1.089920 GCTTCATCCAACTGTGCGAT 58.910 50.000 0.00 0.00 0.00 4.58
378 379 1.470098 GCTTCATCCAACTGTGCGATT 59.530 47.619 0.00 0.00 0.00 3.34
379 380 2.677836 GCTTCATCCAACTGTGCGATTA 59.322 45.455 0.00 0.00 0.00 1.75
380 381 3.126858 GCTTCATCCAACTGTGCGATTAA 59.873 43.478 0.00 0.00 0.00 1.40
381 382 4.201950 GCTTCATCCAACTGTGCGATTAAT 60.202 41.667 0.00 0.00 0.00 1.40
382 383 5.007626 GCTTCATCCAACTGTGCGATTAATA 59.992 40.000 0.00 0.00 0.00 0.98
383 384 6.293626 GCTTCATCCAACTGTGCGATTAATAT 60.294 38.462 0.00 0.00 0.00 1.28
384 385 6.544038 TCATCCAACTGTGCGATTAATATG 57.456 37.500 0.00 0.00 0.00 1.78
385 386 5.469760 TCATCCAACTGTGCGATTAATATGG 59.530 40.000 0.00 0.00 0.00 2.74
386 387 4.776349 TCCAACTGTGCGATTAATATGGT 58.224 39.130 0.00 0.00 0.00 3.55
398 399 6.403418 GCGATTAATATGGTCTAGAGCGTAGT 60.403 42.308 24.00 23.51 34.29 2.73
399 400 7.181418 CGATTAATATGGTCTAGAGCGTAGTC 58.819 42.308 23.13 17.35 34.29 2.59
487 499 1.073284 TGTTCCTCTAAGGCGCCTTTT 59.927 47.619 43.93 26.18 37.47 2.27
504 516 4.706962 GCCTTTTCCCTGAAGATTGTATGT 59.293 41.667 0.00 0.00 0.00 2.29
518 530 6.143915 AGATTGTATGTACCCTACTCATGGT 58.856 40.000 0.00 0.00 38.69 3.55
519 531 5.864418 TTGTATGTACCCTACTCATGGTC 57.136 43.478 0.00 0.00 36.04 4.02
520 532 4.220724 TGTATGTACCCTACTCATGGTCC 58.779 47.826 0.00 0.00 36.04 4.46
521 533 3.708236 ATGTACCCTACTCATGGTCCT 57.292 47.619 0.00 0.00 36.04 3.85
522 534 3.028094 TGTACCCTACTCATGGTCCTC 57.972 52.381 0.00 0.00 36.04 3.71
524 536 2.950990 ACCCTACTCATGGTCCTCTT 57.049 50.000 0.00 0.00 0.00 2.85
525 537 2.753247 ACCCTACTCATGGTCCTCTTC 58.247 52.381 0.00 0.00 0.00 2.87
527 539 3.246167 ACCCTACTCATGGTCCTCTTCTT 60.246 47.826 0.00 0.00 0.00 2.52
529 541 4.026744 CCTACTCATGGTCCTCTTCTTGA 58.973 47.826 0.00 0.00 0.00 3.02
530 542 4.653341 CCTACTCATGGTCCTCTTCTTGAT 59.347 45.833 0.00 0.00 0.00 2.57
531 543 5.130145 CCTACTCATGGTCCTCTTCTTGATT 59.870 44.000 0.00 0.00 0.00 2.57
535 547 6.214412 ACTCATGGTCCTCTTCTTGATTACTT 59.786 38.462 0.00 0.00 0.00 2.24
536 548 6.644347 TCATGGTCCTCTTCTTGATTACTTC 58.356 40.000 0.00 0.00 0.00 3.01
537 549 5.422214 TGGTCCTCTTCTTGATTACTTCC 57.578 43.478 0.00 0.00 0.00 3.46
538 550 4.844085 TGGTCCTCTTCTTGATTACTTCCA 59.156 41.667 0.00 0.00 0.00 3.53
540 552 5.877564 GGTCCTCTTCTTGATTACTTCCAAG 59.122 44.000 0.00 0.00 40.68 3.61
544 556 6.091441 CCTCTTCTTGATTACTTCCAAGTTCG 59.909 42.308 0.00 0.00 40.32 3.95
545 557 5.408604 TCTTCTTGATTACTTCCAAGTTCGC 59.591 40.000 0.00 0.00 40.32 4.70
549 561 5.353394 TGATTACTTCCAAGTTCGCCTAT 57.647 39.130 0.00 0.00 40.37 2.57
550 562 6.474140 TGATTACTTCCAAGTTCGCCTATA 57.526 37.500 0.00 0.00 40.37 1.31
551 563 7.062749 TGATTACTTCCAAGTTCGCCTATAT 57.937 36.000 0.00 0.00 40.37 0.86
552 564 8.185506 TGATTACTTCCAAGTTCGCCTATATA 57.814 34.615 0.00 0.00 40.37 0.86
553 565 8.812972 TGATTACTTCCAAGTTCGCCTATATAT 58.187 33.333 0.00 0.00 40.37 0.86
558 570 8.258708 ACTTCCAAGTTCGCCTATATATAATCC 58.741 37.037 0.00 0.00 35.21 3.01
559 571 7.973048 TCCAAGTTCGCCTATATATAATCCT 57.027 36.000 0.00 0.00 0.00 3.24
560 572 7.782049 TCCAAGTTCGCCTATATATAATCCTG 58.218 38.462 0.00 0.00 0.00 3.86
561 573 6.480320 CCAAGTTCGCCTATATATAATCCTGC 59.520 42.308 0.00 0.00 0.00 4.85
562 574 6.791867 AGTTCGCCTATATATAATCCTGCA 57.208 37.500 0.00 0.00 0.00 4.41
563 575 6.574350 AGTTCGCCTATATATAATCCTGCAC 58.426 40.000 0.00 0.00 0.00 4.57
564 576 6.154534 AGTTCGCCTATATATAATCCTGCACA 59.845 38.462 0.00 0.00 0.00 4.57
565 577 6.731292 TCGCCTATATATAATCCTGCACAT 57.269 37.500 0.00 0.00 0.00 3.21
566 578 7.833285 TCGCCTATATATAATCCTGCACATA 57.167 36.000 0.00 0.00 0.00 2.29
567 579 8.422577 TCGCCTATATATAATCCTGCACATAT 57.577 34.615 0.00 0.00 0.00 1.78
568 580 9.528489 TCGCCTATATATAATCCTGCACATATA 57.472 33.333 0.00 0.00 0.00 0.86
569 581 9.794685 CGCCTATATATAATCCTGCACATATAG 57.205 37.037 0.00 0.00 32.46 1.31
627 639 8.839310 TCTGAATCTTGGTTTCTTTCTCTAAG 57.161 34.615 0.00 0.00 35.04 2.18
628 640 8.651389 TCTGAATCTTGGTTTCTTTCTCTAAGA 58.349 33.333 0.00 0.00 41.11 2.10
654 666 6.241207 TGAGAAGAAAATTTTGTCCTAGCG 57.759 37.500 8.47 0.00 0.00 4.26
843 882 1.644786 CTTGCCGGGACTAAAAGCCG 61.645 60.000 2.18 0.00 0.00 5.52
932 975 2.013563 GCACCATCACACCATCACGAT 61.014 52.381 0.00 0.00 0.00 3.73
933 976 1.935873 CACCATCACACCATCACGATC 59.064 52.381 0.00 0.00 0.00 3.69
934 977 1.211743 CCATCACACCATCACGATCG 58.788 55.000 14.88 14.88 0.00 3.69
935 978 1.202405 CCATCACACCATCACGATCGA 60.202 52.381 24.34 0.00 0.00 3.59
967 1011 0.510359 GCTTCACTCAACTCGCAGTG 59.490 55.000 0.00 0.00 41.32 3.66
1529 1584 2.393768 CGCACTTCATCGGCAAGCT 61.394 57.895 0.00 0.00 0.00 3.74
2194 2261 0.854853 CGCGAGCTGATTTTGCTTCG 60.855 55.000 0.00 0.00 41.30 3.79
2248 2329 1.142778 GCTCGCTGCTGCTACACTAC 61.143 60.000 14.03 0.00 38.95 2.73
2249 2330 0.171231 CTCGCTGCTGCTACACTACA 59.829 55.000 14.03 0.00 36.97 2.74
2250 2331 0.817654 TCGCTGCTGCTACACTACAT 59.182 50.000 14.03 0.00 36.97 2.29
2251 2332 1.204704 TCGCTGCTGCTACACTACATT 59.795 47.619 14.03 0.00 36.97 2.71
2252 2333 2.425668 TCGCTGCTGCTACACTACATTA 59.574 45.455 14.03 0.00 36.97 1.90
2253 2334 3.068165 TCGCTGCTGCTACACTACATTAT 59.932 43.478 14.03 0.00 36.97 1.28
2254 2335 3.426859 CGCTGCTGCTACACTACATTATC 59.573 47.826 14.03 0.00 36.97 1.75
2255 2336 3.426859 GCTGCTGCTACACTACATTATCG 59.573 47.826 8.53 0.00 36.03 2.92
2256 2337 3.977427 TGCTGCTACACTACATTATCGG 58.023 45.455 0.00 0.00 0.00 4.18
2257 2338 3.383505 TGCTGCTACACTACATTATCGGT 59.616 43.478 0.00 0.00 0.00 4.69
2258 2339 4.581409 TGCTGCTACACTACATTATCGGTA 59.419 41.667 0.00 0.00 0.00 4.02
2283 2369 7.217200 AGTAGCTCCGCATTTCAGAATAAATA 58.783 34.615 0.00 0.00 0.00 1.40
2325 2416 5.570206 GTCGTTGTGTGTTAGTCAATCGATA 59.430 40.000 0.00 0.00 32.49 2.92
2368 2465 2.048597 CAGGCGTTGCTCGGTGTA 60.049 61.111 4.36 0.00 40.26 2.90
2369 2466 1.666553 CAGGCGTTGCTCGGTGTAA 60.667 57.895 4.36 0.00 40.26 2.41
2458 2555 8.614469 TTTCATGTTACATGTGTGAGATACAA 57.386 30.769 22.58 5.19 41.89 2.41
2529 2629 7.412853 ACTACCACAATTTGTGTTAAGGTTT 57.587 32.000 24.01 6.44 46.45 3.27
2630 2730 0.456482 TGCTTTGCAATTGATCGCGG 60.456 50.000 10.34 0.00 34.76 6.46
2643 2758 3.713288 TGATCGCGGTTATGACCTAAAG 58.287 45.455 6.13 0.00 44.20 1.85
2667 2782 6.767524 AAACCATCTGTTTGACTGTTTACA 57.232 33.333 0.00 0.00 45.38 2.41
2674 2789 5.883115 TCTGTTTGACTGTTTACATTGACCA 59.117 36.000 0.00 0.00 0.00 4.02
2691 2806 0.323629 CCATTACCTGACGTGTGGGT 59.676 55.000 0.00 0.04 37.16 4.51
2920 3072 4.662961 CGGTGGAGCAGCACGACA 62.663 66.667 7.26 0.00 0.00 4.35
2947 3099 2.697761 GCTCGCCGACTACAGGTCA 61.698 63.158 0.00 0.00 44.70 4.02
3056 3208 2.887568 GCGGAGACAGCGACCATG 60.888 66.667 0.00 0.00 0.00 3.66
3057 3209 2.887568 CGGAGACAGCGACCATGC 60.888 66.667 0.00 0.00 0.00 4.06
3058 3210 2.512515 GGAGACAGCGACCATGCC 60.513 66.667 0.00 0.00 34.65 4.40
3059 3211 2.512515 GAGACAGCGACCATGCCC 60.513 66.667 0.00 0.00 34.65 5.36
3060 3212 4.457496 AGACAGCGACCATGCCCG 62.457 66.667 0.00 0.00 34.65 6.13
3128 3280 4.388499 GCAAAGGAGGCGGTCGGA 62.388 66.667 0.00 0.00 0.00 4.55
3129 3281 2.584608 CAAAGGAGGCGGTCGGAT 59.415 61.111 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.932200 ACAATGTTTTGCAAGTCGGAAAAA 59.068 33.333 0.00 0.00 45.17 1.94
15 16 4.499183 ACAATGTTTTGCAAGTCGGAAAA 58.501 34.783 0.00 0.00 41.99 2.29
16 17 4.116747 ACAATGTTTTGCAAGTCGGAAA 57.883 36.364 0.00 0.00 36.22 3.13
17 18 3.791973 ACAATGTTTTGCAAGTCGGAA 57.208 38.095 0.00 0.00 36.22 4.30
18 19 4.336993 AGTTACAATGTTTTGCAAGTCGGA 59.663 37.500 0.00 0.00 36.22 4.55
19 20 4.606961 AGTTACAATGTTTTGCAAGTCGG 58.393 39.130 0.00 0.00 36.22 4.79
20 21 7.617122 GCATTAGTTACAATGTTTTGCAAGTCG 60.617 37.037 0.00 0.00 38.04 4.18
21 22 7.382218 AGCATTAGTTACAATGTTTTGCAAGTC 59.618 33.333 0.00 0.00 38.04 3.01
22 23 7.169645 CAGCATTAGTTACAATGTTTTGCAAGT 59.830 33.333 0.00 0.00 38.04 3.16
23 24 7.169645 ACAGCATTAGTTACAATGTTTTGCAAG 59.830 33.333 0.00 0.00 38.04 4.01
24 25 6.983307 ACAGCATTAGTTACAATGTTTTGCAA 59.017 30.769 0.00 0.00 38.04 4.08
25 26 6.420306 CACAGCATTAGTTACAATGTTTTGCA 59.580 34.615 0.00 0.00 38.04 4.08
26 27 6.420604 ACACAGCATTAGTTACAATGTTTTGC 59.579 34.615 0.00 0.00 38.04 3.68
27 28 7.928908 ACACAGCATTAGTTACAATGTTTTG 57.071 32.000 0.00 8.21 38.04 2.44
30 31 9.624697 CATTAACACAGCATTAGTTACAATGTT 57.375 29.630 0.00 0.00 38.04 2.71
31 32 8.243426 CCATTAACACAGCATTAGTTACAATGT 58.757 33.333 0.00 0.00 38.04 2.71
32 33 7.220683 GCCATTAACACAGCATTAGTTACAATG 59.779 37.037 0.00 4.11 38.65 2.82
33 34 7.093988 TGCCATTAACACAGCATTAGTTACAAT 60.094 33.333 0.00 0.00 0.00 2.71
34 35 6.207614 TGCCATTAACACAGCATTAGTTACAA 59.792 34.615 0.00 0.00 0.00 2.41
35 36 5.707764 TGCCATTAACACAGCATTAGTTACA 59.292 36.000 0.00 0.00 0.00 2.41
36 37 6.189677 TGCCATTAACACAGCATTAGTTAC 57.810 37.500 0.00 0.00 0.00 2.50
37 38 6.825944 TTGCCATTAACACAGCATTAGTTA 57.174 33.333 0.00 0.00 34.72 2.24
38 39 5.720371 TTGCCATTAACACAGCATTAGTT 57.280 34.783 0.00 0.00 34.72 2.24
39 40 5.185635 ACATTGCCATTAACACAGCATTAGT 59.814 36.000 0.00 0.00 34.72 2.24
40 41 5.653507 ACATTGCCATTAACACAGCATTAG 58.346 37.500 0.00 0.00 34.72 1.73
41 42 5.184671 TGACATTGCCATTAACACAGCATTA 59.815 36.000 0.00 0.00 34.72 1.90
42 43 4.021280 TGACATTGCCATTAACACAGCATT 60.021 37.500 0.00 0.00 34.72 3.56
43 44 3.510753 TGACATTGCCATTAACACAGCAT 59.489 39.130 0.00 0.00 34.72 3.79
44 45 2.889678 TGACATTGCCATTAACACAGCA 59.110 40.909 0.00 0.00 0.00 4.41
45 46 3.574284 TGACATTGCCATTAACACAGC 57.426 42.857 0.00 0.00 0.00 4.40
46 47 4.158209 TGGATGACATTGCCATTAACACAG 59.842 41.667 0.00 0.00 0.00 3.66
47 48 4.082300 GTGGATGACATTGCCATTAACACA 60.082 41.667 0.00 0.00 33.66 3.72
48 49 4.158394 AGTGGATGACATTGCCATTAACAC 59.842 41.667 0.00 7.68 33.66 3.32
49 50 4.343231 AGTGGATGACATTGCCATTAACA 58.657 39.130 0.00 0.00 33.66 2.41
50 51 4.398988 TGAGTGGATGACATTGCCATTAAC 59.601 41.667 0.00 0.00 33.66 2.01
51 52 4.598022 TGAGTGGATGACATTGCCATTAA 58.402 39.130 0.00 0.00 33.66 1.40
52 53 4.233632 TGAGTGGATGACATTGCCATTA 57.766 40.909 0.00 0.00 33.66 1.90
53 54 3.090210 TGAGTGGATGACATTGCCATT 57.910 42.857 0.00 0.00 33.66 3.16
54 55 2.812836 TGAGTGGATGACATTGCCAT 57.187 45.000 0.00 0.00 33.66 4.40
55 56 2.812836 ATGAGTGGATGACATTGCCA 57.187 45.000 0.00 0.00 0.00 4.92
56 57 3.698040 AGAAATGAGTGGATGACATTGCC 59.302 43.478 0.00 0.00 35.00 4.52
57 58 4.978083 AGAAATGAGTGGATGACATTGC 57.022 40.909 0.00 0.00 35.00 3.56
58 59 5.184479 ACCAAGAAATGAGTGGATGACATTG 59.816 40.000 0.00 0.00 35.00 2.82
59 60 5.327732 ACCAAGAAATGAGTGGATGACATT 58.672 37.500 0.00 0.00 36.07 2.71
60 61 4.927049 ACCAAGAAATGAGTGGATGACAT 58.073 39.130 0.00 0.00 0.00 3.06
61 62 4.371624 ACCAAGAAATGAGTGGATGACA 57.628 40.909 0.00 0.00 0.00 3.58
62 63 5.464168 CAAACCAAGAAATGAGTGGATGAC 58.536 41.667 0.00 0.00 0.00 3.06
63 64 4.523943 CCAAACCAAGAAATGAGTGGATGA 59.476 41.667 0.00 0.00 0.00 2.92
64 65 4.281688 ACCAAACCAAGAAATGAGTGGATG 59.718 41.667 0.00 0.00 31.90 3.51
65 66 4.281688 CACCAAACCAAGAAATGAGTGGAT 59.718 41.667 0.00 0.00 31.90 3.41
66 67 3.636300 CACCAAACCAAGAAATGAGTGGA 59.364 43.478 0.00 0.00 31.90 4.02
67 68 3.384467 ACACCAAACCAAGAAATGAGTGG 59.616 43.478 0.00 0.00 33.02 4.00
68 69 4.654091 ACACCAAACCAAGAAATGAGTG 57.346 40.909 0.00 0.00 0.00 3.51
69 70 5.422012 AGAAACACCAAACCAAGAAATGAGT 59.578 36.000 0.00 0.00 0.00 3.41
70 71 5.906073 AGAAACACCAAACCAAGAAATGAG 58.094 37.500 0.00 0.00 0.00 2.90
71 72 5.930837 AGAAACACCAAACCAAGAAATGA 57.069 34.783 0.00 0.00 0.00 2.57
72 73 6.805713 AGTAGAAACACCAAACCAAGAAATG 58.194 36.000 0.00 0.00 0.00 2.32
73 74 7.417456 GGAAGTAGAAACACCAAACCAAGAAAT 60.417 37.037 0.00 0.00 0.00 2.17
74 75 6.127563 GGAAGTAGAAACACCAAACCAAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
75 76 5.358725 GGAAGTAGAAACACCAAACCAAGAA 59.641 40.000 0.00 0.00 0.00 2.52
76 77 4.885325 GGAAGTAGAAACACCAAACCAAGA 59.115 41.667 0.00 0.00 0.00 3.02
77 78 4.642885 TGGAAGTAGAAACACCAAACCAAG 59.357 41.667 0.00 0.00 33.50 3.61
78 79 4.601084 TGGAAGTAGAAACACCAAACCAA 58.399 39.130 0.00 0.00 33.50 3.67
79 80 4.237976 TGGAAGTAGAAACACCAAACCA 57.762 40.909 0.00 0.00 33.50 3.67
80 81 5.585820 TTTGGAAGTAGAAACACCAAACC 57.414 39.130 0.00 0.00 43.07 3.27
81 82 5.041287 GCTTTGGAAGTAGAAACACCAAAC 58.959 41.667 0.00 0.00 43.07 2.93
82 83 4.707448 TGCTTTGGAAGTAGAAACACCAAA 59.293 37.500 0.00 0.00 44.33 3.28
83 84 4.274147 TGCTTTGGAAGTAGAAACACCAA 58.726 39.130 0.00 0.00 40.21 3.67
84 85 3.892284 TGCTTTGGAAGTAGAAACACCA 58.108 40.909 0.00 0.00 34.22 4.17
85 86 4.338400 AGTTGCTTTGGAAGTAGAAACACC 59.662 41.667 0.00 0.00 0.00 4.16
86 87 5.500645 AGTTGCTTTGGAAGTAGAAACAC 57.499 39.130 0.00 0.00 0.00 3.32
87 88 6.260050 CAGTAGTTGCTTTGGAAGTAGAAACA 59.740 38.462 0.00 0.00 0.00 2.83
88 89 6.260271 ACAGTAGTTGCTTTGGAAGTAGAAAC 59.740 38.462 0.00 0.00 0.00 2.78
89 90 6.260050 CACAGTAGTTGCTTTGGAAGTAGAAA 59.740 38.462 0.00 0.00 0.00 2.52
90 91 5.758296 CACAGTAGTTGCTTTGGAAGTAGAA 59.242 40.000 0.00 0.00 0.00 2.10
91 92 5.297547 CACAGTAGTTGCTTTGGAAGTAGA 58.702 41.667 0.00 0.00 0.00 2.59
92 93 4.083802 GCACAGTAGTTGCTTTGGAAGTAG 60.084 45.833 0.00 0.00 0.00 2.57
93 94 3.813166 GCACAGTAGTTGCTTTGGAAGTA 59.187 43.478 0.00 0.00 0.00 2.24
94 95 2.618709 GCACAGTAGTTGCTTTGGAAGT 59.381 45.455 0.00 0.00 0.00 3.01
95 96 2.880890 AGCACAGTAGTTGCTTTGGAAG 59.119 45.455 0.00 0.00 35.02 3.46
96 97 2.618241 CAGCACAGTAGTTGCTTTGGAA 59.382 45.455 0.00 0.00 36.69 3.53
97 98 2.221169 CAGCACAGTAGTTGCTTTGGA 58.779 47.619 0.00 0.00 36.69 3.53
98 99 1.949525 ACAGCACAGTAGTTGCTTTGG 59.050 47.619 0.00 0.00 36.69 3.28
99 100 2.355756 ACACAGCACAGTAGTTGCTTTG 59.644 45.455 8.55 8.55 40.80 2.77
100 101 2.643551 ACACAGCACAGTAGTTGCTTT 58.356 42.857 0.00 0.00 36.69 3.51
101 102 2.332063 ACACAGCACAGTAGTTGCTT 57.668 45.000 0.00 0.00 36.69 3.91
102 103 2.332063 AACACAGCACAGTAGTTGCT 57.668 45.000 0.00 0.00 39.79 3.91
103 104 2.719798 CAAACACAGCACAGTAGTTGC 58.280 47.619 0.00 0.00 0.00 4.17
104 105 2.355756 AGCAAACACAGCACAGTAGTTG 59.644 45.455 0.00 0.00 0.00 3.16
105 106 2.643551 AGCAAACACAGCACAGTAGTT 58.356 42.857 0.00 0.00 0.00 2.24
106 107 2.332063 AGCAAACACAGCACAGTAGT 57.668 45.000 0.00 0.00 0.00 2.73
107 108 3.559655 TGTTAGCAAACACAGCACAGTAG 59.440 43.478 0.00 0.00 40.69 2.57
108 109 3.536570 TGTTAGCAAACACAGCACAGTA 58.463 40.909 0.00 0.00 40.69 2.74
109 110 2.355756 CTGTTAGCAAACACAGCACAGT 59.644 45.455 0.00 0.00 40.69 3.55
110 111 2.355756 ACTGTTAGCAAACACAGCACAG 59.644 45.455 0.00 0.00 43.72 3.66
111 112 2.097304 CACTGTTAGCAAACACAGCACA 59.903 45.455 0.00 0.00 43.72 4.57
112 113 2.541588 CCACTGTTAGCAAACACAGCAC 60.542 50.000 0.00 0.00 43.72 4.40
113 114 1.675483 CCACTGTTAGCAAACACAGCA 59.325 47.619 0.00 0.00 43.72 4.41
114 115 1.676006 ACCACTGTTAGCAAACACAGC 59.324 47.619 0.00 0.00 43.72 4.40
115 116 3.546020 CGAACCACTGTTAGCAAACACAG 60.546 47.826 0.00 0.00 45.15 3.66
116 117 2.353269 CGAACCACTGTTAGCAAACACA 59.647 45.455 0.00 0.00 40.69 3.72
117 118 2.981875 CGAACCACTGTTAGCAAACAC 58.018 47.619 0.00 0.00 40.69 3.32
131 132 2.186160 CAACAGCTGTGGCGAACCA 61.186 57.895 22.49 0.00 46.51 3.67
132 133 0.882927 TACAACAGCTGTGGCGAACC 60.883 55.000 22.49 0.00 44.37 3.62
133 134 0.941542 TTACAACAGCTGTGGCGAAC 59.058 50.000 22.49 0.00 44.37 3.95
134 135 1.332375 GTTTACAACAGCTGTGGCGAA 59.668 47.619 22.49 12.57 44.37 4.70
135 136 0.941542 GTTTACAACAGCTGTGGCGA 59.058 50.000 22.49 6.19 44.37 5.54
136 137 0.040425 GGTTTACAACAGCTGTGGCG 60.040 55.000 22.49 14.58 44.37 5.69
137 138 1.318576 AGGTTTACAACAGCTGTGGC 58.681 50.000 22.49 3.89 39.20 5.01
138 139 2.948979 TCAAGGTTTACAACAGCTGTGG 59.051 45.455 22.49 21.23 39.20 4.17
139 140 4.096382 AGTTCAAGGTTTACAACAGCTGTG 59.904 41.667 22.49 16.62 39.20 3.66
140 141 4.270008 AGTTCAAGGTTTACAACAGCTGT 58.730 39.130 15.25 15.25 42.47 4.40
141 142 4.900635 AGTTCAAGGTTTACAACAGCTG 57.099 40.909 13.48 13.48 0.00 4.24
142 143 5.298527 GGTAAGTTCAAGGTTTACAACAGCT 59.701 40.000 0.00 0.00 0.00 4.24
143 144 5.066764 TGGTAAGTTCAAGGTTTACAACAGC 59.933 40.000 0.00 0.00 0.00 4.40
144 145 6.687081 TGGTAAGTTCAAGGTTTACAACAG 57.313 37.500 0.00 0.00 0.00 3.16
145 146 7.648039 AATGGTAAGTTCAAGGTTTACAACA 57.352 32.000 0.00 0.00 0.00 3.33
146 147 8.192110 TCAAATGGTAAGTTCAAGGTTTACAAC 58.808 33.333 0.00 0.00 0.00 3.32
147 148 8.294954 TCAAATGGTAAGTTCAAGGTTTACAA 57.705 30.769 0.00 0.00 0.00 2.41
148 149 7.883391 TCAAATGGTAAGTTCAAGGTTTACA 57.117 32.000 0.00 0.00 0.00 2.41
149 150 9.758651 AATTCAAATGGTAAGTTCAAGGTTTAC 57.241 29.630 0.00 0.00 0.00 2.01
151 152 9.758651 GTAATTCAAATGGTAAGTTCAAGGTTT 57.241 29.630 0.00 0.00 0.00 3.27
152 153 8.364894 GGTAATTCAAATGGTAAGTTCAAGGTT 58.635 33.333 0.00 0.00 0.00 3.50
153 154 7.507616 TGGTAATTCAAATGGTAAGTTCAAGGT 59.492 33.333 0.00 0.00 0.00 3.50
154 155 7.891561 TGGTAATTCAAATGGTAAGTTCAAGG 58.108 34.615 0.00 0.00 0.00 3.61
155 156 9.573133 GATGGTAATTCAAATGGTAAGTTCAAG 57.427 33.333 0.00 0.00 0.00 3.02
156 157 8.240682 CGATGGTAATTCAAATGGTAAGTTCAA 58.759 33.333 0.00 0.00 0.00 2.69
157 158 7.608376 TCGATGGTAATTCAAATGGTAAGTTCA 59.392 33.333 0.00 0.00 0.00 3.18
158 159 7.981142 TCGATGGTAATTCAAATGGTAAGTTC 58.019 34.615 0.00 0.00 0.00 3.01
159 160 7.931578 TCGATGGTAATTCAAATGGTAAGTT 57.068 32.000 0.00 0.00 0.00 2.66
160 161 7.931578 TTCGATGGTAATTCAAATGGTAAGT 57.068 32.000 0.00 0.00 0.00 2.24
161 162 9.236691 CATTTCGATGGTAATTCAAATGGTAAG 57.763 33.333 0.00 0.00 30.77 2.34
162 163 8.961634 TCATTTCGATGGTAATTCAAATGGTAA 58.038 29.630 0.00 0.00 33.78 2.85
163 164 8.512966 TCATTTCGATGGTAATTCAAATGGTA 57.487 30.769 0.00 0.00 33.78 3.25
164 165 7.403312 TCATTTCGATGGTAATTCAAATGGT 57.597 32.000 0.00 0.00 33.78 3.55
165 166 8.289440 CATCATTTCGATGGTAATTCAAATGG 57.711 34.615 0.00 0.00 46.73 3.16
169 170 8.495148 CGTATCATCATTTCGATGGTAATTCAA 58.505 33.333 2.45 0.00 46.87 2.69
170 171 7.360017 GCGTATCATCATTTCGATGGTAATTCA 60.360 37.037 2.45 0.00 46.87 2.57
171 172 6.955963 GCGTATCATCATTTCGATGGTAATTC 59.044 38.462 2.45 0.00 46.87 2.17
172 173 6.426633 TGCGTATCATCATTTCGATGGTAATT 59.573 34.615 2.45 0.00 46.87 1.40
173 174 5.931724 TGCGTATCATCATTTCGATGGTAAT 59.068 36.000 2.45 0.00 46.87 1.89
174 175 5.293560 TGCGTATCATCATTTCGATGGTAA 58.706 37.500 2.45 0.00 46.87 2.85
179 180 5.292765 AGAGTTGCGTATCATCATTTCGAT 58.707 37.500 0.00 0.00 33.27 3.59
180 181 4.682787 AGAGTTGCGTATCATCATTTCGA 58.317 39.130 0.00 0.00 0.00 3.71
181 182 5.395325 AAGAGTTGCGTATCATCATTTCG 57.605 39.130 0.00 0.00 0.00 3.46
182 183 5.277538 GGGAAGAGTTGCGTATCATCATTTC 60.278 44.000 0.00 0.00 0.00 2.17
183 184 4.576463 GGGAAGAGTTGCGTATCATCATTT 59.424 41.667 0.00 0.00 0.00 2.32
184 185 4.130118 GGGAAGAGTTGCGTATCATCATT 58.870 43.478 0.00 0.00 0.00 2.57
185 186 3.495100 GGGGAAGAGTTGCGTATCATCAT 60.495 47.826 0.00 0.00 0.00 2.45
186 187 2.158957 GGGGAAGAGTTGCGTATCATCA 60.159 50.000 0.00 0.00 0.00 3.07
187 188 2.103263 AGGGGAAGAGTTGCGTATCATC 59.897 50.000 0.00 0.00 0.00 2.92
188 189 2.103263 GAGGGGAAGAGTTGCGTATCAT 59.897 50.000 0.00 0.00 0.00 2.45
189 190 1.480954 GAGGGGAAGAGTTGCGTATCA 59.519 52.381 0.00 0.00 0.00 2.15
190 191 1.757699 AGAGGGGAAGAGTTGCGTATC 59.242 52.381 0.00 0.00 0.00 2.24
191 192 1.757699 GAGAGGGGAAGAGTTGCGTAT 59.242 52.381 0.00 0.00 0.00 3.06
192 193 1.183549 GAGAGGGGAAGAGTTGCGTA 58.816 55.000 0.00 0.00 0.00 4.42
193 194 1.545706 GGAGAGGGGAAGAGTTGCGT 61.546 60.000 0.00 0.00 0.00 5.24
194 195 1.219393 GGAGAGGGGAAGAGTTGCG 59.781 63.158 0.00 0.00 0.00 4.85
195 196 0.251634 CAGGAGAGGGGAAGAGTTGC 59.748 60.000 0.00 0.00 0.00 4.17
196 197 0.908198 CCAGGAGAGGGGAAGAGTTG 59.092 60.000 0.00 0.00 0.00 3.16
197 198 0.912006 GCCAGGAGAGGGGAAGAGTT 60.912 60.000 0.00 0.00 0.00 3.01
198 199 1.306568 GCCAGGAGAGGGGAAGAGT 60.307 63.158 0.00 0.00 0.00 3.24
199 200 1.002792 AGCCAGGAGAGGGGAAGAG 59.997 63.158 0.00 0.00 0.00 2.85
200 201 1.002274 GAGCCAGGAGAGGGGAAGA 59.998 63.158 0.00 0.00 0.00 2.87
201 202 0.620121 AAGAGCCAGGAGAGGGGAAG 60.620 60.000 0.00 0.00 0.00 3.46
202 203 0.911525 CAAGAGCCAGGAGAGGGGAA 60.912 60.000 0.00 0.00 0.00 3.97
203 204 1.306482 CAAGAGCCAGGAGAGGGGA 60.306 63.158 0.00 0.00 0.00 4.81
204 205 3.041469 GCAAGAGCCAGGAGAGGGG 62.041 68.421 0.00 0.00 33.58 4.79
205 206 2.588989 GCAAGAGCCAGGAGAGGG 59.411 66.667 0.00 0.00 33.58 4.30
206 207 2.186384 CGCAAGAGCCAGGAGAGG 59.814 66.667 0.00 0.00 43.02 3.69
207 208 2.511145 GCGCAAGAGCCAGGAGAG 60.511 66.667 0.30 0.00 43.02 3.20
208 209 3.313524 TGCGCAAGAGCCAGGAGA 61.314 61.111 8.16 0.00 43.02 3.71
209 210 3.123620 GTGCGCAAGAGCCAGGAG 61.124 66.667 14.00 0.00 43.02 3.69
210 211 1.898330 TATGTGCGCAAGAGCCAGGA 61.898 55.000 14.00 0.00 43.02 3.86
211 212 1.450134 TATGTGCGCAAGAGCCAGG 60.450 57.895 14.00 0.00 43.02 4.45
212 213 1.020861 TGTATGTGCGCAAGAGCCAG 61.021 55.000 14.00 0.00 43.02 4.85
213 214 1.003959 TGTATGTGCGCAAGAGCCA 60.004 52.632 14.00 5.72 43.02 4.75
214 215 1.425428 GTGTATGTGCGCAAGAGCC 59.575 57.895 14.00 0.00 43.02 4.70
215 216 1.059369 CGTGTATGTGCGCAAGAGC 59.941 57.895 14.00 0.00 43.02 4.09
216 217 0.735978 TCCGTGTATGTGCGCAAGAG 60.736 55.000 14.00 0.00 43.02 2.85
217 218 1.011968 GTCCGTGTATGTGCGCAAGA 61.012 55.000 14.00 1.01 43.02 3.02
218 219 1.288419 TGTCCGTGTATGTGCGCAAG 61.288 55.000 14.00 0.00 43.44 4.01
219 220 1.288419 CTGTCCGTGTATGTGCGCAA 61.288 55.000 14.00 2.60 0.00 4.85
220 221 1.736282 CTGTCCGTGTATGTGCGCA 60.736 57.895 5.66 5.66 0.00 6.09
221 222 0.457166 TACTGTCCGTGTATGTGCGC 60.457 55.000 0.00 0.00 0.00 6.09
222 223 1.852280 CATACTGTCCGTGTATGTGCG 59.148 52.381 0.00 0.00 41.13 5.34
223 224 2.159156 TCCATACTGTCCGTGTATGTGC 60.159 50.000 11.36 0.00 43.21 4.57
224 225 3.793797 TCCATACTGTCCGTGTATGTG 57.206 47.619 11.36 5.21 43.21 3.21
225 226 4.161565 ACAATCCATACTGTCCGTGTATGT 59.838 41.667 11.36 0.00 43.21 2.29
226 227 4.693283 ACAATCCATACTGTCCGTGTATG 58.307 43.478 6.84 6.84 43.91 2.39
227 228 5.353394 AACAATCCATACTGTCCGTGTAT 57.647 39.130 0.00 0.00 0.00 2.29
228 229 4.811969 AACAATCCATACTGTCCGTGTA 57.188 40.909 0.00 0.00 0.00 2.90
229 230 3.695830 AACAATCCATACTGTCCGTGT 57.304 42.857 0.00 0.00 0.00 4.49
230 231 5.153513 CAAAAACAATCCATACTGTCCGTG 58.846 41.667 0.00 0.00 0.00 4.94
231 232 4.825085 ACAAAAACAATCCATACTGTCCGT 59.175 37.500 0.00 0.00 0.00 4.69
232 233 5.371115 ACAAAAACAATCCATACTGTCCG 57.629 39.130 0.00 0.00 0.00 4.79
233 234 7.696453 CGATAACAAAAACAATCCATACTGTCC 59.304 37.037 0.00 0.00 0.00 4.02
234 235 7.696453 CCGATAACAAAAACAATCCATACTGTC 59.304 37.037 0.00 0.00 0.00 3.51
235 236 7.175990 ACCGATAACAAAAACAATCCATACTGT 59.824 33.333 0.00 0.00 0.00 3.55
236 237 7.484641 CACCGATAACAAAAACAATCCATACTG 59.515 37.037 0.00 0.00 0.00 2.74
237 238 7.362574 CCACCGATAACAAAAACAATCCATACT 60.363 37.037 0.00 0.00 0.00 2.12
238 239 6.750039 CCACCGATAACAAAAACAATCCATAC 59.250 38.462 0.00 0.00 0.00 2.39
239 240 6.659668 TCCACCGATAACAAAAACAATCCATA 59.340 34.615 0.00 0.00 0.00 2.74
240 241 5.478679 TCCACCGATAACAAAAACAATCCAT 59.521 36.000 0.00 0.00 0.00 3.41
241 242 4.827835 TCCACCGATAACAAAAACAATCCA 59.172 37.500 0.00 0.00 0.00 3.41
242 243 5.048294 ACTCCACCGATAACAAAAACAATCC 60.048 40.000 0.00 0.00 0.00 3.01
243 244 6.009115 ACTCCACCGATAACAAAAACAATC 57.991 37.500 0.00 0.00 0.00 2.67
244 245 7.513371 TTACTCCACCGATAACAAAAACAAT 57.487 32.000 0.00 0.00 0.00 2.71
245 246 6.939132 TTACTCCACCGATAACAAAAACAA 57.061 33.333 0.00 0.00 0.00 2.83
246 247 6.939132 TTTACTCCACCGATAACAAAAACA 57.061 33.333 0.00 0.00 0.00 2.83
247 248 7.327518 CCAATTTACTCCACCGATAACAAAAAC 59.672 37.037 0.00 0.00 0.00 2.43
248 249 7.371936 CCAATTTACTCCACCGATAACAAAAA 58.628 34.615 0.00 0.00 0.00 1.94
249 250 6.570764 GCCAATTTACTCCACCGATAACAAAA 60.571 38.462 0.00 0.00 0.00 2.44
250 251 5.106078 GCCAATTTACTCCACCGATAACAAA 60.106 40.000 0.00 0.00 0.00 2.83
251 252 4.396790 GCCAATTTACTCCACCGATAACAA 59.603 41.667 0.00 0.00 0.00 2.83
252 253 3.942748 GCCAATTTACTCCACCGATAACA 59.057 43.478 0.00 0.00 0.00 2.41
253 254 3.314357 GGCCAATTTACTCCACCGATAAC 59.686 47.826 0.00 0.00 0.00 1.89
254 255 3.547746 GGCCAATTTACTCCACCGATAA 58.452 45.455 0.00 0.00 0.00 1.75
255 256 2.484065 CGGCCAATTTACTCCACCGATA 60.484 50.000 2.24 0.00 41.61 2.92
256 257 1.745827 CGGCCAATTTACTCCACCGAT 60.746 52.381 2.24 0.00 41.61 4.18
257 258 0.391927 CGGCCAATTTACTCCACCGA 60.392 55.000 2.24 0.00 41.61 4.69
258 259 0.391927 TCGGCCAATTTACTCCACCG 60.392 55.000 2.24 0.00 40.47 4.94
259 260 1.676006 CATCGGCCAATTTACTCCACC 59.324 52.381 2.24 0.00 0.00 4.61
260 261 1.065551 GCATCGGCCAATTTACTCCAC 59.934 52.381 2.24 0.00 0.00 4.02
261 262 1.340502 TGCATCGGCCAATTTACTCCA 60.341 47.619 2.24 0.00 40.13 3.86
262 263 1.065551 GTGCATCGGCCAATTTACTCC 59.934 52.381 2.24 0.00 40.13 3.85
263 264 2.017049 AGTGCATCGGCCAATTTACTC 58.983 47.619 2.24 0.00 40.13 2.59
264 265 2.017049 GAGTGCATCGGCCAATTTACT 58.983 47.619 2.24 0.39 40.13 2.24
265 266 1.742831 TGAGTGCATCGGCCAATTTAC 59.257 47.619 2.24 0.00 40.13 2.01
266 267 2.121291 TGAGTGCATCGGCCAATTTA 57.879 45.000 2.24 0.00 40.13 1.40
267 268 1.067635 GTTGAGTGCATCGGCCAATTT 60.068 47.619 2.24 0.00 40.13 1.82
268 269 0.527565 GTTGAGTGCATCGGCCAATT 59.472 50.000 2.24 0.00 40.13 2.32
269 270 1.315257 GGTTGAGTGCATCGGCCAAT 61.315 55.000 2.24 0.00 40.13 3.16
270 271 1.971167 GGTTGAGTGCATCGGCCAA 60.971 57.895 2.24 0.00 40.13 4.52
271 272 2.359850 GGTTGAGTGCATCGGCCA 60.360 61.111 2.24 0.00 40.13 5.36
272 273 3.134127 GGGTTGAGTGCATCGGCC 61.134 66.667 0.00 0.00 40.13 6.13
273 274 3.499737 CGGGTTGAGTGCATCGGC 61.500 66.667 0.00 0.00 41.68 5.54
274 275 3.499737 GCGGGTTGAGTGCATCGG 61.500 66.667 0.00 0.00 0.00 4.18
275 276 0.809636 TATGCGGGTTGAGTGCATCG 60.810 55.000 1.75 0.00 45.68 3.84
276 277 0.940126 CTATGCGGGTTGAGTGCATC 59.060 55.000 1.75 0.00 45.68 3.91
278 279 0.673333 CACTATGCGGGTTGAGTGCA 60.673 55.000 0.00 0.00 43.67 4.57
279 280 1.369091 CCACTATGCGGGTTGAGTGC 61.369 60.000 0.00 0.00 38.37 4.40
280 281 0.036388 ACCACTATGCGGGTTGAGTG 60.036 55.000 0.00 0.00 39.22 3.51
281 282 0.036388 CACCACTATGCGGGTTGAGT 60.036 55.000 0.00 0.00 34.45 3.41
282 283 1.369091 GCACCACTATGCGGGTTGAG 61.369 60.000 0.00 0.00 35.50 3.02
283 284 1.376683 GCACCACTATGCGGGTTGA 60.377 57.895 0.00 0.00 35.50 3.18
284 285 3.187058 GCACCACTATGCGGGTTG 58.813 61.111 0.00 0.00 35.50 3.77
314 315 6.433847 AACCCTATTGCTATGCTACACATA 57.566 37.500 0.00 0.00 40.38 2.29
315 316 4.982241 ACCCTATTGCTATGCTACACAT 57.018 40.909 0.00 0.00 43.18 3.21
316 317 4.771114 AACCCTATTGCTATGCTACACA 57.229 40.909 0.00 0.00 0.00 3.72
317 318 7.745620 ATTAAACCCTATTGCTATGCTACAC 57.254 36.000 0.00 0.00 0.00 2.90
321 322 8.796475 CACAATATTAAACCCTATTGCTATGCT 58.204 33.333 6.49 0.00 38.38 3.79
322 323 8.028938 CCACAATATTAAACCCTATTGCTATGC 58.971 37.037 6.49 0.00 38.38 3.14
323 324 9.295825 TCCACAATATTAAACCCTATTGCTATG 57.704 33.333 6.49 0.31 38.38 2.23
324 325 9.875708 TTCCACAATATTAAACCCTATTGCTAT 57.124 29.630 6.49 0.00 38.38 2.97
325 326 9.875708 ATTCCACAATATTAAACCCTATTGCTA 57.124 29.630 6.49 0.00 38.38 3.49
326 327 8.782137 ATTCCACAATATTAAACCCTATTGCT 57.218 30.769 6.49 0.00 38.38 3.91
330 331 9.821240 TGCATATTCCACAATATTAAACCCTAT 57.179 29.630 0.00 0.00 33.53 2.57
331 332 9.647918 TTGCATATTCCACAATATTAAACCCTA 57.352 29.630 0.00 0.00 33.53 3.53
332 333 8.546083 TTGCATATTCCACAATATTAAACCCT 57.454 30.769 0.00 0.00 33.53 4.34
333 334 7.384932 GCTTGCATATTCCACAATATTAAACCC 59.615 37.037 0.00 0.00 33.53 4.11
334 335 8.143835 AGCTTGCATATTCCACAATATTAAACC 58.856 33.333 0.00 0.00 33.53 3.27
335 336 9.533253 AAGCTTGCATATTCCACAATATTAAAC 57.467 29.630 0.00 0.00 33.53 2.01
336 337 9.748708 GAAGCTTGCATATTCCACAATATTAAA 57.251 29.630 2.10 0.00 33.53 1.52
337 338 8.911965 TGAAGCTTGCATATTCCACAATATTAA 58.088 29.630 2.10 0.00 33.53 1.40
338 339 8.462589 TGAAGCTTGCATATTCCACAATATTA 57.537 30.769 2.10 0.00 33.53 0.98
339 340 7.350744 TGAAGCTTGCATATTCCACAATATT 57.649 32.000 2.10 0.00 33.53 1.28
340 341 6.964807 TGAAGCTTGCATATTCCACAATAT 57.035 33.333 2.10 0.00 35.84 1.28
341 342 6.016024 GGATGAAGCTTGCATATTCCACAATA 60.016 38.462 2.10 0.00 0.00 1.90
342 343 5.221382 GGATGAAGCTTGCATATTCCACAAT 60.221 40.000 2.10 0.00 0.00 2.71
343 344 4.098349 GGATGAAGCTTGCATATTCCACAA 59.902 41.667 2.10 0.00 0.00 3.33
344 345 3.633525 GGATGAAGCTTGCATATTCCACA 59.366 43.478 2.10 0.00 0.00 4.17
345 346 3.633525 TGGATGAAGCTTGCATATTCCAC 59.366 43.478 2.10 0.00 0.00 4.02
346 347 3.900971 TGGATGAAGCTTGCATATTCCA 58.099 40.909 2.10 9.27 0.00 3.53
347 348 4.340381 AGTTGGATGAAGCTTGCATATTCC 59.660 41.667 2.10 6.85 0.00 3.01
348 349 5.163581 ACAGTTGGATGAAGCTTGCATATTC 60.164 40.000 2.10 0.00 0.00 1.75
349 350 4.708421 ACAGTTGGATGAAGCTTGCATATT 59.292 37.500 2.10 0.00 0.00 1.28
350 351 4.097437 CACAGTTGGATGAAGCTTGCATAT 59.903 41.667 2.10 0.00 0.00 1.78
351 352 3.441222 CACAGTTGGATGAAGCTTGCATA 59.559 43.478 2.10 0.00 0.00 3.14
352 353 2.230508 CACAGTTGGATGAAGCTTGCAT 59.769 45.455 2.10 7.42 0.00 3.96
353 354 1.610038 CACAGTTGGATGAAGCTTGCA 59.390 47.619 2.10 1.94 0.00 4.08
354 355 1.668047 GCACAGTTGGATGAAGCTTGC 60.668 52.381 2.10 0.00 0.00 4.01
355 356 1.400629 CGCACAGTTGGATGAAGCTTG 60.401 52.381 2.10 0.00 0.00 4.01
356 357 0.877071 CGCACAGTTGGATGAAGCTT 59.123 50.000 0.00 0.00 0.00 3.74
357 358 0.035317 TCGCACAGTTGGATGAAGCT 59.965 50.000 0.00 0.00 0.00 3.74
358 359 1.089920 ATCGCACAGTTGGATGAAGC 58.910 50.000 0.00 0.00 0.00 3.86
359 360 4.944962 TTAATCGCACAGTTGGATGAAG 57.055 40.909 0.00 0.00 0.00 3.02
360 361 6.017192 CCATATTAATCGCACAGTTGGATGAA 60.017 38.462 0.00 0.00 0.00 2.57
361 362 5.469760 CCATATTAATCGCACAGTTGGATGA 59.530 40.000 0.00 0.00 0.00 2.92
362 363 5.239306 ACCATATTAATCGCACAGTTGGATG 59.761 40.000 0.00 0.00 0.00 3.51
363 364 5.376625 ACCATATTAATCGCACAGTTGGAT 58.623 37.500 0.00 0.00 0.00 3.41
364 365 4.776349 ACCATATTAATCGCACAGTTGGA 58.224 39.130 0.00 0.00 0.00 3.53
365 366 4.816385 AGACCATATTAATCGCACAGTTGG 59.184 41.667 0.00 0.00 0.00 3.77
366 367 5.991328 AGACCATATTAATCGCACAGTTG 57.009 39.130 0.00 0.00 0.00 3.16
367 368 7.050970 TCTAGACCATATTAATCGCACAGTT 57.949 36.000 0.00 0.00 0.00 3.16
368 369 6.650427 TCTAGACCATATTAATCGCACAGT 57.350 37.500 0.00 0.00 0.00 3.55
369 370 5.574830 GCTCTAGACCATATTAATCGCACAG 59.425 44.000 0.00 0.00 0.00 3.66
370 371 5.470368 GCTCTAGACCATATTAATCGCACA 58.530 41.667 0.00 0.00 0.00 4.57
371 372 4.559251 CGCTCTAGACCATATTAATCGCAC 59.441 45.833 0.00 0.00 0.00 5.34
372 373 4.217767 ACGCTCTAGACCATATTAATCGCA 59.782 41.667 0.00 0.00 0.00 5.10
373 374 4.734917 ACGCTCTAGACCATATTAATCGC 58.265 43.478 0.00 0.00 0.00 4.58
374 375 7.064847 AGACTACGCTCTAGACCATATTAATCG 59.935 40.741 0.00 0.00 0.00 3.34
375 376 8.178964 CAGACTACGCTCTAGACCATATTAATC 58.821 40.741 0.00 0.00 0.00 1.75
376 377 7.121463 CCAGACTACGCTCTAGACCATATTAAT 59.879 40.741 0.00 0.00 0.00 1.40
377 378 6.430308 CCAGACTACGCTCTAGACCATATTAA 59.570 42.308 0.00 0.00 0.00 1.40
378 379 5.938710 CCAGACTACGCTCTAGACCATATTA 59.061 44.000 0.00 0.00 0.00 0.98
379 380 4.762765 CCAGACTACGCTCTAGACCATATT 59.237 45.833 0.00 0.00 0.00 1.28
380 381 4.041815 TCCAGACTACGCTCTAGACCATAT 59.958 45.833 0.00 0.00 0.00 1.78
381 382 3.390311 TCCAGACTACGCTCTAGACCATA 59.610 47.826 0.00 0.00 0.00 2.74
382 383 2.172930 TCCAGACTACGCTCTAGACCAT 59.827 50.000 0.00 0.00 0.00 3.55
383 384 1.558294 TCCAGACTACGCTCTAGACCA 59.442 52.381 0.00 0.00 0.00 4.02
384 385 2.215196 CTCCAGACTACGCTCTAGACC 58.785 57.143 0.00 0.00 0.00 3.85
385 386 1.600485 GCTCCAGACTACGCTCTAGAC 59.400 57.143 0.00 0.00 0.00 2.59
386 387 1.209747 TGCTCCAGACTACGCTCTAGA 59.790 52.381 0.00 0.00 0.00 2.43
398 399 2.158769 TGCTTCAGAAAGTTGCTCCAGA 60.159 45.455 0.00 0.00 34.79 3.86
399 400 2.224606 TGCTTCAGAAAGTTGCTCCAG 58.775 47.619 0.00 0.00 34.79 3.86
487 499 4.631234 AGGGTACATACAATCTTCAGGGA 58.369 43.478 0.00 0.00 0.00 4.20
504 516 3.532232 AGAAGAGGACCATGAGTAGGGTA 59.468 47.826 0.00 0.00 41.95 3.69
518 530 6.688073 ACTTGGAAGTAATCAAGAAGAGGA 57.312 37.500 9.63 0.00 41.94 3.71
519 531 6.091441 CGAACTTGGAAGTAATCAAGAAGAGG 59.909 42.308 9.63 0.00 41.94 3.69
520 532 6.401581 GCGAACTTGGAAGTAATCAAGAAGAG 60.402 42.308 9.63 1.06 41.94 2.85
521 533 5.408604 GCGAACTTGGAAGTAATCAAGAAGA 59.591 40.000 9.63 0.00 41.94 2.87
522 534 5.390991 GGCGAACTTGGAAGTAATCAAGAAG 60.391 44.000 9.63 0.00 41.94 2.85
524 536 4.000988 GGCGAACTTGGAAGTAATCAAGA 58.999 43.478 9.63 0.00 41.94 3.02
525 537 4.003648 AGGCGAACTTGGAAGTAATCAAG 58.996 43.478 0.00 0.00 44.14 3.02
527 539 3.695830 AGGCGAACTTGGAAGTAATCA 57.304 42.857 0.00 0.00 38.57 2.57
535 547 7.632898 GCAGGATTATATATAGGCGAACTTGGA 60.633 40.741 0.00 0.00 0.00 3.53
536 548 6.480320 GCAGGATTATATATAGGCGAACTTGG 59.520 42.308 0.00 0.00 0.00 3.61
537 549 7.010552 GTGCAGGATTATATATAGGCGAACTTG 59.989 40.741 0.00 0.00 0.00 3.16
538 550 7.042335 GTGCAGGATTATATATAGGCGAACTT 58.958 38.462 0.00 0.00 0.00 2.66
540 552 6.338146 TGTGCAGGATTATATATAGGCGAAC 58.662 40.000 0.00 0.00 0.00 3.95
553 565 8.251026 GCACTATGTACTATATGTGCAGGATTA 58.749 37.037 17.85 0.00 46.64 1.75
554 566 7.099764 GCACTATGTACTATATGTGCAGGATT 58.900 38.462 17.85 0.00 46.64 3.01
555 567 6.634805 GCACTATGTACTATATGTGCAGGAT 58.365 40.000 17.85 0.00 46.64 3.24
556 568 6.025749 GCACTATGTACTATATGTGCAGGA 57.974 41.667 17.85 0.00 46.64 3.86
564 576 9.411801 CGACAGAAATTGCACTATGTACTATAT 57.588 33.333 0.00 0.00 0.00 0.86
565 577 8.626526 TCGACAGAAATTGCACTATGTACTATA 58.373 33.333 0.00 0.00 0.00 1.31
566 578 7.435488 GTCGACAGAAATTGCACTATGTACTAT 59.565 37.037 11.55 0.00 0.00 2.12
567 579 6.750501 GTCGACAGAAATTGCACTATGTACTA 59.249 38.462 11.55 0.00 0.00 1.82
568 580 5.577164 GTCGACAGAAATTGCACTATGTACT 59.423 40.000 11.55 0.00 0.00 2.73
569 581 5.220416 GGTCGACAGAAATTGCACTATGTAC 60.220 44.000 18.91 0.00 0.00 2.90
572 584 3.684305 TGGTCGACAGAAATTGCACTATG 59.316 43.478 18.91 0.00 0.00 2.23
575 587 2.254546 TGGTCGACAGAAATTGCACT 57.745 45.000 18.91 0.00 0.00 4.40
585 597 4.773323 TCAGATATAGCATGGTCGACAG 57.227 45.455 18.91 7.70 0.00 3.51
588 600 6.393171 CAAGATTCAGATATAGCATGGTCGA 58.607 40.000 0.00 0.00 0.00 4.20
589 601 5.579904 CCAAGATTCAGATATAGCATGGTCG 59.420 44.000 0.00 0.00 0.00 4.79
627 639 9.133627 GCTAGGACAAAATTTTCTTCTCATTTC 57.866 33.333 0.00 0.00 0.00 2.17
628 640 7.809806 CGCTAGGACAAAATTTTCTTCTCATTT 59.190 33.333 0.00 0.00 0.00 2.32
631 643 5.181245 CCGCTAGGACAAAATTTTCTTCTCA 59.819 40.000 0.00 0.00 41.02 3.27
654 666 2.355010 AAGCAGAATCTACATGCCCC 57.645 50.000 0.00 0.00 40.89 5.80
843 882 3.400590 GTCGTCGGAACCACGCAC 61.401 66.667 9.61 6.73 37.18 5.34
934 977 1.224069 TGAAGCTGTTGCGAGTGCTC 61.224 55.000 0.00 0.00 45.42 4.26
935 978 1.227645 TGAAGCTGTTGCGAGTGCT 60.228 52.632 0.00 0.00 45.42 4.40
967 1011 3.547746 AGTCGGTCTCTAGGTGATCTTC 58.452 50.000 0.00 0.00 0.00 2.87
2167 2231 0.459899 AATCAGCTCGCGATACCACA 59.540 50.000 10.36 0.00 0.00 4.17
2194 2261 1.673923 GGGCACACTTACGAGGGTAAC 60.674 57.143 0.00 0.00 37.45 2.50
2283 2369 1.667830 CACGACATCACCAGCGGTT 60.668 57.895 0.00 0.00 31.02 4.44
2325 2416 0.599204 CAACGTTGCCCTACACGACT 60.599 55.000 16.51 0.00 0.00 4.18
2458 2555 2.872245 CGGATGTGGCTCAACGAAATAT 59.128 45.455 10.24 0.00 34.18 1.28
2630 2730 7.923414 ACAGATGGTTTCTTTAGGTCATAAC 57.077 36.000 0.00 0.00 29.93 1.89
2643 2758 6.791303 TGTAAACAGTCAAACAGATGGTTTC 58.209 36.000 0.00 0.00 46.61 2.78
2660 2775 5.410132 CGTCAGGTAATGGTCAATGTAAACA 59.590 40.000 0.00 0.00 0.00 2.83
2667 2782 3.334691 CACACGTCAGGTAATGGTCAAT 58.665 45.455 0.00 0.00 0.00 2.57
2674 2789 0.611714 GGACCCACACGTCAGGTAAT 59.388 55.000 0.81 0.00 34.24 1.89
2783 2901 7.900782 TCAAAAACTTTTAGGGACTCTATCG 57.099 36.000 0.00 0.00 41.75 2.92
2902 3054 4.357947 GTCGTGCTGCTCCACCGA 62.358 66.667 0.00 0.00 32.10 4.69
2937 3089 1.982938 GCCTCCCGTGACCTGTAGT 60.983 63.158 0.00 0.00 0.00 2.73
2940 3092 3.314331 CTGCCTCCCGTGACCTGT 61.314 66.667 0.00 0.00 0.00 4.00
2964 3116 3.826754 CGAGCTGCTCCACCGCTA 61.827 66.667 22.97 0.00 33.47 4.26
3113 3265 2.291043 ACATCCGACCGCCTCCTTT 61.291 57.895 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.