Multiple sequence alignment - TraesCS2A01G289800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G289800 chr2A 100.000 5636 0 0 1 5636 498109703 498104068 0.000000e+00 10408.0
1 TraesCS2A01G289800 chr2A 96.154 286 11 0 1 286 544283890 544284175 8.550000e-128 468.0
2 TraesCS2A01G289800 chr2B 94.201 4518 158 47 558 5024 437011693 437007229 0.000000e+00 6796.0
3 TraesCS2A01G289800 chr2B 79.374 543 45 23 5131 5636 437007222 437006710 2.530000e-83 320.0
4 TraesCS2A01G289800 chr2B 95.946 74 3 0 1338 1411 245731124 245731197 2.760000e-23 121.0
5 TraesCS2A01G289800 chr2D 96.316 1873 51 10 3189 5055 368011068 368009208 0.000000e+00 3061.0
6 TraesCS2A01G289800 chr2D 95.043 1735 62 14 1415 3141 368012782 368011064 0.000000e+00 2706.0
7 TraesCS2A01G289800 chr2D 92.424 792 36 10 558 1334 368013566 368012784 0.000000e+00 1109.0
8 TraesCS2A01G289800 chr2D 90.528 549 20 7 5097 5636 368008784 368008259 0.000000e+00 697.0
9 TraesCS2A01G289800 chr2D 88.356 292 16 10 289 572 368013876 368013595 9.050000e-88 335.0
10 TraesCS2A01G289800 chr6A 95.189 291 12 2 1 290 85028104 85028393 5.150000e-125 459.0
11 TraesCS2A01G289800 chr6A 91.765 85 6 1 1328 1411 495679405 495679321 3.570000e-22 117.0
12 TraesCS2A01G289800 chr6A 89.796 49 4 1 5023 5070 373119219 373119267 1.700000e-05 62.1
13 TraesCS2A01G289800 chr3D 94.915 295 8 3 1 288 543807085 543807379 6.660000e-124 455.0
14 TraesCS2A01G289800 chr1A 95.439 285 13 0 1 285 32295213 32294929 6.660000e-124 455.0
15 TraesCS2A01G289800 chr1D 94.386 285 16 0 1 285 494347725 494348009 6.700000e-119 438.0
16 TraesCS2A01G289800 chr1D 97.297 37 0 1 5024 5059 464299223 464299259 1.700000e-05 62.1
17 TraesCS2A01G289800 chr5A 94.056 286 16 1 1 285 703350762 703350477 3.120000e-117 433.0
18 TraesCS2A01G289800 chr5A 96.552 58 2 0 5072 5129 59700855 59700798 4.650000e-16 97.1
19 TraesCS2A01G289800 chr5D 94.306 281 16 0 1 281 539147129 539147409 1.120000e-116 431.0
20 TraesCS2A01G289800 chr5D 97.297 74 2 0 1338 1411 536531047 536530974 5.930000e-25 126.0
21 TraesCS2A01G289800 chr5D 96.000 75 3 0 1338 1412 162424872 162424946 7.670000e-24 122.0
22 TraesCS2A01G289800 chr5D 94.915 59 3 0 5071 5129 188826593 188826535 6.010000e-15 93.5
23 TraesCS2A01G289800 chr1B 93.310 284 17 2 1 284 172015089 172015370 8.730000e-113 418.0
24 TraesCS2A01G289800 chr1B 96.000 75 3 0 1338 1412 569426969 569426895 7.670000e-24 122.0
25 TraesCS2A01G289800 chr3A 92.414 290 17 1 1 285 671004232 671003943 5.260000e-110 409.0
26 TraesCS2A01G289800 chr3A 100.000 28 0 0 5043 5070 9520109 9520136 1.000000e-02 52.8
27 TraesCS2A01G289800 chr7D 96.000 75 3 0 1338 1412 17861670 17861744 7.670000e-24 122.0
28 TraesCS2A01G289800 chr7D 95.000 60 3 0 5070 5129 64533053 64533112 1.670000e-15 95.3
29 TraesCS2A01G289800 chr5B 91.667 84 7 0 1338 1421 137656285 137656368 3.570000e-22 117.0
30 TraesCS2A01G289800 chr5B 96.610 59 2 0 5071 5129 484883343 484883285 1.290000e-16 99.0
31 TraesCS2A01G289800 chr4A 91.667 84 7 0 1328 1411 715012895 715012978 3.570000e-22 117.0
32 TraesCS2A01G289800 chr4A 96.721 61 2 0 5072 5132 618462231 618462171 9.990000e-18 102.0
33 TraesCS2A01G289800 chr4A 96.610 59 2 0 5071 5129 594030131 594030189 1.290000e-16 99.0
34 TraesCS2A01G289800 chr7B 94.915 59 3 0 5071 5129 428965871 428965929 6.010000e-15 93.5
35 TraesCS2A01G289800 chr6D 94.915 59 3 0 5071 5129 357578380 357578322 6.010000e-15 93.5
36 TraesCS2A01G289800 chr6B 93.878 49 2 1 5023 5070 408244949 408244997 7.830000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G289800 chr2A 498104068 498109703 5635 True 10408.0 10408 100.0000 1 5636 1 chr2A.!!$R1 5635
1 TraesCS2A01G289800 chr2B 437006710 437011693 4983 True 3558.0 6796 86.7875 558 5636 2 chr2B.!!$R1 5078
2 TraesCS2A01G289800 chr2D 368008259 368013876 5617 True 1581.6 3061 92.5334 289 5636 5 chr2D.!!$R1 5347

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.034059 CAGGTCGGCCTATGGTCATC 59.966 60.0 9.07 0.0 44.97 2.92 F
222 223 0.036164 TCCGTGGTGTGAGGAATTGG 59.964 55.0 0.00 0.0 0.00 3.16 F
223 224 0.250727 CCGTGGTGTGAGGAATTGGT 60.251 55.0 0.00 0.0 0.00 3.67 F
276 277 0.404040 AAACATCCTTTCTCCCCGCA 59.596 50.0 0.00 0.0 0.00 5.69 F
499 503 0.537188 ATTGACCTCTCGCCAATCGT 59.463 50.0 0.00 0.0 39.67 3.73 F
1131 1204 0.605319 TGCAGGTTTCCGATGGTGTC 60.605 55.0 0.00 0.0 0.00 3.67 F
1132 1205 0.605319 GCAGGTTTCCGATGGTGTCA 60.605 55.0 0.00 0.0 0.00 3.58 F
1855 1933 1.269012 CATGGCCCACTCACCAATTT 58.731 50.0 0.00 0.0 39.96 1.82 F
3325 3419 0.865111 TTGTCTCCACGCATTTGTCG 59.135 50.0 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1132 1205 0.392193 CGAGCTGCCTGTTCTTGGAT 60.392 55.000 0.00 0.00 0.00 3.41 R
1523 1598 1.535462 GAACACGCTTATTGGCTGTGT 59.465 47.619 9.72 9.72 44.60 3.72 R
1537 1612 3.304559 GTGCTAGCAGATTACAGAACACG 59.695 47.826 20.03 0.00 0.00 4.49 R
1645 1722 4.250464 TGATACGTCATTGAGTTTCCACC 58.750 43.478 0.00 0.00 0.00 4.61 R
2396 2484 3.081804 CCCACCAGAACAAGATGTAACC 58.918 50.000 0.00 0.00 0.00 2.85 R
2879 2971 2.212812 TGTGGCCAATCAGCACATTA 57.787 45.000 7.24 0.00 0.00 1.90 R
2892 2984 3.243704 TGCACTAAACAGAAAATGTGGCC 60.244 43.478 0.00 0.00 43.00 5.36 R
3516 3612 2.673610 GCAACACCAAACTGCTCAAACA 60.674 45.455 0.00 0.00 33.20 2.83 R
5267 5767 0.169672 CGCTGGAAGATTGCCAACAG 59.830 55.000 0.00 0.00 34.07 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.519771 TCTTCAAATGCTCTGGCCAT 57.480 45.000 5.51 0.00 37.74 4.40
20 21 2.811410 TCTTCAAATGCTCTGGCCATT 58.189 42.857 5.51 0.00 37.74 3.16
21 22 2.756760 TCTTCAAATGCTCTGGCCATTC 59.243 45.455 5.51 0.00 37.74 2.67
22 23 2.519771 TCAAATGCTCTGGCCATTCT 57.480 45.000 5.51 0.00 37.74 2.40
23 24 2.372264 TCAAATGCTCTGGCCATTCTC 58.628 47.619 5.51 0.00 37.74 2.87
24 25 2.025605 TCAAATGCTCTGGCCATTCTCT 60.026 45.455 5.51 0.00 37.74 3.10
25 26 2.345124 AATGCTCTGGCCATTCTCTC 57.655 50.000 5.51 0.00 37.74 3.20
26 27 0.106335 ATGCTCTGGCCATTCTCTCG 59.894 55.000 5.51 0.00 37.74 4.04
27 28 0.972471 TGCTCTGGCCATTCTCTCGA 60.972 55.000 5.51 0.00 37.74 4.04
28 29 0.249405 GCTCTGGCCATTCTCTCGAG 60.249 60.000 5.51 8.89 0.00 4.04
29 30 0.249405 CTCTGGCCATTCTCTCGAGC 60.249 60.000 5.51 0.00 0.00 5.03
30 31 1.591059 CTGGCCATTCTCTCGAGCG 60.591 63.158 5.51 0.48 0.00 5.03
31 32 2.009424 CTGGCCATTCTCTCGAGCGA 62.009 60.000 5.51 3.72 0.00 4.93
32 33 1.590259 GGCCATTCTCTCGAGCGAC 60.590 63.158 7.81 0.00 0.00 5.19
33 34 1.139734 GCCATTCTCTCGAGCGACA 59.860 57.895 7.81 0.00 0.00 4.35
34 35 0.458543 GCCATTCTCTCGAGCGACAA 60.459 55.000 7.81 0.00 0.00 3.18
35 36 1.804372 GCCATTCTCTCGAGCGACAAT 60.804 52.381 7.81 0.00 0.00 2.71
36 37 2.123342 CCATTCTCTCGAGCGACAATC 58.877 52.381 7.81 0.00 0.00 2.67
37 38 2.223688 CCATTCTCTCGAGCGACAATCT 60.224 50.000 7.81 0.00 0.00 2.40
38 39 3.443037 CATTCTCTCGAGCGACAATCTT 58.557 45.455 7.81 0.00 0.00 2.40
39 40 3.577649 TTCTCTCGAGCGACAATCTTT 57.422 42.857 7.81 0.00 0.00 2.52
40 41 3.577649 TCTCTCGAGCGACAATCTTTT 57.422 42.857 7.81 0.00 0.00 2.27
41 42 3.502920 TCTCTCGAGCGACAATCTTTTC 58.497 45.455 7.81 0.00 0.00 2.29
42 43 3.057526 TCTCTCGAGCGACAATCTTTTCA 60.058 43.478 7.81 0.00 0.00 2.69
43 44 3.245797 TCTCGAGCGACAATCTTTTCAG 58.754 45.455 7.81 0.00 0.00 3.02
44 45 2.337583 TCGAGCGACAATCTTTTCAGG 58.662 47.619 0.00 0.00 0.00 3.86
45 46 2.069273 CGAGCGACAATCTTTTCAGGT 58.931 47.619 0.00 0.00 0.00 4.00
46 47 2.092838 CGAGCGACAATCTTTTCAGGTC 59.907 50.000 0.00 0.00 0.00 3.85
49 50 1.128692 CGACAATCTTTTCAGGTCGGC 59.871 52.381 0.00 0.00 45.36 5.54
50 51 1.468914 GACAATCTTTTCAGGTCGGCC 59.531 52.381 0.00 0.00 0.00 6.13
52 53 2.304761 ACAATCTTTTCAGGTCGGCCTA 59.695 45.455 9.07 0.00 44.97 3.93
53 54 3.054361 ACAATCTTTTCAGGTCGGCCTAT 60.054 43.478 9.07 0.00 44.97 2.57
54 55 2.691409 TCTTTTCAGGTCGGCCTATG 57.309 50.000 9.07 0.00 44.97 2.23
55 56 1.209504 TCTTTTCAGGTCGGCCTATGG 59.790 52.381 9.07 0.00 44.97 2.74
56 57 0.988832 TTTTCAGGTCGGCCTATGGT 59.011 50.000 9.07 0.00 44.97 3.55
57 58 0.539986 TTTCAGGTCGGCCTATGGTC 59.460 55.000 9.07 0.00 44.97 4.02
58 59 0.616395 TTCAGGTCGGCCTATGGTCA 60.616 55.000 9.07 0.00 44.97 4.02
59 60 0.398522 TCAGGTCGGCCTATGGTCAT 60.399 55.000 9.07 0.00 44.97 3.06
60 61 0.034059 CAGGTCGGCCTATGGTCATC 59.966 60.000 9.07 0.00 44.97 2.92
61 62 0.105453 AGGTCGGCCTATGGTCATCT 60.105 55.000 6.89 0.00 44.90 2.90
62 63 1.147191 AGGTCGGCCTATGGTCATCTA 59.853 52.381 6.89 0.00 44.90 1.98
63 64 1.546476 GGTCGGCCTATGGTCATCTAG 59.454 57.143 0.00 0.00 0.00 2.43
64 65 1.067495 GTCGGCCTATGGTCATCTAGC 60.067 57.143 0.00 0.00 0.00 3.42
65 66 1.203063 TCGGCCTATGGTCATCTAGCT 60.203 52.381 0.00 0.00 0.00 3.32
66 67 1.067283 CGGCCTATGGTCATCTAGCTG 60.067 57.143 0.00 0.00 0.00 4.24
67 68 1.338579 GGCCTATGGTCATCTAGCTGC 60.339 57.143 0.00 0.00 0.00 5.25
68 69 1.622811 GCCTATGGTCATCTAGCTGCT 59.377 52.381 7.57 7.57 0.00 4.24
69 70 2.612471 GCCTATGGTCATCTAGCTGCTG 60.612 54.545 13.43 2.51 0.00 4.41
70 71 2.896044 CCTATGGTCATCTAGCTGCTGA 59.104 50.000 13.43 8.28 0.00 4.26
71 72 3.323115 CCTATGGTCATCTAGCTGCTGAA 59.677 47.826 13.43 0.00 0.00 3.02
72 73 3.920231 ATGGTCATCTAGCTGCTGAAA 57.080 42.857 13.43 0.00 0.00 2.69
73 74 3.920231 TGGTCATCTAGCTGCTGAAAT 57.080 42.857 13.43 0.00 0.00 2.17
74 75 4.226427 TGGTCATCTAGCTGCTGAAATT 57.774 40.909 13.43 0.00 0.00 1.82
75 76 5.357742 TGGTCATCTAGCTGCTGAAATTA 57.642 39.130 13.43 0.00 0.00 1.40
76 77 5.744171 TGGTCATCTAGCTGCTGAAATTAA 58.256 37.500 13.43 0.00 0.00 1.40
77 78 6.179756 TGGTCATCTAGCTGCTGAAATTAAA 58.820 36.000 13.43 0.00 0.00 1.52
78 79 6.317140 TGGTCATCTAGCTGCTGAAATTAAAG 59.683 38.462 13.43 0.00 0.00 1.85
79 80 6.197981 GTCATCTAGCTGCTGAAATTAAAGC 58.802 40.000 13.43 5.53 39.96 3.51
80 81 6.038050 GTCATCTAGCTGCTGAAATTAAAGCT 59.962 38.462 13.43 8.86 45.72 3.74
81 82 6.259608 TCATCTAGCTGCTGAAATTAAAGCTC 59.740 38.462 13.43 5.77 42.98 4.09
82 83 5.491070 TCTAGCTGCTGAAATTAAAGCTCA 58.509 37.500 13.43 0.00 42.98 4.26
83 84 6.118170 TCTAGCTGCTGAAATTAAAGCTCAT 58.882 36.000 13.43 2.88 42.98 2.90
84 85 5.656213 AGCTGCTGAAATTAAAGCTCATT 57.344 34.783 0.00 0.00 40.06 2.57
85 86 6.034161 AGCTGCTGAAATTAAAGCTCATTT 57.966 33.333 0.00 0.00 40.06 2.32
86 87 5.867716 AGCTGCTGAAATTAAAGCTCATTTG 59.132 36.000 0.00 0.00 40.06 2.32
87 88 5.063060 GCTGCTGAAATTAAAGCTCATTTGG 59.937 40.000 12.14 0.00 40.21 3.28
88 89 6.100404 TGCTGAAATTAAAGCTCATTTGGT 57.900 33.333 12.14 0.00 40.21 3.67
89 90 7.225784 TGCTGAAATTAAAGCTCATTTGGTA 57.774 32.000 12.14 0.00 40.21 3.25
90 91 7.315142 TGCTGAAATTAAAGCTCATTTGGTAG 58.685 34.615 12.14 2.26 40.21 3.18
91 92 7.039784 TGCTGAAATTAAAGCTCATTTGGTAGT 60.040 33.333 12.14 0.00 40.21 2.73
92 93 7.814587 GCTGAAATTAAAGCTCATTTGGTAGTT 59.185 33.333 5.29 0.00 36.47 2.24
95 96 9.788960 GAAATTAAAGCTCATTTGGTAGTTAGG 57.211 33.333 3.80 0.00 32.01 2.69
96 97 9.528489 AAATTAAAGCTCATTTGGTAGTTAGGA 57.472 29.630 0.00 0.00 32.01 2.94
97 98 9.528489 AATTAAAGCTCATTTGGTAGTTAGGAA 57.472 29.630 0.00 0.00 32.01 3.36
98 99 8.561738 TTAAAGCTCATTTGGTAGTTAGGAAG 57.438 34.615 0.00 0.00 32.01 3.46
99 100 5.763876 AGCTCATTTGGTAGTTAGGAAGT 57.236 39.130 0.00 0.00 0.00 3.01
100 101 6.128138 AGCTCATTTGGTAGTTAGGAAGTT 57.872 37.500 0.00 0.00 0.00 2.66
101 102 6.543735 AGCTCATTTGGTAGTTAGGAAGTTT 58.456 36.000 0.00 0.00 0.00 2.66
102 103 6.431234 AGCTCATTTGGTAGTTAGGAAGTTTG 59.569 38.462 0.00 0.00 0.00 2.93
103 104 6.206829 GCTCATTTGGTAGTTAGGAAGTTTGT 59.793 38.462 0.00 0.00 0.00 2.83
104 105 7.255486 GCTCATTTGGTAGTTAGGAAGTTTGTT 60.255 37.037 0.00 0.00 0.00 2.83
105 106 8.161699 TCATTTGGTAGTTAGGAAGTTTGTTC 57.838 34.615 0.00 0.00 0.00 3.18
106 107 6.947644 TTTGGTAGTTAGGAAGTTTGTTCC 57.052 37.500 0.00 0.00 38.86 3.62
108 109 5.861727 TGGTAGTTAGGAAGTTTGTTCCTC 58.138 41.667 9.59 0.00 45.32 3.71
109 110 5.605488 TGGTAGTTAGGAAGTTTGTTCCTCT 59.395 40.000 9.59 5.15 45.32 3.69
110 111 6.783977 TGGTAGTTAGGAAGTTTGTTCCTCTA 59.216 38.462 9.59 4.26 45.32 2.43
111 112 7.290714 TGGTAGTTAGGAAGTTTGTTCCTCTAA 59.709 37.037 9.59 0.00 45.32 2.10
112 113 8.152898 GGTAGTTAGGAAGTTTGTTCCTCTAAA 58.847 37.037 9.59 0.00 45.32 1.85
113 114 9.551734 GTAGTTAGGAAGTTTGTTCCTCTAAAA 57.448 33.333 9.59 0.00 45.32 1.52
114 115 8.678593 AGTTAGGAAGTTTGTTCCTCTAAAAG 57.321 34.615 9.59 0.00 45.32 2.27
115 116 8.272889 AGTTAGGAAGTTTGTTCCTCTAAAAGT 58.727 33.333 9.59 0.00 45.32 2.66
116 117 8.900781 GTTAGGAAGTTTGTTCCTCTAAAAGTT 58.099 33.333 9.59 0.00 45.32 2.66
118 119 8.678593 AGGAAGTTTGTTCCTCTAAAAGTTAG 57.321 34.615 0.17 0.00 45.32 2.34
119 120 7.228906 AGGAAGTTTGTTCCTCTAAAAGTTAGC 59.771 37.037 0.17 0.00 45.32 3.09
120 121 7.012989 GGAAGTTTGTTCCTCTAAAAGTTAGCA 59.987 37.037 0.00 0.00 35.73 3.49
121 122 7.497925 AGTTTGTTCCTCTAAAAGTTAGCAG 57.502 36.000 0.00 0.00 0.00 4.24
122 123 7.280356 AGTTTGTTCCTCTAAAAGTTAGCAGA 58.720 34.615 0.00 0.00 0.00 4.26
123 124 7.939588 AGTTTGTTCCTCTAAAAGTTAGCAGAT 59.060 33.333 0.00 0.00 0.00 2.90
124 125 9.216117 GTTTGTTCCTCTAAAAGTTAGCAGATA 57.784 33.333 0.00 0.00 0.00 1.98
125 126 9.959721 TTTGTTCCTCTAAAAGTTAGCAGATAT 57.040 29.630 0.00 0.00 0.00 1.63
126 127 9.601217 TTGTTCCTCTAAAAGTTAGCAGATATC 57.399 33.333 0.00 0.00 0.00 1.63
127 128 8.758829 TGTTCCTCTAAAAGTTAGCAGATATCA 58.241 33.333 5.32 0.00 0.00 2.15
128 129 9.601217 GTTCCTCTAAAAGTTAGCAGATATCAA 57.399 33.333 5.32 0.00 0.00 2.57
136 137 9.700831 AAAAGTTAGCAGATATCAAAATAGGGT 57.299 29.630 5.32 0.00 0.00 4.34
139 140 8.097662 AGTTAGCAGATATCAAAATAGGGTAGC 58.902 37.037 5.32 0.00 0.00 3.58
140 141 6.439636 AGCAGATATCAAAATAGGGTAGCA 57.560 37.500 5.32 0.00 0.00 3.49
141 142 6.234177 AGCAGATATCAAAATAGGGTAGCAC 58.766 40.000 5.32 0.00 0.00 4.40
142 143 5.997746 GCAGATATCAAAATAGGGTAGCACA 59.002 40.000 5.32 0.00 0.00 4.57
143 144 6.656693 GCAGATATCAAAATAGGGTAGCACAT 59.343 38.462 5.32 0.00 0.00 3.21
144 145 7.148340 GCAGATATCAAAATAGGGTAGCACATC 60.148 40.741 5.32 0.00 0.00 3.06
145 146 7.879677 CAGATATCAAAATAGGGTAGCACATCA 59.120 37.037 5.32 0.00 0.00 3.07
146 147 8.439971 AGATATCAAAATAGGGTAGCACATCAA 58.560 33.333 5.32 0.00 0.00 2.57
147 148 9.236006 GATATCAAAATAGGGTAGCACATCAAT 57.764 33.333 0.00 0.00 0.00 2.57
148 149 7.902920 ATCAAAATAGGGTAGCACATCAATT 57.097 32.000 0.00 0.00 0.00 2.32
149 150 7.099266 TCAAAATAGGGTAGCACATCAATTG 57.901 36.000 0.00 0.00 0.00 2.32
150 151 6.096705 TCAAAATAGGGTAGCACATCAATTGG 59.903 38.462 5.42 0.00 0.00 3.16
151 152 1.767759 AGGGTAGCACATCAATTGGC 58.232 50.000 5.42 0.64 0.00 4.52
152 153 1.005805 AGGGTAGCACATCAATTGGCA 59.994 47.619 5.42 0.00 0.00 4.92
153 154 1.134946 GGGTAGCACATCAATTGGCAC 59.865 52.381 5.42 2.79 0.00 5.01
154 155 1.818060 GGTAGCACATCAATTGGCACA 59.182 47.619 5.42 0.00 0.00 4.57
155 156 2.415893 GGTAGCACATCAATTGGCACAC 60.416 50.000 5.42 3.62 39.29 3.82
156 157 1.624336 AGCACATCAATTGGCACACT 58.376 45.000 5.42 0.00 39.29 3.55
157 158 2.794103 AGCACATCAATTGGCACACTA 58.206 42.857 5.42 0.00 39.29 2.74
158 159 3.359033 AGCACATCAATTGGCACACTAT 58.641 40.909 5.42 0.00 39.29 2.12
159 160 4.525996 AGCACATCAATTGGCACACTATA 58.474 39.130 5.42 0.00 39.29 1.31
160 161 4.577693 AGCACATCAATTGGCACACTATAG 59.422 41.667 5.42 0.00 39.29 1.31
161 162 4.790766 GCACATCAATTGGCACACTATAGC 60.791 45.833 5.42 0.00 39.29 2.97
168 169 2.135664 GGCACACTATAGCCGTACTG 57.864 55.000 0.00 0.00 41.70 2.74
169 170 1.679680 GGCACACTATAGCCGTACTGA 59.320 52.381 0.00 0.00 41.70 3.41
170 171 2.100252 GGCACACTATAGCCGTACTGAA 59.900 50.000 0.00 0.00 41.70 3.02
171 172 3.372954 GCACACTATAGCCGTACTGAAG 58.627 50.000 0.00 0.00 0.00 3.02
172 173 3.372954 CACACTATAGCCGTACTGAAGC 58.627 50.000 0.00 0.00 0.00 3.86
173 174 3.066900 CACACTATAGCCGTACTGAAGCT 59.933 47.826 0.00 0.00 40.66 3.74
174 175 3.700038 ACACTATAGCCGTACTGAAGCTT 59.300 43.478 0.00 0.00 38.06 3.74
175 176 4.045104 CACTATAGCCGTACTGAAGCTTG 58.955 47.826 2.10 0.00 38.06 4.01
176 177 3.700038 ACTATAGCCGTACTGAAGCTTGT 59.300 43.478 2.10 0.00 38.06 3.16
177 178 4.885907 ACTATAGCCGTACTGAAGCTTGTA 59.114 41.667 2.10 0.00 38.06 2.41
178 179 2.365408 AGCCGTACTGAAGCTTGTAC 57.635 50.000 2.10 10.33 36.59 2.90
179 180 1.893801 AGCCGTACTGAAGCTTGTACT 59.106 47.619 19.28 4.34 37.47 2.73
180 181 1.993370 GCCGTACTGAAGCTTGTACTG 59.007 52.381 19.28 15.51 37.47 2.74
181 182 1.993370 CCGTACTGAAGCTTGTACTGC 59.007 52.381 19.28 0.00 37.47 4.40
182 183 1.649171 CGTACTGAAGCTTGTACTGCG 59.351 52.381 19.28 7.80 37.47 5.18
183 184 1.993370 GTACTGAAGCTTGTACTGCGG 59.007 52.381 16.12 4.32 36.89 5.69
184 185 0.393077 ACTGAAGCTTGTACTGCGGT 59.607 50.000 2.10 2.42 35.28 5.68
185 186 1.616865 ACTGAAGCTTGTACTGCGGTA 59.383 47.619 2.10 0.00 32.64 4.02
186 187 2.233922 ACTGAAGCTTGTACTGCGGTAT 59.766 45.455 9.01 0.00 32.64 2.73
187 188 2.604914 CTGAAGCTTGTACTGCGGTATG 59.395 50.000 9.01 4.01 35.28 2.39
188 189 1.933853 GAAGCTTGTACTGCGGTATGG 59.066 52.381 9.01 3.67 35.28 2.74
189 190 0.902531 AGCTTGTACTGCGGTATGGT 59.097 50.000 9.01 5.54 35.28 3.55
190 191 1.278127 AGCTTGTACTGCGGTATGGTT 59.722 47.619 9.01 0.00 35.28 3.67
191 192 1.396996 GCTTGTACTGCGGTATGGTTG 59.603 52.381 9.01 0.00 0.00 3.77
192 193 2.933492 GCTTGTACTGCGGTATGGTTGA 60.933 50.000 9.01 0.00 0.00 3.18
193 194 3.331150 CTTGTACTGCGGTATGGTTGAA 58.669 45.455 9.01 0.00 0.00 2.69
194 195 2.690786 TGTACTGCGGTATGGTTGAAC 58.309 47.619 9.01 0.00 0.00 3.18
195 196 2.300723 TGTACTGCGGTATGGTTGAACT 59.699 45.455 9.01 0.00 0.00 3.01
196 197 2.094762 ACTGCGGTATGGTTGAACTC 57.905 50.000 0.00 0.00 0.00 3.01
197 198 0.999406 CTGCGGTATGGTTGAACTCG 59.001 55.000 0.00 0.00 0.00 4.18
198 199 0.604073 TGCGGTATGGTTGAACTCGA 59.396 50.000 0.00 0.00 0.00 4.04
199 200 1.206132 TGCGGTATGGTTGAACTCGAT 59.794 47.619 0.00 0.00 0.00 3.59
200 201 2.277084 GCGGTATGGTTGAACTCGATT 58.723 47.619 0.00 0.00 0.00 3.34
201 202 2.284417 GCGGTATGGTTGAACTCGATTC 59.716 50.000 0.00 0.00 37.88 2.52
202 203 2.864343 CGGTATGGTTGAACTCGATTCC 59.136 50.000 0.00 0.00 36.36 3.01
203 204 3.430374 CGGTATGGTTGAACTCGATTCCT 60.430 47.826 0.00 0.00 36.36 3.36
204 205 4.120589 GGTATGGTTGAACTCGATTCCTC 58.879 47.826 0.00 0.00 36.36 3.71
205 206 2.762535 TGGTTGAACTCGATTCCTCC 57.237 50.000 0.00 0.00 36.36 4.30
206 207 1.067142 TGGTTGAACTCGATTCCTCCG 60.067 52.381 0.00 0.00 36.36 4.63
207 208 1.067071 GGTTGAACTCGATTCCTCCGT 60.067 52.381 0.00 0.00 36.36 4.69
208 209 1.993370 GTTGAACTCGATTCCTCCGTG 59.007 52.381 0.00 0.00 36.36 4.94
209 210 0.530744 TGAACTCGATTCCTCCGTGG 59.469 55.000 0.00 0.00 36.36 4.94
210 211 0.531200 GAACTCGATTCCTCCGTGGT 59.469 55.000 0.00 0.00 37.07 4.16
211 212 0.246635 AACTCGATTCCTCCGTGGTG 59.753 55.000 0.00 0.00 37.07 4.17
212 213 0.898789 ACTCGATTCCTCCGTGGTGT 60.899 55.000 0.00 0.00 37.07 4.16
213 214 0.458543 CTCGATTCCTCCGTGGTGTG 60.459 60.000 0.00 0.00 37.07 3.82
214 215 0.896479 TCGATTCCTCCGTGGTGTGA 60.896 55.000 0.00 0.00 37.07 3.58
215 216 0.458543 CGATTCCTCCGTGGTGTGAG 60.459 60.000 0.00 0.00 37.07 3.51
220 221 3.935993 CTCCGTGGTGTGAGGAATT 57.064 52.632 0.00 0.00 33.10 2.17
221 222 1.442769 CTCCGTGGTGTGAGGAATTG 58.557 55.000 0.00 0.00 33.10 2.32
222 223 0.036164 TCCGTGGTGTGAGGAATTGG 59.964 55.000 0.00 0.00 0.00 3.16
223 224 0.250727 CCGTGGTGTGAGGAATTGGT 60.251 55.000 0.00 0.00 0.00 3.67
224 225 0.874390 CGTGGTGTGAGGAATTGGTG 59.126 55.000 0.00 0.00 0.00 4.17
225 226 1.813862 CGTGGTGTGAGGAATTGGTGT 60.814 52.381 0.00 0.00 0.00 4.16
226 227 1.880027 GTGGTGTGAGGAATTGGTGTC 59.120 52.381 0.00 0.00 0.00 3.67
227 228 1.774254 TGGTGTGAGGAATTGGTGTCT 59.226 47.619 0.00 0.00 0.00 3.41
228 229 2.224523 TGGTGTGAGGAATTGGTGTCTC 60.225 50.000 0.00 0.00 0.00 3.36
229 230 2.069273 GTGTGAGGAATTGGTGTCTCG 58.931 52.381 0.00 0.00 0.00 4.04
230 231 1.691976 TGTGAGGAATTGGTGTCTCGT 59.308 47.619 0.00 0.00 0.00 4.18
231 232 2.069273 GTGAGGAATTGGTGTCTCGTG 58.931 52.381 0.00 0.00 0.00 4.35
232 233 1.967779 TGAGGAATTGGTGTCTCGTGA 59.032 47.619 0.00 0.00 0.00 4.35
233 234 2.567169 TGAGGAATTGGTGTCTCGTGAT 59.433 45.455 0.00 0.00 0.00 3.06
234 235 3.007940 TGAGGAATTGGTGTCTCGTGATT 59.992 43.478 0.00 0.00 0.00 2.57
235 236 3.338249 AGGAATTGGTGTCTCGTGATTG 58.662 45.455 0.00 0.00 0.00 2.67
236 237 3.074412 GGAATTGGTGTCTCGTGATTGT 58.926 45.455 0.00 0.00 0.00 2.71
237 238 4.020573 AGGAATTGGTGTCTCGTGATTGTA 60.021 41.667 0.00 0.00 0.00 2.41
238 239 4.693566 GGAATTGGTGTCTCGTGATTGTAA 59.306 41.667 0.00 0.00 0.00 2.41
239 240 5.390567 GGAATTGGTGTCTCGTGATTGTAAC 60.391 44.000 0.00 0.00 0.00 2.50
240 241 3.034721 TGGTGTCTCGTGATTGTAACC 57.965 47.619 0.00 0.00 0.00 2.85
241 242 2.289195 TGGTGTCTCGTGATTGTAACCC 60.289 50.000 0.00 0.00 0.00 4.11
242 243 2.028385 GGTGTCTCGTGATTGTAACCCT 60.028 50.000 0.00 0.00 0.00 4.34
243 244 3.251571 GTGTCTCGTGATTGTAACCCTC 58.748 50.000 0.00 0.00 0.00 4.30
244 245 3.056749 GTGTCTCGTGATTGTAACCCTCT 60.057 47.826 0.00 0.00 0.00 3.69
245 246 3.192844 TGTCTCGTGATTGTAACCCTCTC 59.807 47.826 0.00 0.00 0.00 3.20
246 247 3.192844 GTCTCGTGATTGTAACCCTCTCA 59.807 47.826 0.00 0.00 0.00 3.27
247 248 4.023980 TCTCGTGATTGTAACCCTCTCAT 58.976 43.478 0.00 0.00 0.00 2.90
248 249 4.466370 TCTCGTGATTGTAACCCTCTCATT 59.534 41.667 0.00 0.00 0.00 2.57
249 250 4.503910 TCGTGATTGTAACCCTCTCATTG 58.496 43.478 0.00 0.00 0.00 2.82
250 251 4.020573 TCGTGATTGTAACCCTCTCATTGT 60.021 41.667 0.00 0.00 0.00 2.71
251 252 4.093408 CGTGATTGTAACCCTCTCATTGTG 59.907 45.833 0.00 0.00 0.00 3.33
252 253 4.396166 GTGATTGTAACCCTCTCATTGTGG 59.604 45.833 0.00 0.00 0.00 4.17
253 254 4.288366 TGATTGTAACCCTCTCATTGTGGA 59.712 41.667 0.00 0.00 0.00 4.02
254 255 4.715534 TTGTAACCCTCTCATTGTGGAA 57.284 40.909 0.00 0.00 0.00 3.53
255 256 4.927267 TGTAACCCTCTCATTGTGGAAT 57.073 40.909 0.00 0.00 0.00 3.01
256 257 6.381498 TTGTAACCCTCTCATTGTGGAATA 57.619 37.500 0.00 0.00 0.00 1.75
257 258 6.381498 TGTAACCCTCTCATTGTGGAATAA 57.619 37.500 0.00 0.00 0.00 1.40
258 259 6.785076 TGTAACCCTCTCATTGTGGAATAAA 58.215 36.000 0.00 0.00 0.00 1.40
259 260 7.235079 TGTAACCCTCTCATTGTGGAATAAAA 58.765 34.615 0.00 0.00 0.00 1.52
260 261 6.590234 AACCCTCTCATTGTGGAATAAAAC 57.410 37.500 0.00 0.00 0.00 2.43
261 262 5.640147 ACCCTCTCATTGTGGAATAAAACA 58.360 37.500 0.00 0.00 0.00 2.83
262 263 6.256053 ACCCTCTCATTGTGGAATAAAACAT 58.744 36.000 0.00 0.00 0.00 2.71
263 264 6.378280 ACCCTCTCATTGTGGAATAAAACATC 59.622 38.462 0.00 0.00 0.00 3.06
264 265 6.183360 CCCTCTCATTGTGGAATAAAACATCC 60.183 42.308 0.00 0.00 36.21 3.51
265 266 6.604795 CCTCTCATTGTGGAATAAAACATCCT 59.395 38.462 0.00 0.00 36.64 3.24
266 267 7.123247 CCTCTCATTGTGGAATAAAACATCCTT 59.877 37.037 0.00 0.00 36.64 3.36
267 268 8.421249 TCTCATTGTGGAATAAAACATCCTTT 57.579 30.769 0.00 0.00 36.64 3.11
268 269 8.522830 TCTCATTGTGGAATAAAACATCCTTTC 58.477 33.333 0.00 0.00 36.64 2.62
269 270 8.421249 TCATTGTGGAATAAAACATCCTTTCT 57.579 30.769 0.00 0.00 36.64 2.52
270 271 8.522830 TCATTGTGGAATAAAACATCCTTTCTC 58.477 33.333 0.00 0.00 36.64 2.87
271 272 6.834168 TGTGGAATAAAACATCCTTTCTCC 57.166 37.500 0.00 0.00 36.64 3.71
272 273 5.714806 TGTGGAATAAAACATCCTTTCTCCC 59.285 40.000 0.00 0.00 36.64 4.30
273 274 5.127194 GTGGAATAAAACATCCTTTCTCCCC 59.873 44.000 0.00 0.00 36.64 4.81
274 275 4.338400 GGAATAAAACATCCTTTCTCCCCG 59.662 45.833 0.00 0.00 32.75 5.73
275 276 1.545841 AAAACATCCTTTCTCCCCGC 58.454 50.000 0.00 0.00 0.00 6.13
276 277 0.404040 AAACATCCTTTCTCCCCGCA 59.596 50.000 0.00 0.00 0.00 5.69
277 278 0.404040 AACATCCTTTCTCCCCGCAA 59.596 50.000 0.00 0.00 0.00 4.85
278 279 0.404040 ACATCCTTTCTCCCCGCAAA 59.596 50.000 0.00 0.00 0.00 3.68
279 280 1.203001 ACATCCTTTCTCCCCGCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
280 281 1.892474 CATCCTTTCTCCCCGCAAAAA 59.108 47.619 0.00 0.00 0.00 1.94
402 406 5.600908 TTACCAAAGTTCTAATGCACGTC 57.399 39.130 0.00 0.00 0.00 4.34
420 424 3.498397 ACGTCTTTTGTGAAGCCATACAG 59.502 43.478 0.00 0.00 0.00 2.74
422 426 4.143030 CGTCTTTTGTGAAGCCATACAGAG 60.143 45.833 0.00 0.00 0.00 3.35
491 495 3.505464 AAAGTACCGATTGACCTCTCG 57.495 47.619 0.00 0.00 34.73 4.04
499 503 0.537188 ATTGACCTCTCGCCAATCGT 59.463 50.000 0.00 0.00 39.67 3.73
703 756 2.151202 TGGTCGATTTCTTCTGTTGGC 58.849 47.619 0.00 0.00 0.00 4.52
733 786 3.420893 CCTAACCTGCTTGGATTGTTCA 58.579 45.455 3.40 0.00 39.71 3.18
734 787 4.019174 CCTAACCTGCTTGGATTGTTCAT 58.981 43.478 3.40 0.00 39.71 2.57
735 788 4.463891 CCTAACCTGCTTGGATTGTTCATT 59.536 41.667 3.40 0.00 39.71 2.57
736 789 4.961438 AACCTGCTTGGATTGTTCATTT 57.039 36.364 3.40 0.00 39.71 2.32
737 790 4.961438 ACCTGCTTGGATTGTTCATTTT 57.039 36.364 3.40 0.00 39.71 1.82
738 791 5.294734 ACCTGCTTGGATTGTTCATTTTT 57.705 34.783 3.40 0.00 39.71 1.94
795 853 0.949397 TTCCGGGACTGATATCGACG 59.051 55.000 0.00 0.00 0.00 5.12
899 958 1.681264 CAACAGTTCAACAGAACCCCC 59.319 52.381 4.86 0.00 42.01 5.40
976 1035 1.823295 GGCATCGTAGAGCCCTTCA 59.177 57.895 0.00 0.00 43.63 3.02
1131 1204 0.605319 TGCAGGTTTCCGATGGTGTC 60.605 55.000 0.00 0.00 0.00 3.67
1132 1205 0.605319 GCAGGTTTCCGATGGTGTCA 60.605 55.000 0.00 0.00 0.00 3.58
1167 1240 1.867233 GCTCGCAATGGTAATCACGAT 59.133 47.619 0.00 0.00 0.00 3.73
1334 1409 8.982685 AGAATATGTCTAAGCATGTATTTCGTG 58.017 33.333 0.00 0.00 33.56 4.35
1335 1410 8.662781 AATATGTCTAAGCATGTATTTCGTGT 57.337 30.769 0.00 0.00 35.64 4.49
1336 1411 6.985188 ATGTCTAAGCATGTATTTCGTGTT 57.015 33.333 0.00 0.00 35.64 3.32
1337 1412 6.795098 TGTCTAAGCATGTATTTCGTGTTT 57.205 33.333 0.00 0.00 39.26 2.83
1338 1413 6.598525 TGTCTAAGCATGTATTTCGTGTTTG 58.401 36.000 0.00 0.00 37.16 2.93
1379 1454 3.948473 CTCTCTCCATCAGTTCGGACTTA 59.052 47.826 0.00 0.00 32.54 2.24
1433 1508 5.494724 AGTGTCATGCTGTGTATCAAATCT 58.505 37.500 0.00 0.00 0.00 2.40
1457 1532 6.497624 AGAGACATGGATCTTAGAAATGCT 57.502 37.500 0.00 0.00 0.00 3.79
1472 1547 8.540507 TTAGAAATGCTACTGGACTTAGAGAT 57.459 34.615 0.00 0.00 0.00 2.75
1537 1612 3.976169 TGTGAAAACACAGCCAATAAGC 58.024 40.909 0.00 0.00 0.00 3.09
1567 1642 7.331026 TCTGTAATCTGCTAGCACATACTTTT 58.669 34.615 14.93 0.00 0.00 2.27
1732 1809 4.824537 TGCTCCTTGTGCAAAGTACAAATA 59.175 37.500 0.00 0.00 37.56 1.40
1842 1920 1.477700 TGCATTTAGCTTGACATGGCC 59.522 47.619 0.00 0.00 45.94 5.36
1855 1933 1.269012 CATGGCCCACTCACCAATTT 58.731 50.000 0.00 0.00 39.96 1.82
1950 2028 7.063544 AGCTCATTTAATGAACAAGTACGAGTC 59.936 37.037 9.05 0.00 39.11 3.36
1951 2029 7.063544 GCTCATTTAATGAACAAGTACGAGTCT 59.936 37.037 9.05 0.00 39.11 3.24
1952 2030 8.462143 TCATTTAATGAACAAGTACGAGTCTC 57.538 34.615 5.03 0.00 36.11 3.36
1953 2031 8.304596 TCATTTAATGAACAAGTACGAGTCTCT 58.695 33.333 5.03 0.00 36.11 3.10
1954 2032 8.587950 CATTTAATGAACAAGTACGAGTCTCTC 58.412 37.037 0.00 0.00 0.00 3.20
1955 2033 5.707242 AATGAACAAGTACGAGTCTCTCA 57.293 39.130 0.00 0.00 0.00 3.27
1956 2034 4.485024 TGAACAAGTACGAGTCTCTCAC 57.515 45.455 0.00 0.00 0.00 3.51
1957 2035 3.881089 TGAACAAGTACGAGTCTCTCACA 59.119 43.478 0.00 0.00 0.00 3.58
1958 2036 4.519350 TGAACAAGTACGAGTCTCTCACAT 59.481 41.667 0.00 0.00 0.00 3.21
1959 2037 5.704053 TGAACAAGTACGAGTCTCTCACATA 59.296 40.000 0.00 0.00 0.00 2.29
1960 2038 6.374613 TGAACAAGTACGAGTCTCTCACATAT 59.625 38.462 0.00 0.00 0.00 1.78
1961 2039 6.366315 ACAAGTACGAGTCTCTCACATATC 57.634 41.667 0.00 0.00 0.00 1.63
1962 2040 6.116806 ACAAGTACGAGTCTCTCACATATCT 58.883 40.000 0.00 0.00 0.00 1.98
1963 2041 6.259167 ACAAGTACGAGTCTCTCACATATCTC 59.741 42.308 0.00 0.00 0.00 2.75
1964 2042 6.169557 AGTACGAGTCTCTCACATATCTCT 57.830 41.667 0.00 0.00 0.00 3.10
1965 2043 6.588204 AGTACGAGTCTCTCACATATCTCTT 58.412 40.000 0.00 0.00 0.00 2.85
1966 2044 5.749596 ACGAGTCTCTCACATATCTCTTG 57.250 43.478 0.00 0.00 0.00 3.02
1972 2050 9.230122 GAGTCTCTCACATATCTCTTGATATCA 57.770 37.037 0.00 0.00 42.26 2.15
2396 2484 1.864565 TATCATGGGACGAACATGCG 58.135 50.000 11.81 0.00 44.07 4.73
2515 2604 1.823610 GGTACTAGCGACCTGGAGTTT 59.176 52.381 0.00 0.00 33.86 2.66
2533 2625 8.718102 TGGAGTTTTACTTCTTATAGTGATGC 57.282 34.615 0.00 0.00 0.00 3.91
2554 2646 7.826744 TGATGCATAAGTATGACTTGGTTTGTA 59.173 33.333 0.00 0.00 39.11 2.41
2584 2676 4.953940 TCCTATTTTGTGCAGCCTTTTT 57.046 36.364 0.00 0.00 0.00 1.94
2648 2740 3.508744 ACTCAACTTTGGTGCAACTTG 57.491 42.857 2.04 0.00 36.74 3.16
2674 2766 1.886542 CAGGGGAACAAAAGTACTGGC 59.113 52.381 0.00 0.00 0.00 4.85
2879 2971 5.764192 ACTGTTGCCATATTTTTGCATTGTT 59.236 32.000 0.00 0.00 34.51 2.83
2892 2984 6.469139 TTTGCATTGTTAATGTGCTGATTG 57.531 33.333 9.91 0.00 41.01 2.67
3045 3137 6.265649 TGAGCTACAATCAGGGTAAGAGATAC 59.734 42.308 0.00 0.00 0.00 2.24
3046 3138 6.136857 AGCTACAATCAGGGTAAGAGATACA 58.863 40.000 0.00 0.00 36.14 2.29
3101 3193 3.119531 TGATGTAATTTCTGGCCAAAGCG 60.120 43.478 7.01 0.00 41.24 4.68
3325 3419 0.865111 TTGTCTCCACGCATTTGTCG 59.135 50.000 0.00 0.00 0.00 4.35
3348 3442 9.274065 GTCGTATTGATGAAACCAAATAAAGAC 57.726 33.333 0.00 0.00 0.00 3.01
3451 3546 1.447938 GCTGCGTTTGATTTCACAACG 59.552 47.619 16.50 16.50 40.16 4.10
3497 3593 2.672961 TCATGGTTCTACGGAGCAAG 57.327 50.000 0.00 0.00 0.00 4.01
3516 3612 7.121315 GGAGCAAGTAAGTATCTTTGGTGATTT 59.879 37.037 0.00 0.00 0.00 2.17
3743 3839 3.390639 TGCTTGGAATTGTTCATTGGGTT 59.609 39.130 0.00 0.00 0.00 4.11
3754 3850 7.716799 TTGTTCATTGGGTTCTATTAAGCAT 57.283 32.000 0.00 0.00 0.00 3.79
3839 3935 3.119029 GGTATGGCATCAGTTGTTTGCAT 60.119 43.478 1.65 0.00 38.12 3.96
3862 3959 9.555727 GCATTACTTATCCATAGACTGGTTTTA 57.444 33.333 0.00 0.00 46.08 1.52
3964 4062 5.741388 ATGATCGTAGGCATCAAAAAGTC 57.259 39.130 0.00 0.00 33.94 3.01
3993 4091 7.017645 CGTCACATTAAGAATTTCAAGACAGG 58.982 38.462 0.00 0.00 0.00 4.00
3998 4096 8.883731 ACATTAAGAATTTCAAGACAGGTATCG 58.116 33.333 0.00 0.00 0.00 2.92
4022 4120 9.256477 TCGTCAATAAGGATCACATGTTTATAC 57.744 33.333 0.00 0.00 0.00 1.47
4023 4121 9.261180 CGTCAATAAGGATCACATGTTTATACT 57.739 33.333 0.00 0.00 0.00 2.12
4278 4377 9.810545 GTCTTTCAGGGATATGCTTATATACTC 57.189 37.037 0.00 0.00 0.00 2.59
4368 4467 7.759489 TGAAATAGCAAAACTGGTATTCTGT 57.241 32.000 9.33 0.00 40.32 3.41
4525 4625 1.929836 GCTCAAATCTGTACTCGGCAG 59.070 52.381 0.00 0.00 35.43 4.85
5036 5154 6.680872 GCTTGATTATATAGTACTCCCTCCGC 60.681 46.154 0.00 0.00 0.00 5.54
5039 5157 1.453633 TATAGTACTCCCTCCGCCCT 58.546 55.000 0.00 0.00 0.00 5.19
5051 5169 3.056035 CCCTCCGCCCTACAATATAAGAC 60.056 52.174 0.00 0.00 0.00 3.01
5057 5399 5.295045 CCGCCCTACAATATAAGACGTTTTT 59.705 40.000 0.00 0.00 0.00 1.94
5058 5400 6.189567 CGCCCTACAATATAAGACGTTTTTG 58.810 40.000 0.00 0.00 0.00 2.44
5060 5402 7.010367 CGCCCTACAATATAAGACGTTTTTGTA 59.990 37.037 0.00 0.00 0.00 2.41
5063 5405 9.698617 CCTACAATATAAGACGTTTTTGTAAGC 57.301 33.333 0.00 0.00 31.40 3.09
5071 5413 5.912528 AGACGTTTTTGTAAGCTATGTTCG 58.087 37.500 0.00 0.00 0.00 3.95
5076 5418 7.485595 ACGTTTTTGTAAGCTATGTTCGTTTTT 59.514 29.630 0.00 0.00 0.00 1.94
5077 5419 7.781156 CGTTTTTGTAAGCTATGTTCGTTTTTG 59.219 33.333 0.00 0.00 0.00 2.44
5078 5420 8.588789 GTTTTTGTAAGCTATGTTCGTTTTTGT 58.411 29.630 0.00 0.00 0.00 2.83
5080 5422 9.784680 TTTTGTAAGCTATGTTCGTTTTTGTAA 57.215 25.926 0.00 0.00 0.00 2.41
5081 5423 8.996988 TTGTAAGCTATGTTCGTTTTTGTAAG 57.003 30.769 0.00 0.00 0.00 2.34
5082 5424 7.073265 TGTAAGCTATGTTCGTTTTTGTAAGC 58.927 34.615 0.00 0.00 0.00 3.09
5084 5426 7.429636 AAGCTATGTTCGTTTTTGTAAGCTA 57.570 32.000 0.00 0.00 36.82 3.32
5156 5656 8.942338 AAAGAAGTTTCATGTTTTAGTTTCCC 57.058 30.769 0.00 0.00 0.00 3.97
5158 5658 5.801531 AGTTTCATGTTTTAGTTTCCCCC 57.198 39.130 0.00 0.00 0.00 5.40
5159 5659 5.212745 AGTTTCATGTTTTAGTTTCCCCCA 58.787 37.500 0.00 0.00 0.00 4.96
5189 5689 3.328382 TTCGTGGAAAGTGTATCTGGG 57.672 47.619 0.00 0.00 0.00 4.45
5242 5742 2.694628 TCTCACAGCATTTTGCCTGTTT 59.305 40.909 0.00 0.00 46.52 2.83
5243 5743 2.798283 CTCACAGCATTTTGCCTGTTTG 59.202 45.455 0.00 0.00 46.52 2.93
5244 5744 1.262151 CACAGCATTTTGCCTGTTTGC 59.738 47.619 0.00 0.00 46.52 3.68
5245 5745 1.134461 ACAGCATTTTGCCTGTTTGCA 60.134 42.857 0.00 0.00 46.52 4.08
5246 5746 2.147958 CAGCATTTTGCCTGTTTGCAT 58.852 42.857 0.00 0.00 46.52 3.96
5247 5747 2.158841 CAGCATTTTGCCTGTTTGCATC 59.841 45.455 0.00 0.00 46.52 3.91
5248 5748 1.127213 GCATTTTGCCTGTTTGCATCG 59.873 47.619 0.00 0.00 41.70 3.84
5261 5761 0.240678 TGCATCGTGGCAATGTTGAC 59.759 50.000 0.00 0.00 41.65 3.18
5267 5767 2.550606 TCGTGGCAATGTTGACTTAACC 59.449 45.455 0.00 0.00 38.55 2.85
5358 5858 2.241160 TGCACACGACTCCCTTAGTTA 58.759 47.619 0.00 0.00 39.07 2.24
5435 5961 0.393537 GGTGTTGGAGAGAGGGCATG 60.394 60.000 0.00 0.00 0.00 4.06
5569 6106 4.035102 GCCGGCTCTTCACCCCTT 62.035 66.667 22.15 0.00 0.00 3.95
5580 6117 1.057851 TCACCCCTTCCAGTTCCGTT 61.058 55.000 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.519771 ATGGCCAGAGCATTTGAAGA 57.480 45.000 13.05 0.00 42.56 2.87
1 2 2.758979 AGAATGGCCAGAGCATTTGAAG 59.241 45.455 13.05 0.00 42.56 3.02
2 3 2.756760 GAGAATGGCCAGAGCATTTGAA 59.243 45.455 13.05 0.00 42.56 2.69
3 4 2.025605 AGAGAATGGCCAGAGCATTTGA 60.026 45.455 13.05 0.00 42.56 2.69
4 5 2.358267 GAGAGAATGGCCAGAGCATTTG 59.642 50.000 13.05 0.00 42.56 2.32
5 6 2.652590 GAGAGAATGGCCAGAGCATTT 58.347 47.619 13.05 0.00 42.56 2.32
6 7 1.474677 CGAGAGAATGGCCAGAGCATT 60.475 52.381 13.05 0.00 42.56 3.56
7 8 0.106335 CGAGAGAATGGCCAGAGCAT 59.894 55.000 13.05 0.00 42.56 3.79
8 9 0.972471 TCGAGAGAATGGCCAGAGCA 60.972 55.000 13.05 0.00 37.87 4.26
9 10 0.249405 CTCGAGAGAATGGCCAGAGC 60.249 60.000 13.05 2.42 41.32 4.09
10 11 0.249405 GCTCGAGAGAATGGCCAGAG 60.249 60.000 18.75 11.63 41.32 3.35
11 12 1.819229 GCTCGAGAGAATGGCCAGA 59.181 57.895 18.75 0.00 41.32 3.86
12 13 1.591059 CGCTCGAGAGAATGGCCAG 60.591 63.158 18.75 0.00 41.32 4.85
13 14 2.052104 TCGCTCGAGAGAATGGCCA 61.052 57.895 18.75 8.56 41.32 5.36
14 15 1.590259 GTCGCTCGAGAGAATGGCC 60.590 63.158 20.85 4.21 41.32 5.36
15 16 0.458543 TTGTCGCTCGAGAGAATGGC 60.459 55.000 20.85 8.87 41.32 4.40
16 17 2.123342 GATTGTCGCTCGAGAGAATGG 58.877 52.381 20.85 0.00 41.32 3.16
17 18 3.077229 AGATTGTCGCTCGAGAGAATG 57.923 47.619 20.85 1.74 41.32 2.67
18 19 3.791973 AAGATTGTCGCTCGAGAGAAT 57.208 42.857 20.85 11.59 41.32 2.40
19 20 3.577649 AAAGATTGTCGCTCGAGAGAA 57.422 42.857 20.85 6.73 41.32 2.87
20 21 3.057526 TGAAAAGATTGTCGCTCGAGAGA 60.058 43.478 18.75 16.94 39.12 3.10
21 22 3.245797 TGAAAAGATTGTCGCTCGAGAG 58.754 45.455 18.75 14.32 0.00 3.20
22 23 3.245797 CTGAAAAGATTGTCGCTCGAGA 58.754 45.455 18.75 0.00 0.00 4.04
23 24 2.346847 CCTGAAAAGATTGTCGCTCGAG 59.653 50.000 8.45 8.45 0.00 4.04
24 25 2.288825 ACCTGAAAAGATTGTCGCTCGA 60.289 45.455 0.00 0.00 0.00 4.04
25 26 2.069273 ACCTGAAAAGATTGTCGCTCG 58.931 47.619 0.00 0.00 0.00 5.03
26 27 2.092838 CGACCTGAAAAGATTGTCGCTC 59.907 50.000 0.00 0.00 41.71 5.03
27 28 2.069273 CGACCTGAAAAGATTGTCGCT 58.931 47.619 0.00 0.00 41.71 4.93
28 29 1.128692 CCGACCTGAAAAGATTGTCGC 59.871 52.381 4.94 0.00 45.37 5.19
29 30 1.128692 GCCGACCTGAAAAGATTGTCG 59.871 52.381 0.00 0.00 46.05 4.35
30 31 1.468914 GGCCGACCTGAAAAGATTGTC 59.531 52.381 0.00 0.00 0.00 3.18
31 32 1.534729 GGCCGACCTGAAAAGATTGT 58.465 50.000 0.00 0.00 0.00 2.71
43 44 1.546476 CTAGATGACCATAGGCCGACC 59.454 57.143 0.00 0.00 0.00 4.79
44 45 1.067495 GCTAGATGACCATAGGCCGAC 60.067 57.143 0.00 0.00 0.00 4.79
45 46 1.203063 AGCTAGATGACCATAGGCCGA 60.203 52.381 0.00 0.00 0.00 5.54
46 47 1.067283 CAGCTAGATGACCATAGGCCG 60.067 57.143 0.40 0.00 0.00 6.13
47 48 1.338579 GCAGCTAGATGACCATAGGCC 60.339 57.143 13.26 0.00 0.00 5.19
48 49 1.622811 AGCAGCTAGATGACCATAGGC 59.377 52.381 13.26 0.00 0.00 3.93
49 50 2.896044 TCAGCAGCTAGATGACCATAGG 59.104 50.000 13.26 0.00 37.82 2.57
50 51 4.597404 TTCAGCAGCTAGATGACCATAG 57.403 45.455 13.26 0.00 43.42 2.23
51 52 5.557576 ATTTCAGCAGCTAGATGACCATA 57.442 39.130 13.26 0.00 43.42 2.74
52 53 3.920231 TTTCAGCAGCTAGATGACCAT 57.080 42.857 13.26 0.00 43.42 3.55
53 54 3.920231 ATTTCAGCAGCTAGATGACCA 57.080 42.857 13.26 0.00 43.42 4.02
54 55 6.683974 TTTAATTTCAGCAGCTAGATGACC 57.316 37.500 13.26 0.00 43.42 4.02
55 56 6.038050 AGCTTTAATTTCAGCAGCTAGATGAC 59.962 38.462 13.26 3.12 43.42 3.06
56 57 6.118170 AGCTTTAATTTCAGCAGCTAGATGA 58.882 36.000 13.26 0.00 41.72 2.92
57 58 6.037940 TGAGCTTTAATTTCAGCAGCTAGATG 59.962 38.462 2.90 2.90 40.97 2.90
58 59 6.118170 TGAGCTTTAATTTCAGCAGCTAGAT 58.882 36.000 0.00 0.00 40.97 1.98
59 60 5.491070 TGAGCTTTAATTTCAGCAGCTAGA 58.509 37.500 0.00 0.00 40.97 2.43
60 61 5.808042 TGAGCTTTAATTTCAGCAGCTAG 57.192 39.130 0.00 0.00 40.97 3.42
61 62 6.764308 AATGAGCTTTAATTTCAGCAGCTA 57.236 33.333 0.00 0.00 40.97 3.32
62 63 5.656213 AATGAGCTTTAATTTCAGCAGCT 57.344 34.783 10.32 0.00 43.62 4.24
63 64 5.063060 CCAAATGAGCTTTAATTTCAGCAGC 59.937 40.000 10.32 0.00 38.61 5.25
64 65 6.161381 ACCAAATGAGCTTTAATTTCAGCAG 58.839 36.000 10.32 0.00 38.61 4.24
65 66 6.100404 ACCAAATGAGCTTTAATTTCAGCA 57.900 33.333 10.32 0.00 38.61 4.41
66 67 7.315890 ACTACCAAATGAGCTTTAATTTCAGC 58.684 34.615 0.00 1.16 36.16 4.26
69 70 9.788960 CCTAACTACCAAATGAGCTTTAATTTC 57.211 33.333 0.00 0.00 0.00 2.17
70 71 9.528489 TCCTAACTACCAAATGAGCTTTAATTT 57.472 29.630 0.00 0.00 0.00 1.82
71 72 9.528489 TTCCTAACTACCAAATGAGCTTTAATT 57.472 29.630 0.00 0.00 0.00 1.40
72 73 9.178758 CTTCCTAACTACCAAATGAGCTTTAAT 57.821 33.333 0.00 0.00 0.00 1.40
73 74 8.161425 ACTTCCTAACTACCAAATGAGCTTTAA 58.839 33.333 0.00 0.00 0.00 1.52
74 75 7.686434 ACTTCCTAACTACCAAATGAGCTTTA 58.314 34.615 0.00 0.00 0.00 1.85
75 76 6.543735 ACTTCCTAACTACCAAATGAGCTTT 58.456 36.000 0.00 0.00 0.00 3.51
76 77 6.128138 ACTTCCTAACTACCAAATGAGCTT 57.872 37.500 0.00 0.00 0.00 3.74
77 78 5.763876 ACTTCCTAACTACCAAATGAGCT 57.236 39.130 0.00 0.00 0.00 4.09
78 79 6.206829 ACAAACTTCCTAACTACCAAATGAGC 59.793 38.462 0.00 0.00 0.00 4.26
79 80 7.745620 ACAAACTTCCTAACTACCAAATGAG 57.254 36.000 0.00 0.00 0.00 2.90
80 81 7.229907 GGAACAAACTTCCTAACTACCAAATGA 59.770 37.037 0.00 0.00 35.73 2.57
81 82 7.230712 AGGAACAAACTTCCTAACTACCAAATG 59.769 37.037 0.00 0.00 46.48 2.32
82 83 7.295340 AGGAACAAACTTCCTAACTACCAAAT 58.705 34.615 0.00 0.00 46.48 2.32
83 84 6.665695 AGGAACAAACTTCCTAACTACCAAA 58.334 36.000 0.00 0.00 46.48 3.28
84 85 6.256643 AGGAACAAACTTCCTAACTACCAA 57.743 37.500 0.00 0.00 46.48 3.67
85 86 5.899631 AGGAACAAACTTCCTAACTACCA 57.100 39.130 0.00 0.00 46.48 3.25
94 95 7.012989 TGCTAACTTTTAGAGGAACAAACTTCC 59.987 37.037 0.00 0.00 38.86 3.46
95 96 7.927048 TGCTAACTTTTAGAGGAACAAACTTC 58.073 34.615 0.00 0.00 0.00 3.01
96 97 7.773690 TCTGCTAACTTTTAGAGGAACAAACTT 59.226 33.333 0.00 0.00 0.00 2.66
97 98 7.280356 TCTGCTAACTTTTAGAGGAACAAACT 58.720 34.615 0.00 0.00 0.00 2.66
98 99 7.492352 TCTGCTAACTTTTAGAGGAACAAAC 57.508 36.000 0.00 0.00 0.00 2.93
99 100 9.959721 ATATCTGCTAACTTTTAGAGGAACAAA 57.040 29.630 0.00 0.00 0.00 2.83
100 101 9.601217 GATATCTGCTAACTTTTAGAGGAACAA 57.399 33.333 0.00 0.00 0.00 2.83
101 102 8.758829 TGATATCTGCTAACTTTTAGAGGAACA 58.241 33.333 3.98 0.00 0.00 3.18
102 103 9.601217 TTGATATCTGCTAACTTTTAGAGGAAC 57.399 33.333 3.98 0.00 0.00 3.62
110 111 9.700831 ACCCTATTTTGATATCTGCTAACTTTT 57.299 29.630 3.98 0.00 0.00 2.27
113 114 8.097662 GCTACCCTATTTTGATATCTGCTAACT 58.902 37.037 3.98 0.00 0.00 2.24
114 115 7.878127 TGCTACCCTATTTTGATATCTGCTAAC 59.122 37.037 3.98 0.00 0.00 2.34
115 116 7.878127 GTGCTACCCTATTTTGATATCTGCTAA 59.122 37.037 3.98 0.00 0.00 3.09
116 117 7.016170 TGTGCTACCCTATTTTGATATCTGCTA 59.984 37.037 3.98 0.00 0.00 3.49
117 118 6.183361 TGTGCTACCCTATTTTGATATCTGCT 60.183 38.462 3.98 0.00 0.00 4.24
118 119 5.997746 TGTGCTACCCTATTTTGATATCTGC 59.002 40.000 3.98 0.00 0.00 4.26
119 120 7.879677 TGATGTGCTACCCTATTTTGATATCTG 59.120 37.037 3.98 0.00 0.00 2.90
120 121 7.977818 TGATGTGCTACCCTATTTTGATATCT 58.022 34.615 3.98 0.00 0.00 1.98
121 122 8.621532 TTGATGTGCTACCCTATTTTGATATC 57.378 34.615 0.00 0.00 0.00 1.63
122 123 9.592196 AATTGATGTGCTACCCTATTTTGATAT 57.408 29.630 0.00 0.00 0.00 1.63
123 124 8.849168 CAATTGATGTGCTACCCTATTTTGATA 58.151 33.333 0.00 0.00 0.00 2.15
124 125 7.201938 CCAATTGATGTGCTACCCTATTTTGAT 60.202 37.037 7.12 0.00 0.00 2.57
125 126 6.096705 CCAATTGATGTGCTACCCTATTTTGA 59.903 38.462 7.12 0.00 0.00 2.69
126 127 6.275335 CCAATTGATGTGCTACCCTATTTTG 58.725 40.000 7.12 0.00 0.00 2.44
127 128 5.163416 GCCAATTGATGTGCTACCCTATTTT 60.163 40.000 7.12 0.00 0.00 1.82
128 129 4.342092 GCCAATTGATGTGCTACCCTATTT 59.658 41.667 7.12 0.00 0.00 1.40
129 130 3.891366 GCCAATTGATGTGCTACCCTATT 59.109 43.478 7.12 0.00 0.00 1.73
130 131 3.117550 TGCCAATTGATGTGCTACCCTAT 60.118 43.478 7.12 0.00 0.00 2.57
131 132 2.240921 TGCCAATTGATGTGCTACCCTA 59.759 45.455 7.12 0.00 0.00 3.53
132 133 1.005805 TGCCAATTGATGTGCTACCCT 59.994 47.619 7.12 0.00 0.00 4.34
133 134 1.134946 GTGCCAATTGATGTGCTACCC 59.865 52.381 7.12 0.00 0.00 3.69
134 135 1.818060 TGTGCCAATTGATGTGCTACC 59.182 47.619 7.12 0.00 0.00 3.18
135 136 2.489329 AGTGTGCCAATTGATGTGCTAC 59.511 45.455 7.12 5.80 0.00 3.58
136 137 2.794103 AGTGTGCCAATTGATGTGCTA 58.206 42.857 7.12 0.00 0.00 3.49
137 138 1.624336 AGTGTGCCAATTGATGTGCT 58.376 45.000 7.12 0.00 0.00 4.40
138 139 3.788333 ATAGTGTGCCAATTGATGTGC 57.212 42.857 7.12 1.96 0.00 4.57
139 140 4.852138 GCTATAGTGTGCCAATTGATGTG 58.148 43.478 7.12 0.00 0.00 3.21
149 150 1.679680 TCAGTACGGCTATAGTGTGCC 59.320 52.381 0.84 0.00 45.25 5.01
150 151 3.372954 CTTCAGTACGGCTATAGTGTGC 58.627 50.000 0.84 4.64 0.00 4.57
151 152 3.066900 AGCTTCAGTACGGCTATAGTGTG 59.933 47.826 0.84 0.00 34.31 3.82
152 153 3.288964 AGCTTCAGTACGGCTATAGTGT 58.711 45.455 0.84 3.50 34.31 3.55
153 154 3.992260 AGCTTCAGTACGGCTATAGTG 57.008 47.619 0.84 0.00 34.31 2.74
154 155 3.700038 ACAAGCTTCAGTACGGCTATAGT 59.300 43.478 0.00 4.23 35.06 2.12
155 156 4.308899 ACAAGCTTCAGTACGGCTATAG 57.691 45.455 0.00 0.00 35.06 1.31
156 157 4.885907 AGTACAAGCTTCAGTACGGCTATA 59.114 41.667 16.93 1.73 43.98 1.31
157 158 3.700038 AGTACAAGCTTCAGTACGGCTAT 59.300 43.478 16.93 2.20 43.98 2.97
158 159 3.087031 AGTACAAGCTTCAGTACGGCTA 58.913 45.455 16.93 0.00 43.98 3.93
159 160 1.893801 AGTACAAGCTTCAGTACGGCT 59.106 47.619 16.93 2.77 43.98 5.52
160 161 1.993370 CAGTACAAGCTTCAGTACGGC 59.007 52.381 16.93 0.19 43.98 5.68
161 162 1.993370 GCAGTACAAGCTTCAGTACGG 59.007 52.381 17.31 17.31 43.98 4.02
162 163 1.649171 CGCAGTACAAGCTTCAGTACG 59.351 52.381 16.93 13.81 43.98 3.67
163 164 1.993370 CCGCAGTACAAGCTTCAGTAC 59.007 52.381 15.78 15.78 40.60 2.73
164 165 1.616865 ACCGCAGTACAAGCTTCAGTA 59.383 47.619 0.00 0.00 0.00 2.74
165 166 0.393077 ACCGCAGTACAAGCTTCAGT 59.607 50.000 0.00 0.00 0.00 3.41
166 167 2.363788 TACCGCAGTACAAGCTTCAG 57.636 50.000 0.00 0.00 0.00 3.02
167 168 2.616960 CATACCGCAGTACAAGCTTCA 58.383 47.619 0.00 0.00 0.00 3.02
168 169 1.933853 CCATACCGCAGTACAAGCTTC 59.066 52.381 0.00 0.00 0.00 3.86
169 170 1.278127 ACCATACCGCAGTACAAGCTT 59.722 47.619 0.00 0.00 0.00 3.74
170 171 0.902531 ACCATACCGCAGTACAAGCT 59.097 50.000 8.41 0.00 0.00 3.74
171 172 1.396996 CAACCATACCGCAGTACAAGC 59.603 52.381 0.00 0.00 0.00 4.01
172 173 2.967362 TCAACCATACCGCAGTACAAG 58.033 47.619 0.00 0.00 0.00 3.16
173 174 3.068560 GTTCAACCATACCGCAGTACAA 58.931 45.455 0.00 0.00 0.00 2.41
174 175 2.300723 AGTTCAACCATACCGCAGTACA 59.699 45.455 0.00 0.00 0.00 2.90
175 176 2.928116 GAGTTCAACCATACCGCAGTAC 59.072 50.000 0.00 0.00 0.00 2.73
176 177 2.416296 CGAGTTCAACCATACCGCAGTA 60.416 50.000 0.00 0.00 0.00 2.74
177 178 1.671850 CGAGTTCAACCATACCGCAGT 60.672 52.381 0.00 0.00 0.00 4.40
178 179 0.999406 CGAGTTCAACCATACCGCAG 59.001 55.000 0.00 0.00 0.00 5.18
179 180 0.604073 TCGAGTTCAACCATACCGCA 59.396 50.000 0.00 0.00 0.00 5.69
180 181 1.935933 ATCGAGTTCAACCATACCGC 58.064 50.000 0.00 0.00 0.00 5.68
181 182 2.864343 GGAATCGAGTTCAACCATACCG 59.136 50.000 0.00 0.00 38.64 4.02
182 183 4.120589 GAGGAATCGAGTTCAACCATACC 58.879 47.826 0.00 0.00 38.64 2.73
183 184 4.120589 GGAGGAATCGAGTTCAACCATAC 58.879 47.826 0.00 0.00 38.64 2.39
184 185 3.181479 CGGAGGAATCGAGTTCAACCATA 60.181 47.826 7.85 0.00 38.64 2.74
185 186 2.418746 CGGAGGAATCGAGTTCAACCAT 60.419 50.000 7.85 0.00 38.64 3.55
186 187 1.067142 CGGAGGAATCGAGTTCAACCA 60.067 52.381 7.85 0.00 38.64 3.67
187 188 1.067071 ACGGAGGAATCGAGTTCAACC 60.067 52.381 0.00 0.00 38.64 3.77
188 189 1.993370 CACGGAGGAATCGAGTTCAAC 59.007 52.381 0.00 0.00 38.64 3.18
189 190 1.067142 CCACGGAGGAATCGAGTTCAA 60.067 52.381 0.00 0.00 41.22 2.69
190 191 0.530744 CCACGGAGGAATCGAGTTCA 59.469 55.000 0.00 0.00 41.22 3.18
191 192 0.531200 ACCACGGAGGAATCGAGTTC 59.469 55.000 2.94 0.00 41.22 3.01
192 193 0.246635 CACCACGGAGGAATCGAGTT 59.753 55.000 2.94 0.00 41.22 3.01
193 194 0.898789 ACACCACGGAGGAATCGAGT 60.899 55.000 2.94 0.00 41.22 4.18
194 195 0.458543 CACACCACGGAGGAATCGAG 60.459 60.000 2.94 0.00 41.22 4.04
195 196 0.896479 TCACACCACGGAGGAATCGA 60.896 55.000 2.94 0.00 41.22 3.59
196 197 0.458543 CTCACACCACGGAGGAATCG 60.459 60.000 2.94 0.00 41.22 3.34
197 198 3.442996 CTCACACCACGGAGGAATC 57.557 57.895 2.94 0.00 41.22 2.52
202 203 1.442769 CAATTCCTCACACCACGGAG 58.557 55.000 0.00 0.00 0.00 4.63
203 204 0.036164 CCAATTCCTCACACCACGGA 59.964 55.000 0.00 0.00 0.00 4.69
204 205 0.250727 ACCAATTCCTCACACCACGG 60.251 55.000 0.00 0.00 0.00 4.94
205 206 0.874390 CACCAATTCCTCACACCACG 59.126 55.000 0.00 0.00 0.00 4.94
206 207 1.880027 GACACCAATTCCTCACACCAC 59.120 52.381 0.00 0.00 0.00 4.16
207 208 1.774254 AGACACCAATTCCTCACACCA 59.226 47.619 0.00 0.00 0.00 4.17
208 209 2.427506 GAGACACCAATTCCTCACACC 58.572 52.381 0.00 0.00 0.00 4.16
209 210 2.069273 CGAGACACCAATTCCTCACAC 58.931 52.381 0.00 0.00 0.00 3.82
210 211 1.691976 ACGAGACACCAATTCCTCACA 59.308 47.619 0.00 0.00 0.00 3.58
211 212 2.069273 CACGAGACACCAATTCCTCAC 58.931 52.381 0.00 0.00 0.00 3.51
212 213 1.967779 TCACGAGACACCAATTCCTCA 59.032 47.619 0.00 0.00 0.00 3.86
213 214 2.743636 TCACGAGACACCAATTCCTC 57.256 50.000 0.00 0.00 0.00 3.71
214 215 3.244561 ACAATCACGAGACACCAATTCCT 60.245 43.478 0.00 0.00 0.00 3.36
215 216 3.074412 ACAATCACGAGACACCAATTCC 58.926 45.455 0.00 0.00 0.00 3.01
216 217 5.390567 GGTTACAATCACGAGACACCAATTC 60.391 44.000 0.00 0.00 0.00 2.17
217 218 4.454504 GGTTACAATCACGAGACACCAATT 59.545 41.667 0.00 0.00 0.00 2.32
218 219 4.000988 GGTTACAATCACGAGACACCAAT 58.999 43.478 0.00 0.00 0.00 3.16
219 220 3.395639 GGTTACAATCACGAGACACCAA 58.604 45.455 0.00 0.00 0.00 3.67
220 221 2.289195 GGGTTACAATCACGAGACACCA 60.289 50.000 0.00 0.00 0.00 4.17
221 222 2.028385 AGGGTTACAATCACGAGACACC 60.028 50.000 0.00 0.00 0.00 4.16
222 223 3.056749 AGAGGGTTACAATCACGAGACAC 60.057 47.826 0.00 0.00 0.00 3.67
223 224 3.162666 AGAGGGTTACAATCACGAGACA 58.837 45.455 0.00 0.00 0.00 3.41
224 225 3.192844 TGAGAGGGTTACAATCACGAGAC 59.807 47.826 0.00 0.00 0.00 3.36
225 226 3.427573 TGAGAGGGTTACAATCACGAGA 58.572 45.455 0.00 0.00 0.00 4.04
226 227 3.868757 TGAGAGGGTTACAATCACGAG 57.131 47.619 0.00 0.00 0.00 4.18
227 228 4.020573 ACAATGAGAGGGTTACAATCACGA 60.021 41.667 0.00 0.00 0.00 4.35
228 229 4.093408 CACAATGAGAGGGTTACAATCACG 59.907 45.833 0.00 0.00 0.00 4.35
229 230 4.396166 CCACAATGAGAGGGTTACAATCAC 59.604 45.833 0.00 0.00 0.00 3.06
230 231 4.288366 TCCACAATGAGAGGGTTACAATCA 59.712 41.667 0.00 0.00 0.00 2.57
231 232 4.843728 TCCACAATGAGAGGGTTACAATC 58.156 43.478 0.00 0.00 0.00 2.67
232 233 4.927267 TCCACAATGAGAGGGTTACAAT 57.073 40.909 0.00 0.00 0.00 2.71
233 234 4.715534 TTCCACAATGAGAGGGTTACAA 57.284 40.909 0.00 0.00 0.00 2.41
234 235 4.927267 ATTCCACAATGAGAGGGTTACA 57.073 40.909 0.00 0.00 0.00 2.41
235 236 7.175990 TGTTTTATTCCACAATGAGAGGGTTAC 59.824 37.037 0.00 0.00 0.00 2.50
236 237 7.235079 TGTTTTATTCCACAATGAGAGGGTTA 58.765 34.615 0.00 0.00 0.00 2.85
237 238 6.074648 TGTTTTATTCCACAATGAGAGGGTT 58.925 36.000 0.00 0.00 0.00 4.11
238 239 5.640147 TGTTTTATTCCACAATGAGAGGGT 58.360 37.500 0.00 0.00 0.00 4.34
239 240 6.183360 GGATGTTTTATTCCACAATGAGAGGG 60.183 42.308 0.00 0.00 31.99 4.30
240 241 6.604795 AGGATGTTTTATTCCACAATGAGAGG 59.395 38.462 0.00 0.00 34.27 3.69
241 242 7.636150 AGGATGTTTTATTCCACAATGAGAG 57.364 36.000 0.00 0.00 34.27 3.20
242 243 8.421249 AAAGGATGTTTTATTCCACAATGAGA 57.579 30.769 0.00 0.00 34.27 3.27
243 244 8.526147 AGAAAGGATGTTTTATTCCACAATGAG 58.474 33.333 0.00 0.00 34.27 2.90
244 245 8.421249 AGAAAGGATGTTTTATTCCACAATGA 57.579 30.769 0.00 0.00 34.27 2.57
245 246 7.761249 GGAGAAAGGATGTTTTATTCCACAATG 59.239 37.037 0.00 0.00 34.27 2.82
246 247 7.093333 GGGAGAAAGGATGTTTTATTCCACAAT 60.093 37.037 0.00 0.00 34.27 2.71
247 248 6.210584 GGGAGAAAGGATGTTTTATTCCACAA 59.789 38.462 0.00 0.00 34.27 3.33
248 249 5.714806 GGGAGAAAGGATGTTTTATTCCACA 59.285 40.000 0.00 0.00 34.27 4.17
249 250 5.127194 GGGGAGAAAGGATGTTTTATTCCAC 59.873 44.000 0.00 0.00 30.04 4.02
250 251 5.269189 GGGGAGAAAGGATGTTTTATTCCA 58.731 41.667 0.00 0.00 30.04 3.53
251 252 4.338400 CGGGGAGAAAGGATGTTTTATTCC 59.662 45.833 0.00 0.00 0.00 3.01
252 253 4.202020 GCGGGGAGAAAGGATGTTTTATTC 60.202 45.833 0.00 0.00 0.00 1.75
253 254 3.699538 GCGGGGAGAAAGGATGTTTTATT 59.300 43.478 0.00 0.00 0.00 1.40
254 255 3.288092 GCGGGGAGAAAGGATGTTTTAT 58.712 45.455 0.00 0.00 0.00 1.40
255 256 2.040545 TGCGGGGAGAAAGGATGTTTTA 59.959 45.455 0.00 0.00 0.00 1.52
256 257 1.203001 TGCGGGGAGAAAGGATGTTTT 60.203 47.619 0.00 0.00 0.00 2.43
257 258 0.404040 TGCGGGGAGAAAGGATGTTT 59.596 50.000 0.00 0.00 0.00 2.83
258 259 0.404040 TTGCGGGGAGAAAGGATGTT 59.596 50.000 0.00 0.00 0.00 2.71
259 260 0.404040 TTTGCGGGGAGAAAGGATGT 59.596 50.000 0.00 0.00 0.00 3.06
260 261 1.544724 TTTTGCGGGGAGAAAGGATG 58.455 50.000 0.00 0.00 0.00 3.51
261 262 2.302587 TTTTTGCGGGGAGAAAGGAT 57.697 45.000 0.00 0.00 0.00 3.24
262 263 3.831651 TTTTTGCGGGGAGAAAGGA 57.168 47.368 0.00 0.00 0.00 3.36
313 317 5.221362 TGGAAACTGTATCACTTTCTCGTGA 60.221 40.000 0.00 0.00 46.82 4.35
316 320 5.230942 ACTGGAAACTGTATCACTTTCTCG 58.769 41.667 0.00 0.00 41.13 4.04
328 332 7.450074 TGTTAAGATATGTGACTGGAAACTGT 58.550 34.615 0.00 0.00 46.09 3.55
329 333 7.905604 TGTTAAGATATGTGACTGGAAACTG 57.094 36.000 0.00 0.00 0.00 3.16
330 334 9.520515 AAATGTTAAGATATGTGACTGGAAACT 57.479 29.630 0.00 0.00 0.00 2.66
333 337 9.295825 ACAAAATGTTAAGATATGTGACTGGAA 57.704 29.630 3.92 0.00 0.00 3.53
334 338 8.862325 ACAAAATGTTAAGATATGTGACTGGA 57.138 30.769 3.92 0.00 0.00 3.86
335 339 9.988350 GTACAAAATGTTAAGATATGTGACTGG 57.012 33.333 11.84 0.00 0.00 4.00
375 379 8.569641 ACGTGCATTAGAACTTTGGTAATTTTA 58.430 29.630 0.00 0.00 0.00 1.52
376 380 7.430441 ACGTGCATTAGAACTTTGGTAATTTT 58.570 30.769 0.00 0.00 0.00 1.82
377 381 6.977213 ACGTGCATTAGAACTTTGGTAATTT 58.023 32.000 0.00 0.00 0.00 1.82
378 382 6.430000 AGACGTGCATTAGAACTTTGGTAATT 59.570 34.615 0.00 0.00 0.00 1.40
379 383 5.938125 AGACGTGCATTAGAACTTTGGTAAT 59.062 36.000 0.00 0.00 0.00 1.89
391 395 3.908382 GCTTCACAAAAGACGTGCATTAG 59.092 43.478 0.00 0.00 34.27 1.73
392 396 3.304391 GGCTTCACAAAAGACGTGCATTA 60.304 43.478 0.00 0.00 34.27 1.90
402 406 5.695851 AACTCTGTATGGCTTCACAAAAG 57.304 39.130 0.00 0.00 0.00 2.27
499 503 2.682136 TCCGTCGCTCCCCAATGA 60.682 61.111 0.00 0.00 0.00 2.57
510 514 4.421479 AGGAACAGCGCTCCGTCG 62.421 66.667 7.13 0.00 38.08 5.12
703 756 1.447314 GCAGGTTAGGGGTTCGTCG 60.447 63.158 0.00 0.00 0.00 5.12
795 853 4.536687 CCGCGGCGAAAGGAATGC 62.537 66.667 25.92 0.00 0.00 3.56
899 958 2.199236 GCGGATCTAACGTAGGGTTTG 58.801 52.381 0.00 0.00 40.09 2.93
976 1035 0.831288 AGTCTCAGCCTCACAGCAGT 60.831 55.000 0.00 0.00 34.23 4.40
1131 1204 1.093159 GAGCTGCCTGTTCTTGGATG 58.907 55.000 0.00 0.00 0.00 3.51
1132 1205 0.392193 CGAGCTGCCTGTTCTTGGAT 60.392 55.000 0.00 0.00 0.00 3.41
1167 1240 5.762711 TGCTGCAAGAAGATGTAAGTTTACA 59.237 36.000 0.00 7.14 41.82 2.41
1222 1295 3.181480 GCAACCGCATACCAATTACCAAT 60.181 43.478 0.00 0.00 38.36 3.16
1223 1296 2.164624 GCAACCGCATACCAATTACCAA 59.835 45.455 0.00 0.00 38.36 3.67
1224 1297 1.746220 GCAACCGCATACCAATTACCA 59.254 47.619 0.00 0.00 38.36 3.25
1225 1298 2.021457 AGCAACCGCATACCAATTACC 58.979 47.619 0.00 0.00 42.27 2.85
1226 1299 3.775661 AAGCAACCGCATACCAATTAC 57.224 42.857 0.00 0.00 42.27 1.89
1227 1300 3.508012 ACAAAGCAACCGCATACCAATTA 59.492 39.130 0.00 0.00 42.27 1.40
1228 1301 2.298729 ACAAAGCAACCGCATACCAATT 59.701 40.909 0.00 0.00 42.27 2.32
1334 1409 4.506288 GGCGGGCAATATATTTCAACAAAC 59.494 41.667 0.00 0.00 0.00 2.93
1335 1410 4.404073 AGGCGGGCAATATATTTCAACAAA 59.596 37.500 3.78 0.00 0.00 2.83
1336 1411 3.957497 AGGCGGGCAATATATTTCAACAA 59.043 39.130 3.78 0.00 0.00 2.83
1337 1412 3.561143 AGGCGGGCAATATATTTCAACA 58.439 40.909 3.78 0.00 0.00 3.33
1338 1413 3.821033 AGAGGCGGGCAATATATTTCAAC 59.179 43.478 3.78 0.00 0.00 3.18
1379 1454 1.599047 CTCCAGCCAACTCATCCGT 59.401 57.895 0.00 0.00 0.00 4.69
1433 1508 7.609097 AGCATTTCTAAGATCCATGTCTCTA 57.391 36.000 0.00 0.00 0.00 2.43
1457 1532 7.180229 TGGAATGAACAATCTCTAAGTCCAGTA 59.820 37.037 0.00 0.00 0.00 2.74
1472 1547 7.047271 TGATGTCTATCGATTGGAATGAACAA 58.953 34.615 1.71 0.00 36.04 2.83
1523 1598 1.535462 GAACACGCTTATTGGCTGTGT 59.465 47.619 9.72 9.72 44.60 3.72
1537 1612 3.304559 GTGCTAGCAGATTACAGAACACG 59.695 47.826 20.03 0.00 0.00 4.49
1645 1722 4.250464 TGATACGTCATTGAGTTTCCACC 58.750 43.478 0.00 0.00 0.00 4.61
1813 1891 6.851609 TGTCAAGCTAAATGCAAATTACGAT 58.148 32.000 0.00 0.00 45.94 3.73
1842 1920 8.562892 CATAGCTTATCTTAAATTGGTGAGTGG 58.437 37.037 0.00 0.00 0.00 4.00
1899 1977 7.615582 TTTCTGTATTCATGAAAGGCACTAG 57.384 36.000 13.09 4.84 38.49 2.57
1955 2033 9.842775 ACACACAATTGATATCAAGAGATATGT 57.157 29.630 21.97 17.24 45.25 2.29
1958 2036 9.538508 CTGACACACAATTGATATCAAGAGATA 57.461 33.333 21.97 0.00 40.80 1.98
1959 2037 7.498239 CCTGACACACAATTGATATCAAGAGAT 59.502 37.037 21.97 4.01 39.47 2.75
1960 2038 6.820152 CCTGACACACAATTGATATCAAGAGA 59.180 38.462 21.97 0.71 39.47 3.10
1961 2039 6.457934 GCCTGACACACAATTGATATCAAGAG 60.458 42.308 21.97 18.05 39.47 2.85
1962 2040 5.355071 GCCTGACACACAATTGATATCAAGA 59.645 40.000 21.97 1.85 39.47 3.02
1963 2041 5.356190 AGCCTGACACACAATTGATATCAAG 59.644 40.000 21.97 12.65 39.47 3.02
1964 2042 5.255687 AGCCTGACACACAATTGATATCAA 58.744 37.500 20.07 20.07 40.51 2.57
1965 2043 4.847198 AGCCTGACACACAATTGATATCA 58.153 39.130 13.59 0.00 0.00 2.15
1966 2044 5.824904 AAGCCTGACACACAATTGATATC 57.175 39.130 13.59 4.78 0.00 1.63
1972 2050 5.451798 CCAGTTAAAAGCCTGACACACAATT 60.452 40.000 0.00 0.00 0.00 2.32
2396 2484 3.081804 CCCACCAGAACAAGATGTAACC 58.918 50.000 0.00 0.00 0.00 2.85
2533 2625 9.214957 TCTTGTACAAACCAAGTCATACTTATG 57.785 33.333 10.03 0.00 36.03 1.90
2554 2646 6.183360 GGCTGCACAAAATAGGAATATCTTGT 60.183 38.462 0.50 0.00 0.00 3.16
2574 2666 4.725790 ATGGTGATAAGAAAAAGGCTGC 57.274 40.909 0.00 0.00 0.00 5.25
2584 2676 9.716531 CTTAGCAATCAAGATATGGTGATAAGA 57.283 33.333 9.98 0.00 41.21 2.10
2604 2696 9.778741 AGTAATGCTTAATAATAGTGCTTAGCA 57.221 29.630 1.39 1.39 35.60 3.49
2648 2740 6.072119 CCAGTACTTTTGTTCCCCTGATAAAC 60.072 42.308 0.00 0.00 0.00 2.01
2837 2929 9.303537 GGCAACAGTAGTTAATTTGTTTGTTTA 57.696 29.630 0.00 0.00 35.85 2.01
2869 2961 5.408909 CCAATCAGCACATTAACAATGCAAA 59.591 36.000 9.40 0.00 42.69 3.68
2879 2971 2.212812 TGTGGCCAATCAGCACATTA 57.787 45.000 7.24 0.00 0.00 1.90
2892 2984 3.243704 TGCACTAAACAGAAAATGTGGCC 60.244 43.478 0.00 0.00 43.00 5.36
2925 3017 8.567948 TCCTCAATGTATTCTTTCACAAACTTC 58.432 33.333 0.00 0.00 0.00 3.01
3045 3137 9.881649 ATAGTAATCAGTACAGATGCCATTATG 57.118 33.333 1.00 0.00 34.88 1.90
3046 3138 9.881649 CATAGTAATCAGTACAGATGCCATTAT 57.118 33.333 1.00 0.00 34.88 1.28
3101 3193 3.691609 CAGTCAAGGGATTGGTTAAGAGC 59.308 47.826 0.00 0.00 0.00 4.09
3385 3480 6.896021 ATCCAATTGATAATTCTCTGCCTG 57.104 37.500 7.12 0.00 0.00 4.85
3451 3546 8.047310 TCATTTCTAACCTGAAGAATACCCTTC 58.953 37.037 0.00 0.00 42.09 3.46
3497 3593 9.612620 CTCAAACAAATCACCAAAGATACTTAC 57.387 33.333 0.00 0.00 0.00 2.34
3516 3612 2.673610 GCAACACCAAACTGCTCAAACA 60.674 45.455 0.00 0.00 33.20 2.83
3738 3834 9.739276 CCAATTAGATATGCTTAATAGAACCCA 57.261 33.333 0.00 0.00 0.00 4.51
3823 3919 6.473455 GGATAAGTAATGCAAACAACTGATGC 59.527 38.462 0.00 5.64 40.45 3.91
3862 3959 7.148573 CGTAGAACATGCAATTCACTTCTAACT 60.149 37.037 14.52 0.00 32.94 2.24
3964 4062 7.266335 GTCTTGAAATTCTTAATGTGACGAACG 59.734 37.037 0.00 0.00 0.00 3.95
3993 4091 7.715265 AACATGTGATCCTTATTGACGATAC 57.285 36.000 0.00 0.00 0.00 2.24
4024 4122 9.788960 GGGTGAAATCTTTGTCTATTCAAATAC 57.211 33.333 0.00 0.00 36.83 1.89
4025 4123 9.527157 TGGGTGAAATCTTTGTCTATTCAAATA 57.473 29.630 0.00 0.00 36.83 1.40
4026 4124 8.421249 TGGGTGAAATCTTTGTCTATTCAAAT 57.579 30.769 0.00 0.00 36.83 2.32
4190 4289 1.911057 TCTCCGAAGAGAACAGCTCA 58.089 50.000 0.00 0.00 46.33 4.26
4278 4377 2.438434 GGGATTCCAGGGTGCGTG 60.438 66.667 4.80 0.00 0.00 5.34
4525 4625 7.177498 TCATGCACAACTTATCATCGATTAC 57.823 36.000 0.00 0.00 0.00 1.89
4631 4731 2.047274 GGCTTGTCGCTGCCTACA 60.047 61.111 0.00 0.00 45.26 2.74
4752 4855 2.193447 CGGTTCCACTCACACATATCG 58.807 52.381 0.00 0.00 0.00 2.92
5051 5169 6.963017 AAACGAACATAGCTTACAAAAACG 57.037 33.333 0.00 0.00 0.00 3.60
5057 5399 7.041644 AGCTTACAAAAACGAACATAGCTTACA 60.042 33.333 0.00 0.00 32.97 2.41
5058 5400 7.295930 AGCTTACAAAAACGAACATAGCTTAC 58.704 34.615 0.00 0.00 32.97 2.34
5060 5402 6.313744 AGCTTACAAAAACGAACATAGCTT 57.686 33.333 0.00 0.00 32.97 3.74
5082 5424 5.689819 AGACGTTTTTGCAAGCTATGTTAG 58.310 37.500 0.00 0.00 0.00 2.34
5084 5426 4.568152 AGACGTTTTTGCAAGCTATGTT 57.432 36.364 0.00 0.00 0.00 2.71
5093 5435 5.473846 TCCCACAATATAAGACGTTTTTGCA 59.526 36.000 0.00 0.00 0.00 4.08
5094 5436 5.798434 GTCCCACAATATAAGACGTTTTTGC 59.202 40.000 0.00 0.00 0.00 3.68
5095 5437 6.319399 GGTCCCACAATATAAGACGTTTTTG 58.681 40.000 0.00 0.00 0.00 2.44
5102 5602 3.244112 CCCTCGGTCCCACAATATAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
5156 5656 5.588648 ACTTTCCACGAATACATAACATGGG 59.411 40.000 0.00 0.00 33.60 4.00
5158 5658 7.072177 ACACTTTCCACGAATACATAACATG 57.928 36.000 0.00 0.00 0.00 3.21
5159 5659 8.958119 ATACACTTTCCACGAATACATAACAT 57.042 30.769 0.00 0.00 0.00 2.71
5189 5689 2.818130 TGAAAATTGCCTCAACCTGC 57.182 45.000 0.00 0.00 0.00 4.85
5242 5742 0.240678 GTCAACATTGCCACGATGCA 59.759 50.000 0.00 0.00 40.07 3.96
5243 5743 0.523072 AGTCAACATTGCCACGATGC 59.477 50.000 0.00 0.00 0.00 3.91
5244 5744 2.995466 AAGTCAACATTGCCACGATG 57.005 45.000 0.00 0.00 0.00 3.84
5245 5745 3.190535 GGTTAAGTCAACATTGCCACGAT 59.809 43.478 0.00 0.00 39.04 3.73
5246 5746 2.550606 GGTTAAGTCAACATTGCCACGA 59.449 45.455 0.00 0.00 39.04 4.35
5247 5747 2.552315 AGGTTAAGTCAACATTGCCACG 59.448 45.455 0.00 0.00 39.04 4.94
5248 5748 3.317993 ACAGGTTAAGTCAACATTGCCAC 59.682 43.478 0.00 0.00 39.04 5.01
5261 5761 3.826157 TGGAAGATTGCCAACAGGTTAAG 59.174 43.478 0.00 0.00 31.13 1.85
5267 5767 0.169672 CGCTGGAAGATTGCCAACAG 59.830 55.000 0.00 0.00 34.07 3.16
5306 5806 0.250901 GACTCCTTGGCTCCTTGCAA 60.251 55.000 0.00 0.00 45.15 4.08
5345 5845 5.974108 TGCATTACAGTAACTAAGGGAGTC 58.026 41.667 0.00 0.00 37.44 3.36
5486 6012 4.437495 CGCCATTTATTTTGCACGAGTATG 59.563 41.667 0.00 0.00 0.00 2.39
5563 6099 1.759236 GAACGGAACTGGAAGGGGT 59.241 57.895 0.00 0.00 39.30 4.95
5567 6104 0.036294 GGGAGGAACGGAACTGGAAG 60.036 60.000 0.00 0.00 42.29 3.46
5569 6106 1.152204 TGGGAGGAACGGAACTGGA 60.152 57.895 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.