Multiple sequence alignment - TraesCS2A01G292500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G292500 chr2A 100.000 2288 0 0 1 2288 504065941 504068228 0.000000e+00 4226.0
1 TraesCS2A01G292500 chr2A 80.843 261 38 7 2034 2285 568323525 568323782 6.450000e-46 195.0
2 TraesCS2A01G292500 chr6D 92.032 1732 129 5 1 1725 450905950 450907679 0.000000e+00 2425.0
3 TraesCS2A01G292500 chr6D 92.298 1636 115 4 1 1632 305745355 305746983 0.000000e+00 2313.0
4 TraesCS2A01G292500 chr6D 83.333 252 33 7 2040 2288 148796221 148796466 8.230000e-55 224.0
5 TraesCS2A01G292500 chr6D 81.641 256 40 5 2040 2288 472759058 472758803 2.980000e-49 206.0
6 TraesCS2A01G292500 chr7B 91.801 1732 130 10 1 1725 150842102 150843828 0.000000e+00 2401.0
7 TraesCS2A01G292500 chr7B 90.659 182 15 2 1861 2041 394403647 394403467 8.170000e-60 241.0
8 TraesCS2A01G292500 chr7B 90.659 182 13 3 1860 2038 38967924 38968104 2.940000e-59 239.0
9 TraesCS2A01G292500 chr7B 87.634 186 13 6 1861 2038 89779250 89779067 8.280000e-50 207.0
10 TraesCS2A01G292500 chr4B 91.537 1737 133 9 1 1725 551784703 551786437 0.000000e+00 2381.0
11 TraesCS2A01G292500 chr4B 91.077 1737 141 11 1 1725 551730095 551731829 0.000000e+00 2337.0
12 TraesCS2A01G292500 chr4B 81.818 209 35 2 2080 2288 471310572 471310777 3.020000e-39 172.0
13 TraesCS2A01G292500 chr7D 91.134 1737 140 10 1 1725 463975839 463974105 0.000000e+00 2342.0
14 TraesCS2A01G292500 chr7D 90.550 1746 146 13 1 1729 107722780 107721037 0.000000e+00 2292.0
15 TraesCS2A01G292500 chr7D 81.429 210 37 2 2080 2288 398042379 398042587 1.090000e-38 171.0
16 TraesCS2A01G292500 chr7D 88.000 75 6 3 1781 1855 169907992 169907921 4.050000e-13 86.1
17 TraesCS2A01G292500 chr4A 90.657 1734 151 8 1 1729 19185951 19184224 0.000000e+00 2294.0
18 TraesCS2A01G292500 chr4A 88.158 76 6 3 1780 1855 468598828 468598900 1.130000e-13 87.9
19 TraesCS2A01G292500 chr4A 87.143 70 7 2 1784 1851 604669735 604669666 6.780000e-11 78.7
20 TraesCS2A01G292500 chr2B 90.132 1743 151 13 1 1729 459481033 459479298 0.000000e+00 2246.0
21 TraesCS2A01G292500 chr2B 96.000 75 3 0 1859 1933 334438229 334438303 3.090000e-24 122.0
22 TraesCS2A01G292500 chr2B 89.610 77 5 3 1781 1856 61495595 61495669 6.730000e-16 95.3
23 TraesCS2A01G292500 chr3A 92.021 188 12 2 1859 2045 400411363 400411178 6.270000e-66 261.0
24 TraesCS2A01G292500 chr3A 82.625 259 34 8 2040 2288 171213747 171213490 3.830000e-53 219.0
25 TraesCS2A01G292500 chr3A 89.535 86 5 4 1778 1863 688985533 688985452 3.110000e-19 106.0
26 TraesCS2A01G292500 chr3D 83.922 255 35 3 2040 2288 101551288 101551034 2.940000e-59 239.0
27 TraesCS2A01G292500 chr3D 86.792 53 6 1 1791 1843 43593641 43593590 8.830000e-05 58.4
28 TraesCS2A01G292500 chr1B 90.110 182 15 2 1860 2038 664809715 664809534 1.370000e-57 233.0
29 TraesCS2A01G292500 chr5B 87.895 190 15 4 1859 2045 680284343 680284527 1.380000e-52 217.0
30 TraesCS2A01G292500 chr4D 82.031 256 38 4 2040 2288 333015535 333015789 6.400000e-51 211.0
31 TraesCS2A01G292500 chr1D 94.074 135 7 1 1904 2038 191375391 191375258 1.070000e-48 204.0
32 TraesCS2A01G292500 chr1D 84.211 190 24 4 1861 2045 480382177 480382365 1.810000e-41 180.0
33 TraesCS2A01G292500 chrUn 80.377 265 41 6 2034 2288 75831587 75831850 8.340000e-45 191.0
34 TraesCS2A01G292500 chrUn 84.259 108 10 4 2040 2140 155228015 155227908 5.200000e-17 99.0
35 TraesCS2A01G292500 chr6B 82.673 202 33 2 2087 2288 538945081 538945280 6.500000e-41 178.0
36 TraesCS2A01G292500 chr6B 78.906 256 36 10 2040 2288 10454232 10454476 8.460000e-35 158.0
37 TraesCS2A01G292500 chr6B 78.161 261 40 10 2038 2288 9789032 9789285 1.420000e-32 150.0
38 TraesCS2A01G292500 chr6B 78.125 256 38 7 2040 2288 10583989 10584233 1.830000e-31 147.0
39 TraesCS2A01G292500 chr6B 76.953 256 41 7 2040 2288 10519673 10519917 1.840000e-26 130.0
40 TraesCS2A01G292500 chr6B 91.463 82 4 3 1774 1855 517415558 517415480 2.400000e-20 110.0
41 TraesCS2A01G292500 chr1A 87.097 155 19 1 1867 2021 267354133 267354286 8.400000e-40 174.0
42 TraesCS2A01G292500 chr1A 90.000 80 5 3 1785 1863 355341224 355341301 1.450000e-17 100.0
43 TraesCS2A01G292500 chr3B 78.788 264 46 6 2034 2288 30070295 30070557 3.910000e-38 169.0
44 TraesCS2A01G292500 chr7A 97.674 43 0 1 1816 1858 650861999 650861958 3.150000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G292500 chr2A 504065941 504068228 2287 False 4226 4226 100.000 1 2288 1 chr2A.!!$F1 2287
1 TraesCS2A01G292500 chr6D 450905950 450907679 1729 False 2425 2425 92.032 1 1725 1 chr6D.!!$F3 1724
2 TraesCS2A01G292500 chr6D 305745355 305746983 1628 False 2313 2313 92.298 1 1632 1 chr6D.!!$F2 1631
3 TraesCS2A01G292500 chr7B 150842102 150843828 1726 False 2401 2401 91.801 1 1725 1 chr7B.!!$F2 1724
4 TraesCS2A01G292500 chr4B 551784703 551786437 1734 False 2381 2381 91.537 1 1725 1 chr4B.!!$F3 1724
5 TraesCS2A01G292500 chr4B 551730095 551731829 1734 False 2337 2337 91.077 1 1725 1 chr4B.!!$F2 1724
6 TraesCS2A01G292500 chr7D 463974105 463975839 1734 True 2342 2342 91.134 1 1725 1 chr7D.!!$R3 1724
7 TraesCS2A01G292500 chr7D 107721037 107722780 1743 True 2292 2292 90.550 1 1729 1 chr7D.!!$R1 1728
8 TraesCS2A01G292500 chr4A 19184224 19185951 1727 True 2294 2294 90.657 1 1729 1 chr4A.!!$R1 1728
9 TraesCS2A01G292500 chr2B 459479298 459481033 1735 True 2246 2246 90.132 1 1729 1 chr2B.!!$R1 1728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
770 780 0.330604 AGCAATGAGATGGGCACAGT 59.669 50.0 0.0 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2138 2159 0.030773 ATGGATCGACGATGACACCG 59.969 55.0 16.49 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.205587 GCCTTCATCTTCTTGTCCATCAT 58.794 43.478 0.00 0.00 0.00 2.45
59 60 0.460109 CTTGTCCATCATCGTGCGGA 60.460 55.000 0.00 0.00 0.00 5.54
81 85 4.695231 CGGGTCGTCGTCGCTGTT 62.695 66.667 0.00 0.00 36.96 3.16
110 114 0.669077 GAGGTCGATCTGCCACGTAT 59.331 55.000 0.91 0.00 0.00 3.06
220 224 0.538746 TCGTCTCCCAGTACACTGCA 60.539 55.000 3.75 0.00 42.47 4.41
229 233 2.110006 TACACTGCAGCACGGCAA 59.890 55.556 15.27 0.00 44.40 4.52
255 259 2.339769 AGGAGCCCAGTAGTTCTTGTT 58.660 47.619 0.00 0.00 0.00 2.83
296 300 1.918609 GTTTAGTGTCGTCGGAGATGC 59.081 52.381 0.00 0.00 44.51 3.91
324 328 0.396139 ATGGCCCAGCGAATGATGTT 60.396 50.000 0.00 0.00 0.00 2.71
326 330 1.315257 GGCCCAGCGAATGATGTTGT 61.315 55.000 0.00 0.00 0.00 3.32
330 334 2.079158 CCAGCGAATGATGTTGTCTGT 58.921 47.619 0.00 0.00 0.00 3.41
334 338 4.005650 AGCGAATGATGTTGTCTGTCATT 58.994 39.130 0.00 0.00 43.23 2.57
402 406 1.035932 GCCCTCATGAGCACTGCATT 61.036 55.000 17.76 0.00 0.00 3.56
460 466 2.508526 GAGCACACCTCCATTGTTCTT 58.491 47.619 0.00 0.00 34.35 2.52
490 496 3.626924 GTCACCAGGCGACCACCT 61.627 66.667 0.00 0.00 42.30 4.00
524 530 0.551377 TCCAGCCAATACCCCAAGGA 60.551 55.000 0.00 0.00 36.73 3.36
549 555 2.818169 TTGGCGTTGGAGCTGGAGT 61.818 57.895 0.00 0.00 37.29 3.85
581 587 1.754555 GCGATGGAGAGGAGGAAGGTA 60.755 57.143 0.00 0.00 0.00 3.08
623 631 1.272807 GGTAAGTAGTGGTGGGCAGA 58.727 55.000 0.00 0.00 0.00 4.26
654 662 0.551396 TAGGCACGATGGAGAGGAGA 59.449 55.000 0.00 0.00 0.00 3.71
685 695 4.212636 ACAGTCATGCCGTTTTAACTACAC 59.787 41.667 0.00 0.00 0.00 2.90
718 728 2.158769 AGCCATGAACTCTGTGTTGTGA 60.159 45.455 0.00 0.00 39.30 3.58
726 736 5.105513 TGAACTCTGTGTTGTGACTGACTTA 60.106 40.000 0.00 0.00 39.30 2.24
729 739 7.050970 ACTCTGTGTTGTGACTGACTTAATA 57.949 36.000 0.00 0.00 0.00 0.98
770 780 0.330604 AGCAATGAGATGGGCACAGT 59.669 50.000 0.00 0.00 0.00 3.55
784 794 3.625897 CAGTGGTGCTCCCGGACA 61.626 66.667 0.73 0.00 35.15 4.02
819 829 0.546122 AGCAGCCCGTTCATCCAATA 59.454 50.000 0.00 0.00 0.00 1.90
844 860 4.892965 TTGTGCTGCCGCCCACTT 62.893 61.111 11.21 0.00 34.43 3.16
947 967 2.023015 ACCACTACCATGAGGAGGATGA 60.023 50.000 0.00 0.00 38.69 2.92
960 980 2.040412 GGAGGATGACCCAACTCACTTT 59.960 50.000 0.00 0.00 37.41 2.66
1101 1122 2.350522 GTGACGGTGAAGCTGATGAAT 58.649 47.619 0.00 0.00 0.00 2.57
1106 1127 1.820519 GGTGAAGCTGATGAATGGCAA 59.179 47.619 0.00 0.00 0.00 4.52
1148 1169 2.173669 CCACCTATGCAGCCGTTCG 61.174 63.158 0.00 0.00 0.00 3.95
1252 1273 0.176910 TGAGGTCGTCAACAAGTGCA 59.823 50.000 0.00 0.00 29.64 4.57
1370 1391 4.025229 GCGTTGAACTGTTATGAAGTGTGA 60.025 41.667 0.00 0.00 0.00 3.58
1472 1493 1.671845 GTGCCGAAGTGTGTTGGTAAA 59.328 47.619 0.00 0.00 0.00 2.01
1507 1528 3.486383 CAAAGAGGTTACCACACACCAT 58.514 45.455 3.51 0.00 35.25 3.55
1509 1530 2.054799 AGAGGTTACCACACACCATGT 58.945 47.619 3.51 0.00 44.81 3.21
1584 1605 2.554032 CCAAACATCAGGAAGTGTGGTC 59.446 50.000 5.84 0.00 38.16 4.02
1650 1671 4.707030 CAGATGGTGCATTTTGAAGCTA 57.293 40.909 0.00 0.00 0.00 3.32
1729 1750 1.866471 GCAACCAAACACGCCCTTAAC 60.866 52.381 0.00 0.00 0.00 2.01
1730 1751 1.034356 AACCAAACACGCCCTTAACC 58.966 50.000 0.00 0.00 0.00 2.85
1731 1752 1.167781 ACCAAACACGCCCTTAACCG 61.168 55.000 0.00 0.00 0.00 4.44
1732 1753 0.885596 CCAAACACGCCCTTAACCGA 60.886 55.000 0.00 0.00 0.00 4.69
1733 1754 0.515564 CAAACACGCCCTTAACCGAG 59.484 55.000 0.00 0.00 0.00 4.63
1734 1755 0.393820 AAACACGCCCTTAACCGAGA 59.606 50.000 0.00 0.00 0.00 4.04
1735 1756 0.393820 AACACGCCCTTAACCGAGAA 59.606 50.000 0.00 0.00 0.00 2.87
1736 1757 0.320160 ACACGCCCTTAACCGAGAAC 60.320 55.000 0.00 0.00 0.00 3.01
1737 1758 0.320073 CACGCCCTTAACCGAGAACA 60.320 55.000 0.00 0.00 0.00 3.18
1738 1759 0.037605 ACGCCCTTAACCGAGAACAG 60.038 55.000 0.00 0.00 0.00 3.16
1739 1760 0.739813 CGCCCTTAACCGAGAACAGG 60.740 60.000 0.00 0.00 0.00 4.00
1740 1761 0.392595 GCCCTTAACCGAGAACAGGG 60.393 60.000 0.00 0.00 46.43 4.45
1741 1762 1.272807 CCCTTAACCGAGAACAGGGA 58.727 55.000 0.00 0.00 46.61 4.20
1742 1763 1.066358 CCCTTAACCGAGAACAGGGAC 60.066 57.143 0.00 0.00 46.61 4.46
1743 1764 1.621814 CCTTAACCGAGAACAGGGACA 59.378 52.381 0.00 0.00 0.00 4.02
1744 1765 2.353803 CCTTAACCGAGAACAGGGACAG 60.354 54.545 0.00 0.00 0.00 3.51
1745 1766 2.297698 TAACCGAGAACAGGGACAGA 57.702 50.000 0.00 0.00 0.00 3.41
1746 1767 0.680061 AACCGAGAACAGGGACAGAC 59.320 55.000 0.00 0.00 0.00 3.51
1747 1768 0.469331 ACCGAGAACAGGGACAGACA 60.469 55.000 0.00 0.00 0.00 3.41
1748 1769 0.038159 CCGAGAACAGGGACAGACAC 60.038 60.000 0.00 0.00 0.00 3.67
1749 1770 0.387367 CGAGAACAGGGACAGACACG 60.387 60.000 0.00 0.00 0.00 4.49
1750 1771 0.959553 GAGAACAGGGACAGACACGA 59.040 55.000 0.00 0.00 0.00 4.35
1751 1772 0.962489 AGAACAGGGACAGACACGAG 59.038 55.000 0.00 0.00 0.00 4.18
1752 1773 0.674534 GAACAGGGACAGACACGAGT 59.325 55.000 0.00 0.00 0.00 4.18
1753 1774 1.884579 GAACAGGGACAGACACGAGTA 59.115 52.381 0.00 0.00 0.00 2.59
1754 1775 2.217510 ACAGGGACAGACACGAGTAT 57.782 50.000 0.00 0.00 0.00 2.12
1755 1776 2.093106 ACAGGGACAGACACGAGTATC 58.907 52.381 0.00 0.00 0.00 2.24
1756 1777 2.291024 ACAGGGACAGACACGAGTATCT 60.291 50.000 0.00 0.00 0.00 1.98
1757 1778 3.054582 ACAGGGACAGACACGAGTATCTA 60.055 47.826 0.00 0.00 0.00 1.98
1758 1779 4.138290 CAGGGACAGACACGAGTATCTAT 58.862 47.826 0.00 0.00 0.00 1.98
1759 1780 4.214545 CAGGGACAGACACGAGTATCTATC 59.785 50.000 0.00 0.00 0.00 2.08
1760 1781 4.103469 AGGGACAGACACGAGTATCTATCT 59.897 45.833 0.00 0.00 0.00 1.98
1761 1782 4.453136 GGGACAGACACGAGTATCTATCTC 59.547 50.000 0.00 0.00 0.00 2.75
1762 1783 4.453136 GGACAGACACGAGTATCTATCTCC 59.547 50.000 0.00 0.00 0.00 3.71
1763 1784 5.037383 ACAGACACGAGTATCTATCTCCA 57.963 43.478 0.00 0.00 0.00 3.86
1764 1785 5.626142 ACAGACACGAGTATCTATCTCCAT 58.374 41.667 0.00 0.00 0.00 3.41
1765 1786 5.703592 ACAGACACGAGTATCTATCTCCATC 59.296 44.000 0.00 0.00 0.00 3.51
1766 1787 5.123186 CAGACACGAGTATCTATCTCCATCC 59.877 48.000 0.00 0.00 0.00 3.51
1767 1788 4.337145 ACACGAGTATCTATCTCCATCCC 58.663 47.826 0.00 0.00 0.00 3.85
1768 1789 4.043561 ACACGAGTATCTATCTCCATCCCT 59.956 45.833 0.00 0.00 0.00 4.20
1769 1790 4.638421 CACGAGTATCTATCTCCATCCCTC 59.362 50.000 0.00 0.00 0.00 4.30
1770 1791 4.538490 ACGAGTATCTATCTCCATCCCTCT 59.462 45.833 0.00 0.00 0.00 3.69
1771 1792 5.123227 CGAGTATCTATCTCCATCCCTCTC 58.877 50.000 0.00 0.00 0.00 3.20
1772 1793 5.445964 GAGTATCTATCTCCATCCCTCTCC 58.554 50.000 0.00 0.00 0.00 3.71
1773 1794 5.115322 AGTATCTATCTCCATCCCTCTCCT 58.885 45.833 0.00 0.00 0.00 3.69
1774 1795 5.559545 AGTATCTATCTCCATCCCTCTCCTT 59.440 44.000 0.00 0.00 0.00 3.36
1775 1796 4.841813 TCTATCTCCATCCCTCTCCTTT 57.158 45.455 0.00 0.00 0.00 3.11
1776 1797 5.163259 TCTATCTCCATCCCTCTCCTTTT 57.837 43.478 0.00 0.00 0.00 2.27
1777 1798 4.904251 TCTATCTCCATCCCTCTCCTTTTG 59.096 45.833 0.00 0.00 0.00 2.44
1778 1799 2.921221 TCTCCATCCCTCTCCTTTTGT 58.079 47.619 0.00 0.00 0.00 2.83
1779 1800 3.260205 TCTCCATCCCTCTCCTTTTGTT 58.740 45.455 0.00 0.00 0.00 2.83
1780 1801 3.657727 TCTCCATCCCTCTCCTTTTGTTT 59.342 43.478 0.00 0.00 0.00 2.83
1781 1802 4.106341 TCTCCATCCCTCTCCTTTTGTTTT 59.894 41.667 0.00 0.00 0.00 2.43
1782 1803 4.814967 TCCATCCCTCTCCTTTTGTTTTT 58.185 39.130 0.00 0.00 0.00 1.94
1783 1804 4.588528 TCCATCCCTCTCCTTTTGTTTTTG 59.411 41.667 0.00 0.00 0.00 2.44
1784 1805 4.344968 CCATCCCTCTCCTTTTGTTTTTGT 59.655 41.667 0.00 0.00 0.00 2.83
1785 1806 5.163311 CCATCCCTCTCCTTTTGTTTTTGTT 60.163 40.000 0.00 0.00 0.00 2.83
1786 1807 6.348498 CATCCCTCTCCTTTTGTTTTTGTTT 58.652 36.000 0.00 0.00 0.00 2.83
1787 1808 6.367374 TCCCTCTCCTTTTGTTTTTGTTTT 57.633 33.333 0.00 0.00 0.00 2.43
1788 1809 6.774673 TCCCTCTCCTTTTGTTTTTGTTTTT 58.225 32.000 0.00 0.00 0.00 1.94
1789 1810 6.652900 TCCCTCTCCTTTTGTTTTTGTTTTTG 59.347 34.615 0.00 0.00 0.00 2.44
1790 1811 6.652900 CCCTCTCCTTTTGTTTTTGTTTTTGA 59.347 34.615 0.00 0.00 0.00 2.69
1791 1812 7.174080 CCCTCTCCTTTTGTTTTTGTTTTTGAA 59.826 33.333 0.00 0.00 0.00 2.69
1792 1813 8.563732 CCTCTCCTTTTGTTTTTGTTTTTGAAA 58.436 29.630 0.00 0.00 0.00 2.69
1793 1814 9.943163 CTCTCCTTTTGTTTTTGTTTTTGAAAA 57.057 25.926 0.00 0.00 0.00 2.29
1806 1827 7.908827 TGTTTTTGAAAAAGAGGTTAAACCC 57.091 32.000 2.91 0.00 39.75 4.11
1807 1828 6.879993 TGTTTTTGAAAAAGAGGTTAAACCCC 59.120 34.615 2.91 0.00 39.75 4.95
1808 1829 6.877668 TTTTGAAAAAGAGGTTAAACCCCT 57.122 33.333 0.00 0.00 39.75 4.79
1809 1830 6.877668 TTTGAAAAAGAGGTTAAACCCCTT 57.122 33.333 0.00 0.00 39.75 3.95
1810 1831 5.862678 TGAAAAAGAGGTTAAACCCCTTG 57.137 39.130 0.00 0.00 39.75 3.61
1811 1832 4.100344 TGAAAAAGAGGTTAAACCCCTTGC 59.900 41.667 0.00 0.00 39.75 4.01
1812 1833 2.304221 AAGAGGTTAAACCCCTTGCC 57.696 50.000 0.00 0.00 39.75 4.52
1813 1834 1.456919 AGAGGTTAAACCCCTTGCCT 58.543 50.000 0.00 0.00 39.75 4.75
1814 1835 1.787058 AGAGGTTAAACCCCTTGCCTT 59.213 47.619 0.00 0.00 39.75 4.35
1815 1836 2.179204 AGAGGTTAAACCCCTTGCCTTT 59.821 45.455 0.00 0.00 39.75 3.11
1816 1837 2.299013 GAGGTTAAACCCCTTGCCTTTG 59.701 50.000 0.00 0.00 39.75 2.77
1817 1838 1.270625 GGTTAAACCCCTTGCCTTTGC 60.271 52.381 0.00 0.00 32.42 3.68
1818 1839 3.869737 GGTTAAACCCCTTGCCTTTGCA 61.870 50.000 0.00 0.00 37.84 4.08
1819 1840 5.139995 GGTTAAACCCCTTGCCTTTGCAT 62.140 47.826 0.00 0.00 38.87 3.96
1820 1841 6.893308 GGTTAAACCCCTTGCCTTTGCATC 62.893 50.000 0.00 0.00 38.87 3.91
1837 1858 2.917363 CATCAATCGATGCATGCAGTC 58.083 47.619 26.69 20.23 42.54 3.51
1838 1859 2.027003 TCAATCGATGCATGCAGTCA 57.973 45.000 26.69 11.96 0.00 3.41
1839 1860 2.567985 TCAATCGATGCATGCAGTCAT 58.432 42.857 26.69 13.75 0.00 3.06
1840 1861 2.546789 TCAATCGATGCATGCAGTCATC 59.453 45.455 26.69 17.02 36.60 2.92
1841 1862 2.545537 ATCGATGCATGCAGTCATCT 57.454 45.000 26.69 7.85 37.52 2.90
1842 1863 2.320745 TCGATGCATGCAGTCATCTT 57.679 45.000 26.69 7.01 37.52 2.40
1843 1864 2.635714 TCGATGCATGCAGTCATCTTT 58.364 42.857 26.69 6.16 37.52 2.52
1844 1865 3.011818 TCGATGCATGCAGTCATCTTTT 58.988 40.909 26.69 5.33 37.52 2.27
1845 1866 4.190772 TCGATGCATGCAGTCATCTTTTA 58.809 39.130 26.69 0.00 37.52 1.52
1846 1867 4.818005 TCGATGCATGCAGTCATCTTTTAT 59.182 37.500 26.69 3.90 37.52 1.40
1847 1868 5.297527 TCGATGCATGCAGTCATCTTTTATT 59.702 36.000 26.69 3.67 37.52 1.40
1848 1869 6.482973 TCGATGCATGCAGTCATCTTTTATTA 59.517 34.615 26.69 0.00 37.52 0.98
1849 1870 7.012232 TCGATGCATGCAGTCATCTTTTATTAA 59.988 33.333 26.69 0.00 37.52 1.40
1850 1871 7.806487 CGATGCATGCAGTCATCTTTTATTAAT 59.194 33.333 26.69 2.00 37.52 1.40
1851 1872 9.472361 GATGCATGCAGTCATCTTTTATTAATT 57.528 29.630 26.69 1.61 36.91 1.40
1877 1898 7.517614 TTCAACCAAAAATGCTAGACATACA 57.482 32.000 0.00 0.00 38.34 2.29
1878 1899 7.517614 TCAACCAAAAATGCTAGACATACAA 57.482 32.000 0.00 0.00 38.34 2.41
1879 1900 7.946207 TCAACCAAAAATGCTAGACATACAAA 58.054 30.769 0.00 0.00 38.34 2.83
1880 1901 7.865385 TCAACCAAAAATGCTAGACATACAAAC 59.135 33.333 0.00 0.00 38.34 2.93
1881 1902 7.283625 ACCAAAAATGCTAGACATACAAACA 57.716 32.000 0.00 0.00 38.34 2.83
1882 1903 7.721402 ACCAAAAATGCTAGACATACAAACAA 58.279 30.769 0.00 0.00 38.34 2.83
1883 1904 8.200792 ACCAAAAATGCTAGACATACAAACAAA 58.799 29.630 0.00 0.00 38.34 2.83
1884 1905 9.206870 CCAAAAATGCTAGACATACAAACAAAT 57.793 29.630 0.00 0.00 38.34 2.32
1890 1911 8.785329 TGCTAGACATACAAACAAATACATGA 57.215 30.769 0.00 0.00 0.00 3.07
1891 1912 8.882736 TGCTAGACATACAAACAAATACATGAG 58.117 33.333 0.00 0.00 0.00 2.90
1892 1913 8.883731 GCTAGACATACAAACAAATACATGAGT 58.116 33.333 0.00 0.00 0.00 3.41
1920 1941 8.974060 ACAAACTCTTTTCATCTACTAACCAA 57.026 30.769 0.00 0.00 0.00 3.67
1921 1942 9.574516 ACAAACTCTTTTCATCTACTAACCAAT 57.425 29.630 0.00 0.00 0.00 3.16
1923 1944 9.793259 AAACTCTTTTCATCTACTAACCAATCA 57.207 29.630 0.00 0.00 0.00 2.57
1924 1945 8.779354 ACTCTTTTCATCTACTAACCAATCAC 57.221 34.615 0.00 0.00 0.00 3.06
1925 1946 8.375506 ACTCTTTTCATCTACTAACCAATCACA 58.624 33.333 0.00 0.00 0.00 3.58
1926 1947 9.219603 CTCTTTTCATCTACTAACCAATCACAA 57.780 33.333 0.00 0.00 0.00 3.33
1927 1948 9.567776 TCTTTTCATCTACTAACCAATCACAAA 57.432 29.630 0.00 0.00 0.00 2.83
1928 1949 9.612620 CTTTTCATCTACTAACCAATCACAAAC 57.387 33.333 0.00 0.00 0.00 2.93
1929 1950 8.918202 TTTCATCTACTAACCAATCACAAACT 57.082 30.769 0.00 0.00 0.00 2.66
1930 1951 8.918202 TTCATCTACTAACCAATCACAAACTT 57.082 30.769 0.00 0.00 0.00 2.66
1931 1952 8.322906 TCATCTACTAACCAATCACAAACTTG 57.677 34.615 0.00 0.00 0.00 3.16
1932 1953 6.554334 TCTACTAACCAATCACAAACTTGC 57.446 37.500 0.00 0.00 0.00 4.01
1933 1954 6.296026 TCTACTAACCAATCACAAACTTGCT 58.704 36.000 0.00 0.00 0.00 3.91
1934 1955 5.438761 ACTAACCAATCACAAACTTGCTC 57.561 39.130 0.00 0.00 0.00 4.26
1935 1956 3.733443 AACCAATCACAAACTTGCTCC 57.267 42.857 0.00 0.00 0.00 4.70
1936 1957 1.963515 ACCAATCACAAACTTGCTCCC 59.036 47.619 0.00 0.00 0.00 4.30
1937 1958 1.273327 CCAATCACAAACTTGCTCCCC 59.727 52.381 0.00 0.00 0.00 4.81
1938 1959 1.273327 CAATCACAAACTTGCTCCCCC 59.727 52.381 0.00 0.00 0.00 5.40
1958 1979 2.134789 CTGATTTTCAGGAGGGGTGG 57.865 55.000 0.00 0.00 40.71 4.61
1959 1980 0.704076 TGATTTTCAGGAGGGGTGGG 59.296 55.000 0.00 0.00 0.00 4.61
1960 1981 0.684479 GATTTTCAGGAGGGGTGGGC 60.684 60.000 0.00 0.00 0.00 5.36
1961 1982 2.168272 ATTTTCAGGAGGGGTGGGCC 62.168 60.000 0.00 0.00 0.00 5.80
1976 1997 4.171103 GCCGCCTCCCCACGTATT 62.171 66.667 0.00 0.00 0.00 1.89
1977 1998 2.203015 CCGCCTCCCCACGTATTG 60.203 66.667 0.00 0.00 0.00 1.90
1978 1999 2.727392 CCGCCTCCCCACGTATTGA 61.727 63.158 0.00 0.00 0.00 2.57
1979 2000 1.520787 CGCCTCCCCACGTATTGAC 60.521 63.158 0.00 0.00 0.00 3.18
1980 2001 1.153229 GCCTCCCCACGTATTGACC 60.153 63.158 0.00 0.00 0.00 4.02
1981 2002 1.906105 GCCTCCCCACGTATTGACCA 61.906 60.000 0.00 0.00 0.00 4.02
1982 2003 0.616371 CCTCCCCACGTATTGACCAA 59.384 55.000 0.00 0.00 0.00 3.67
1983 2004 1.211949 CCTCCCCACGTATTGACCAAT 59.788 52.381 0.00 0.64 34.93 3.16
1984 2005 2.288666 CTCCCCACGTATTGACCAATG 58.711 52.381 5.56 0.00 32.50 2.82
1985 2006 1.909986 TCCCCACGTATTGACCAATGA 59.090 47.619 5.56 0.00 32.50 2.57
1986 2007 2.306219 TCCCCACGTATTGACCAATGAA 59.694 45.455 5.56 0.00 32.50 2.57
1987 2008 2.682856 CCCCACGTATTGACCAATGAAG 59.317 50.000 5.56 0.38 32.50 3.02
1988 2009 3.343617 CCCACGTATTGACCAATGAAGT 58.656 45.455 5.56 0.92 32.50 3.01
1989 2010 3.756434 CCCACGTATTGACCAATGAAGTT 59.244 43.478 5.56 0.00 32.50 2.66
1990 2011 4.938832 CCCACGTATTGACCAATGAAGTTA 59.061 41.667 5.56 0.00 32.50 2.24
1991 2012 5.413213 CCCACGTATTGACCAATGAAGTTAA 59.587 40.000 5.56 0.00 32.50 2.01
1992 2013 6.311723 CCACGTATTGACCAATGAAGTTAAC 58.688 40.000 5.56 0.00 32.50 2.01
1993 2014 6.148811 CCACGTATTGACCAATGAAGTTAACT 59.851 38.462 1.12 1.12 32.50 2.24
1994 2015 7.234384 CACGTATTGACCAATGAAGTTAACTC 58.766 38.462 8.95 3.51 32.50 3.01
1995 2016 7.117812 CACGTATTGACCAATGAAGTTAACTCT 59.882 37.037 8.95 0.00 32.50 3.24
1996 2017 7.331193 ACGTATTGACCAATGAAGTTAACTCTC 59.669 37.037 8.95 9.31 32.50 3.20
1997 2018 7.545965 CGTATTGACCAATGAAGTTAACTCTCT 59.454 37.037 8.95 0.00 32.50 3.10
1998 2019 7.913674 ATTGACCAATGAAGTTAACTCTCTC 57.086 36.000 8.95 3.67 0.00 3.20
1999 2020 6.672266 TGACCAATGAAGTTAACTCTCTCT 57.328 37.500 8.95 0.00 0.00 3.10
2000 2021 6.459066 TGACCAATGAAGTTAACTCTCTCTG 58.541 40.000 8.95 9.53 0.00 3.35
2001 2022 6.042093 TGACCAATGAAGTTAACTCTCTCTGT 59.958 38.462 8.95 3.21 0.00 3.41
2002 2023 7.232737 TGACCAATGAAGTTAACTCTCTCTGTA 59.767 37.037 8.95 0.00 0.00 2.74
2003 2024 7.963532 ACCAATGAAGTTAACTCTCTCTGTAA 58.036 34.615 8.95 0.00 0.00 2.41
2004 2025 8.429641 ACCAATGAAGTTAACTCTCTCTGTAAA 58.570 33.333 8.95 0.00 0.00 2.01
2005 2026 9.273016 CCAATGAAGTTAACTCTCTCTGTAAAA 57.727 33.333 8.95 0.00 0.00 1.52
2008 2029 9.660180 ATGAAGTTAACTCTCTCTGTAAAATCC 57.340 33.333 8.95 0.00 0.00 3.01
2009 2030 8.871125 TGAAGTTAACTCTCTCTGTAAAATCCT 58.129 33.333 8.95 0.00 0.00 3.24
2010 2031 9.145865 GAAGTTAACTCTCTCTGTAAAATCCTG 57.854 37.037 8.95 0.00 0.00 3.86
2011 2032 8.196378 AGTTAACTCTCTCTGTAAAATCCTGT 57.804 34.615 1.12 0.00 0.00 4.00
2012 2033 9.310449 AGTTAACTCTCTCTGTAAAATCCTGTA 57.690 33.333 1.12 0.00 0.00 2.74
2013 2034 9.924650 GTTAACTCTCTCTGTAAAATCCTGTAA 57.075 33.333 0.00 0.00 0.00 2.41
2014 2035 9.924650 TTAACTCTCTCTGTAAAATCCTGTAAC 57.075 33.333 0.00 0.00 0.00 2.50
2015 2036 7.784470 ACTCTCTCTGTAAAATCCTGTAACT 57.216 36.000 0.00 0.00 0.00 2.24
2016 2037 7.832769 ACTCTCTCTGTAAAATCCTGTAACTC 58.167 38.462 0.00 0.00 0.00 3.01
2017 2038 7.451877 ACTCTCTCTGTAAAATCCTGTAACTCA 59.548 37.037 0.00 0.00 0.00 3.41
2018 2039 8.367660 TCTCTCTGTAAAATCCTGTAACTCAT 57.632 34.615 0.00 0.00 0.00 2.90
2019 2040 8.816894 TCTCTCTGTAAAATCCTGTAACTCATT 58.183 33.333 0.00 0.00 0.00 2.57
2020 2041 9.442047 CTCTCTGTAAAATCCTGTAACTCATTT 57.558 33.333 0.00 0.00 0.00 2.32
2021 2042 9.219603 TCTCTGTAAAATCCTGTAACTCATTTG 57.780 33.333 0.00 0.00 0.00 2.32
2022 2043 8.918202 TCTGTAAAATCCTGTAACTCATTTGT 57.082 30.769 0.00 0.00 0.00 2.83
2025 2046 8.714179 TGTAAAATCCTGTAACTCATTTGTACG 58.286 33.333 0.00 0.00 0.00 3.67
2026 2047 7.739498 AAAATCCTGTAACTCATTTGTACGT 57.261 32.000 0.00 0.00 0.00 3.57
2027 2048 6.721571 AATCCTGTAACTCATTTGTACGTG 57.278 37.500 0.00 0.00 0.00 4.49
2028 2049 5.204409 TCCTGTAACTCATTTGTACGTGT 57.796 39.130 0.00 0.00 0.00 4.49
2029 2050 6.330004 TCCTGTAACTCATTTGTACGTGTA 57.670 37.500 0.00 0.00 0.00 2.90
2030 2051 6.384224 TCCTGTAACTCATTTGTACGTGTAG 58.616 40.000 0.00 0.00 0.00 2.74
2031 2052 5.061808 CCTGTAACTCATTTGTACGTGTAGC 59.938 44.000 0.00 0.00 0.00 3.58
2032 2053 5.530712 TGTAACTCATTTGTACGTGTAGCA 58.469 37.500 0.00 0.00 0.00 3.49
2033 2054 6.160684 TGTAACTCATTTGTACGTGTAGCAT 58.839 36.000 0.00 0.00 0.00 3.79
2034 2055 6.647481 TGTAACTCATTTGTACGTGTAGCATT 59.353 34.615 0.00 0.00 0.00 3.56
2035 2056 7.813627 TGTAACTCATTTGTACGTGTAGCATTA 59.186 33.333 0.00 0.00 0.00 1.90
2036 2057 6.642683 ACTCATTTGTACGTGTAGCATTAC 57.357 37.500 0.00 0.00 0.00 1.89
2037 2058 6.395629 ACTCATTTGTACGTGTAGCATTACT 58.604 36.000 0.00 0.00 0.00 2.24
2038 2059 6.872020 ACTCATTTGTACGTGTAGCATTACTT 59.128 34.615 0.00 0.00 0.00 2.24
2039 2060 7.386848 ACTCATTTGTACGTGTAGCATTACTTT 59.613 33.333 0.00 0.00 0.00 2.66
2040 2061 8.090250 TCATTTGTACGTGTAGCATTACTTTT 57.910 30.769 0.00 0.00 0.00 2.27
2041 2062 9.205719 TCATTTGTACGTGTAGCATTACTTTTA 57.794 29.630 0.00 0.00 0.00 1.52
2042 2063 9.982291 CATTTGTACGTGTAGCATTACTTTTAT 57.018 29.630 0.00 0.00 0.00 1.40
2071 2092 8.723942 ACAAAGGTCTGACAAGAATATACATC 57.276 34.615 10.38 0.00 33.05 3.06
2072 2093 8.321353 ACAAAGGTCTGACAAGAATATACATCA 58.679 33.333 10.38 0.00 33.05 3.07
2073 2094 9.166173 CAAAGGTCTGACAAGAATATACATCAA 57.834 33.333 10.38 0.00 33.05 2.57
2074 2095 9.911788 AAAGGTCTGACAAGAATATACATCAAT 57.088 29.630 10.38 0.00 33.05 2.57
2075 2096 9.553064 AAGGTCTGACAAGAATATACATCAATC 57.447 33.333 10.38 0.00 33.05 2.67
2076 2097 8.153550 AGGTCTGACAAGAATATACATCAATCC 58.846 37.037 10.38 0.00 33.05 3.01
2077 2098 7.933577 GGTCTGACAAGAATATACATCAATCCA 59.066 37.037 10.38 0.00 33.05 3.41
2078 2099 9.499479 GTCTGACAAGAATATACATCAATCCAT 57.501 33.333 2.24 0.00 33.05 3.41
2079 2100 9.716531 TCTGACAAGAATATACATCAATCCATC 57.283 33.333 0.00 0.00 0.00 3.51
2080 2101 9.498176 CTGACAAGAATATACATCAATCCATCA 57.502 33.333 0.00 0.00 0.00 3.07
2085 2106 8.713737 AGAATATACATCAATCCATCATCACG 57.286 34.615 0.00 0.00 0.00 4.35
2086 2107 6.915544 ATATACATCAATCCATCATCACGC 57.084 37.500 0.00 0.00 0.00 5.34
2087 2108 2.921821 ACATCAATCCATCATCACGCA 58.078 42.857 0.00 0.00 0.00 5.24
2088 2109 2.615447 ACATCAATCCATCATCACGCAC 59.385 45.455 0.00 0.00 0.00 5.34
2089 2110 2.399916 TCAATCCATCATCACGCACA 57.600 45.000 0.00 0.00 0.00 4.57
2090 2111 2.009051 TCAATCCATCATCACGCACAC 58.991 47.619 0.00 0.00 0.00 3.82
2091 2112 1.064505 CAATCCATCATCACGCACACC 59.935 52.381 0.00 0.00 0.00 4.16
2092 2113 0.543277 ATCCATCATCACGCACACCT 59.457 50.000 0.00 0.00 0.00 4.00
2093 2114 1.190643 TCCATCATCACGCACACCTA 58.809 50.000 0.00 0.00 0.00 3.08
2094 2115 1.134818 TCCATCATCACGCACACCTAC 60.135 52.381 0.00 0.00 0.00 3.18
2095 2116 1.405391 CCATCATCACGCACACCTACA 60.405 52.381 0.00 0.00 0.00 2.74
2096 2117 2.345876 CATCATCACGCACACCTACAA 58.654 47.619 0.00 0.00 0.00 2.41
2097 2118 2.535012 TCATCACGCACACCTACAAA 57.465 45.000 0.00 0.00 0.00 2.83
2098 2119 2.139917 TCATCACGCACACCTACAAAC 58.860 47.619 0.00 0.00 0.00 2.93
2099 2120 2.143122 CATCACGCACACCTACAAACT 58.857 47.619 0.00 0.00 0.00 2.66
2100 2121 2.319136 TCACGCACACCTACAAACTT 57.681 45.000 0.00 0.00 0.00 2.66
2101 2122 1.937223 TCACGCACACCTACAAACTTG 59.063 47.619 0.00 0.00 0.00 3.16
2102 2123 1.937223 CACGCACACCTACAAACTTGA 59.063 47.619 0.00 0.00 0.00 3.02
2103 2124 2.548057 CACGCACACCTACAAACTTGAT 59.452 45.455 0.00 0.00 0.00 2.57
2104 2125 3.743911 CACGCACACCTACAAACTTGATA 59.256 43.478 0.00 0.00 0.00 2.15
2105 2126 4.212425 CACGCACACCTACAAACTTGATAA 59.788 41.667 0.00 0.00 0.00 1.75
2106 2127 5.001232 ACGCACACCTACAAACTTGATAAT 58.999 37.500 0.00 0.00 0.00 1.28
2107 2128 5.106712 ACGCACACCTACAAACTTGATAATG 60.107 40.000 0.00 0.00 0.00 1.90
2108 2129 5.106712 CGCACACCTACAAACTTGATAATGT 60.107 40.000 0.00 0.00 0.00 2.71
2109 2130 6.086222 GCACACCTACAAACTTGATAATGTG 58.914 40.000 12.81 12.81 37.39 3.21
2110 2131 6.072728 GCACACCTACAAACTTGATAATGTGA 60.073 38.462 17.55 0.00 36.65 3.58
2111 2132 7.521423 GCACACCTACAAACTTGATAATGTGAA 60.521 37.037 17.55 0.00 36.65 3.18
2112 2133 8.017373 CACACCTACAAACTTGATAATGTGAAG 58.983 37.037 12.23 0.00 36.65 3.02
2113 2134 7.719633 ACACCTACAAACTTGATAATGTGAAGT 59.280 33.333 0.00 0.00 0.00 3.01
2114 2135 8.017373 CACCTACAAACTTGATAATGTGAAGTG 58.983 37.037 0.00 0.00 30.33 3.16
2115 2136 7.023575 CCTACAAACTTGATAATGTGAAGTGC 58.976 38.462 0.00 0.00 30.33 4.40
2116 2137 6.639632 ACAAACTTGATAATGTGAAGTGCT 57.360 33.333 0.00 0.00 30.33 4.40
2117 2138 6.672147 ACAAACTTGATAATGTGAAGTGCTC 58.328 36.000 0.00 0.00 30.33 4.26
2118 2139 6.488006 ACAAACTTGATAATGTGAAGTGCTCT 59.512 34.615 0.00 0.00 30.33 4.09
2119 2140 6.734104 AACTTGATAATGTGAAGTGCTCTC 57.266 37.500 0.00 0.00 30.33 3.20
2120 2141 5.798132 ACTTGATAATGTGAAGTGCTCTCA 58.202 37.500 0.00 0.00 32.31 3.27
2121 2142 5.641209 ACTTGATAATGTGAAGTGCTCTCAC 59.359 40.000 9.83 9.83 43.44 3.51
2135 2156 6.398234 GTGCTCTCACTCTCCATATCTAAA 57.602 41.667 0.00 0.00 40.03 1.85
2136 2157 6.810911 GTGCTCTCACTCTCCATATCTAAAA 58.189 40.000 0.00 0.00 40.03 1.52
2137 2158 7.441017 GTGCTCTCACTCTCCATATCTAAAAT 58.559 38.462 0.00 0.00 40.03 1.82
2138 2159 7.598493 GTGCTCTCACTCTCCATATCTAAAATC 59.402 40.741 0.00 0.00 40.03 2.17
2139 2160 6.806249 GCTCTCACTCTCCATATCTAAAATCG 59.194 42.308 0.00 0.00 0.00 3.34
2140 2161 7.220741 TCTCACTCTCCATATCTAAAATCGG 57.779 40.000 0.00 0.00 0.00 4.18
2141 2162 6.778069 TCTCACTCTCCATATCTAAAATCGGT 59.222 38.462 0.00 0.00 0.00 4.69
2142 2163 6.749139 TCACTCTCCATATCTAAAATCGGTG 58.251 40.000 0.00 0.00 0.00 4.94
2143 2164 6.323996 TCACTCTCCATATCTAAAATCGGTGT 59.676 38.462 0.00 0.00 0.00 4.16
2144 2165 6.642950 CACTCTCCATATCTAAAATCGGTGTC 59.357 42.308 0.00 0.00 0.00 3.67
2145 2166 6.323996 ACTCTCCATATCTAAAATCGGTGTCA 59.676 38.462 0.00 0.00 0.00 3.58
2146 2167 7.015682 ACTCTCCATATCTAAAATCGGTGTCAT 59.984 37.037 0.00 0.00 0.00 3.06
2147 2168 7.378966 TCTCCATATCTAAAATCGGTGTCATC 58.621 38.462 0.00 0.00 0.00 2.92
2148 2169 6.156519 TCCATATCTAAAATCGGTGTCATCG 58.843 40.000 0.00 0.00 0.00 3.84
2149 2170 5.926542 CCATATCTAAAATCGGTGTCATCGT 59.073 40.000 5.22 0.00 0.00 3.73
2150 2171 6.089551 CCATATCTAAAATCGGTGTCATCGTC 59.910 42.308 5.22 0.00 0.00 4.20
2151 2172 3.431856 TCTAAAATCGGTGTCATCGTCG 58.568 45.455 5.22 0.00 0.00 5.12
2152 2173 2.357327 AAAATCGGTGTCATCGTCGA 57.643 45.000 5.22 0.00 36.07 4.20
2153 2174 2.579207 AAATCGGTGTCATCGTCGAT 57.421 45.000 5.22 0.75 43.06 3.59
2154 2175 2.121116 AATCGGTGTCATCGTCGATC 57.879 50.000 4.34 0.00 40.80 3.69
2155 2176 0.311165 ATCGGTGTCATCGTCGATCC 59.689 55.000 4.34 2.65 37.77 3.36
2156 2177 1.027792 TCGGTGTCATCGTCGATCCA 61.028 55.000 4.34 2.37 0.00 3.41
2157 2178 0.030773 CGGTGTCATCGTCGATCCAT 59.969 55.000 4.34 0.00 0.00 3.41
2158 2179 1.772182 GGTGTCATCGTCGATCCATC 58.228 55.000 4.34 1.93 0.00 3.51
2159 2180 1.603172 GGTGTCATCGTCGATCCATCC 60.603 57.143 4.34 2.85 0.00 3.51
2160 2181 1.067060 GTGTCATCGTCGATCCATCCA 59.933 52.381 4.34 0.00 0.00 3.41
2161 2182 1.963515 TGTCATCGTCGATCCATCCAT 59.036 47.619 4.34 0.00 0.00 3.41
2162 2183 2.288395 TGTCATCGTCGATCCATCCATG 60.288 50.000 4.34 0.00 0.00 3.66
2163 2184 1.963515 TCATCGTCGATCCATCCATGT 59.036 47.619 4.34 0.00 0.00 3.21
2164 2185 3.057526 GTCATCGTCGATCCATCCATGTA 60.058 47.826 4.34 0.00 0.00 2.29
2165 2186 3.572255 TCATCGTCGATCCATCCATGTAA 59.428 43.478 4.34 0.00 0.00 2.41
2166 2187 3.364889 TCGTCGATCCATCCATGTAAC 57.635 47.619 0.00 0.00 0.00 2.50
2167 2188 2.691011 TCGTCGATCCATCCATGTAACA 59.309 45.455 0.00 0.00 0.00 2.41
2168 2189 3.131400 TCGTCGATCCATCCATGTAACAA 59.869 43.478 0.00 0.00 0.00 2.83
2169 2190 3.868661 CGTCGATCCATCCATGTAACAAA 59.131 43.478 0.00 0.00 0.00 2.83
2170 2191 4.511454 CGTCGATCCATCCATGTAACAAAT 59.489 41.667 0.00 0.00 0.00 2.32
2171 2192 5.333339 CGTCGATCCATCCATGTAACAAATC 60.333 44.000 0.00 0.00 0.00 2.17
2172 2193 5.527214 GTCGATCCATCCATGTAACAAATCA 59.473 40.000 0.00 0.00 0.00 2.57
2173 2194 5.759763 TCGATCCATCCATGTAACAAATCAG 59.240 40.000 0.00 0.00 0.00 2.90
2174 2195 5.759763 CGATCCATCCATGTAACAAATCAGA 59.240 40.000 0.00 0.00 0.00 3.27
2175 2196 6.260714 CGATCCATCCATGTAACAAATCAGAA 59.739 38.462 0.00 0.00 0.00 3.02
2176 2197 6.757897 TCCATCCATGTAACAAATCAGAAC 57.242 37.500 0.00 0.00 0.00 3.01
2177 2198 5.652014 TCCATCCATGTAACAAATCAGAACC 59.348 40.000 0.00 0.00 0.00 3.62
2178 2199 5.418524 CCATCCATGTAACAAATCAGAACCA 59.581 40.000 0.00 0.00 0.00 3.67
2179 2200 6.071447 CCATCCATGTAACAAATCAGAACCAA 60.071 38.462 0.00 0.00 0.00 3.67
2180 2201 6.325919 TCCATGTAACAAATCAGAACCAAC 57.674 37.500 0.00 0.00 0.00 3.77
2181 2202 5.830457 TCCATGTAACAAATCAGAACCAACA 59.170 36.000 0.00 0.00 0.00 3.33
2182 2203 6.016360 TCCATGTAACAAATCAGAACCAACAG 60.016 38.462 0.00 0.00 0.00 3.16
2183 2204 5.181690 TGTAACAAATCAGAACCAACAGC 57.818 39.130 0.00 0.00 0.00 4.40
2184 2205 3.733443 AACAAATCAGAACCAACAGCC 57.267 42.857 0.00 0.00 0.00 4.85
2185 2206 1.608590 ACAAATCAGAACCAACAGCCG 59.391 47.619 0.00 0.00 0.00 5.52
2186 2207 1.608590 CAAATCAGAACCAACAGCCGT 59.391 47.619 0.00 0.00 0.00 5.68
2187 2208 1.981256 AATCAGAACCAACAGCCGTT 58.019 45.000 0.00 0.00 35.01 4.44
2194 2215 2.050714 CAACAGCCGTTGCAGCAG 60.051 61.111 0.00 0.00 45.64 4.24
2195 2216 2.203195 AACAGCCGTTGCAGCAGA 60.203 55.556 0.24 0.00 41.13 4.26
2196 2217 2.546494 AACAGCCGTTGCAGCAGAC 61.546 57.895 0.24 0.00 41.13 3.51
2197 2218 3.730761 CAGCCGTTGCAGCAGACC 61.731 66.667 0.24 0.00 41.13 3.85
2198 2219 3.946201 AGCCGTTGCAGCAGACCT 61.946 61.111 0.24 0.00 41.13 3.85
2199 2220 2.047274 GCCGTTGCAGCAGACCTA 60.047 61.111 0.24 0.00 37.47 3.08
2200 2221 1.671054 GCCGTTGCAGCAGACCTAA 60.671 57.895 0.24 0.00 37.47 2.69
2201 2222 1.234615 GCCGTTGCAGCAGACCTAAA 61.235 55.000 0.24 0.00 37.47 1.85
2202 2223 0.798776 CCGTTGCAGCAGACCTAAAG 59.201 55.000 0.24 0.00 0.00 1.85
2203 2224 0.166814 CGTTGCAGCAGACCTAAAGC 59.833 55.000 0.24 0.00 0.00 3.51
2204 2225 1.238439 GTTGCAGCAGACCTAAAGCA 58.762 50.000 0.00 0.00 0.00 3.91
2205 2226 1.068954 GTTGCAGCAGACCTAAAGCAC 60.069 52.381 0.00 0.00 0.00 4.40
2206 2227 0.108396 TGCAGCAGACCTAAAGCACA 59.892 50.000 0.00 0.00 0.00 4.57
2207 2228 0.519077 GCAGCAGACCTAAAGCACAC 59.481 55.000 0.00 0.00 0.00 3.82
2208 2229 1.882912 CAGCAGACCTAAAGCACACA 58.117 50.000 0.00 0.00 0.00 3.72
2209 2230 2.430465 CAGCAGACCTAAAGCACACAT 58.570 47.619 0.00 0.00 0.00 3.21
2210 2231 2.417933 CAGCAGACCTAAAGCACACATC 59.582 50.000 0.00 0.00 0.00 3.06
2211 2232 2.038952 AGCAGACCTAAAGCACACATCA 59.961 45.455 0.00 0.00 0.00 3.07
2212 2233 3.012518 GCAGACCTAAAGCACACATCAT 58.987 45.455 0.00 0.00 0.00 2.45
2213 2234 4.080919 AGCAGACCTAAAGCACACATCATA 60.081 41.667 0.00 0.00 0.00 2.15
2214 2235 4.818546 GCAGACCTAAAGCACACATCATAT 59.181 41.667 0.00 0.00 0.00 1.78
2215 2236 5.991606 GCAGACCTAAAGCACACATCATATA 59.008 40.000 0.00 0.00 0.00 0.86
2216 2237 6.073548 GCAGACCTAAAGCACACATCATATAC 60.074 42.308 0.00 0.00 0.00 1.47
2217 2238 6.986231 CAGACCTAAAGCACACATCATATACA 59.014 38.462 0.00 0.00 0.00 2.29
2218 2239 6.986817 AGACCTAAAGCACACATCATATACAC 59.013 38.462 0.00 0.00 0.00 2.90
2219 2240 6.649155 ACCTAAAGCACACATCATATACACA 58.351 36.000 0.00 0.00 0.00 3.72
2220 2241 6.538742 ACCTAAAGCACACATCATATACACAC 59.461 38.462 0.00 0.00 0.00 3.82
2221 2242 5.469373 AAAGCACACATCATATACACACG 57.531 39.130 0.00 0.00 0.00 4.49
2222 2243 4.123497 AGCACACATCATATACACACGT 57.877 40.909 0.00 0.00 0.00 4.49
2223 2244 4.503910 AGCACACATCATATACACACGTT 58.496 39.130 0.00 0.00 0.00 3.99
2224 2245 4.935205 AGCACACATCATATACACACGTTT 59.065 37.500 0.00 0.00 0.00 3.60
2225 2246 5.411361 AGCACACATCATATACACACGTTTT 59.589 36.000 0.00 0.00 0.00 2.43
2226 2247 6.592220 AGCACACATCATATACACACGTTTTA 59.408 34.615 0.00 0.00 0.00 1.52
2227 2248 6.899771 GCACACATCATATACACACGTTTTAG 59.100 38.462 0.00 0.00 0.00 1.85
2228 2249 7.201487 GCACACATCATATACACACGTTTTAGA 60.201 37.037 0.00 0.00 0.00 2.10
2229 2250 8.652463 CACACATCATATACACACGTTTTAGAA 58.348 33.333 0.00 0.00 0.00 2.10
2230 2251 8.869897 ACACATCATATACACACGTTTTAGAAG 58.130 33.333 0.00 0.00 0.00 2.85
2231 2252 9.083080 CACATCATATACACACGTTTTAGAAGA 57.917 33.333 0.00 0.00 0.00 2.87
2232 2253 9.084164 ACATCATATACACACGTTTTAGAAGAC 57.916 33.333 0.00 0.00 0.00 3.01
2233 2254 7.730067 TCATATACACACGTTTTAGAAGACG 57.270 36.000 4.00 4.00 44.34 4.18
2234 2255 4.898328 ATACACACGTTTTAGAAGACGC 57.102 40.909 5.35 0.00 42.67 5.19
2235 2256 1.862827 ACACACGTTTTAGAAGACGCC 59.137 47.619 5.35 0.00 42.67 5.68
2236 2257 1.862201 CACACGTTTTAGAAGACGCCA 59.138 47.619 5.35 0.00 42.67 5.69
2237 2258 2.478894 CACACGTTTTAGAAGACGCCAT 59.521 45.455 5.35 0.00 42.67 4.40
2238 2259 2.735134 ACACGTTTTAGAAGACGCCATC 59.265 45.455 5.35 0.00 42.67 3.51
2239 2260 2.093783 CACGTTTTAGAAGACGCCATCC 59.906 50.000 5.35 0.00 42.67 3.51
2240 2261 1.664151 CGTTTTAGAAGACGCCATCCC 59.336 52.381 0.00 0.00 32.11 3.85
2241 2262 2.014857 GTTTTAGAAGACGCCATCCCC 58.985 52.381 0.00 0.00 0.00 4.81
2242 2263 1.281419 TTTAGAAGACGCCATCCCCA 58.719 50.000 0.00 0.00 0.00 4.96
2243 2264 1.507140 TTAGAAGACGCCATCCCCAT 58.493 50.000 0.00 0.00 0.00 4.00
2244 2265 1.048601 TAGAAGACGCCATCCCCATC 58.951 55.000 0.00 0.00 0.00 3.51
2245 2266 0.692419 AGAAGACGCCATCCCCATCT 60.692 55.000 0.00 0.00 0.00 2.90
2246 2267 0.533755 GAAGACGCCATCCCCATCTG 60.534 60.000 0.00 0.00 0.00 2.90
2247 2268 0.982852 AAGACGCCATCCCCATCTGA 60.983 55.000 0.00 0.00 0.00 3.27
2248 2269 1.227674 GACGCCATCCCCATCTGAC 60.228 63.158 0.00 0.00 0.00 3.51
2249 2270 2.111878 CGCCATCCCCATCTGACC 59.888 66.667 0.00 0.00 0.00 4.02
2250 2271 2.745308 CGCCATCCCCATCTGACCA 61.745 63.158 0.00 0.00 0.00 4.02
2251 2272 1.152881 GCCATCCCCATCTGACCAC 60.153 63.158 0.00 0.00 0.00 4.16
2252 2273 1.639635 GCCATCCCCATCTGACCACT 61.640 60.000 0.00 0.00 0.00 4.00
2253 2274 1.806496 CCATCCCCATCTGACCACTA 58.194 55.000 0.00 0.00 0.00 2.74
2254 2275 2.126882 CCATCCCCATCTGACCACTAA 58.873 52.381 0.00 0.00 0.00 2.24
2255 2276 2.158755 CCATCCCCATCTGACCACTAAC 60.159 54.545 0.00 0.00 0.00 2.34
2256 2277 1.580059 TCCCCATCTGACCACTAACC 58.420 55.000 0.00 0.00 0.00 2.85
2257 2278 0.546598 CCCCATCTGACCACTAACCC 59.453 60.000 0.00 0.00 0.00 4.11
2258 2279 1.285280 CCCATCTGACCACTAACCCA 58.715 55.000 0.00 0.00 0.00 4.51
2259 2280 1.846439 CCCATCTGACCACTAACCCAT 59.154 52.381 0.00 0.00 0.00 4.00
2260 2281 2.158755 CCCATCTGACCACTAACCCATC 60.159 54.545 0.00 0.00 0.00 3.51
2261 2282 2.774234 CCATCTGACCACTAACCCATCT 59.226 50.000 0.00 0.00 0.00 2.90
2262 2283 3.200825 CCATCTGACCACTAACCCATCTT 59.799 47.826 0.00 0.00 0.00 2.40
2263 2284 4.446371 CATCTGACCACTAACCCATCTTC 58.554 47.826 0.00 0.00 0.00 2.87
2264 2285 3.516586 TCTGACCACTAACCCATCTTCA 58.483 45.455 0.00 0.00 0.00 3.02
2265 2286 3.515502 TCTGACCACTAACCCATCTTCAG 59.484 47.826 0.00 0.00 0.00 3.02
2266 2287 3.515502 CTGACCACTAACCCATCTTCAGA 59.484 47.826 0.00 0.00 32.62 3.27
2267 2288 3.907474 TGACCACTAACCCATCTTCAGAA 59.093 43.478 0.00 0.00 0.00 3.02
2268 2289 4.020218 TGACCACTAACCCATCTTCAGAAG 60.020 45.833 3.45 3.45 0.00 2.85
2269 2290 4.168101 ACCACTAACCCATCTTCAGAAGA 58.832 43.478 15.44 15.44 42.69 2.87
2270 2291 4.223923 ACCACTAACCCATCTTCAGAAGAG 59.776 45.833 17.91 7.56 41.61 2.85
2271 2292 4.467795 CCACTAACCCATCTTCAGAAGAGA 59.532 45.833 17.91 0.00 41.61 3.10
2272 2293 5.395103 CCACTAACCCATCTTCAGAAGAGAG 60.395 48.000 17.91 12.47 41.61 3.20
2273 2294 5.420421 CACTAACCCATCTTCAGAAGAGAGA 59.580 44.000 17.91 0.00 41.61 3.10
2274 2295 6.098124 CACTAACCCATCTTCAGAAGAGAGAT 59.902 42.308 17.91 6.88 41.61 2.75
2275 2296 6.671779 ACTAACCCATCTTCAGAAGAGAGATT 59.328 38.462 17.91 11.82 41.61 2.40
2276 2297 5.612725 ACCCATCTTCAGAAGAGAGATTC 57.387 43.478 17.91 0.00 41.61 2.52
2277 2298 4.099266 ACCCATCTTCAGAAGAGAGATTCG 59.901 45.833 17.91 4.36 41.61 3.34
2278 2299 4.050553 CCATCTTCAGAAGAGAGATTCGC 58.949 47.826 17.91 0.00 41.61 4.70
2279 2300 4.441217 CCATCTTCAGAAGAGAGATTCGCA 60.441 45.833 17.91 0.00 41.61 5.10
2280 2301 4.998671 TCTTCAGAAGAGAGATTCGCAT 57.001 40.909 8.95 0.00 34.27 4.73
2281 2302 4.930963 TCTTCAGAAGAGAGATTCGCATC 58.069 43.478 8.95 0.00 34.27 3.91
2282 2303 4.400567 TCTTCAGAAGAGAGATTCGCATCA 59.599 41.667 8.95 0.00 34.27 3.07
2283 2304 4.933505 TCAGAAGAGAGATTCGCATCAT 57.066 40.909 0.00 0.00 34.27 2.45
2284 2305 4.869215 TCAGAAGAGAGATTCGCATCATC 58.131 43.478 0.00 0.00 34.27 2.92
2285 2306 3.989167 CAGAAGAGAGATTCGCATCATCC 59.011 47.826 0.00 0.00 34.27 3.51
2286 2307 3.896888 AGAAGAGAGATTCGCATCATCCT 59.103 43.478 0.00 0.00 34.27 3.24
2287 2308 4.344679 AGAAGAGAGATTCGCATCATCCTT 59.655 41.667 0.00 0.00 34.27 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 85 3.075186 TCGACCTCGACTCCTCCA 58.925 61.111 0.00 0.00 44.22 3.86
197 201 1.612463 AGTGTACTGGGAGACGACAAC 59.388 52.381 0.00 0.00 0.00 3.32
220 224 1.959042 CTCCTAATGATTGCCGTGCT 58.041 50.000 0.00 0.00 0.00 4.40
229 233 4.561752 AGAACTACTGGGCTCCTAATGAT 58.438 43.478 0.00 0.00 0.00 2.45
255 259 2.634940 CAGAGGAAGAAGTGGTCCAAGA 59.365 50.000 0.00 0.00 36.28 3.02
296 300 1.831286 GCTGGGCCATGAATCAGGG 60.831 63.158 6.72 9.92 38.46 4.45
324 328 0.955428 GAAGGGCGCAATGACAGACA 60.955 55.000 10.83 0.00 0.00 3.41
326 330 1.741401 CGAAGGGCGCAATGACAGA 60.741 57.895 10.83 0.00 0.00 3.41
352 356 0.610174 AGCTGAAGACGCTGATTCCA 59.390 50.000 0.00 0.00 36.15 3.53
481 487 0.390472 CTTCTTCCTCAGGTGGTCGC 60.390 60.000 0.00 0.00 0.00 5.19
524 530 1.530655 CTCCAACGCCAACCCCTTT 60.531 57.895 0.00 0.00 0.00 3.11
549 555 1.342496 CTCCATCGCCATGAGCTCTAA 59.658 52.381 16.19 0.00 40.39 2.10
581 587 2.862597 ACCCCCTCTTCTCTCACTATCT 59.137 50.000 0.00 0.00 0.00 1.98
623 631 5.538813 TCCATCGTGCCTATATTTACTCACT 59.461 40.000 0.00 0.00 0.00 3.41
654 662 1.070758 ACGGCATGACTGTCACTCTTT 59.929 47.619 13.50 0.00 29.10 2.52
685 695 3.624861 AGTTCATGGCTTATTGAAGAGCG 59.375 43.478 0.00 0.00 39.78 5.03
726 736 7.445121 TCTCCTCGATCTGCACATAATTTATT 58.555 34.615 0.00 0.00 0.00 1.40
729 739 5.282055 TCTCCTCGATCTGCACATAATTT 57.718 39.130 0.00 0.00 0.00 1.82
734 744 0.388659 GCTCTCCTCGATCTGCACAT 59.611 55.000 0.00 0.00 0.00 3.21
770 780 2.220586 TCAATGTCCGGGAGCACCA 61.221 57.895 0.00 0.00 40.22 4.17
784 794 1.342174 CTGCTTGCCCTTGTTGTCAAT 59.658 47.619 0.00 0.00 32.82 2.57
819 829 4.643387 GGCAGCACAACCTCGGGT 62.643 66.667 0.00 0.00 37.65 5.28
843 859 2.547218 CGTCTTTGGTTCTTCCTCGGAA 60.547 50.000 0.00 0.00 37.07 4.30
844 860 1.000506 CGTCTTTGGTTCTTCCTCGGA 59.999 52.381 0.00 0.00 37.07 4.55
912 932 0.466543 AGTGGTTGTAGTTGCGGTGA 59.533 50.000 0.00 0.00 0.00 4.02
914 934 1.270465 GGTAGTGGTTGTAGTTGCGGT 60.270 52.381 0.00 0.00 0.00 5.68
947 967 1.756538 CCTTGCAAAAGTGAGTTGGGT 59.243 47.619 0.00 0.00 0.00 4.51
1005 1026 0.839946 AGTGCTTGGTGAAGTCCAGT 59.160 50.000 0.00 0.00 38.80 4.00
1044 1065 2.687935 GGTGTTGTTCCTGAGCTTGAAA 59.312 45.455 0.00 0.00 0.00 2.69
1148 1169 3.717400 TGTAGCCGATCTTGATCTGAC 57.283 47.619 8.70 2.87 0.00 3.51
1176 1197 0.539051 CGGGAGTGAGGAGCTTGAAT 59.461 55.000 0.00 0.00 0.00 2.57
1210 1231 1.789464 GCCATCGTCATCGAAGATGAC 59.211 52.381 25.11 25.11 46.17 3.06
1252 1273 2.048127 GGCTTCGTCGTGCTTCCT 60.048 61.111 11.32 0.00 0.00 3.36
1370 1391 8.915057 AACAGCATAATTCAGATAAGCAGTAT 57.085 30.769 0.00 0.00 0.00 2.12
1472 1493 2.039084 CCTCTTTGGCTAGTTGGTGAGT 59.961 50.000 0.00 0.00 0.00 3.41
1507 1528 3.566322 GGTGTTTGGCTGTATACAACACA 59.434 43.478 26.96 15.83 33.92 3.72
1509 1530 3.821748 TGGTGTTTGGCTGTATACAACA 58.178 40.909 7.06 5.18 35.97 3.33
1514 1535 2.025416 AGGCATGGTGTTTGGCTGTATA 60.025 45.455 0.00 0.00 46.94 1.47
1520 1541 1.004679 CCAAGGCATGGTGTTTGGC 60.005 57.895 0.00 0.00 44.85 4.52
1643 1664 3.619419 TGGCTATGCAAATGTAGCTTCA 58.381 40.909 14.87 0.00 42.24 3.02
1646 1667 3.118112 AGTCTGGCTATGCAAATGTAGCT 60.118 43.478 14.87 0.00 42.24 3.32
1650 1671 3.276857 CTCAGTCTGGCTATGCAAATGT 58.723 45.455 0.00 0.00 0.00 2.71
1729 1750 0.038159 GTGTCTGTCCCTGTTCTCGG 60.038 60.000 0.00 0.00 0.00 4.63
1730 1751 0.387367 CGTGTCTGTCCCTGTTCTCG 60.387 60.000 0.00 0.00 0.00 4.04
1731 1752 0.959553 TCGTGTCTGTCCCTGTTCTC 59.040 55.000 0.00 0.00 0.00 2.87
1732 1753 0.962489 CTCGTGTCTGTCCCTGTTCT 59.038 55.000 0.00 0.00 0.00 3.01
1733 1754 0.674534 ACTCGTGTCTGTCCCTGTTC 59.325 55.000 0.00 0.00 0.00 3.18
1734 1755 1.991121 TACTCGTGTCTGTCCCTGTT 58.009 50.000 0.00 0.00 0.00 3.16
1735 1756 2.093106 GATACTCGTGTCTGTCCCTGT 58.907 52.381 0.00 0.00 0.00 4.00
1736 1757 2.370349 AGATACTCGTGTCTGTCCCTG 58.630 52.381 0.00 0.00 29.59 4.45
1737 1758 2.810870 AGATACTCGTGTCTGTCCCT 57.189 50.000 0.00 0.00 29.59 4.20
1738 1759 4.391155 AGATAGATACTCGTGTCTGTCCC 58.609 47.826 13.92 0.00 38.87 4.46
1739 1760 4.453136 GGAGATAGATACTCGTGTCTGTCC 59.547 50.000 13.92 9.84 38.87 4.02
1740 1761 5.057819 TGGAGATAGATACTCGTGTCTGTC 58.942 45.833 10.94 10.94 38.55 3.51
1741 1762 5.037383 TGGAGATAGATACTCGTGTCTGT 57.963 43.478 6.58 0.17 35.49 3.41
1742 1763 5.123186 GGATGGAGATAGATACTCGTGTCTG 59.877 48.000 6.58 0.00 35.49 3.51
1743 1764 5.250200 GGATGGAGATAGATACTCGTGTCT 58.750 45.833 0.00 1.99 35.49 3.41
1744 1765 4.396790 GGGATGGAGATAGATACTCGTGTC 59.603 50.000 0.00 0.00 35.49 3.67
1745 1766 4.043561 AGGGATGGAGATAGATACTCGTGT 59.956 45.833 0.00 0.00 35.49 4.49
1746 1767 4.594970 AGGGATGGAGATAGATACTCGTG 58.405 47.826 0.00 0.00 35.49 4.35
1747 1768 4.538490 AGAGGGATGGAGATAGATACTCGT 59.462 45.833 0.00 0.00 35.49 4.18
1748 1769 5.110814 AGAGGGATGGAGATAGATACTCG 57.889 47.826 0.00 0.00 35.49 4.18
1749 1770 5.193728 AGGAGAGGGATGGAGATAGATACTC 59.806 48.000 0.00 0.00 0.00 2.59
1750 1771 5.115322 AGGAGAGGGATGGAGATAGATACT 58.885 45.833 0.00 0.00 0.00 2.12
1751 1772 5.466127 AGGAGAGGGATGGAGATAGATAC 57.534 47.826 0.00 0.00 0.00 2.24
1752 1773 6.491408 AAAGGAGAGGGATGGAGATAGATA 57.509 41.667 0.00 0.00 0.00 1.98
1753 1774 5.367618 AAAGGAGAGGGATGGAGATAGAT 57.632 43.478 0.00 0.00 0.00 1.98
1754 1775 4.841813 AAAGGAGAGGGATGGAGATAGA 57.158 45.455 0.00 0.00 0.00 1.98
1755 1776 4.657969 ACAAAAGGAGAGGGATGGAGATAG 59.342 45.833 0.00 0.00 0.00 2.08
1756 1777 4.635473 ACAAAAGGAGAGGGATGGAGATA 58.365 43.478 0.00 0.00 0.00 1.98
1757 1778 3.468850 ACAAAAGGAGAGGGATGGAGAT 58.531 45.455 0.00 0.00 0.00 2.75
1758 1779 2.921221 ACAAAAGGAGAGGGATGGAGA 58.079 47.619 0.00 0.00 0.00 3.71
1759 1780 3.728385 AACAAAAGGAGAGGGATGGAG 57.272 47.619 0.00 0.00 0.00 3.86
1760 1781 4.469469 AAAACAAAAGGAGAGGGATGGA 57.531 40.909 0.00 0.00 0.00 3.41
1761 1782 4.344968 ACAAAAACAAAAGGAGAGGGATGG 59.655 41.667 0.00 0.00 0.00 3.51
1762 1783 5.535753 ACAAAAACAAAAGGAGAGGGATG 57.464 39.130 0.00 0.00 0.00 3.51
1763 1784 6.560003 AAACAAAAACAAAAGGAGAGGGAT 57.440 33.333 0.00 0.00 0.00 3.85
1764 1785 6.367374 AAAACAAAAACAAAAGGAGAGGGA 57.633 33.333 0.00 0.00 0.00 4.20
1765 1786 6.652900 TCAAAAACAAAAACAAAAGGAGAGGG 59.347 34.615 0.00 0.00 0.00 4.30
1766 1787 7.665561 TCAAAAACAAAAACAAAAGGAGAGG 57.334 32.000 0.00 0.00 0.00 3.69
1767 1788 9.943163 TTTTCAAAAACAAAAACAAAAGGAGAG 57.057 25.926 0.00 0.00 0.00 3.20
1780 1801 8.784994 GGGTTTAACCTCTTTTTCAAAAACAAA 58.215 29.630 14.27 0.00 38.64 2.83
1781 1802 7.390996 GGGGTTTAACCTCTTTTTCAAAAACAA 59.609 33.333 14.27 0.00 35.29 2.83
1782 1803 6.879993 GGGGTTTAACCTCTTTTTCAAAAACA 59.120 34.615 14.27 0.00 35.29 2.83
1783 1804 7.311364 GGGGTTTAACCTCTTTTTCAAAAAC 57.689 36.000 14.27 0.00 35.29 2.43
1795 1816 2.299013 CAAAGGCAAGGGGTTTAACCTC 59.701 50.000 14.27 10.36 39.74 3.85
1796 1817 2.325484 CAAAGGCAAGGGGTTTAACCT 58.675 47.619 14.27 0.00 38.64 3.50
1797 1818 1.270625 GCAAAGGCAAGGGGTTTAACC 60.271 52.381 5.40 5.40 40.72 2.85
1798 1819 2.163818 GCAAAGGCAAGGGGTTTAAC 57.836 50.000 0.00 0.00 40.72 2.01
1817 1838 4.902712 GATGACTGCATGCATCGATTGATG 60.903 45.833 22.97 17.44 43.86 3.07
1818 1839 2.567985 TGACTGCATGCATCGATTGAT 58.432 42.857 22.97 0.00 34.28 2.57
1819 1840 2.027003 TGACTGCATGCATCGATTGA 57.973 45.000 22.97 2.36 0.00 2.57
1820 1841 2.548480 AGATGACTGCATGCATCGATTG 59.452 45.455 22.97 10.98 44.23 2.67
1821 1842 2.847441 AGATGACTGCATGCATCGATT 58.153 42.857 22.97 5.39 44.23 3.34
1822 1843 2.545537 AGATGACTGCATGCATCGAT 57.454 45.000 22.97 12.76 44.23 3.59
1823 1844 2.320745 AAGATGACTGCATGCATCGA 57.679 45.000 22.97 8.02 44.23 3.59
1824 1845 3.416119 AAAAGATGACTGCATGCATCG 57.584 42.857 22.97 13.40 44.23 3.84
1825 1846 9.472361 AATTAATAAAAGATGACTGCATGCATC 57.528 29.630 22.97 19.75 40.85 3.91
1851 1872 9.237187 TGTATGTCTAGCATTTTTGGTTGAATA 57.763 29.630 5.22 0.00 38.94 1.75
1852 1873 8.121305 TGTATGTCTAGCATTTTTGGTTGAAT 57.879 30.769 5.22 0.00 38.94 2.57
1853 1874 7.517614 TGTATGTCTAGCATTTTTGGTTGAA 57.482 32.000 5.22 0.00 38.94 2.69
1854 1875 7.517614 TTGTATGTCTAGCATTTTTGGTTGA 57.482 32.000 5.22 0.00 38.94 3.18
1855 1876 7.651304 TGTTTGTATGTCTAGCATTTTTGGTTG 59.349 33.333 5.22 0.00 38.94 3.77
1856 1877 7.721402 TGTTTGTATGTCTAGCATTTTTGGTT 58.279 30.769 5.22 0.00 38.94 3.67
1857 1878 7.283625 TGTTTGTATGTCTAGCATTTTTGGT 57.716 32.000 5.22 0.00 38.94 3.67
1858 1879 8.586570 TTTGTTTGTATGTCTAGCATTTTTGG 57.413 30.769 5.22 0.00 38.94 3.28
1864 1885 9.394767 TCATGTATTTGTTTGTATGTCTAGCAT 57.605 29.630 0.00 5.25 41.42 3.79
1865 1886 8.785329 TCATGTATTTGTTTGTATGTCTAGCA 57.215 30.769 0.00 0.00 0.00 3.49
1866 1887 8.883731 ACTCATGTATTTGTTTGTATGTCTAGC 58.116 33.333 0.00 0.00 0.00 3.42
1895 1916 8.974060 TTGGTTAGTAGATGAAAAGAGTTTGT 57.026 30.769 0.00 0.00 0.00 2.83
1897 1918 9.793259 TGATTGGTTAGTAGATGAAAAGAGTTT 57.207 29.630 0.00 0.00 0.00 2.66
1898 1919 9.220767 GTGATTGGTTAGTAGATGAAAAGAGTT 57.779 33.333 0.00 0.00 0.00 3.01
1899 1920 8.375506 TGTGATTGGTTAGTAGATGAAAAGAGT 58.624 33.333 0.00 0.00 0.00 3.24
1900 1921 8.777865 TGTGATTGGTTAGTAGATGAAAAGAG 57.222 34.615 0.00 0.00 0.00 2.85
1901 1922 9.567776 TTTGTGATTGGTTAGTAGATGAAAAGA 57.432 29.630 0.00 0.00 0.00 2.52
1902 1923 9.612620 GTTTGTGATTGGTTAGTAGATGAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
1903 1924 9.349713 AGTTTGTGATTGGTTAGTAGATGAAAA 57.650 29.630 0.00 0.00 0.00 2.29
1904 1925 8.918202 AGTTTGTGATTGGTTAGTAGATGAAA 57.082 30.769 0.00 0.00 0.00 2.69
1905 1926 8.783093 CAAGTTTGTGATTGGTTAGTAGATGAA 58.217 33.333 0.00 0.00 0.00 2.57
1906 1927 7.094805 GCAAGTTTGTGATTGGTTAGTAGATGA 60.095 37.037 0.00 0.00 0.00 2.92
1907 1928 7.023575 GCAAGTTTGTGATTGGTTAGTAGATG 58.976 38.462 0.00 0.00 0.00 2.90
1908 1929 6.942576 AGCAAGTTTGTGATTGGTTAGTAGAT 59.057 34.615 0.00 0.00 33.59 1.98
1909 1930 6.296026 AGCAAGTTTGTGATTGGTTAGTAGA 58.704 36.000 0.00 0.00 33.59 2.59
1910 1931 6.348540 GGAGCAAGTTTGTGATTGGTTAGTAG 60.349 42.308 0.00 0.00 37.27 2.57
1911 1932 5.472137 GGAGCAAGTTTGTGATTGGTTAGTA 59.528 40.000 0.00 0.00 37.27 1.82
1912 1933 4.278419 GGAGCAAGTTTGTGATTGGTTAGT 59.722 41.667 0.00 0.00 37.27 2.24
1913 1934 4.321230 GGGAGCAAGTTTGTGATTGGTTAG 60.321 45.833 0.00 0.00 37.27 2.34
1914 1935 3.572255 GGGAGCAAGTTTGTGATTGGTTA 59.428 43.478 0.00 0.00 37.27 2.85
1915 1936 2.365293 GGGAGCAAGTTTGTGATTGGTT 59.635 45.455 0.00 0.00 37.27 3.67
1916 1937 1.963515 GGGAGCAAGTTTGTGATTGGT 59.036 47.619 0.00 0.00 39.67 3.67
1917 1938 1.273327 GGGGAGCAAGTTTGTGATTGG 59.727 52.381 0.00 0.00 0.00 3.16
1918 1939 1.273327 GGGGGAGCAAGTTTGTGATTG 59.727 52.381 0.00 0.00 0.00 2.67
1919 1940 1.632589 GGGGGAGCAAGTTTGTGATT 58.367 50.000 0.00 0.00 0.00 2.57
1920 1941 3.363787 GGGGGAGCAAGTTTGTGAT 57.636 52.632 0.00 0.00 0.00 3.06
1921 1942 4.920828 GGGGGAGCAAGTTTGTGA 57.079 55.556 0.00 0.00 0.00 3.58
1939 1960 1.341383 CCCACCCCTCCTGAAAATCAG 60.341 57.143 0.32 0.32 43.91 2.90
1940 1961 0.704076 CCCACCCCTCCTGAAAATCA 59.296 55.000 0.00 0.00 0.00 2.57
1941 1962 0.684479 GCCCACCCCTCCTGAAAATC 60.684 60.000 0.00 0.00 0.00 2.17
1942 1963 1.388133 GCCCACCCCTCCTGAAAAT 59.612 57.895 0.00 0.00 0.00 1.82
1943 1964 2.851045 GCCCACCCCTCCTGAAAA 59.149 61.111 0.00 0.00 0.00 2.29
1944 1965 3.264845 GGCCCACCCCTCCTGAAA 61.265 66.667 0.00 0.00 0.00 2.69
1959 1980 4.171103 AATACGTGGGGAGGCGGC 62.171 66.667 0.00 0.00 0.00 6.53
1960 1981 2.203015 CAATACGTGGGGAGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
1961 1982 1.520787 GTCAATACGTGGGGAGGCG 60.521 63.158 0.00 0.00 0.00 5.52
1962 1983 1.153229 GGTCAATACGTGGGGAGGC 60.153 63.158 0.00 0.00 0.00 4.70
1963 1984 0.616371 TTGGTCAATACGTGGGGAGG 59.384 55.000 0.00 0.00 0.00 4.30
1964 1985 2.093181 TCATTGGTCAATACGTGGGGAG 60.093 50.000 0.00 0.00 0.00 4.30
1965 1986 1.909986 TCATTGGTCAATACGTGGGGA 59.090 47.619 0.00 0.00 0.00 4.81
1966 1987 2.411628 TCATTGGTCAATACGTGGGG 57.588 50.000 0.00 0.00 0.00 4.96
1967 1988 3.343617 ACTTCATTGGTCAATACGTGGG 58.656 45.455 0.00 0.00 0.00 4.61
1968 1989 6.148811 AGTTAACTTCATTGGTCAATACGTGG 59.851 38.462 1.12 0.00 0.00 4.94
1969 1990 7.117812 AGAGTTAACTTCATTGGTCAATACGTG 59.882 37.037 10.02 0.00 0.00 4.49
1970 1991 7.159372 AGAGTTAACTTCATTGGTCAATACGT 58.841 34.615 10.02 0.00 0.00 3.57
1971 1992 7.545965 AGAGAGTTAACTTCATTGGTCAATACG 59.454 37.037 10.02 0.00 0.00 3.06
1972 1993 8.779354 AGAGAGTTAACTTCATTGGTCAATAC 57.221 34.615 10.02 0.00 0.00 1.89
1973 1994 8.816894 AGAGAGAGTTAACTTCATTGGTCAATA 58.183 33.333 10.02 0.00 0.00 1.90
1974 1995 7.605691 CAGAGAGAGTTAACTTCATTGGTCAAT 59.394 37.037 10.02 0.00 0.00 2.57
1975 1996 6.931281 CAGAGAGAGTTAACTTCATTGGTCAA 59.069 38.462 10.02 0.00 0.00 3.18
1976 1997 6.042093 ACAGAGAGAGTTAACTTCATTGGTCA 59.958 38.462 10.02 0.00 0.00 4.02
1977 1998 6.459923 ACAGAGAGAGTTAACTTCATTGGTC 58.540 40.000 10.02 3.53 0.00 4.02
1978 1999 6.426646 ACAGAGAGAGTTAACTTCATTGGT 57.573 37.500 10.02 2.63 0.00 3.67
1979 2000 8.833231 TTTACAGAGAGAGTTAACTTCATTGG 57.167 34.615 10.02 2.01 0.00 3.16
1982 2003 9.660180 GGATTTTACAGAGAGAGTTAACTTCAT 57.340 33.333 10.02 0.00 0.00 2.57
1983 2004 8.871125 AGGATTTTACAGAGAGAGTTAACTTCA 58.129 33.333 10.02 0.00 0.00 3.02
1984 2005 9.145865 CAGGATTTTACAGAGAGAGTTAACTTC 57.854 37.037 10.02 9.24 0.00 3.01
1985 2006 8.652290 ACAGGATTTTACAGAGAGAGTTAACTT 58.348 33.333 10.02 0.00 0.00 2.66
1986 2007 8.196378 ACAGGATTTTACAGAGAGAGTTAACT 57.804 34.615 8.13 8.13 0.00 2.24
1987 2008 9.924650 TTACAGGATTTTACAGAGAGAGTTAAC 57.075 33.333 0.00 0.00 0.00 2.01
1988 2009 9.924650 GTTACAGGATTTTACAGAGAGAGTTAA 57.075 33.333 0.00 0.00 0.00 2.01
1989 2010 9.310449 AGTTACAGGATTTTACAGAGAGAGTTA 57.690 33.333 0.00 0.00 0.00 2.24
1990 2011 8.196378 AGTTACAGGATTTTACAGAGAGAGTT 57.804 34.615 0.00 0.00 0.00 3.01
1991 2012 7.451877 TGAGTTACAGGATTTTACAGAGAGAGT 59.548 37.037 0.00 0.00 0.00 3.24
1992 2013 7.831753 TGAGTTACAGGATTTTACAGAGAGAG 58.168 38.462 0.00 0.00 0.00 3.20
1993 2014 7.776618 TGAGTTACAGGATTTTACAGAGAGA 57.223 36.000 0.00 0.00 0.00 3.10
1994 2015 9.442047 AAATGAGTTACAGGATTTTACAGAGAG 57.558 33.333 0.00 0.00 0.00 3.20
1995 2016 9.219603 CAAATGAGTTACAGGATTTTACAGAGA 57.780 33.333 0.00 0.00 0.00 3.10
1996 2017 9.003658 ACAAATGAGTTACAGGATTTTACAGAG 57.996 33.333 0.00 0.00 0.00 3.35
1997 2018 8.918202 ACAAATGAGTTACAGGATTTTACAGA 57.082 30.769 0.00 0.00 0.00 3.41
1999 2020 8.714179 CGTACAAATGAGTTACAGGATTTTACA 58.286 33.333 0.00 0.00 0.00 2.41
2000 2021 8.715088 ACGTACAAATGAGTTACAGGATTTTAC 58.285 33.333 0.00 0.00 0.00 2.01
2001 2022 8.714179 CACGTACAAATGAGTTACAGGATTTTA 58.286 33.333 0.00 0.00 0.00 1.52
2002 2023 7.227910 ACACGTACAAATGAGTTACAGGATTTT 59.772 33.333 0.00 0.00 0.00 1.82
2003 2024 6.708949 ACACGTACAAATGAGTTACAGGATTT 59.291 34.615 0.00 0.00 0.00 2.17
2004 2025 6.228258 ACACGTACAAATGAGTTACAGGATT 58.772 36.000 0.00 0.00 0.00 3.01
2005 2026 5.790593 ACACGTACAAATGAGTTACAGGAT 58.209 37.500 0.00 0.00 0.00 3.24
2006 2027 5.204409 ACACGTACAAATGAGTTACAGGA 57.796 39.130 0.00 0.00 0.00 3.86
2007 2028 5.061808 GCTACACGTACAAATGAGTTACAGG 59.938 44.000 0.00 0.00 0.00 4.00
2008 2029 5.631929 TGCTACACGTACAAATGAGTTACAG 59.368 40.000 0.00 0.00 0.00 2.74
2009 2030 5.530712 TGCTACACGTACAAATGAGTTACA 58.469 37.500 0.00 0.00 0.00 2.41
2010 2031 6.642683 ATGCTACACGTACAAATGAGTTAC 57.357 37.500 0.00 0.00 0.00 2.50
2011 2032 8.030692 AGTAATGCTACACGTACAAATGAGTTA 58.969 33.333 0.00 0.00 0.00 2.24
2012 2033 6.872020 AGTAATGCTACACGTACAAATGAGTT 59.128 34.615 0.00 0.00 0.00 3.01
2013 2034 6.395629 AGTAATGCTACACGTACAAATGAGT 58.604 36.000 0.00 0.00 0.00 3.41
2014 2035 6.887376 AGTAATGCTACACGTACAAATGAG 57.113 37.500 0.00 0.00 0.00 2.90
2015 2036 7.661127 AAAGTAATGCTACACGTACAAATGA 57.339 32.000 0.00 0.00 0.00 2.57
2016 2037 9.982291 ATAAAAGTAATGCTACACGTACAAATG 57.018 29.630 0.00 0.00 0.00 2.32
2045 2066 9.167311 GATGTATATTCTTGTCAGACCTTTGTT 57.833 33.333 0.00 0.00 0.00 2.83
2046 2067 8.321353 TGATGTATATTCTTGTCAGACCTTTGT 58.679 33.333 0.00 0.00 0.00 2.83
2047 2068 8.722480 TGATGTATATTCTTGTCAGACCTTTG 57.278 34.615 0.00 0.00 0.00 2.77
2048 2069 9.911788 ATTGATGTATATTCTTGTCAGACCTTT 57.088 29.630 0.00 0.00 0.00 3.11
2049 2070 9.553064 GATTGATGTATATTCTTGTCAGACCTT 57.447 33.333 0.00 0.00 0.00 3.50
2050 2071 8.153550 GGATTGATGTATATTCTTGTCAGACCT 58.846 37.037 0.00 0.00 0.00 3.85
2051 2072 7.933577 TGGATTGATGTATATTCTTGTCAGACC 59.066 37.037 0.00 0.00 0.00 3.85
2052 2073 8.893219 TGGATTGATGTATATTCTTGTCAGAC 57.107 34.615 0.00 0.00 0.00 3.51
2053 2074 9.716531 GATGGATTGATGTATATTCTTGTCAGA 57.283 33.333 0.00 0.00 0.00 3.27
2054 2075 9.498176 TGATGGATTGATGTATATTCTTGTCAG 57.502 33.333 0.00 0.00 0.00 3.51
2059 2080 9.159364 CGTGATGATGGATTGATGTATATTCTT 57.841 33.333 0.00 0.00 0.00 2.52
2060 2081 7.279536 GCGTGATGATGGATTGATGTATATTCT 59.720 37.037 0.00 0.00 0.00 2.40
2061 2082 7.064966 TGCGTGATGATGGATTGATGTATATTC 59.935 37.037 0.00 0.00 0.00 1.75
2062 2083 6.880529 TGCGTGATGATGGATTGATGTATATT 59.119 34.615 0.00 0.00 0.00 1.28
2063 2084 6.314648 GTGCGTGATGATGGATTGATGTATAT 59.685 38.462 0.00 0.00 0.00 0.86
2064 2085 5.639082 GTGCGTGATGATGGATTGATGTATA 59.361 40.000 0.00 0.00 0.00 1.47
2065 2086 4.453478 GTGCGTGATGATGGATTGATGTAT 59.547 41.667 0.00 0.00 0.00 2.29
2066 2087 3.809279 GTGCGTGATGATGGATTGATGTA 59.191 43.478 0.00 0.00 0.00 2.29
2067 2088 2.615447 GTGCGTGATGATGGATTGATGT 59.385 45.455 0.00 0.00 0.00 3.06
2068 2089 2.614983 TGTGCGTGATGATGGATTGATG 59.385 45.455 0.00 0.00 0.00 3.07
2069 2090 2.615447 GTGTGCGTGATGATGGATTGAT 59.385 45.455 0.00 0.00 0.00 2.57
2070 2091 2.009051 GTGTGCGTGATGATGGATTGA 58.991 47.619 0.00 0.00 0.00 2.57
2071 2092 1.064505 GGTGTGCGTGATGATGGATTG 59.935 52.381 0.00 0.00 0.00 2.67
2072 2093 1.065199 AGGTGTGCGTGATGATGGATT 60.065 47.619 0.00 0.00 0.00 3.01
2073 2094 0.543277 AGGTGTGCGTGATGATGGAT 59.457 50.000 0.00 0.00 0.00 3.41
2074 2095 1.134818 GTAGGTGTGCGTGATGATGGA 60.135 52.381 0.00 0.00 0.00 3.41
2075 2096 1.290203 GTAGGTGTGCGTGATGATGG 58.710 55.000 0.00 0.00 0.00 3.51
2076 2097 2.008752 TGTAGGTGTGCGTGATGATG 57.991 50.000 0.00 0.00 0.00 3.07
2077 2098 2.742053 GTTTGTAGGTGTGCGTGATGAT 59.258 45.455 0.00 0.00 0.00 2.45
2078 2099 2.139917 GTTTGTAGGTGTGCGTGATGA 58.860 47.619 0.00 0.00 0.00 2.92
2079 2100 2.143122 AGTTTGTAGGTGTGCGTGATG 58.857 47.619 0.00 0.00 0.00 3.07
2080 2101 2.543777 AGTTTGTAGGTGTGCGTGAT 57.456 45.000 0.00 0.00 0.00 3.06
2081 2102 1.937223 CAAGTTTGTAGGTGTGCGTGA 59.063 47.619 0.00 0.00 0.00 4.35
2082 2103 1.937223 TCAAGTTTGTAGGTGTGCGTG 59.063 47.619 0.00 0.00 0.00 5.34
2083 2104 2.319136 TCAAGTTTGTAGGTGTGCGT 57.681 45.000 0.00 0.00 0.00 5.24
2084 2105 5.106712 ACATTATCAAGTTTGTAGGTGTGCG 60.107 40.000 0.00 0.00 0.00 5.34
2085 2106 6.072728 TCACATTATCAAGTTTGTAGGTGTGC 60.073 38.462 13.13 0.00 34.75 4.57
2086 2107 7.433708 TCACATTATCAAGTTTGTAGGTGTG 57.566 36.000 12.39 12.39 35.74 3.82
2087 2108 7.719633 ACTTCACATTATCAAGTTTGTAGGTGT 59.280 33.333 0.00 0.00 0.00 4.16
2088 2109 8.017373 CACTTCACATTATCAAGTTTGTAGGTG 58.983 37.037 0.00 0.00 0.00 4.00
2089 2110 7.308589 GCACTTCACATTATCAAGTTTGTAGGT 60.309 37.037 0.00 0.00 0.00 3.08
2090 2111 7.023575 GCACTTCACATTATCAAGTTTGTAGG 58.976 38.462 0.00 0.00 0.00 3.18
2091 2112 7.810658 AGCACTTCACATTATCAAGTTTGTAG 58.189 34.615 0.00 0.00 0.00 2.74
2092 2113 7.661437 AGAGCACTTCACATTATCAAGTTTGTA 59.339 33.333 0.00 0.00 0.00 2.41
2093 2114 6.488006 AGAGCACTTCACATTATCAAGTTTGT 59.512 34.615 0.00 0.00 0.00 2.83
2094 2115 6.906659 AGAGCACTTCACATTATCAAGTTTG 58.093 36.000 0.00 0.00 0.00 2.93
2095 2116 6.712095 TGAGAGCACTTCACATTATCAAGTTT 59.288 34.615 0.00 0.00 0.00 2.66
2096 2117 6.148480 GTGAGAGCACTTCACATTATCAAGTT 59.852 38.462 9.52 0.00 41.84 2.66
2097 2118 5.641209 GTGAGAGCACTTCACATTATCAAGT 59.359 40.000 9.52 0.00 41.84 3.16
2098 2119 6.104439 GTGAGAGCACTTCACATTATCAAG 57.896 41.667 9.52 0.00 41.84 3.02
2112 2133 6.398234 TTTAGATATGGAGAGTGAGAGCAC 57.602 41.667 0.00 0.00 45.49 4.40
2113 2134 7.522889 CGATTTTAGATATGGAGAGTGAGAGCA 60.523 40.741 0.00 0.00 0.00 4.26
2114 2135 6.806249 CGATTTTAGATATGGAGAGTGAGAGC 59.194 42.308 0.00 0.00 0.00 4.09
2115 2136 7.040062 ACCGATTTTAGATATGGAGAGTGAGAG 60.040 40.741 0.00 0.00 0.00 3.20
2116 2137 6.778069 ACCGATTTTAGATATGGAGAGTGAGA 59.222 38.462 0.00 0.00 0.00 3.27
2117 2138 6.865726 CACCGATTTTAGATATGGAGAGTGAG 59.134 42.308 0.00 0.00 0.00 3.51
2118 2139 6.323996 ACACCGATTTTAGATATGGAGAGTGA 59.676 38.462 0.00 0.00 0.00 3.41
2119 2140 6.516718 ACACCGATTTTAGATATGGAGAGTG 58.483 40.000 0.00 0.00 0.00 3.51
2120 2141 6.323996 TGACACCGATTTTAGATATGGAGAGT 59.676 38.462 0.00 0.00 0.00 3.24
2121 2142 6.749139 TGACACCGATTTTAGATATGGAGAG 58.251 40.000 0.00 0.00 0.00 3.20
2122 2143 6.724893 TGACACCGATTTTAGATATGGAGA 57.275 37.500 0.00 0.00 0.00 3.71
2123 2144 6.309009 CGATGACACCGATTTTAGATATGGAG 59.691 42.308 0.00 0.00 0.00 3.86
2124 2145 6.156519 CGATGACACCGATTTTAGATATGGA 58.843 40.000 0.00 0.00 0.00 3.41
2125 2146 5.926542 ACGATGACACCGATTTTAGATATGG 59.073 40.000 0.00 0.00 0.00 2.74
2126 2147 6.183359 CGACGATGACACCGATTTTAGATATG 60.183 42.308 0.00 0.00 0.00 1.78
2127 2148 5.856986 CGACGATGACACCGATTTTAGATAT 59.143 40.000 0.00 0.00 0.00 1.63
2128 2149 5.007921 TCGACGATGACACCGATTTTAGATA 59.992 40.000 0.00 0.00 0.00 1.98
2129 2150 4.042398 CGACGATGACACCGATTTTAGAT 58.958 43.478 0.00 0.00 0.00 1.98
2130 2151 3.127376 TCGACGATGACACCGATTTTAGA 59.873 43.478 0.00 0.00 0.00 2.10
2131 2152 3.431856 TCGACGATGACACCGATTTTAG 58.568 45.455 0.00 0.00 0.00 1.85
2132 2153 3.490800 TCGACGATGACACCGATTTTA 57.509 42.857 0.00 0.00 0.00 1.52
2133 2154 2.357327 TCGACGATGACACCGATTTT 57.643 45.000 0.00 0.00 0.00 1.82
2134 2155 2.460918 GATCGACGATGACACCGATTT 58.539 47.619 16.49 0.00 41.17 2.17
2135 2156 1.269102 GGATCGACGATGACACCGATT 60.269 52.381 16.49 0.00 41.17 3.34
2136 2157 0.311165 GGATCGACGATGACACCGAT 59.689 55.000 16.49 0.00 43.38 4.18
2137 2158 1.027792 TGGATCGACGATGACACCGA 61.028 55.000 16.49 0.00 35.43 4.69
2138 2159 0.030773 ATGGATCGACGATGACACCG 59.969 55.000 16.49 0.00 0.00 4.94
2139 2160 1.603172 GGATGGATCGACGATGACACC 60.603 57.143 16.49 10.60 0.00 4.16
2140 2161 1.067060 TGGATGGATCGACGATGACAC 59.933 52.381 16.49 8.58 0.00 3.67
2141 2162 1.398692 TGGATGGATCGACGATGACA 58.601 50.000 16.49 14.10 0.00 3.58
2142 2163 2.288457 ACATGGATGGATCGACGATGAC 60.288 50.000 16.49 8.56 0.00 3.06
2143 2164 1.963515 ACATGGATGGATCGACGATGA 59.036 47.619 16.49 1.54 0.00 2.92
2144 2165 2.445565 ACATGGATGGATCGACGATG 57.554 50.000 16.49 1.91 0.00 3.84
2145 2166 3.320826 TGTTACATGGATGGATCGACGAT 59.679 43.478 10.78 10.78 0.00 3.73
2146 2167 2.691011 TGTTACATGGATGGATCGACGA 59.309 45.455 0.00 0.00 0.00 4.20
2147 2168 3.092334 TGTTACATGGATGGATCGACG 57.908 47.619 0.00 0.00 0.00 5.12
2148 2169 5.527214 TGATTTGTTACATGGATGGATCGAC 59.473 40.000 0.00 0.00 0.00 4.20
2149 2170 5.679601 TGATTTGTTACATGGATGGATCGA 58.320 37.500 0.00 0.00 0.00 3.59
2150 2171 5.759763 TCTGATTTGTTACATGGATGGATCG 59.240 40.000 0.00 0.00 0.00 3.69
2151 2172 7.420800 GTTCTGATTTGTTACATGGATGGATC 58.579 38.462 0.00 0.00 0.00 3.36
2152 2173 6.322201 GGTTCTGATTTGTTACATGGATGGAT 59.678 38.462 0.00 0.00 0.00 3.41
2153 2174 5.652014 GGTTCTGATTTGTTACATGGATGGA 59.348 40.000 0.00 0.00 0.00 3.41
2154 2175 5.418524 TGGTTCTGATTTGTTACATGGATGG 59.581 40.000 0.00 0.00 0.00 3.51
2155 2176 6.513806 TGGTTCTGATTTGTTACATGGATG 57.486 37.500 0.00 0.00 0.00 3.51
2156 2177 6.493115 TGTTGGTTCTGATTTGTTACATGGAT 59.507 34.615 0.00 0.00 0.00 3.41
2157 2178 5.830457 TGTTGGTTCTGATTTGTTACATGGA 59.170 36.000 0.00 0.00 0.00 3.41
2158 2179 6.083098 TGTTGGTTCTGATTTGTTACATGG 57.917 37.500 0.00 0.00 0.00 3.66
2159 2180 5.630680 GCTGTTGGTTCTGATTTGTTACATG 59.369 40.000 0.00 0.00 0.00 3.21
2160 2181 5.278957 GGCTGTTGGTTCTGATTTGTTACAT 60.279 40.000 0.00 0.00 0.00 2.29
2161 2182 4.037446 GGCTGTTGGTTCTGATTTGTTACA 59.963 41.667 0.00 0.00 0.00 2.41
2162 2183 4.546570 GGCTGTTGGTTCTGATTTGTTAC 58.453 43.478 0.00 0.00 0.00 2.50
2163 2184 3.252215 CGGCTGTTGGTTCTGATTTGTTA 59.748 43.478 0.00 0.00 0.00 2.41
2164 2185 2.034558 CGGCTGTTGGTTCTGATTTGTT 59.965 45.455 0.00 0.00 0.00 2.83
2165 2186 1.608590 CGGCTGTTGGTTCTGATTTGT 59.391 47.619 0.00 0.00 0.00 2.83
2166 2187 1.608590 ACGGCTGTTGGTTCTGATTTG 59.391 47.619 0.00 0.00 0.00 2.32
2167 2188 1.981256 ACGGCTGTTGGTTCTGATTT 58.019 45.000 0.00 0.00 0.00 2.17
2168 2189 1.981256 AACGGCTGTTGGTTCTGATT 58.019 45.000 10.90 0.00 36.81 2.57
2169 2190 3.725754 AACGGCTGTTGGTTCTGAT 57.274 47.368 10.90 0.00 36.81 2.90
2178 2199 2.203195 TCTGCTGCAACGGCTGTT 60.203 55.556 4.68 4.68 41.91 3.16
2179 2200 2.974698 GTCTGCTGCAACGGCTGT 60.975 61.111 3.02 0.00 41.91 4.40
2180 2201 2.786539 TAGGTCTGCTGCAACGGCTG 62.787 60.000 3.02 0.00 41.91 4.85
2181 2202 2.111999 TTAGGTCTGCTGCAACGGCT 62.112 55.000 3.02 2.23 41.91 5.52
2182 2203 1.234615 TTTAGGTCTGCTGCAACGGC 61.235 55.000 3.02 0.00 41.68 5.68
2183 2204 0.798776 CTTTAGGTCTGCTGCAACGG 59.201 55.000 3.02 0.00 0.00 4.44
2184 2205 0.166814 GCTTTAGGTCTGCTGCAACG 59.833 55.000 3.02 0.00 0.00 4.10
2185 2206 1.068954 GTGCTTTAGGTCTGCTGCAAC 60.069 52.381 3.02 5.17 32.10 4.17
2186 2207 1.238439 GTGCTTTAGGTCTGCTGCAA 58.762 50.000 3.02 0.00 32.10 4.08
2187 2208 0.108396 TGTGCTTTAGGTCTGCTGCA 59.892 50.000 0.88 0.88 0.00 4.41
2188 2209 0.519077 GTGTGCTTTAGGTCTGCTGC 59.481 55.000 0.00 0.00 0.00 5.25
2189 2210 1.882912 TGTGTGCTTTAGGTCTGCTG 58.117 50.000 0.00 0.00 0.00 4.41
2190 2211 2.038952 TGATGTGTGCTTTAGGTCTGCT 59.961 45.455 0.00 0.00 0.00 4.24
2191 2212 2.426522 TGATGTGTGCTTTAGGTCTGC 58.573 47.619 0.00 0.00 0.00 4.26
2192 2213 6.986231 TGTATATGATGTGTGCTTTAGGTCTG 59.014 38.462 0.00 0.00 0.00 3.51
2193 2214 6.986817 GTGTATATGATGTGTGCTTTAGGTCT 59.013 38.462 0.00 0.00 0.00 3.85
2194 2215 6.761242 TGTGTATATGATGTGTGCTTTAGGTC 59.239 38.462 0.00 0.00 0.00 3.85
2195 2216 6.538742 GTGTGTATATGATGTGTGCTTTAGGT 59.461 38.462 0.00 0.00 0.00 3.08
2196 2217 6.292328 CGTGTGTATATGATGTGTGCTTTAGG 60.292 42.308 0.00 0.00 0.00 2.69
2197 2218 6.255670 ACGTGTGTATATGATGTGTGCTTTAG 59.744 38.462 0.00 0.00 0.00 1.85
2198 2219 6.103330 ACGTGTGTATATGATGTGTGCTTTA 58.897 36.000 0.00 0.00 0.00 1.85
2199 2220 4.935205 ACGTGTGTATATGATGTGTGCTTT 59.065 37.500 0.00 0.00 0.00 3.51
2200 2221 4.503910 ACGTGTGTATATGATGTGTGCTT 58.496 39.130 0.00 0.00 0.00 3.91
2201 2222 4.123497 ACGTGTGTATATGATGTGTGCT 57.877 40.909 0.00 0.00 0.00 4.40
2202 2223 4.857871 AACGTGTGTATATGATGTGTGC 57.142 40.909 0.00 0.00 0.00 4.57
2203 2224 8.180317 TCTAAAACGTGTGTATATGATGTGTG 57.820 34.615 0.00 0.00 0.00 3.82
2204 2225 8.766000 TTCTAAAACGTGTGTATATGATGTGT 57.234 30.769 0.00 0.00 0.00 3.72
2205 2226 9.083080 TCTTCTAAAACGTGTGTATATGATGTG 57.917 33.333 0.00 0.00 0.00 3.21
2206 2227 9.084164 GTCTTCTAAAACGTGTGTATATGATGT 57.916 33.333 0.00 0.00 0.00 3.06
2207 2228 8.259872 CGTCTTCTAAAACGTGTGTATATGATG 58.740 37.037 0.00 0.00 34.30 3.07
2208 2229 7.043590 GCGTCTTCTAAAACGTGTGTATATGAT 60.044 37.037 0.00 0.00 40.87 2.45
2209 2230 6.252015 GCGTCTTCTAAAACGTGTGTATATGA 59.748 38.462 0.00 0.00 40.87 2.15
2210 2231 6.400422 GCGTCTTCTAAAACGTGTGTATATG 58.600 40.000 0.00 0.00 40.87 1.78
2211 2232 5.517770 GGCGTCTTCTAAAACGTGTGTATAT 59.482 40.000 0.00 0.00 40.87 0.86
2212 2233 4.858692 GGCGTCTTCTAAAACGTGTGTATA 59.141 41.667 0.00 0.00 40.87 1.47
2213 2234 3.676646 GGCGTCTTCTAAAACGTGTGTAT 59.323 43.478 0.00 0.00 40.87 2.29
2214 2235 3.052036 GGCGTCTTCTAAAACGTGTGTA 58.948 45.455 0.00 0.00 40.87 2.90
2215 2236 1.862827 GGCGTCTTCTAAAACGTGTGT 59.137 47.619 0.00 0.00 40.87 3.72
2216 2237 1.862201 TGGCGTCTTCTAAAACGTGTG 59.138 47.619 0.00 0.00 40.87 3.82
2217 2238 2.228138 TGGCGTCTTCTAAAACGTGT 57.772 45.000 0.00 0.00 40.87 4.49
2218 2239 2.093783 GGATGGCGTCTTCTAAAACGTG 59.906 50.000 6.67 0.00 40.87 4.49
2219 2240 2.344025 GGATGGCGTCTTCTAAAACGT 58.656 47.619 6.67 0.00 40.87 3.99
2220 2241 1.664151 GGGATGGCGTCTTCTAAAACG 59.336 52.381 6.67 0.00 41.68 3.60
2221 2242 2.014857 GGGGATGGCGTCTTCTAAAAC 58.985 52.381 6.67 0.00 0.00 2.43
2222 2243 1.631388 TGGGGATGGCGTCTTCTAAAA 59.369 47.619 6.67 0.00 0.00 1.52
2223 2244 1.281419 TGGGGATGGCGTCTTCTAAA 58.719 50.000 6.67 0.00 0.00 1.85
2224 2245 1.416401 GATGGGGATGGCGTCTTCTAA 59.584 52.381 6.67 0.00 0.00 2.10
2225 2246 1.048601 GATGGGGATGGCGTCTTCTA 58.951 55.000 6.67 0.00 0.00 2.10
2226 2247 0.692419 AGATGGGGATGGCGTCTTCT 60.692 55.000 6.67 2.02 0.00 2.85
2227 2248 0.533755 CAGATGGGGATGGCGTCTTC 60.534 60.000 6.67 0.00 0.00 2.87
2228 2249 0.982852 TCAGATGGGGATGGCGTCTT 60.983 55.000 6.67 0.00 0.00 3.01
2229 2250 1.383109 TCAGATGGGGATGGCGTCT 60.383 57.895 6.67 0.00 0.00 4.18
2230 2251 1.227674 GTCAGATGGGGATGGCGTC 60.228 63.158 0.00 0.00 0.00 5.19
2231 2252 2.746375 GGTCAGATGGGGATGGCGT 61.746 63.158 0.00 0.00 0.00 5.68
2232 2253 2.111878 GGTCAGATGGGGATGGCG 59.888 66.667 0.00 0.00 0.00 5.69
2233 2254 1.152881 GTGGTCAGATGGGGATGGC 60.153 63.158 0.00 0.00 0.00 4.40
2234 2255 1.806496 TAGTGGTCAGATGGGGATGG 58.194 55.000 0.00 0.00 0.00 3.51
2235 2256 2.158755 GGTTAGTGGTCAGATGGGGATG 60.159 54.545 0.00 0.00 0.00 3.51
2236 2257 2.127708 GGTTAGTGGTCAGATGGGGAT 58.872 52.381 0.00 0.00 0.00 3.85
2237 2258 1.580059 GGTTAGTGGTCAGATGGGGA 58.420 55.000 0.00 0.00 0.00 4.81
2238 2259 0.546598 GGGTTAGTGGTCAGATGGGG 59.453 60.000 0.00 0.00 0.00 4.96
2239 2260 1.285280 TGGGTTAGTGGTCAGATGGG 58.715 55.000 0.00 0.00 0.00 4.00
2240 2261 2.774234 AGATGGGTTAGTGGTCAGATGG 59.226 50.000 0.00 0.00 0.00 3.51
2241 2262 4.080919 TGAAGATGGGTTAGTGGTCAGATG 60.081 45.833 0.00 0.00 0.00 2.90
2242 2263 4.104086 TGAAGATGGGTTAGTGGTCAGAT 58.896 43.478 0.00 0.00 0.00 2.90
2243 2264 3.515502 CTGAAGATGGGTTAGTGGTCAGA 59.484 47.826 0.00 0.00 34.50 3.27
2244 2265 3.515502 TCTGAAGATGGGTTAGTGGTCAG 59.484 47.826 0.00 0.00 34.01 3.51
2245 2266 3.516586 TCTGAAGATGGGTTAGTGGTCA 58.483 45.455 0.00 0.00 0.00 4.02
2246 2267 4.223032 TCTTCTGAAGATGGGTTAGTGGTC 59.777 45.833 15.82 0.00 31.20 4.02
2247 2268 4.168101 TCTTCTGAAGATGGGTTAGTGGT 58.832 43.478 15.82 0.00 31.20 4.16
2248 2269 4.467795 TCTCTTCTGAAGATGGGTTAGTGG 59.532 45.833 19.61 5.30 36.82 4.00
2249 2270 5.420421 TCTCTCTTCTGAAGATGGGTTAGTG 59.580 44.000 19.61 8.06 36.82 2.74
2250 2271 5.584913 TCTCTCTTCTGAAGATGGGTTAGT 58.415 41.667 19.61 0.00 36.82 2.24
2251 2272 6.729690 ATCTCTCTTCTGAAGATGGGTTAG 57.270 41.667 19.61 7.30 36.82 2.34
2252 2273 6.183360 CGAATCTCTCTTCTGAAGATGGGTTA 60.183 42.308 19.61 4.48 36.82 2.85
2253 2274 5.395103 CGAATCTCTCTTCTGAAGATGGGTT 60.395 44.000 19.61 16.33 36.82 4.11
2254 2275 4.099266 CGAATCTCTCTTCTGAAGATGGGT 59.901 45.833 19.61 9.55 36.82 4.51
2255 2276 4.619973 CGAATCTCTCTTCTGAAGATGGG 58.380 47.826 19.61 13.64 36.82 4.00
2256 2277 4.050553 GCGAATCTCTCTTCTGAAGATGG 58.949 47.826 19.61 14.72 36.82 3.51
2257 2278 4.680702 TGCGAATCTCTCTTCTGAAGATG 58.319 43.478 19.61 15.09 36.82 2.90
2258 2279 4.998671 TGCGAATCTCTCTTCTGAAGAT 57.001 40.909 19.61 5.42 36.82 2.40
2259 2280 4.400567 TGATGCGAATCTCTCTTCTGAAGA 59.599 41.667 18.40 18.40 35.87 2.87
2260 2281 4.680702 TGATGCGAATCTCTCTTCTGAAG 58.319 43.478 11.18 11.18 0.00 3.02
2261 2282 4.725790 TGATGCGAATCTCTCTTCTGAA 57.274 40.909 4.68 0.00 0.00 3.02
2262 2283 4.261952 GGATGATGCGAATCTCTCTTCTGA 60.262 45.833 4.68 0.00 0.00 3.27
2263 2284 3.989167 GGATGATGCGAATCTCTCTTCTG 59.011 47.826 4.68 0.00 0.00 3.02
2264 2285 3.896888 AGGATGATGCGAATCTCTCTTCT 59.103 43.478 4.68 0.00 0.00 2.85
2265 2286 4.255833 AGGATGATGCGAATCTCTCTTC 57.744 45.455 4.68 0.00 0.00 2.87
2266 2287 4.686191 AAGGATGATGCGAATCTCTCTT 57.314 40.909 4.68 2.79 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.