Multiple sequence alignment - TraesCS2A01G293500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G293500 chr2A 100.000 7130 0 0 1 7130 504551680 504544551 0.000000e+00 13167.0
1 TraesCS2A01G293500 chr2A 97.391 115 3 0 1593 1707 423426577 423426463 5.640000e-46 196.0
2 TraesCS2A01G293500 chr2A 84.444 135 20 1 6885 7019 719199373 719199240 1.610000e-26 132.0
3 TraesCS2A01G293500 chr2A 92.188 64 3 2 3607 3668 82344943 82344880 9.850000e-14 89.8
4 TraesCS2A01G293500 chr2B 95.588 2720 90 9 3654 6356 442336426 442339132 0.000000e+00 4331.0
5 TraesCS2A01G293500 chr2B 96.440 1910 48 8 1704 3596 442334489 442336395 0.000000e+00 3133.0
6 TraesCS2A01G293500 chr2B 91.239 1404 99 14 210 1597 442333092 442334487 0.000000e+00 1890.0
7 TraesCS2A01G293500 chr2B 90.291 515 40 7 6371 6882 442339120 442339627 0.000000e+00 665.0
8 TraesCS2A01G293500 chr2B 89.908 218 17 3 6918 7130 442340255 442340472 7.050000e-70 276.0
9 TraesCS2A01G293500 chr2D 95.741 1902 51 8 1704 3595 372809693 372811574 0.000000e+00 3037.0
10 TraesCS2A01G293500 chr2D 97.743 1684 29 4 3654 5330 372811960 372813641 0.000000e+00 2891.0
11 TraesCS2A01G293500 chr2D 91.280 1789 94 23 5368 7120 372813639 372815401 0.000000e+00 2383.0
12 TraesCS2A01G293500 chr2D 94.530 914 44 4 685 1597 372808783 372809691 0.000000e+00 1406.0
13 TraesCS2A01G293500 chr2D 85.072 489 46 13 210 683 372808122 372808598 2.330000e-129 473.0
14 TraesCS2A01G293500 chr2D 98.198 111 2 0 1597 1707 17960845 17960955 2.030000e-45 195.0
15 TraesCS2A01G293500 chr2D 83.444 151 22 3 6881 7030 584894729 584894581 3.470000e-28 137.0
16 TraesCS2A01G293500 chr1D 88.506 348 38 1 4289 4634 334462342 334462689 3.080000e-113 420.0
17 TraesCS2A01G293500 chr1D 86.819 349 44 1 4289 4635 334472557 334472905 8.670000e-104 388.0
18 TraesCS2A01G293500 chr1D 76.406 640 122 22 2775 3398 334471153 334471779 1.150000e-82 318.0
19 TraesCS2A01G293500 chr1D 90.000 230 21 2 4852 5080 334462803 334463031 5.410000e-76 296.0
20 TraesCS2A01G293500 chr1D 84.862 218 25 7 2775 2990 334460858 334461069 5.600000e-51 213.0
21 TraesCS2A01G293500 chr1D 77.690 381 57 13 4857 5236 334473013 334473366 2.610000e-49 207.0
22 TraesCS2A01G293500 chr1D 93.548 62 3 1 3595 3656 332955050 332955110 2.740000e-14 91.6
23 TraesCS2A01G293500 chr1B 87.644 348 40 2 4289 4634 450024673 450025019 1.110000e-107 401.0
24 TraesCS2A01G293500 chr1B 86.494 348 45 1 4289 4634 450029836 450030183 1.450000e-101 381.0
25 TraesCS2A01G293500 chr1B 78.193 642 102 23 2775 3396 450023184 450023807 6.750000e-100 375.0
26 TraesCS2A01G293500 chr1B 88.312 231 26 1 4852 5081 450025133 450025363 7.050000e-70 276.0
27 TraesCS2A01G293500 chr1B 83.111 225 27 3 4852 5076 450030295 450030508 2.030000e-45 195.0
28 TraesCS2A01G293500 chr1A 86.819 349 42 3 4289 4634 432539877 432540224 3.120000e-103 387.0
29 TraesCS2A01G293500 chr1A 85.526 228 23 3 4852 5079 432540336 432540553 5.560000e-56 230.0
30 TraesCS2A01G293500 chr1A 83.482 224 28 7 2730 2950 432533208 432533425 4.360000e-47 200.0
31 TraesCS2A01G293500 chr3B 84.727 275 34 4 6504 6771 242203934 242204207 1.180000e-67 268.0
32 TraesCS2A01G293500 chr3B 84.932 146 21 1 6887 7032 267203836 267203980 5.760000e-31 147.0
33 TraesCS2A01G293500 chr3B 84.762 105 14 2 4862 4966 419767281 419767383 3.520000e-18 104.0
34 TraesCS2A01G293500 chr3B 97.619 42 1 0 4137 4178 279668468 279668509 9.920000e-09 73.1
35 TraesCS2A01G293500 chr3A 81.879 298 46 7 6481 6771 204882865 204883161 1.990000e-60 244.0
36 TraesCS2A01G293500 chr3A 84.354 147 20 3 6887 7032 240396351 240396207 2.680000e-29 141.0
37 TraesCS2A01G293500 chr3A 92.958 71 3 2 3593 3662 727071328 727071259 1.270000e-17 102.0
38 TraesCS2A01G293500 chr3A 100.000 50 0 0 3607 3656 172679481 172679530 7.620000e-15 93.5
39 TraesCS2A01G293500 chr3A 97.619 42 1 0 4137 4178 251339686 251339727 9.920000e-09 73.1
40 TraesCS2A01G293500 chr3D 84.190 253 32 6 6521 6765 166513388 166513640 9.240000e-59 239.0
41 TraesCS2A01G293500 chr3D 87.671 146 17 1 6887 7032 186605963 186606107 1.230000e-37 169.0
42 TraesCS2A01G293500 chr3D 76.761 284 37 17 4865 5146 301440157 301439901 1.610000e-26 132.0
43 TraesCS2A01G293500 chr3D 96.721 61 2 0 3595 3655 26287721 26287661 1.270000e-17 102.0
44 TraesCS2A01G293500 chr3D 97.619 42 1 0 4137 4178 196949487 196949528 9.920000e-09 73.1
45 TraesCS2A01G293500 chrUn 98.198 111 2 0 1597 1707 390054441 390054551 2.030000e-45 195.0
46 TraesCS2A01G293500 chr7D 98.198 111 2 0 1597 1707 382007787 382007897 2.030000e-45 195.0
47 TraesCS2A01G293500 chr7B 98.198 111 2 0 1597 1707 743107060 743107170 2.030000e-45 195.0
48 TraesCS2A01G293500 chr6B 98.198 111 2 0 1597 1707 525684572 525684462 2.030000e-45 195.0
49 TraesCS2A01G293500 chr6B 98.198 111 2 0 1597 1707 695106278 695106168 2.030000e-45 195.0
50 TraesCS2A01G293500 chr4D 98.198 111 2 0 1597 1707 123374165 123374055 2.030000e-45 195.0
51 TraesCS2A01G293500 chr4A 98.198 111 2 0 1597 1707 552102569 552102679 2.030000e-45 195.0
52 TraesCS2A01G293500 chr4A 96.923 65 1 1 3595 3658 743919048 743919112 2.720000e-19 108.0
53 TraesCS2A01G293500 chr4A 93.651 63 2 2 3607 3668 714207204 714207265 7.620000e-15 93.5
54 TraesCS2A01G293500 chr5A 75.405 370 63 16 6695 7040 502596510 502596145 3.440000e-33 154.0
55 TraesCS2A01G293500 chr5A 90.000 50 5 0 4137 4186 546517839 546517790 1.660000e-06 65.8
56 TraesCS2A01G293500 chr6D 82.993 147 20 4 6886 7030 59630977 59631120 2.090000e-25 128.0
57 TraesCS2A01G293500 chr6D 94.828 58 3 0 3607 3664 413410077 413410134 2.740000e-14 91.6
58 TraesCS2A01G293500 chr5D 91.045 67 5 1 3595 3660 71900257 71900191 9.850000e-14 89.8
59 TraesCS2A01G293500 chr5D 92.000 50 4 0 4137 4186 431153798 431153749 3.570000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G293500 chr2A 504544551 504551680 7129 True 13167.000000 13167 100.000000 1 7130 1 chr2A.!!$R3 7129
1 TraesCS2A01G293500 chr2B 442333092 442340472 7380 False 2059.000000 4331 92.693200 210 7130 5 chr2B.!!$F1 6920
2 TraesCS2A01G293500 chr2D 372808122 372815401 7279 False 2038.000000 3037 92.873200 210 7120 5 chr2D.!!$F2 6910
3 TraesCS2A01G293500 chr1D 334460858 334463031 2173 False 309.666667 420 87.789333 2775 5080 3 chr1D.!!$F2 2305
4 TraesCS2A01G293500 chr1D 334471153 334473366 2213 False 304.333333 388 80.305000 2775 5236 3 chr1D.!!$F3 2461
5 TraesCS2A01G293500 chr1B 450023184 450025363 2179 False 350.666667 401 84.716333 2775 5081 3 chr1B.!!$F1 2306
6 TraesCS2A01G293500 chr1B 450029836 450030508 672 False 288.000000 381 84.802500 4289 5076 2 chr1B.!!$F2 787
7 TraesCS2A01G293500 chr1A 432539877 432540553 676 False 308.500000 387 86.172500 4289 5079 2 chr1A.!!$F2 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.042581 TCCAGGCCAGGACATGTCTA 59.957 55.000 24.50 0.00 31.23 2.59 F
194 195 0.108615 GTCTAGCAGCGTGGACACAT 60.109 55.000 3.12 0.00 0.00 3.21 F
195 196 0.173481 TCTAGCAGCGTGGACACATC 59.827 55.000 3.12 0.00 0.00 3.06 F
359 363 0.238289 CAAATGCCAGACGTCCACAC 59.762 55.000 13.01 0.00 0.00 3.82 F
1656 1857 0.319555 TTTCTGGTCGTTCCGCTCTG 60.320 55.000 0.00 0.00 39.52 3.35 F
1670 1871 0.952280 GCTCTGTCGGATCGATGGTA 59.048 55.000 0.54 0.00 38.42 3.25 F
1671 1872 1.068885 GCTCTGTCGGATCGATGGTAG 60.069 57.143 0.54 0.00 38.42 3.18 F
2062 2264 1.153289 ATCATCGACCAGGCACAGC 60.153 57.895 0.00 0.00 0.00 4.40 F
3109 3359 1.180907 TTCCAGTTGTGCTTGCACAA 58.819 45.000 29.84 29.84 42.10 3.33 F
4482 5362 1.143684 AGCAAAGCTTCTTGACCCTCA 59.856 47.619 0.00 0.00 33.89 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1178 1379 0.035820 GGTTTCTACATCGGCCACCA 60.036 55.000 2.24 0.00 0.00 4.17 R
1651 1852 0.952280 TACCATCGATCCGACAGAGC 59.048 55.000 0.00 0.00 39.18 4.09 R
1911 2112 1.188219 AGTGCCTGTGACTGATCGGT 61.188 55.000 6.97 6.97 0.00 4.69 R
2226 2428 6.732531 TCTTTCTCAACACAGCATTATCTG 57.267 37.500 0.00 0.00 39.86 2.90 R
3589 3929 1.001633 TGAAACGGAGGGAGTACTTGC 59.998 52.381 0.00 0.00 0.00 4.01 R
3590 3930 3.396260 TTGAAACGGAGGGAGTACTTG 57.604 47.619 0.00 0.00 0.00 3.16 R
3627 4138 4.096382 CCCTCCATTCCAAATTACTTGTCG 59.904 45.833 0.00 0.00 32.65 4.35 R
3891 4583 1.035139 CCACCCTTATGCAATCAGGC 58.965 55.000 0.00 0.00 36.36 4.85 R
4623 5503 0.386476 AGTGTGTGCCAAACATGCTG 59.614 50.000 0.00 0.00 41.97 4.41 R
6273 7165 0.685097 AGACCAGCTGCCGAACTTTA 59.315 50.000 8.66 0.00 0.00 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.762289 AAGTAGAAGGATTAGTGCCAGG 57.238 45.455 0.00 0.00 0.00 4.45
24 25 2.436173 AGTAGAAGGATTAGTGCCAGGC 59.564 50.000 3.66 3.66 0.00 4.85
25 26 1.589414 AGAAGGATTAGTGCCAGGCT 58.411 50.000 14.15 0.00 0.00 4.58
26 27 1.211457 AGAAGGATTAGTGCCAGGCTG 59.789 52.381 14.15 7.75 0.00 4.85
27 28 0.995024 AAGGATTAGTGCCAGGCTGT 59.005 50.000 14.15 1.74 0.00 4.40
28 29 0.995024 AGGATTAGTGCCAGGCTGTT 59.005 50.000 14.15 0.25 0.00 3.16
29 30 1.098050 GGATTAGTGCCAGGCTGTTG 58.902 55.000 14.15 0.00 0.00 3.33
30 31 1.614317 GGATTAGTGCCAGGCTGTTGT 60.614 52.381 14.15 0.00 0.00 3.32
31 32 2.162681 GATTAGTGCCAGGCTGTTGTT 58.837 47.619 14.15 0.00 0.00 2.83
32 33 1.317613 TTAGTGCCAGGCTGTTGTTG 58.682 50.000 14.15 0.00 0.00 3.33
33 34 1.172180 TAGTGCCAGGCTGTTGTTGC 61.172 55.000 14.15 9.69 0.00 4.17
41 42 3.591835 CTGTTGTTGCCCGCGGTT 61.592 61.111 26.12 0.00 0.00 4.44
42 43 3.536498 CTGTTGTTGCCCGCGGTTC 62.536 63.158 26.12 16.03 0.00 3.62
43 44 3.587933 GTTGTTGCCCGCGGTTCA 61.588 61.111 26.12 18.66 0.00 3.18
44 45 3.283684 TTGTTGCCCGCGGTTCAG 61.284 61.111 26.12 9.88 0.00 3.02
55 56 3.110178 GGTTCAGGCGACCGAACG 61.110 66.667 11.17 0.00 37.66 3.95
56 57 3.110178 GTTCAGGCGACCGAACGG 61.110 66.667 11.83 11.83 42.03 4.44
57 58 4.367023 TTCAGGCGACCGAACGGG 62.367 66.667 17.44 1.91 43.62 5.28
82 83 2.947448 CCTGGCAGGCTAATTTTCAC 57.053 50.000 22.68 0.00 0.00 3.18
83 84 1.133025 CCTGGCAGGCTAATTTTCACG 59.867 52.381 22.68 0.00 0.00 4.35
84 85 0.525761 TGGCAGGCTAATTTTCACGC 59.474 50.000 0.00 0.00 0.00 5.34
85 86 0.179137 GGCAGGCTAATTTTCACGCC 60.179 55.000 0.00 0.00 42.79 5.68
89 90 2.832672 GGCTAATTTTCACGCCTGAG 57.167 50.000 0.00 0.00 39.42 3.35
90 91 1.202188 GGCTAATTTTCACGCCTGAGC 60.202 52.381 0.00 0.00 39.42 4.26
101 102 3.473647 CCTGAGCGATCCAGGCCA 61.474 66.667 5.01 0.00 43.93 5.36
102 103 2.108566 CTGAGCGATCCAGGCCAG 59.891 66.667 5.01 0.00 0.00 4.85
103 104 3.457625 CTGAGCGATCCAGGCCAGG 62.458 68.421 8.15 8.15 0.00 4.45
104 105 3.157252 GAGCGATCCAGGCCAGGA 61.157 66.667 20.62 20.62 43.01 3.86
105 106 3.453070 GAGCGATCCAGGCCAGGAC 62.453 68.421 20.78 12.33 41.30 3.85
106 107 3.785859 GCGATCCAGGCCAGGACA 61.786 66.667 20.78 0.00 41.30 4.02
107 108 3.112205 GCGATCCAGGCCAGGACAT 62.112 63.158 20.78 4.15 41.30 3.06
108 109 1.227764 CGATCCAGGCCAGGACATG 60.228 63.158 20.78 8.38 41.30 3.21
109 110 1.918253 GATCCAGGCCAGGACATGT 59.082 57.895 20.78 2.83 41.30 3.21
110 111 0.179034 GATCCAGGCCAGGACATGTC 60.179 60.000 20.78 17.91 41.30 3.06
111 112 0.622738 ATCCAGGCCAGGACATGTCT 60.623 55.000 20.78 8.73 41.30 3.41
112 113 0.042581 TCCAGGCCAGGACATGTCTA 59.957 55.000 24.50 0.00 31.23 2.59
113 114 0.911769 CCAGGCCAGGACATGTCTAA 59.088 55.000 24.50 0.00 0.00 2.10
114 115 1.281867 CCAGGCCAGGACATGTCTAAA 59.718 52.381 24.50 0.00 0.00 1.85
115 116 2.290896 CCAGGCCAGGACATGTCTAAAA 60.291 50.000 24.50 0.00 0.00 1.52
116 117 2.749621 CAGGCCAGGACATGTCTAAAAC 59.250 50.000 24.50 12.79 0.00 2.43
117 118 2.644798 AGGCCAGGACATGTCTAAAACT 59.355 45.455 24.50 14.65 0.00 2.66
118 119 3.074538 AGGCCAGGACATGTCTAAAACTT 59.925 43.478 24.50 5.66 0.00 2.66
119 120 3.826729 GGCCAGGACATGTCTAAAACTTT 59.173 43.478 24.50 0.00 0.00 2.66
120 121 4.082733 GGCCAGGACATGTCTAAAACTTTC 60.083 45.833 24.50 5.40 0.00 2.62
121 122 4.518970 GCCAGGACATGTCTAAAACTTTCA 59.481 41.667 24.50 0.00 0.00 2.69
122 123 5.335191 GCCAGGACATGTCTAAAACTTTCAG 60.335 44.000 24.50 2.55 0.00 3.02
123 124 5.182001 CCAGGACATGTCTAAAACTTTCAGG 59.818 44.000 24.50 7.74 0.00 3.86
124 125 5.997746 CAGGACATGTCTAAAACTTTCAGGA 59.002 40.000 24.50 0.00 0.00 3.86
125 126 5.998363 AGGACATGTCTAAAACTTTCAGGAC 59.002 40.000 24.50 2.92 0.00 3.85
126 127 5.998363 GGACATGTCTAAAACTTTCAGGACT 59.002 40.000 24.50 0.00 0.00 3.85
127 128 6.147985 GGACATGTCTAAAACTTTCAGGACTC 59.852 42.308 24.50 0.00 0.00 3.36
128 129 5.998363 ACATGTCTAAAACTTTCAGGACTCC 59.002 40.000 0.00 0.00 0.00 3.85
129 130 5.623956 TGTCTAAAACTTTCAGGACTCCA 57.376 39.130 0.00 0.00 0.00 3.86
130 131 6.187727 TGTCTAAAACTTTCAGGACTCCAT 57.812 37.500 0.00 0.00 0.00 3.41
131 132 6.231211 TGTCTAAAACTTTCAGGACTCCATC 58.769 40.000 0.00 0.00 0.00 3.51
143 144 3.904136 GACTCCATCCAAACAAGTGTG 57.096 47.619 0.00 0.00 0.00 3.82
144 145 3.476552 GACTCCATCCAAACAAGTGTGA 58.523 45.455 0.00 0.00 0.00 3.58
145 146 3.480470 ACTCCATCCAAACAAGTGTGAG 58.520 45.455 0.00 0.00 0.00 3.51
146 147 3.136443 ACTCCATCCAAACAAGTGTGAGA 59.864 43.478 0.00 0.00 0.00 3.27
147 148 3.476552 TCCATCCAAACAAGTGTGAGAC 58.523 45.455 0.00 0.00 0.00 3.36
148 149 3.118075 TCCATCCAAACAAGTGTGAGACA 60.118 43.478 0.00 0.00 0.00 3.41
149 150 3.251729 CCATCCAAACAAGTGTGAGACAG 59.748 47.826 0.00 0.00 0.00 3.51
150 151 3.627395 TCCAAACAAGTGTGAGACAGT 57.373 42.857 0.00 0.00 32.07 3.55
151 152 3.950397 TCCAAACAAGTGTGAGACAGTT 58.050 40.909 0.00 0.00 42.09 3.16
152 153 4.331968 TCCAAACAAGTGTGAGACAGTTT 58.668 39.130 0.00 0.00 39.57 2.66
153 154 4.764823 TCCAAACAAGTGTGAGACAGTTTT 59.235 37.500 1.66 0.00 39.57 2.43
154 155 5.095490 CCAAACAAGTGTGAGACAGTTTTC 58.905 41.667 1.66 0.00 39.57 2.29
155 156 5.335583 CCAAACAAGTGTGAGACAGTTTTCA 60.336 40.000 1.66 0.00 39.57 2.69
156 157 5.551760 AACAAGTGTGAGACAGTTTTCAG 57.448 39.130 0.00 0.00 39.57 3.02
157 158 4.832248 ACAAGTGTGAGACAGTTTTCAGA 58.168 39.130 0.00 0.00 39.57 3.27
158 159 5.245531 ACAAGTGTGAGACAGTTTTCAGAA 58.754 37.500 0.00 0.00 39.57 3.02
159 160 5.352569 ACAAGTGTGAGACAGTTTTCAGAAG 59.647 40.000 0.00 0.00 39.57 2.85
160 161 5.344743 AGTGTGAGACAGTTTTCAGAAGA 57.655 39.130 0.00 0.00 0.00 2.87
161 162 5.355596 AGTGTGAGACAGTTTTCAGAAGAG 58.644 41.667 0.00 0.00 0.00 2.85
162 163 4.509600 GTGTGAGACAGTTTTCAGAAGAGG 59.490 45.833 0.00 0.00 0.00 3.69
163 164 4.162320 TGTGAGACAGTTTTCAGAAGAGGT 59.838 41.667 0.00 0.00 0.00 3.85
164 165 4.747605 GTGAGACAGTTTTCAGAAGAGGTC 59.252 45.833 0.00 0.00 0.00 3.85
165 166 4.651503 TGAGACAGTTTTCAGAAGAGGTCT 59.348 41.667 7.37 7.37 37.10 3.85
166 167 5.833667 TGAGACAGTTTTCAGAAGAGGTCTA 59.166 40.000 7.55 0.00 34.76 2.59
167 168 6.323996 TGAGACAGTTTTCAGAAGAGGTCTAA 59.676 38.462 7.55 0.35 34.76 2.10
168 169 6.754193 AGACAGTTTTCAGAAGAGGTCTAAG 58.246 40.000 6.28 0.00 33.56 2.18
169 170 5.301555 ACAGTTTTCAGAAGAGGTCTAAGC 58.698 41.667 0.00 0.00 33.56 3.09
170 171 4.693095 CAGTTTTCAGAAGAGGTCTAAGCC 59.307 45.833 0.00 0.00 33.56 4.35
171 172 4.348168 AGTTTTCAGAAGAGGTCTAAGCCA 59.652 41.667 0.00 0.00 33.56 4.75
172 173 4.543590 TTTCAGAAGAGGTCTAAGCCAG 57.456 45.455 0.00 0.00 33.56 4.85
173 174 3.458044 TCAGAAGAGGTCTAAGCCAGA 57.542 47.619 0.00 0.00 33.56 3.86
181 182 2.478547 GTCTAAGCCAGACGTCTAGC 57.521 55.000 25.80 25.80 44.19 3.42
182 183 1.743958 GTCTAAGCCAGACGTCTAGCA 59.256 52.381 32.37 15.71 44.19 3.49
183 184 2.017782 TCTAAGCCAGACGTCTAGCAG 58.982 52.381 32.37 23.13 32.96 4.24
184 185 0.456221 TAAGCCAGACGTCTAGCAGC 59.544 55.000 32.37 24.13 32.96 5.25
185 186 2.549611 AAGCCAGACGTCTAGCAGCG 62.550 60.000 32.37 14.06 32.96 5.18
186 187 2.878429 CCAGACGTCTAGCAGCGT 59.122 61.111 19.57 6.55 44.50 5.07
187 188 1.515088 CCAGACGTCTAGCAGCGTG 60.515 63.158 19.57 3.84 41.70 5.34
188 189 1.515088 CAGACGTCTAGCAGCGTGG 60.515 63.158 19.57 0.00 41.70 4.94
189 190 1.674651 AGACGTCTAGCAGCGTGGA 60.675 57.895 18.46 0.00 41.70 4.02
190 191 1.514443 GACGTCTAGCAGCGTGGAC 60.514 63.158 8.70 5.68 41.70 4.02
191 192 2.196382 GACGTCTAGCAGCGTGGACA 62.196 60.000 8.70 0.00 41.70 4.02
192 193 1.801913 CGTCTAGCAGCGTGGACAC 60.802 63.158 13.17 0.00 0.00 3.67
193 194 1.289066 GTCTAGCAGCGTGGACACA 59.711 57.895 3.12 0.00 0.00 3.72
194 195 0.108615 GTCTAGCAGCGTGGACACAT 60.109 55.000 3.12 0.00 0.00 3.21
195 196 0.173481 TCTAGCAGCGTGGACACATC 59.827 55.000 3.12 0.00 0.00 3.06
196 197 0.807667 CTAGCAGCGTGGACACATCC 60.808 60.000 3.12 0.00 46.48 3.51
205 206 2.267045 GGACACATCCAAACTGGCC 58.733 57.895 0.00 0.00 45.47 5.36
206 207 1.250840 GGACACATCCAAACTGGCCC 61.251 60.000 0.00 0.00 45.47 5.80
207 208 0.251341 GACACATCCAAACTGGCCCT 60.251 55.000 0.00 0.00 37.47 5.19
208 209 0.251341 ACACATCCAAACTGGCCCTC 60.251 55.000 0.00 0.00 37.47 4.30
230 231 1.583556 TATGTGACATGCTCCTGGGT 58.416 50.000 8.61 0.00 0.00 4.51
238 239 2.975489 ACATGCTCCTGGGTCCTTATAG 59.025 50.000 0.00 0.00 0.00 1.31
247 248 4.106663 CCTGGGTCCTTATAGTAGGAGAGT 59.893 50.000 0.00 0.00 44.81 3.24
257 258 8.301002 CCTTATAGTAGGAGAGTATGCTTTGAC 58.699 40.741 0.00 0.00 37.50 3.18
264 265 6.421485 AGGAGAGTATGCTTTGACAAATGAT 58.579 36.000 0.05 0.00 0.00 2.45
276 277 6.631971 TTGACAAATGATCAAAGCTACACA 57.368 33.333 0.00 0.00 33.16 3.72
292 293 9.899661 AAAGCTACACATATTGATGGTAAGTAA 57.100 29.630 0.00 0.00 37.39 2.24
331 335 8.928270 ATAAAGTTAGGTCAACGAGTTCATAG 57.072 34.615 0.00 0.00 42.35 2.23
336 340 3.444388 AGGTCAACGAGTTCATAGAGACC 59.556 47.826 10.90 10.90 43.44 3.85
337 341 3.427243 GTCAACGAGTTCATAGAGACCG 58.573 50.000 0.00 0.00 0.00 4.79
346 350 0.947244 CATAGAGACCGGCCAAATGC 59.053 55.000 0.00 0.00 40.16 3.56
357 361 1.875963 CCAAATGCCAGACGTCCAC 59.124 57.895 13.01 2.24 0.00 4.02
358 362 0.888736 CCAAATGCCAGACGTCCACA 60.889 55.000 13.01 8.63 0.00 4.17
359 363 0.238289 CAAATGCCAGACGTCCACAC 59.762 55.000 13.01 0.00 0.00 3.82
383 401 8.194769 CACTCATTTTCATCAATCCATGAATGA 58.805 33.333 0.00 0.00 41.42 2.57
407 425 3.418684 TTTGGCTAGTTGGACCTCTTC 57.581 47.619 0.00 0.00 0.00 2.87
408 426 2.327325 TGGCTAGTTGGACCTCTTCT 57.673 50.000 0.00 0.00 0.00 2.85
416 434 4.974399 AGTTGGACCTCTTCTAAACTTGG 58.026 43.478 0.00 0.00 31.08 3.61
419 437 3.720002 TGGACCTCTTCTAAACTTGGGTT 59.280 43.478 0.00 0.00 37.24 4.11
433 451 5.869649 ACTTGGGTTTATTTGCTTCTTGT 57.130 34.783 0.00 0.00 0.00 3.16
446 464 7.750229 TTTGCTTCTTGTCTTCTATGTTGAT 57.250 32.000 0.00 0.00 0.00 2.57
492 511 5.743398 CGTTGACTTGTTGACAATGACATTT 59.257 36.000 0.00 0.00 38.82 2.32
495 514 6.861144 TGACTTGTTGACAATGACATTTTGA 58.139 32.000 0.00 0.00 35.02 2.69
502 521 6.989796 TGACAATGACATTTTGAATGAACG 57.010 33.333 7.59 0.00 0.00 3.95
522 541 6.038161 TGAACGTTCATTGACTGAATTGAGTT 59.962 34.615 26.53 0.00 45.36 3.01
528 547 6.962686 TCATTGACTGAATTGAGTTGTTGAG 58.037 36.000 0.00 0.00 0.00 3.02
529 548 6.543465 TCATTGACTGAATTGAGTTGTTGAGT 59.457 34.615 0.00 0.00 0.00 3.41
537 556 3.904800 TGAGTTGTTGAGTGAGTTGGA 57.095 42.857 0.00 0.00 0.00 3.53
548 567 5.890334 TGAGTGAGTTGGATTTTTGTTGAC 58.110 37.500 0.00 0.00 0.00 3.18
558 577 6.977213 TGGATTTTTGTTGACTACCTTAAGC 58.023 36.000 0.00 0.00 0.00 3.09
559 578 6.547880 TGGATTTTTGTTGACTACCTTAAGCA 59.452 34.615 0.00 0.00 0.00 3.91
570 589 5.003804 ACTACCTTAAGCATTGTTGACTGG 58.996 41.667 0.00 0.00 0.00 4.00
589 608 5.393866 ACTGGGTTGGAAGACAATTTGTAT 58.606 37.500 1.15 0.00 41.95 2.29
594 613 8.310382 TGGGTTGGAAGACAATTTGTATTTATG 58.690 33.333 10.48 0.00 41.95 1.90
676 695 6.977502 TGAAAAATAGACAAATGTGTGTGTGG 59.022 34.615 0.00 0.00 38.41 4.17
690 890 1.490910 TGTGTGGGTGTGTGTTATGGA 59.509 47.619 0.00 0.00 0.00 3.41
709 909 0.475044 ACACATTAACCACACCCGGT 59.525 50.000 0.00 0.00 42.71 5.28
808 1008 2.147958 GTTGTTACCATTGCCGTCTCA 58.852 47.619 0.00 0.00 0.00 3.27
851 1051 2.115291 GTTCCTTCCCTGCCATCGC 61.115 63.158 0.00 0.00 0.00 4.58
931 1131 0.687757 ATCCAGAACCCTAGCTCGCA 60.688 55.000 0.00 0.00 0.00 5.10
955 1156 2.785258 GTGTTTCCGCTGCCGATC 59.215 61.111 0.00 0.00 36.29 3.69
975 1176 1.439679 GGTCCATCCGTGAGTTGTTC 58.560 55.000 0.00 0.00 0.00 3.18
979 1180 0.439985 CATCCGTGAGTTGTTCGCTG 59.560 55.000 0.00 0.00 34.06 5.18
987 1188 1.721133 GTTGTTCGCTGCCGTTTCG 60.721 57.895 0.00 0.00 35.54 3.46
1118 1319 3.432588 CGTCGACTCCGCCTCTGT 61.433 66.667 14.70 0.00 35.37 3.41
1164 1365 1.429825 CAGCGACGACGAAGAGGAT 59.570 57.895 12.29 0.00 42.66 3.24
1233 1434 3.706086 GGCAAGTGATTTGTAATCCCCAT 59.294 43.478 0.00 0.00 39.08 4.00
1256 1457 3.249799 CGCGAATATGATTGTTGGGCTTA 59.750 43.478 0.00 0.00 0.00 3.09
1377 1578 2.960129 GGCGCGGTAGATTCGGTG 60.960 66.667 8.83 0.00 0.00 4.94
1409 1610 3.842069 GGGGGTGAGGTTTCTGTTT 57.158 52.632 0.00 0.00 0.00 2.83
1422 1623 4.808364 GGTTTCTGTTTTGCTTGCAATGTA 59.192 37.500 8.93 0.00 0.00 2.29
1430 1631 2.153645 TGCTTGCAATGTAGTGACAGG 58.846 47.619 0.00 0.00 39.50 4.00
1438 1639 3.914426 ATGTAGTGACAGGTGGATTCC 57.086 47.619 0.00 0.00 39.50 3.01
1466 1667 0.385473 CGTGCAACATTTGACGGGAC 60.385 55.000 0.00 0.00 35.74 4.46
1508 1709 3.847542 GGTTTGTTGGTGTTAAAACCGT 58.152 40.909 10.32 0.00 43.73 4.83
1617 1818 8.963725 TCATTATAGTTACCACCTATCATACGG 58.036 37.037 0.00 0.00 0.00 4.02
1618 1819 5.656213 ATAGTTACCACCTATCATACGGC 57.344 43.478 0.00 0.00 0.00 5.68
1619 1820 3.573695 AGTTACCACCTATCATACGGCT 58.426 45.455 0.00 0.00 0.00 5.52
1620 1821 3.965347 AGTTACCACCTATCATACGGCTT 59.035 43.478 0.00 0.00 0.00 4.35
1621 1822 4.407945 AGTTACCACCTATCATACGGCTTT 59.592 41.667 0.00 0.00 0.00 3.51
1622 1823 3.470645 ACCACCTATCATACGGCTTTC 57.529 47.619 0.00 0.00 0.00 2.62
1623 1824 3.039011 ACCACCTATCATACGGCTTTCT 58.961 45.455 0.00 0.00 0.00 2.52
1624 1825 4.220724 ACCACCTATCATACGGCTTTCTA 58.779 43.478 0.00 0.00 0.00 2.10
1625 1826 4.652421 ACCACCTATCATACGGCTTTCTAA 59.348 41.667 0.00 0.00 0.00 2.10
1626 1827 4.989168 CCACCTATCATACGGCTTTCTAAC 59.011 45.833 0.00 0.00 0.00 2.34
1627 1828 5.221461 CCACCTATCATACGGCTTTCTAACT 60.221 44.000 0.00 0.00 0.00 2.24
1628 1829 5.921408 CACCTATCATACGGCTTTCTAACTC 59.079 44.000 0.00 0.00 0.00 3.01
1629 1830 5.010820 ACCTATCATACGGCTTTCTAACTCC 59.989 44.000 0.00 0.00 0.00 3.85
1630 1831 5.010719 CCTATCATACGGCTTTCTAACTCCA 59.989 44.000 0.00 0.00 0.00 3.86
1631 1832 4.119442 TCATACGGCTTTCTAACTCCAC 57.881 45.455 0.00 0.00 0.00 4.02
1632 1833 3.767673 TCATACGGCTTTCTAACTCCACT 59.232 43.478 0.00 0.00 0.00 4.00
1633 1834 4.222145 TCATACGGCTTTCTAACTCCACTT 59.778 41.667 0.00 0.00 0.00 3.16
1634 1835 3.041508 ACGGCTTTCTAACTCCACTTC 57.958 47.619 0.00 0.00 0.00 3.01
1635 1836 2.633481 ACGGCTTTCTAACTCCACTTCT 59.367 45.455 0.00 0.00 0.00 2.85
1636 1837 3.071167 ACGGCTTTCTAACTCCACTTCTT 59.929 43.478 0.00 0.00 0.00 2.52
1637 1838 4.065789 CGGCTTTCTAACTCCACTTCTTT 58.934 43.478 0.00 0.00 0.00 2.52
1638 1839 4.515567 CGGCTTTCTAACTCCACTTCTTTT 59.484 41.667 0.00 0.00 0.00 2.27
1639 1840 5.008712 CGGCTTTCTAACTCCACTTCTTTTT 59.991 40.000 0.00 0.00 0.00 1.94
1640 1841 6.439599 GGCTTTCTAACTCCACTTCTTTTTC 58.560 40.000 0.00 0.00 0.00 2.29
1641 1842 6.263392 GGCTTTCTAACTCCACTTCTTTTTCT 59.737 38.462 0.00 0.00 0.00 2.52
1642 1843 7.135467 GCTTTCTAACTCCACTTCTTTTTCTG 58.865 38.462 0.00 0.00 0.00 3.02
1643 1844 7.568199 TTTCTAACTCCACTTCTTTTTCTGG 57.432 36.000 0.00 0.00 0.00 3.86
1644 1845 6.248569 TCTAACTCCACTTCTTTTTCTGGT 57.751 37.500 0.00 0.00 0.00 4.00
1645 1846 6.289064 TCTAACTCCACTTCTTTTTCTGGTC 58.711 40.000 0.00 0.00 0.00 4.02
1646 1847 3.467803 ACTCCACTTCTTTTTCTGGTCG 58.532 45.455 0.00 0.00 0.00 4.79
1647 1848 3.118371 ACTCCACTTCTTTTTCTGGTCGT 60.118 43.478 0.00 0.00 0.00 4.34
1648 1849 3.877508 CTCCACTTCTTTTTCTGGTCGTT 59.122 43.478 0.00 0.00 0.00 3.85
1649 1850 3.875134 TCCACTTCTTTTTCTGGTCGTTC 59.125 43.478 0.00 0.00 0.00 3.95
1650 1851 3.003378 CCACTTCTTTTTCTGGTCGTTCC 59.997 47.826 0.00 0.00 0.00 3.62
1651 1852 2.870411 ACTTCTTTTTCTGGTCGTTCCG 59.130 45.455 0.00 0.00 39.52 4.30
1652 1853 1.223187 TCTTTTTCTGGTCGTTCCGC 58.777 50.000 0.00 0.00 39.52 5.54
1653 1854 1.202604 TCTTTTTCTGGTCGTTCCGCT 60.203 47.619 0.00 0.00 39.52 5.52
1654 1855 1.194772 CTTTTTCTGGTCGTTCCGCTC 59.805 52.381 0.00 0.00 39.52 5.03
1655 1856 0.391597 TTTTCTGGTCGTTCCGCTCT 59.608 50.000 0.00 0.00 39.52 4.09
1656 1857 0.319555 TTTCTGGTCGTTCCGCTCTG 60.320 55.000 0.00 0.00 39.52 3.35
1657 1858 1.461091 TTCTGGTCGTTCCGCTCTGT 61.461 55.000 0.00 0.00 39.52 3.41
1658 1859 1.444553 CTGGTCGTTCCGCTCTGTC 60.445 63.158 0.00 0.00 39.52 3.51
1659 1860 2.504244 GGTCGTTCCGCTCTGTCG 60.504 66.667 0.00 0.00 0.00 4.35
1667 1868 4.218597 CGCTCTGTCGGATCGATG 57.781 61.111 0.54 0.00 38.42 3.84
1668 1869 1.371022 CGCTCTGTCGGATCGATGG 60.371 63.158 0.54 0.00 38.42 3.51
1669 1870 1.736586 GCTCTGTCGGATCGATGGT 59.263 57.895 0.54 0.00 38.42 3.55
1670 1871 0.952280 GCTCTGTCGGATCGATGGTA 59.048 55.000 0.54 0.00 38.42 3.25
1671 1872 1.068885 GCTCTGTCGGATCGATGGTAG 60.069 57.143 0.54 0.00 38.42 3.18
1672 1873 2.222886 CTCTGTCGGATCGATGGTAGT 58.777 52.381 0.54 0.00 38.42 2.73
1673 1874 2.219458 TCTGTCGGATCGATGGTAGTC 58.781 52.381 0.54 0.00 38.42 2.59
1674 1875 2.158798 TCTGTCGGATCGATGGTAGTCT 60.159 50.000 0.54 0.00 38.42 3.24
1675 1876 2.219458 TGTCGGATCGATGGTAGTCTC 58.781 52.381 0.54 0.00 38.42 3.36
1676 1877 2.219458 GTCGGATCGATGGTAGTCTCA 58.781 52.381 0.54 0.00 38.42 3.27
1677 1878 2.224549 GTCGGATCGATGGTAGTCTCAG 59.775 54.545 0.54 0.00 38.42 3.35
1678 1879 2.104281 TCGGATCGATGGTAGTCTCAGA 59.896 50.000 0.54 0.00 0.00 3.27
1679 1880 2.482336 CGGATCGATGGTAGTCTCAGAG 59.518 54.545 0.54 0.00 0.00 3.35
1680 1881 3.745799 GGATCGATGGTAGTCTCAGAGA 58.254 50.000 0.54 0.00 0.00 3.10
1681 1882 4.331968 GGATCGATGGTAGTCTCAGAGAT 58.668 47.826 0.54 0.00 0.00 2.75
1682 1883 4.394920 GGATCGATGGTAGTCTCAGAGATC 59.605 50.000 0.54 0.00 33.88 2.75
1683 1884 4.698201 TCGATGGTAGTCTCAGAGATCT 57.302 45.455 2.64 0.00 0.00 2.75
1684 1885 4.384940 TCGATGGTAGTCTCAGAGATCTG 58.615 47.826 0.00 3.33 45.08 2.90
1685 1886 3.501828 CGATGGTAGTCTCAGAGATCTGG 59.498 52.174 0.00 0.00 43.91 3.86
1686 1887 4.469657 GATGGTAGTCTCAGAGATCTGGT 58.530 47.826 0.00 0.00 43.91 4.00
1687 1888 5.626142 GATGGTAGTCTCAGAGATCTGGTA 58.374 45.833 0.00 0.00 43.91 3.25
1688 1889 5.452341 TGGTAGTCTCAGAGATCTGGTAA 57.548 43.478 0.00 0.00 43.91 2.85
1689 1890 5.194432 TGGTAGTCTCAGAGATCTGGTAAC 58.806 45.833 0.00 6.15 43.91 2.50
1690 1891 4.581409 GGTAGTCTCAGAGATCTGGTAACC 59.419 50.000 0.00 4.19 43.91 2.85
1691 1892 4.601406 AGTCTCAGAGATCTGGTAACCT 57.399 45.455 0.00 0.00 43.91 3.50
1692 1893 4.532834 AGTCTCAGAGATCTGGTAACCTC 58.467 47.826 0.00 0.00 43.91 3.85
1693 1894 3.634910 GTCTCAGAGATCTGGTAACCTCC 59.365 52.174 0.00 0.00 43.91 4.30
1694 1895 2.621055 CTCAGAGATCTGGTAACCTCCG 59.379 54.545 0.00 0.00 43.91 4.63
1695 1896 2.241430 TCAGAGATCTGGTAACCTCCGA 59.759 50.000 0.00 0.00 43.91 4.55
1696 1897 2.359531 CAGAGATCTGGTAACCTCCGAC 59.640 54.545 0.00 0.00 40.20 4.79
1697 1898 2.242708 AGAGATCTGGTAACCTCCGACT 59.757 50.000 0.00 0.00 0.00 4.18
1698 1899 3.025262 GAGATCTGGTAACCTCCGACTT 58.975 50.000 0.00 0.00 0.00 3.01
1699 1900 3.442076 AGATCTGGTAACCTCCGACTTT 58.558 45.455 0.00 0.00 0.00 2.66
1700 1901 3.838903 AGATCTGGTAACCTCCGACTTTT 59.161 43.478 0.00 0.00 0.00 2.27
1701 1902 4.286291 AGATCTGGTAACCTCCGACTTTTT 59.714 41.667 0.00 0.00 0.00 1.94
1911 2112 5.255687 TGAATTGCTGAAGCTTAGGATTGA 58.744 37.500 0.00 0.00 42.66 2.57
2062 2264 1.153289 ATCATCGACCAGGCACAGC 60.153 57.895 0.00 0.00 0.00 4.40
2086 2288 8.551440 AGCAATATGGAGATAACTGGCAATATA 58.449 33.333 0.00 0.00 0.00 0.86
2087 2289 9.177608 GCAATATGGAGATAACTGGCAATATAA 57.822 33.333 0.00 0.00 0.00 0.98
2226 2428 5.309282 AGAGGGAACATGAGGGAAGAATATC 59.691 44.000 0.00 0.00 0.00 1.63
2227 2429 4.977739 AGGGAACATGAGGGAAGAATATCA 59.022 41.667 0.00 0.00 0.00 2.15
2253 2455 5.368256 AATGCTGTGTTGAGAAAGATCAC 57.632 39.130 0.00 0.00 0.00 3.06
2420 2622 9.846248 GTATGCTTGTTAGTCTCATTTTTCAAT 57.154 29.630 0.00 0.00 0.00 2.57
2441 2643 3.889815 TGCATTAACCATTAGCAGCTCT 58.110 40.909 0.00 0.00 0.00 4.09
2479 2682 3.281727 TTAGCAGCTAAGGGGACATTG 57.718 47.619 11.07 0.00 0.00 2.82
2490 2700 1.812571 GGGGACATTGTTGTGCACTAG 59.187 52.381 19.41 0.86 43.70 2.57
2505 2715 7.189693 TGTGCACTAGTTTTTGATAGTTCTG 57.810 36.000 19.41 0.00 29.77 3.02
2681 2897 5.047092 CCCACTTTCAATTTATCCAGTTGCT 60.047 40.000 0.00 0.00 0.00 3.91
2685 2901 7.756722 CACTTTCAATTTATCCAGTTGCTTAGG 59.243 37.037 0.00 0.00 0.00 2.69
3109 3359 1.180907 TTCCAGTTGTGCTTGCACAA 58.819 45.000 29.84 29.84 42.10 3.33
3116 3366 1.326328 TGTGCTTGCACAATGCCTTA 58.674 45.000 23.78 0.32 44.23 2.69
3347 3601 6.015519 TGCTGCATCAAAAGGTAAGTTGTATT 60.016 34.615 0.00 0.00 0.00 1.89
3589 3929 5.702209 AGTATTTGCAGAAAAATGGCCAAAG 59.298 36.000 10.96 0.00 32.16 2.77
3590 3930 1.881591 TGCAGAAAAATGGCCAAAGC 58.118 45.000 10.96 6.98 38.76 3.51
3599 4110 1.839424 ATGGCCAAAGCAAGTACTCC 58.161 50.000 10.96 0.00 42.56 3.85
3602 4113 1.454201 GCCAAAGCAAGTACTCCCTC 58.546 55.000 0.00 0.00 39.53 4.30
3603 4114 1.950954 GCCAAAGCAAGTACTCCCTCC 60.951 57.143 0.00 0.00 39.53 4.30
3606 4117 1.349067 AAGCAAGTACTCCCTCCGTT 58.651 50.000 0.00 0.00 0.00 4.44
3608 4119 1.275573 AGCAAGTACTCCCTCCGTTTC 59.724 52.381 0.00 0.00 0.00 2.78
3611 4122 3.735591 CAAGTACTCCCTCCGTTTCAAA 58.264 45.455 0.00 0.00 0.00 2.69
3616 4127 3.827722 ACTCCCTCCGTTTCAAATTTGA 58.172 40.909 16.91 16.91 34.92 2.69
3622 4133 6.321690 TCCCTCCGTTTCAAATTTGAACTAAA 59.678 34.615 28.78 14.61 45.99 1.85
3625 4136 7.042992 CCTCCGTTTCAAATTTGAACTAAAACC 60.043 37.037 28.78 12.28 45.99 3.27
3626 4137 7.321153 TCCGTTTCAAATTTGAACTAAAACCA 58.679 30.769 28.78 12.29 45.99 3.67
3627 4138 7.275999 TCCGTTTCAAATTTGAACTAAAACCAC 59.724 33.333 28.78 20.52 45.99 4.16
3630 4141 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
3632 4143 7.313646 TCAAATTTGAACTAAAACCACGACAA 58.686 30.769 18.45 0.00 33.55 3.18
3637 4148 7.556733 TTGAACTAAAACCACGACAAGTAAT 57.443 32.000 0.00 0.00 0.00 1.89
3638 4149 7.556733 TGAACTAAAACCACGACAAGTAATT 57.443 32.000 0.00 0.00 0.00 1.40
3639 4150 7.987649 TGAACTAAAACCACGACAAGTAATTT 58.012 30.769 0.00 0.00 0.00 1.82
3640 4151 7.911205 TGAACTAAAACCACGACAAGTAATTTG 59.089 33.333 0.00 0.00 42.68 2.32
3641 4152 6.731164 ACTAAAACCACGACAAGTAATTTGG 58.269 36.000 0.00 0.00 41.25 3.28
3642 4153 5.838531 AAAACCACGACAAGTAATTTGGA 57.161 34.783 0.00 0.00 41.25 3.53
3643 4154 5.838531 AAACCACGACAAGTAATTTGGAA 57.161 34.783 0.00 0.00 41.25 3.53
3644 4155 6.399639 AAACCACGACAAGTAATTTGGAAT 57.600 33.333 0.00 0.00 41.25 3.01
3656 4167 7.947782 AGTAATTTGGAATGGAGGGAGTATA 57.052 36.000 0.00 0.00 0.00 1.47
3658 4169 9.629649 AGTAATTTGGAATGGAGGGAGTATATA 57.370 33.333 0.00 0.00 0.00 0.86
3738 4430 4.322725 CGCATTAGGGAAGGTATATCAGCA 60.323 45.833 0.00 0.00 0.00 4.41
3740 4432 6.183347 GCATTAGGGAAGGTATATCAGCATT 58.817 40.000 0.00 0.00 0.00 3.56
3891 4583 1.202114 GAGAGTCAGTCTGCTGTCCAG 59.798 57.143 9.06 0.00 43.05 3.86
3993 4686 5.047092 CCCAAACAAATTTCAGAGCCTGTAT 60.047 40.000 0.00 0.00 32.61 2.29
4277 4979 4.730949 TTTCTTCCACCTAGTGTATCCG 57.269 45.455 0.00 0.00 0.00 4.18
4482 5362 1.143684 AGCAAAGCTTCTTGACCCTCA 59.856 47.619 0.00 0.00 33.89 3.86
4597 5477 3.466836 TGCCGTGATTCTTGATGATACC 58.533 45.455 0.00 0.00 0.00 2.73
4623 5503 7.203255 AGTATGTAAGTGCTTTTCTTTGGTC 57.797 36.000 0.00 0.00 0.00 4.02
4657 5537 5.339990 GCACACACTTATGACACTGTTTTT 58.660 37.500 0.00 0.00 0.00 1.94
4808 5688 5.004922 TGTGGTTTTGATGTTTCCTGTTC 57.995 39.130 0.00 0.00 0.00 3.18
5356 6237 1.808945 GATGTTGCTTAGCACTGCACT 59.191 47.619 6.34 0.00 38.71 4.40
5374 6255 2.412770 CACTTTTTGCCATCGCCATTTC 59.587 45.455 0.00 0.00 0.00 2.17
5461 6342 2.350498 GTGGTGATGGAAACGATAACGG 59.650 50.000 0.00 0.00 44.46 4.44
5537 6422 8.614346 CACTATGAACTAGAGGTCACTAACTAC 58.386 40.741 0.00 0.00 0.00 2.73
5763 6648 1.577328 CCATTTGCTCCGCAGACGTT 61.577 55.000 0.00 0.00 40.61 3.99
5802 6687 1.514678 TTGTCGCTGTGGATGTTGGC 61.515 55.000 0.00 0.00 0.00 4.52
6076 6967 1.938577 CCACTGATCCAGCGAATGAAG 59.061 52.381 0.00 0.00 34.37 3.02
6089 6980 6.261826 CCAGCGAATGAAGAGGATAAAGAAAT 59.738 38.462 0.00 0.00 0.00 2.17
6112 7003 0.749091 TGTTGCTGCTGCTGTCACTT 60.749 50.000 17.00 0.00 40.48 3.16
6201 7092 3.349927 TGTGACATGTACCGTAGCTACT 58.650 45.455 21.20 6.59 0.00 2.57
6234 7125 3.985925 CAGAAAGCTCAGCATTTTTGGAC 59.014 43.478 0.00 0.00 0.00 4.02
6273 7165 8.012957 TCCATTGTGTTAATTTTGGTACTTGT 57.987 30.769 0.00 0.00 0.00 3.16
6274 7166 9.132923 TCCATTGTGTTAATTTTGGTACTTGTA 57.867 29.630 0.00 0.00 0.00 2.41
6459 7353 3.427098 CCAGCCGCATCATAAATGCATAG 60.427 47.826 0.00 0.00 44.75 2.23
6560 7458 9.853555 TCAATCCATGACAACAAATTATTACAC 57.146 29.630 0.00 0.00 31.50 2.90
6602 7500 7.966246 ACATCAAATGCAACACAAATACAAT 57.034 28.000 0.00 0.00 0.00 2.71
6613 7511 8.153411 GCAACACAAATACAATAAAGTTTAGCG 58.847 33.333 1.21 0.00 0.00 4.26
6659 7560 7.067372 TCCACAATACAAAAAGCATAGAGATGG 59.933 37.037 0.00 0.00 33.26 3.51
6676 7578 1.873698 TGGAACTAGGACGTTGTTGC 58.126 50.000 6.95 6.95 33.63 4.17
6685 7587 1.876497 GACGTTGTTGCCCATGCCAT 61.876 55.000 0.00 0.00 36.33 4.40
6686 7588 1.446445 CGTTGTTGCCCATGCCATG 60.446 57.895 0.00 0.00 36.33 3.66
6688 7590 2.957080 TTGTTGCCCATGCCATGCC 61.957 57.895 0.00 0.00 36.33 4.40
6689 7591 3.078836 GTTGCCCATGCCATGCCT 61.079 61.111 0.00 0.00 36.33 4.75
6690 7592 1.757731 GTTGCCCATGCCATGCCTA 60.758 57.895 0.00 0.00 36.33 3.93
6692 7594 2.123769 GCCCATGCCATGCCTACA 60.124 61.111 0.00 0.00 0.00 2.74
6693 7595 1.757731 GCCCATGCCATGCCTACAA 60.758 57.895 0.00 0.00 0.00 2.41
6717 7619 8.860128 CAACATGACATCTTTTTGAAGATCATG 58.140 33.333 20.42 20.42 41.90 3.07
6724 7626 8.950210 ACATCTTTTTGAAGATCATGATACGTT 58.050 29.630 8.54 2.62 37.41 3.99
6796 7698 2.041153 CCTTCTGGTTGGTTGCACC 58.959 57.895 0.00 0.00 39.22 5.01
6805 7707 0.970937 TTGGTTGCACCGGTTTTCCA 60.971 50.000 2.97 9.00 42.58 3.53
6846 7748 7.986889 GGTGTAATCCAAATTTTATCCATGCTT 59.013 33.333 0.00 0.00 0.00 3.91
6852 7754 7.678837 TCCAAATTTTATCCATGCTTGTTCTT 58.321 30.769 0.00 0.00 0.00 2.52
6854 7756 9.090692 CCAAATTTTATCCATGCTTGTTCTTAG 57.909 33.333 0.00 0.00 0.00 2.18
6890 7950 4.778213 TGCTAGCTGTAATCCCTTGATT 57.222 40.909 17.23 0.00 43.56 2.57
6902 7962 7.730784 TGTAATCCCTTGATTCCAAAACCTAAA 59.269 33.333 0.00 0.00 41.44 1.85
6903 7963 7.813087 AATCCCTTGATTCCAAAACCTAAAT 57.187 32.000 0.00 0.00 36.45 1.40
6934 8428 8.347004 TCACACAATAGCAAATTAGGATTTCA 57.653 30.769 0.00 0.00 33.25 2.69
6950 8444 3.500448 TTTCAAAATCCCAAAAGCCCC 57.500 42.857 0.00 0.00 0.00 5.80
7030 8524 1.376295 GGGGCTTGCAATTGGCTTG 60.376 57.895 7.72 0.00 45.15 4.01
7035 8529 2.334838 GCTTGCAATTGGCTTGAAGAG 58.665 47.619 7.72 0.00 45.15 2.85
7041 8535 5.012239 TGCAATTGGCTTGAAGAGAGTATT 58.988 37.500 7.72 0.00 45.15 1.89
7042 8536 5.106038 TGCAATTGGCTTGAAGAGAGTATTG 60.106 40.000 7.72 0.00 45.15 1.90
7045 8539 7.630082 GCAATTGGCTTGAAGAGAGTATTGAAT 60.630 37.037 7.72 0.00 40.25 2.57
7046 8540 8.896744 CAATTGGCTTGAAGAGAGTATTGAATA 58.103 33.333 0.00 0.00 36.97 1.75
7047 8541 7.849804 TTGGCTTGAAGAGAGTATTGAATAC 57.150 36.000 7.23 7.23 35.99 1.89
7074 8573 3.565307 TCCATTTGCTTGGAAGTTCACT 58.435 40.909 5.01 0.00 42.82 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.221742 GCCTGGCACTAATCCTTCTACTTAT 60.222 44.000 15.17 0.00 0.00 1.73
1 2 4.101119 GCCTGGCACTAATCCTTCTACTTA 59.899 45.833 15.17 0.00 0.00 2.24
2 3 3.118223 GCCTGGCACTAATCCTTCTACTT 60.118 47.826 15.17 0.00 0.00 2.24
3 4 2.436173 GCCTGGCACTAATCCTTCTACT 59.564 50.000 15.17 0.00 0.00 2.57
4 5 2.436173 AGCCTGGCACTAATCCTTCTAC 59.564 50.000 22.65 0.00 0.00 2.59
5 6 2.435805 CAGCCTGGCACTAATCCTTCTA 59.564 50.000 22.65 0.00 0.00 2.10
6 7 1.211457 CAGCCTGGCACTAATCCTTCT 59.789 52.381 22.65 0.00 0.00 2.85
7 8 1.065126 ACAGCCTGGCACTAATCCTTC 60.065 52.381 22.65 0.00 0.00 3.46
8 9 0.995024 ACAGCCTGGCACTAATCCTT 59.005 50.000 22.65 0.00 0.00 3.36
10 11 1.098050 CAACAGCCTGGCACTAATCC 58.902 55.000 22.65 0.00 0.00 3.01
12 13 1.888512 CAACAACAGCCTGGCACTAAT 59.111 47.619 22.65 0.00 0.00 1.73
13 14 1.317613 CAACAACAGCCTGGCACTAA 58.682 50.000 22.65 0.00 0.00 2.24
14 15 1.172180 GCAACAACAGCCTGGCACTA 61.172 55.000 22.65 0.00 0.00 2.74
15 16 2.492773 GCAACAACAGCCTGGCACT 61.493 57.895 22.65 1.25 0.00 4.40
16 17 2.028043 GCAACAACAGCCTGGCAC 59.972 61.111 22.65 0.00 0.00 5.01
24 25 3.536498 GAACCGCGGGCAACAACAG 62.536 63.158 31.76 0.00 39.74 3.16
25 26 3.587933 GAACCGCGGGCAACAACA 61.588 61.111 31.76 0.00 39.74 3.33
26 27 3.536498 CTGAACCGCGGGCAACAAC 62.536 63.158 31.76 12.20 39.74 3.32
27 28 3.283684 CTGAACCGCGGGCAACAA 61.284 61.111 31.76 7.58 39.74 2.83
38 39 3.110178 CGTTCGGTCGCCTGAACC 61.110 66.667 12.24 0.00 41.04 3.62
39 40 3.110178 CCGTTCGGTCGCCTGAAC 61.110 66.667 8.09 8.09 40.77 3.18
40 41 4.367023 CCCGTTCGGTCGCCTGAA 62.367 66.667 10.36 0.00 0.00 3.02
63 64 1.133025 CGTGAAAATTAGCCTGCCAGG 59.867 52.381 6.32 6.32 38.80 4.45
64 65 1.468054 GCGTGAAAATTAGCCTGCCAG 60.468 52.381 0.00 0.00 0.00 4.85
65 66 0.525761 GCGTGAAAATTAGCCTGCCA 59.474 50.000 0.00 0.00 0.00 4.92
66 67 0.179137 GGCGTGAAAATTAGCCTGCC 60.179 55.000 0.00 0.00 45.67 4.85
67 68 3.329114 GGCGTGAAAATTAGCCTGC 57.671 52.632 0.00 0.00 45.67 4.85
71 72 2.179949 GCTCAGGCGTGAAAATTAGC 57.820 50.000 10.76 5.49 30.14 3.09
85 86 2.108566 CTGGCCTGGATCGCTCAG 59.891 66.667 3.32 0.00 0.00 3.35
86 87 3.473647 CCTGGCCTGGATCGCTCA 61.474 66.667 23.89 0.00 0.00 4.26
87 88 3.157252 TCCTGGCCTGGATCGCTC 61.157 66.667 26.46 0.00 0.00 5.03
88 89 3.474570 GTCCTGGCCTGGATCGCT 61.475 66.667 31.63 0.00 38.52 4.93
89 90 3.112205 ATGTCCTGGCCTGGATCGC 62.112 63.158 31.63 20.22 38.52 4.58
90 91 1.227764 CATGTCCTGGCCTGGATCG 60.228 63.158 31.63 19.54 38.52 3.69
91 92 0.179034 GACATGTCCTGGCCTGGATC 60.179 60.000 31.63 23.92 38.52 3.36
92 93 0.622738 AGACATGTCCTGGCCTGGAT 60.623 55.000 31.63 17.60 38.52 3.41
93 94 0.042581 TAGACATGTCCTGGCCTGGA 59.957 55.000 26.46 26.46 30.62 3.86
94 95 0.911769 TTAGACATGTCCTGGCCTGG 59.088 55.000 22.36 22.36 30.62 4.45
95 96 2.749621 GTTTTAGACATGTCCTGGCCTG 59.250 50.000 22.21 2.54 30.62 4.85
96 97 2.644798 AGTTTTAGACATGTCCTGGCCT 59.355 45.455 22.21 10.24 30.62 5.19
97 98 3.073274 AGTTTTAGACATGTCCTGGCC 57.927 47.619 22.21 8.12 30.62 5.36
98 99 4.518970 TGAAAGTTTTAGACATGTCCTGGC 59.481 41.667 22.21 9.22 0.00 4.85
99 100 5.182001 CCTGAAAGTTTTAGACATGTCCTGG 59.818 44.000 22.21 12.19 0.00 4.45
100 101 5.997746 TCCTGAAAGTTTTAGACATGTCCTG 59.002 40.000 22.21 7.41 0.00 3.86
101 102 5.998363 GTCCTGAAAGTTTTAGACATGTCCT 59.002 40.000 22.21 8.90 0.00 3.85
102 103 5.998363 AGTCCTGAAAGTTTTAGACATGTCC 59.002 40.000 22.21 6.58 0.00 4.02
103 104 6.147985 GGAGTCCTGAAAGTTTTAGACATGTC 59.852 42.308 18.47 18.47 0.00 3.06
104 105 5.998363 GGAGTCCTGAAAGTTTTAGACATGT 59.002 40.000 8.88 0.00 0.00 3.21
105 106 5.997746 TGGAGTCCTGAAAGTTTTAGACATG 59.002 40.000 11.33 0.00 0.00 3.21
106 107 6.187727 TGGAGTCCTGAAAGTTTTAGACAT 57.812 37.500 11.33 0.00 0.00 3.06
107 108 5.623956 TGGAGTCCTGAAAGTTTTAGACA 57.376 39.130 11.33 0.00 0.00 3.41
108 109 5.644206 GGATGGAGTCCTGAAAGTTTTAGAC 59.356 44.000 11.33 7.13 44.16 2.59
109 110 5.805728 GGATGGAGTCCTGAAAGTTTTAGA 58.194 41.667 11.33 0.00 44.16 2.10
123 124 3.476552 TCACACTTGTTTGGATGGAGTC 58.523 45.455 0.00 0.00 0.00 3.36
124 125 3.136443 TCTCACACTTGTTTGGATGGAGT 59.864 43.478 0.00 0.00 0.00 3.85
125 126 3.499918 GTCTCACACTTGTTTGGATGGAG 59.500 47.826 0.00 0.00 0.00 3.86
126 127 3.118075 TGTCTCACACTTGTTTGGATGGA 60.118 43.478 0.00 0.00 0.00 3.41
127 128 3.213506 TGTCTCACACTTGTTTGGATGG 58.786 45.455 0.00 0.00 0.00 3.51
128 129 3.879295 ACTGTCTCACACTTGTTTGGATG 59.121 43.478 0.00 0.00 0.00 3.51
129 130 4.156455 ACTGTCTCACACTTGTTTGGAT 57.844 40.909 0.00 0.00 0.00 3.41
130 131 3.627395 ACTGTCTCACACTTGTTTGGA 57.373 42.857 0.00 0.00 0.00 3.53
131 132 4.701956 AAACTGTCTCACACTTGTTTGG 57.298 40.909 0.00 0.00 33.87 3.28
132 133 5.698832 TGAAAACTGTCTCACACTTGTTTG 58.301 37.500 0.00 0.00 34.71 2.93
133 134 5.705441 TCTGAAAACTGTCTCACACTTGTTT 59.295 36.000 0.00 0.00 35.41 2.83
134 135 5.245531 TCTGAAAACTGTCTCACACTTGTT 58.754 37.500 0.00 0.00 0.00 2.83
135 136 4.832248 TCTGAAAACTGTCTCACACTTGT 58.168 39.130 0.00 0.00 0.00 3.16
136 137 5.582269 TCTTCTGAAAACTGTCTCACACTTG 59.418 40.000 0.00 0.00 0.00 3.16
137 138 5.734720 TCTTCTGAAAACTGTCTCACACTT 58.265 37.500 0.00 0.00 0.00 3.16
138 139 5.344743 TCTTCTGAAAACTGTCTCACACT 57.655 39.130 0.00 0.00 0.00 3.55
139 140 4.509600 CCTCTTCTGAAAACTGTCTCACAC 59.490 45.833 0.00 0.00 0.00 3.82
140 141 4.162320 ACCTCTTCTGAAAACTGTCTCACA 59.838 41.667 0.00 0.00 0.00 3.58
141 142 4.698575 ACCTCTTCTGAAAACTGTCTCAC 58.301 43.478 0.00 0.00 0.00 3.51
142 143 4.651503 AGACCTCTTCTGAAAACTGTCTCA 59.348 41.667 5.99 0.00 31.12 3.27
143 144 5.208463 AGACCTCTTCTGAAAACTGTCTC 57.792 43.478 5.99 0.00 31.12 3.36
144 145 6.732896 TTAGACCTCTTCTGAAAACTGTCT 57.267 37.500 12.85 12.85 35.55 3.41
145 146 5.407084 GCTTAGACCTCTTCTGAAAACTGTC 59.593 44.000 0.00 0.00 35.55 3.51
146 147 5.301555 GCTTAGACCTCTTCTGAAAACTGT 58.698 41.667 0.00 0.00 35.55 3.55
147 148 4.693095 GGCTTAGACCTCTTCTGAAAACTG 59.307 45.833 0.00 0.00 35.55 3.16
148 149 4.348168 TGGCTTAGACCTCTTCTGAAAACT 59.652 41.667 0.00 0.00 35.55 2.66
149 150 4.642429 TGGCTTAGACCTCTTCTGAAAAC 58.358 43.478 0.00 0.00 35.55 2.43
150 151 4.593206 TCTGGCTTAGACCTCTTCTGAAAA 59.407 41.667 0.00 0.00 35.55 2.29
151 152 4.160329 TCTGGCTTAGACCTCTTCTGAAA 58.840 43.478 0.00 0.00 35.55 2.69
152 153 3.779444 TCTGGCTTAGACCTCTTCTGAA 58.221 45.455 0.00 0.00 35.55 3.02
153 154 3.458044 TCTGGCTTAGACCTCTTCTGA 57.542 47.619 0.00 0.00 35.55 3.27
169 170 1.515088 CACGCTGCTAGACGTCTGG 60.515 63.158 28.12 25.65 41.32 3.86
170 171 1.515088 CCACGCTGCTAGACGTCTG 60.515 63.158 28.12 17.79 41.32 3.51
171 172 1.674651 TCCACGCTGCTAGACGTCT 60.675 57.895 23.66 23.66 41.32 4.18
172 173 1.514443 GTCCACGCTGCTAGACGTC 60.514 63.158 7.70 7.70 41.32 4.34
173 174 2.265904 TGTCCACGCTGCTAGACGT 61.266 57.895 0.00 0.00 44.75 4.34
174 175 1.801913 GTGTCCACGCTGCTAGACG 60.802 63.158 0.00 0.00 31.75 4.18
175 176 0.108615 ATGTGTCCACGCTGCTAGAC 60.109 55.000 0.00 2.45 0.00 2.59
176 177 0.173481 GATGTGTCCACGCTGCTAGA 59.827 55.000 0.00 0.00 0.00 2.43
177 178 0.807667 GGATGTGTCCACGCTGCTAG 60.808 60.000 0.00 0.00 44.42 3.42
178 179 1.218047 GGATGTGTCCACGCTGCTA 59.782 57.895 0.00 0.00 44.42 3.49
179 180 2.046892 GGATGTGTCCACGCTGCT 60.047 61.111 0.00 0.00 44.42 4.24
187 188 1.250840 GGGCCAGTTTGGATGTGTCC 61.251 60.000 4.39 0.00 40.96 4.02
188 189 0.251341 AGGGCCAGTTTGGATGTGTC 60.251 55.000 6.18 0.00 40.96 3.67
189 190 0.251341 GAGGGCCAGTTTGGATGTGT 60.251 55.000 6.18 0.00 40.96 3.72
190 191 0.251297 TGAGGGCCAGTTTGGATGTG 60.251 55.000 6.18 0.00 40.96 3.21
191 192 0.482446 TTGAGGGCCAGTTTGGATGT 59.518 50.000 6.18 0.00 40.96 3.06
192 193 1.856629 ATTGAGGGCCAGTTTGGATG 58.143 50.000 6.18 0.00 40.96 3.51
193 194 3.052642 ACATATTGAGGGCCAGTTTGGAT 60.053 43.478 6.18 0.00 40.96 3.41
194 195 2.311542 ACATATTGAGGGCCAGTTTGGA 59.688 45.455 6.18 0.00 40.96 3.53
195 196 2.428171 CACATATTGAGGGCCAGTTTGG 59.572 50.000 6.18 0.00 41.55 3.28
196 197 3.129287 GTCACATATTGAGGGCCAGTTTG 59.871 47.826 6.18 0.00 33.71 2.93
197 198 3.245229 TGTCACATATTGAGGGCCAGTTT 60.245 43.478 6.18 0.00 33.71 2.66
198 199 2.308570 TGTCACATATTGAGGGCCAGTT 59.691 45.455 6.18 0.00 33.71 3.16
199 200 1.915489 TGTCACATATTGAGGGCCAGT 59.085 47.619 6.18 0.00 33.71 4.00
200 201 2.715749 TGTCACATATTGAGGGCCAG 57.284 50.000 6.18 0.00 33.71 4.85
201 202 2.934887 CATGTCACATATTGAGGGCCA 58.065 47.619 6.18 0.00 33.71 5.36
202 203 1.610522 GCATGTCACATATTGAGGGCC 59.389 52.381 0.00 0.00 33.71 5.80
203 204 2.551459 GAGCATGTCACATATTGAGGGC 59.449 50.000 0.00 0.00 33.71 5.19
204 205 3.144506 GGAGCATGTCACATATTGAGGG 58.855 50.000 0.00 0.00 33.71 4.30
205 206 3.813724 CAGGAGCATGTCACATATTGAGG 59.186 47.826 0.00 0.00 33.71 3.86
206 207 3.813724 CCAGGAGCATGTCACATATTGAG 59.186 47.826 0.00 0.00 33.71 3.02
207 208 3.434024 CCCAGGAGCATGTCACATATTGA 60.434 47.826 0.00 0.00 0.00 2.57
208 209 2.882761 CCCAGGAGCATGTCACATATTG 59.117 50.000 0.00 0.00 0.00 1.90
230 231 8.225416 TCAAAGCATACTCTCCTACTATAAGGA 58.775 37.037 0.00 0.00 43.58 3.36
238 239 6.818644 TCATTTGTCAAAGCATACTCTCCTAC 59.181 38.462 4.03 0.00 0.00 3.18
257 258 9.961265 ATCAATATGTGTAGCTTTGATCATTTG 57.039 29.630 0.00 0.00 33.00 2.32
264 265 8.046708 ACTTACCATCAATATGTGTAGCTTTGA 58.953 33.333 0.00 0.00 0.00 2.69
269 270 9.197694 CTCTTACTTACCATCAATATGTGTAGC 57.802 37.037 0.00 0.00 0.00 3.58
292 293 8.980832 ACCTAACTTTATCATCATATCCCTCT 57.019 34.615 0.00 0.00 0.00 3.69
301 305 6.931838 ACTCGTTGACCTAACTTTATCATCA 58.068 36.000 0.00 0.00 37.13 3.07
312 316 5.125097 GGTCTCTATGAACTCGTTGACCTAA 59.875 44.000 0.00 0.00 39.47 2.69
346 350 2.169832 AAATGAGTGTGGACGTCTGG 57.830 50.000 16.46 0.00 0.00 3.86
350 354 3.738982 TGATGAAAATGAGTGTGGACGT 58.261 40.909 0.00 0.00 0.00 4.34
352 356 5.183713 TGGATTGATGAAAATGAGTGTGGAC 59.816 40.000 0.00 0.00 0.00 4.02
357 361 8.194769 TCATTCATGGATTGATGAAAATGAGTG 58.805 33.333 0.00 0.00 43.77 3.51
358 362 8.301252 TCATTCATGGATTGATGAAAATGAGT 57.699 30.769 0.00 0.00 43.77 3.41
359 363 8.414003 ACTCATTCATGGATTGATGAAAATGAG 58.586 33.333 17.89 17.89 45.15 2.90
383 401 3.138468 AGAGGTCCAACTAGCCAAAAACT 59.862 43.478 0.00 0.00 0.00 2.66
416 434 8.515414 ACATAGAAGACAAGAAGCAAATAAACC 58.485 33.333 0.00 0.00 0.00 3.27
419 437 9.283768 TCAACATAGAAGACAAGAAGCAAATAA 57.716 29.630 0.00 0.00 0.00 1.40
517 536 3.904800 TCCAACTCACTCAACAACTCA 57.095 42.857 0.00 0.00 0.00 3.41
522 541 5.913137 ACAAAAATCCAACTCACTCAACA 57.087 34.783 0.00 0.00 0.00 3.33
528 547 6.039382 AGGTAGTCAACAAAAATCCAACTCAC 59.961 38.462 0.00 0.00 0.00 3.51
529 548 6.126409 AGGTAGTCAACAAAAATCCAACTCA 58.874 36.000 0.00 0.00 0.00 3.41
537 556 8.421002 ACAATGCTTAAGGTAGTCAACAAAAAT 58.579 29.630 4.29 0.00 0.00 1.82
548 567 4.396166 CCCAGTCAACAATGCTTAAGGTAG 59.604 45.833 4.29 0.00 0.00 3.18
558 577 3.004734 GTCTTCCAACCCAGTCAACAATG 59.995 47.826 0.00 0.00 0.00 2.82
559 578 3.222603 GTCTTCCAACCCAGTCAACAAT 58.777 45.455 0.00 0.00 0.00 2.71
570 589 9.921637 TTCATAAATACAAATTGTCTTCCAACC 57.078 29.630 0.22 0.00 35.44 3.77
690 890 0.475044 ACCGGGTGTGGTTAATGTGT 59.525 50.000 6.32 0.00 39.99 3.72
709 909 2.964925 GACGGCAGCGTTGTGACA 60.965 61.111 0.00 0.00 0.00 3.58
808 1008 2.200955 GAAGGTGGGGAGAAAGGAGAT 58.799 52.381 0.00 0.00 0.00 2.75
987 1188 1.604755 AGACTCATAGATGACGACGCC 59.395 52.381 0.00 0.00 32.50 5.68
1178 1379 0.035820 GGTTTCTACATCGGCCACCA 60.036 55.000 2.24 0.00 0.00 4.17
1233 1434 1.601903 GCCCAACAATCATATTCGCGA 59.398 47.619 3.71 3.71 0.00 5.87
1256 1457 2.723746 CGCACAGCCAAAGCAACT 59.276 55.556 0.00 0.00 43.56 3.16
1347 1548 1.347221 CGCGCCACTCGGATAAAAC 59.653 57.895 0.00 0.00 38.94 2.43
1395 1596 2.860136 GCAAGCAAAACAGAAACCTCAC 59.140 45.455 0.00 0.00 0.00 3.51
1396 1597 2.495270 TGCAAGCAAAACAGAAACCTCA 59.505 40.909 0.00 0.00 0.00 3.86
1409 1610 2.553602 CCTGTCACTACATTGCAAGCAA 59.446 45.455 10.19 10.19 40.47 3.91
1430 1631 1.665679 CACGCACATACAGGAATCCAC 59.334 52.381 0.61 0.00 0.00 4.02
1438 1639 2.617250 AATGTTGCACGCACATACAG 57.383 45.000 3.01 0.00 0.00 2.74
1444 1645 1.268113 CCGTCAAATGTTGCACGCAC 61.268 55.000 0.00 0.00 34.88 5.34
1466 1667 8.897752 CAAACCCTAGATAAGAAAAATCTCCTG 58.102 37.037 0.00 0.00 35.36 3.86
1508 1709 7.281324 TCACTGCTAACTTGCTAAGTAAACAAA 59.719 33.333 2.60 0.00 41.91 2.83
1597 1798 4.733165 AGCCGTATGATAGGTGGTAACTA 58.267 43.478 0.00 0.00 37.61 2.24
1599 1800 4.332428 AAGCCGTATGATAGGTGGTAAC 57.668 45.455 0.00 0.00 0.00 2.50
1600 1801 4.652421 AGAAAGCCGTATGATAGGTGGTAA 59.348 41.667 0.00 0.00 0.00 2.85
1601 1802 4.220724 AGAAAGCCGTATGATAGGTGGTA 58.779 43.478 0.00 0.00 0.00 3.25
1602 1803 3.039011 AGAAAGCCGTATGATAGGTGGT 58.961 45.455 0.00 0.00 0.00 4.16
1603 1804 3.753294 AGAAAGCCGTATGATAGGTGG 57.247 47.619 0.00 0.00 0.00 4.61
1604 1805 5.844004 AGTTAGAAAGCCGTATGATAGGTG 58.156 41.667 0.00 0.00 0.00 4.00
1605 1806 5.010820 GGAGTTAGAAAGCCGTATGATAGGT 59.989 44.000 0.00 0.00 0.00 3.08
1607 1808 5.921408 GTGGAGTTAGAAAGCCGTATGATAG 59.079 44.000 0.00 0.00 0.00 2.08
1608 1809 5.597182 AGTGGAGTTAGAAAGCCGTATGATA 59.403 40.000 0.00 0.00 0.00 2.15
1609 1810 4.406003 AGTGGAGTTAGAAAGCCGTATGAT 59.594 41.667 0.00 0.00 0.00 2.45
1610 1811 3.767673 AGTGGAGTTAGAAAGCCGTATGA 59.232 43.478 0.00 0.00 0.00 2.15
1611 1812 4.124851 AGTGGAGTTAGAAAGCCGTATG 57.875 45.455 0.00 0.00 0.00 2.39
1612 1813 4.466726 AGAAGTGGAGTTAGAAAGCCGTAT 59.533 41.667 0.00 0.00 0.00 3.06
1613 1814 3.830755 AGAAGTGGAGTTAGAAAGCCGTA 59.169 43.478 0.00 0.00 0.00 4.02
1614 1815 2.633481 AGAAGTGGAGTTAGAAAGCCGT 59.367 45.455 0.00 0.00 0.00 5.68
1615 1816 3.320673 AGAAGTGGAGTTAGAAAGCCG 57.679 47.619 0.00 0.00 0.00 5.52
1616 1817 6.263392 AGAAAAAGAAGTGGAGTTAGAAAGCC 59.737 38.462 0.00 0.00 0.00 4.35
1617 1818 7.135467 CAGAAAAAGAAGTGGAGTTAGAAAGC 58.865 38.462 0.00 0.00 0.00 3.51
1618 1819 7.283354 ACCAGAAAAAGAAGTGGAGTTAGAAAG 59.717 37.037 0.00 0.00 33.95 2.62
1619 1820 7.116736 ACCAGAAAAAGAAGTGGAGTTAGAAA 58.883 34.615 0.00 0.00 33.95 2.52
1620 1821 6.659824 ACCAGAAAAAGAAGTGGAGTTAGAA 58.340 36.000 0.00 0.00 33.95 2.10
1621 1822 6.248569 ACCAGAAAAAGAAGTGGAGTTAGA 57.751 37.500 0.00 0.00 33.95 2.10
1622 1823 5.177696 CGACCAGAAAAAGAAGTGGAGTTAG 59.822 44.000 0.00 0.00 33.95 2.34
1623 1824 5.054477 CGACCAGAAAAAGAAGTGGAGTTA 58.946 41.667 0.00 0.00 33.95 2.24
1624 1825 3.877508 CGACCAGAAAAAGAAGTGGAGTT 59.122 43.478 0.00 0.00 33.95 3.01
1625 1826 3.118371 ACGACCAGAAAAAGAAGTGGAGT 60.118 43.478 0.00 0.00 33.95 3.85
1626 1827 3.467803 ACGACCAGAAAAAGAAGTGGAG 58.532 45.455 0.00 0.00 33.95 3.86
1627 1828 3.553828 ACGACCAGAAAAAGAAGTGGA 57.446 42.857 0.00 0.00 33.95 4.02
1628 1829 3.003378 GGAACGACCAGAAAAAGAAGTGG 59.997 47.826 0.00 0.00 38.79 4.00
1629 1830 4.210832 GGAACGACCAGAAAAAGAAGTG 57.789 45.455 0.00 0.00 38.79 3.16
1651 1852 0.952280 TACCATCGATCCGACAGAGC 59.048 55.000 0.00 0.00 39.18 4.09
1652 1853 2.222886 ACTACCATCGATCCGACAGAG 58.777 52.381 0.00 0.00 39.18 3.35
1653 1854 2.158798 AGACTACCATCGATCCGACAGA 60.159 50.000 0.00 0.00 39.18 3.41
1654 1855 2.222886 AGACTACCATCGATCCGACAG 58.777 52.381 0.00 0.00 39.18 3.51
1655 1856 2.219458 GAGACTACCATCGATCCGACA 58.781 52.381 0.00 0.00 39.18 4.35
1656 1857 2.219458 TGAGACTACCATCGATCCGAC 58.781 52.381 0.00 0.00 39.18 4.79
1657 1858 2.104281 TCTGAGACTACCATCGATCCGA 59.896 50.000 0.00 0.00 41.13 4.55
1658 1859 2.482336 CTCTGAGACTACCATCGATCCG 59.518 54.545 0.00 0.00 0.00 4.18
1659 1860 3.745799 TCTCTGAGACTACCATCGATCC 58.254 50.000 2.58 0.00 0.00 3.36
1660 1861 5.122239 CAGATCTCTGAGACTACCATCGATC 59.878 48.000 10.00 0.00 46.59 3.69
1661 1862 5.003160 CAGATCTCTGAGACTACCATCGAT 58.997 45.833 10.00 0.00 46.59 3.59
1662 1863 4.384940 CAGATCTCTGAGACTACCATCGA 58.615 47.826 10.00 0.00 46.59 3.59
1663 1864 3.501828 CCAGATCTCTGAGACTACCATCG 59.498 52.174 10.00 0.24 46.59 3.84
1664 1865 4.469657 ACCAGATCTCTGAGACTACCATC 58.530 47.826 10.00 2.57 46.59 3.51
1665 1866 4.534647 ACCAGATCTCTGAGACTACCAT 57.465 45.455 10.00 0.00 46.59 3.55
1666 1867 5.194432 GTTACCAGATCTCTGAGACTACCA 58.806 45.833 10.00 0.00 46.59 3.25
1667 1868 4.581409 GGTTACCAGATCTCTGAGACTACC 59.419 50.000 10.00 9.51 46.59 3.18
1668 1869 5.442391 AGGTTACCAGATCTCTGAGACTAC 58.558 45.833 10.00 5.02 46.59 2.73
1669 1870 5.398126 GGAGGTTACCAGATCTCTGAGACTA 60.398 48.000 10.00 0.00 46.59 2.59
1670 1871 4.532834 GAGGTTACCAGATCTCTGAGACT 58.467 47.826 10.00 6.73 46.59 3.24
1671 1872 3.634910 GGAGGTTACCAGATCTCTGAGAC 59.365 52.174 10.00 4.48 46.59 3.36
1672 1873 3.685835 CGGAGGTTACCAGATCTCTGAGA 60.686 52.174 10.23 10.23 46.59 3.27
1673 1874 2.621055 CGGAGGTTACCAGATCTCTGAG 59.379 54.545 3.51 0.00 46.59 3.35
1674 1875 2.241430 TCGGAGGTTACCAGATCTCTGA 59.759 50.000 3.51 0.00 46.59 3.27
1675 1876 2.359531 GTCGGAGGTTACCAGATCTCTG 59.640 54.545 3.51 0.00 43.40 3.35
1676 1877 2.242708 AGTCGGAGGTTACCAGATCTCT 59.757 50.000 3.51 0.00 0.00 3.10
1677 1878 2.657143 AGTCGGAGGTTACCAGATCTC 58.343 52.381 3.51 0.00 0.00 2.75
1678 1879 2.830651 AGTCGGAGGTTACCAGATCT 57.169 50.000 3.51 0.00 0.00 2.75
1679 1880 3.889520 AAAGTCGGAGGTTACCAGATC 57.110 47.619 3.51 0.00 0.00 2.75
1680 1881 4.635699 AAAAAGTCGGAGGTTACCAGAT 57.364 40.909 3.51 0.00 0.00 2.90
1703 1904 8.887717 GCACAGAGTAATCTAATTGAATCTGTT 58.112 33.333 1.45 0.00 42.47 3.16
1704 1905 7.497249 GGCACAGAGTAATCTAATTGAATCTGT 59.503 37.037 0.00 0.00 45.09 3.41
1705 1906 7.714377 AGGCACAGAGTAATCTAATTGAATCTG 59.286 37.037 0.00 0.00 39.02 2.90
1706 1907 7.800092 AGGCACAGAGTAATCTAATTGAATCT 58.200 34.615 0.00 0.00 0.00 2.40
1707 1908 8.443953 AAGGCACAGAGTAATCTAATTGAATC 57.556 34.615 0.00 0.00 0.00 2.52
1708 1909 9.331282 GTAAGGCACAGAGTAATCTAATTGAAT 57.669 33.333 0.00 0.00 0.00 2.57
1709 1910 8.318412 TGTAAGGCACAGAGTAATCTAATTGAA 58.682 33.333 0.00 0.00 31.89 2.69
1710 1911 7.847096 TGTAAGGCACAGAGTAATCTAATTGA 58.153 34.615 0.00 0.00 31.89 2.57
1796 1997 6.517605 AGCTAGGCTTAACAGCTTATAAGAC 58.482 40.000 16.85 13.89 42.95 3.01
1911 2112 1.188219 AGTGCCTGTGACTGATCGGT 61.188 55.000 6.97 6.97 0.00 4.69
2226 2428 6.732531 TCTTTCTCAACACAGCATTATCTG 57.267 37.500 0.00 0.00 39.86 2.90
2227 2429 7.065563 GTGATCTTTCTCAACACAGCATTATCT 59.934 37.037 0.00 0.00 0.00 1.98
2253 2455 9.135843 TGTAGTACAGAATCTACAAACAAATCG 57.864 33.333 0.00 0.00 41.96 3.34
2420 2622 3.889815 AGAGCTGCTAATGGTTAATGCA 58.110 40.909 0.15 0.00 0.00 3.96
2441 2643 6.128007 GCTGCTAAATTACTTTGCAGAACCTA 60.128 38.462 22.20 0.00 42.58 3.08
2479 2682 7.587757 CAGAACTATCAAAAACTAGTGCACAAC 59.412 37.037 21.04 0.00 0.00 3.32
2490 2700 8.831550 ACTTGAGTCTTCAGAACTATCAAAAAC 58.168 33.333 0.00 0.00 34.15 2.43
2505 2715 9.617975 CAAATGAAGGAAATAACTTGAGTCTTC 57.382 33.333 0.00 0.00 0.00 2.87
2681 2897 6.712998 TGCTTTTAAACATACTGCACTCCTAA 59.287 34.615 0.00 0.00 0.00 2.69
2685 2901 6.002062 ACTGCTTTTAAACATACTGCACTC 57.998 37.500 0.00 0.00 0.00 3.51
3116 3366 6.096846 GCCCCAGTATTCAGAAAAACATATGT 59.903 38.462 1.41 1.41 0.00 2.29
3589 3929 1.001633 TGAAACGGAGGGAGTACTTGC 59.998 52.381 0.00 0.00 0.00 4.01
3590 3930 3.396260 TTGAAACGGAGGGAGTACTTG 57.604 47.619 0.00 0.00 0.00 3.16
3606 4117 7.313646 TGTCGTGGTTTTAGTTCAAATTTGAA 58.686 30.769 26.01 26.01 44.31 2.69
3608 4119 7.274686 ACTTGTCGTGGTTTTAGTTCAAATTTG 59.725 33.333 12.15 12.15 0.00 2.32
3611 4122 6.445357 ACTTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
3616 4127 7.067251 TCCAAATTACTTGTCGTGGTTTTAGTT 59.933 33.333 0.00 0.00 32.65 2.24
3622 4133 5.278758 CCATTCCAAATTACTTGTCGTGGTT 60.279 40.000 0.00 0.00 32.65 3.67
3625 4136 5.391950 CCTCCATTCCAAATTACTTGTCGTG 60.392 44.000 0.00 0.00 32.65 4.35
3626 4137 4.700213 CCTCCATTCCAAATTACTTGTCGT 59.300 41.667 0.00 0.00 32.65 4.34
3627 4138 4.096382 CCCTCCATTCCAAATTACTTGTCG 59.904 45.833 0.00 0.00 32.65 4.35
3630 4141 5.264395 ACTCCCTCCATTCCAAATTACTTG 58.736 41.667 0.00 0.00 34.52 3.16
3632 4143 6.848562 ATACTCCCTCCATTCCAAATTACT 57.151 37.500 0.00 0.00 0.00 2.24
3659 4170 9.778741 CTAACTCCAGAAACCAGCAATATATAA 57.221 33.333 0.00 0.00 0.00 0.98
3738 4430 3.633986 GCTGGTATCTTGCCAAGCTTAAT 59.366 43.478 0.00 0.00 35.32 1.40
3740 4432 2.026356 TGCTGGTATCTTGCCAAGCTTA 60.026 45.455 0.00 0.00 35.32 3.09
3887 4579 1.133699 CCCTTATGCAATCAGGCTGGA 60.134 52.381 15.73 1.60 36.36 3.86
3891 4583 1.035139 CCACCCTTATGCAATCAGGC 58.965 55.000 0.00 0.00 36.36 4.85
3993 4686 1.398958 GGTTTGTCCCAGCCAAAGCA 61.399 55.000 9.44 0.00 45.13 3.91
4277 4979 6.752168 TGTTAGTGGTTAACTGTAGAAGTCC 58.248 40.000 5.42 0.00 41.82 3.85
4597 5477 6.073222 ACCAAAGAAAAGCACTTACATACTCG 60.073 38.462 0.00 0.00 0.00 4.18
4623 5503 0.386476 AGTGTGTGCCAAACATGCTG 59.614 50.000 0.00 0.00 41.97 4.41
4808 5688 4.099573 ACGGGTGATGGACAAATCTACTAG 59.900 45.833 0.00 0.00 0.00 2.57
5336 6217 1.808945 AGTGCAGTGCTAAGCAACATC 59.191 47.619 17.60 0.00 43.20 3.06
5356 6237 1.000283 ACGAAATGGCGATGGCAAAAA 60.000 42.857 1.01 0.00 42.43 1.94
5374 6255 2.635443 GGGTTGCCCACATTCCACG 61.635 63.158 0.00 0.00 44.65 4.94
5430 6311 4.422073 TTCCATCACCACTGGATCATAC 57.578 45.455 0.71 0.00 42.26 2.39
5537 6422 7.976734 GCACTATAGGCTACACTATAAAGGATG 59.023 40.741 4.43 0.00 35.96 3.51
5559 6444 2.679837 CTGCGGAAATGTATGAAGCACT 59.320 45.455 0.00 0.00 0.00 4.40
5688 6573 1.599047 CTGTGGGCGAGAACTGGAT 59.401 57.895 0.00 0.00 0.00 3.41
5757 6642 2.607187 GTGATCGTGGAATCAACGTCT 58.393 47.619 10.22 0.00 37.41 4.18
5763 6648 1.559219 ACATGGGTGATCGTGGAATCA 59.441 47.619 0.00 0.00 33.30 2.57
5802 6687 0.748005 CCCAACGGGCCTTATCTGTG 60.748 60.000 0.84 0.00 35.35 3.66
6076 6967 6.425504 CAGCAACATCGATTTCTTTATCCTC 58.574 40.000 0.00 0.00 0.00 3.71
6089 6980 1.293963 GACAGCAGCAGCAACATCGA 61.294 55.000 3.17 0.00 45.49 3.59
6112 7003 9.297586 GTGTGTATCTTATGAGTTCGTTGAATA 57.702 33.333 0.00 0.00 0.00 1.75
6201 7092 2.368548 TGAGCTTTCTGTTCCACTGCTA 59.631 45.455 0.00 0.00 0.00 3.49
6234 7125 2.424601 ACAATGGATCAGCGAAACCATG 59.575 45.455 15.20 12.81 41.47 3.66
6273 7165 0.685097 AGACCAGCTGCCGAACTTTA 59.315 50.000 8.66 0.00 0.00 1.85
6274 7166 0.886490 CAGACCAGCTGCCGAACTTT 60.886 55.000 8.66 0.00 37.90 2.66
6336 7228 3.323403 CCATTTTGGTGCCCTAAAACAGA 59.677 43.478 0.00 0.00 32.73 3.41
6487 7385 5.136828 TGGGTTGATTCAAGACAAGCTTAA 58.863 37.500 0.00 0.00 41.96 1.85
6488 7386 4.724399 TGGGTTGATTCAAGACAAGCTTA 58.276 39.130 0.00 0.00 41.96 3.09
6489 7387 3.565307 TGGGTTGATTCAAGACAAGCTT 58.435 40.909 0.00 0.00 41.96 3.74
6490 7388 3.228188 TGGGTTGATTCAAGACAAGCT 57.772 42.857 0.00 0.00 41.96 3.74
6491 7389 4.320608 TTTGGGTTGATTCAAGACAAGC 57.679 40.909 12.63 0.00 41.69 4.01
6499 7397 8.792830 TGTTATTTTTGTTTTGGGTTGATTCA 57.207 26.923 0.00 0.00 0.00 2.57
6602 7500 9.549509 CTTTATTGTATTGTGCGCTAAACTTTA 57.450 29.630 9.73 0.00 0.00 1.85
6613 7511 7.312154 TGTGGATGAACTTTATTGTATTGTGC 58.688 34.615 0.00 0.00 0.00 4.57
6648 7549 3.570550 ACGTCCTAGTTCCATCTCTATGC 59.429 47.826 0.00 0.00 0.00 3.14
6659 7560 1.154197 GGGCAACAACGTCCTAGTTC 58.846 55.000 0.00 0.00 39.74 3.01
6676 7578 0.683828 TGTTGTAGGCATGGCATGGG 60.684 55.000 27.48 4.98 0.00 4.00
6685 7587 5.534278 TCAAAAAGATGTCATGTTGTAGGCA 59.466 36.000 0.00 0.00 0.00 4.75
6686 7588 6.012658 TCAAAAAGATGTCATGTTGTAGGC 57.987 37.500 0.00 0.00 0.00 3.93
6717 7619 7.473366 TGACATTAGAGAGTCTGAAACGTATC 58.527 38.462 0.00 0.00 35.81 2.24
6724 7626 6.663523 TGTACCATGACATTAGAGAGTCTGAA 59.336 38.462 0.00 0.00 35.81 3.02
6753 7655 6.311200 GCAAGACCGAATTCAATGCTTTATTT 59.689 34.615 6.22 0.00 31.43 1.40
6762 7664 3.441572 CAGAAGGCAAGACCGAATTCAAT 59.558 43.478 6.22 0.00 46.52 2.57
6796 7698 4.513442 TCTATCACCTCATTGGAAAACCG 58.487 43.478 0.00 0.00 39.71 4.44
6805 7707 6.386927 TGGATTACACCTTCTATCACCTCATT 59.613 38.462 0.00 0.00 0.00 2.57
6837 7739 5.748402 TGATCACTAAGAACAAGCATGGAT 58.252 37.500 0.00 0.00 0.00 3.41
6902 7962 3.719268 TTGCTATTGTGTGAGGACCAT 57.281 42.857 0.00 0.00 0.00 3.55
6903 7963 3.500448 TTTGCTATTGTGTGAGGACCA 57.500 42.857 0.00 0.00 0.00 4.02
6950 8444 2.028190 CTAGGACAGATGCGCGGG 59.972 66.667 8.83 0.00 0.00 6.13
6952 8446 2.659897 GGCTAGGACAGATGCGCG 60.660 66.667 0.00 0.00 0.00 6.86
6957 8451 3.917760 GCGGCGGCTAGGACAGAT 61.918 66.667 9.78 0.00 35.83 2.90
7030 8524 8.350722 TGGATGTACGTATTCAATACTCTCTTC 58.649 37.037 5.99 3.98 33.59 2.87
7035 8529 8.009974 GCAAATGGATGTACGTATTCAATACTC 58.990 37.037 5.99 0.00 33.59 2.59
7041 8535 5.065859 CCAAGCAAATGGATGTACGTATTCA 59.934 40.000 0.00 0.00 43.54 2.57
7042 8536 5.295787 TCCAAGCAAATGGATGTACGTATTC 59.704 40.000 0.00 0.00 44.52 1.75
7045 8539 4.209307 TCCAAGCAAATGGATGTACGTA 57.791 40.909 2.11 0.00 44.52 3.57
7046 8540 3.066291 TCCAAGCAAATGGATGTACGT 57.934 42.857 0.00 0.00 44.52 3.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.