Multiple sequence alignment - TraesCS2A01G287700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G287700 chr2A 100.000 4071 0 0 1 4071 491458630 491462700 0.000000e+00 7518.0
1 TraesCS2A01G287700 chr2A 83.832 167 21 6 131 293 463953409 463953245 1.960000e-33 154.0
2 TraesCS2A01G287700 chr5D 92.090 1378 56 20 708 2034 320236902 320238277 0.000000e+00 1892.0
3 TraesCS2A01G287700 chr5D 98.134 268 5 0 2447 2714 320305440 320305707 6.160000e-128 468.0
4 TraesCS2A01G287700 chr5D 90.798 326 25 2 2714 3036 382012442 382012119 8.080000e-117 431.0
5 TraesCS2A01G287700 chr5D 91.456 316 23 2 2714 3026 398553584 398553270 8.080000e-117 431.0
6 TraesCS2A01G287700 chr5D 88.816 304 25 4 1051 1345 30424084 30423781 8.320000e-97 364.0
7 TraesCS2A01G287700 chr5D 91.549 142 11 1 2997 3137 320306474 320306615 1.150000e-45 195.0
8 TraesCS2A01G287700 chr5D 95.789 95 4 0 2307 2401 398553835 398553741 1.960000e-33 154.0
9 TraesCS2A01G287700 chr5D 79.612 206 18 17 703 908 555449714 555449895 4.270000e-25 126.0
10 TraesCS2A01G287700 chr5D 89.610 77 4 2 2510 2582 382012666 382012590 1.200000e-15 95.3
11 TraesCS2A01G287700 chr2D 95.731 937 37 3 3135 4070 364833896 364834830 0.000000e+00 1506.0
12 TraesCS2A01G287700 chr2D 95.519 915 35 4 3135 4046 364675329 364676240 0.000000e+00 1458.0
13 TraesCS2A01G287700 chr2D 89.216 714 61 12 1 704 364833148 364833855 0.000000e+00 878.0
14 TraesCS2A01G287700 chr2D 89.091 715 62 12 1 704 364674579 364675288 0.000000e+00 874.0
15 TraesCS2A01G287700 chr2D 86.184 152 16 5 2988 3137 118799098 118798950 4.210000e-35 159.0
16 TraesCS2A01G287700 chr2D 92.105 76 5 1 1939 2014 595906560 595906634 5.570000e-19 106.0
17 TraesCS2A01G287700 chr2D 87.654 81 7 2 3138 3218 406958489 406958412 1.560000e-14 91.6
18 TraesCS2A01G287700 chr7D 87.500 1088 91 24 708 1755 111371952 111370870 0.000000e+00 1214.0
19 TraesCS2A01G287700 chr7D 97.015 268 8 0 2447 2714 174291967 174292234 6.210000e-123 451.0
20 TraesCS2A01G287700 chr7D 94.156 154 9 0 2038 2191 174291726 174291879 6.800000e-58 235.0
21 TraesCS2A01G287700 chr7D 92.517 147 8 2 2997 3140 134509622 134509768 1.480000e-49 207.0
22 TraesCS2A01G287700 chr7D 90.196 153 13 2 2876 3026 134509437 134509589 8.930000e-47 198.0
23 TraesCS2A01G287700 chr7D 82.143 168 26 4 135 299 393115650 393115484 1.530000e-29 141.0
24 TraesCS2A01G287700 chr7D 96.053 76 2 1 1939 2014 136258229 136258155 5.530000e-24 122.0
25 TraesCS2A01G287700 chr7D 79.651 172 31 3 135 304 33818185 33818016 1.990000e-23 121.0
26 TraesCS2A01G287700 chr7D 90.909 55 3 2 2088 2141 599483541 599483488 5.640000e-09 73.1
27 TraesCS2A01G287700 chr3A 93.623 737 30 7 922 1652 30181134 30181859 0.000000e+00 1085.0
28 TraesCS2A01G287700 chr3A 90.596 319 25 2 2711 3026 30184454 30184770 6.290000e-113 418.0
29 TraesCS2A01G287700 chr3A 92.638 163 12 0 2864 3026 458177356 458177194 6.800000e-58 235.0
30 TraesCS2A01G287700 chr3A 91.667 144 9 2 2997 3137 458177161 458177018 3.210000e-46 196.0
31 TraesCS2A01G287700 chr3A 94.737 95 5 0 2307 2401 744176386 744176480 9.120000e-32 148.0
32 TraesCS2A01G287700 chr3A 90.541 74 3 2 2510 2579 235364291 235364364 1.200000e-15 95.3
33 TraesCS2A01G287700 chr3A 88.608 79 6 3 882 960 739547155 739547230 4.330000e-15 93.5
34 TraesCS2A01G287700 chr3B 85.557 907 61 24 2275 3138 158154420 158155299 0.000000e+00 885.0
35 TraesCS2A01G287700 chr3B 86.058 789 44 27 2390 3136 46798271 46797507 0.000000e+00 787.0
36 TraesCS2A01G287700 chr3B 94.500 200 7 2 1558 1753 760024918 760024719 5.110000e-79 305.0
37 TraesCS2A01G287700 chr3B 93.382 136 9 0 2259 2394 46802187 46802052 6.900000e-48 202.0
38 TraesCS2A01G287700 chr3B 88.608 79 6 3 882 960 263252005 263252080 4.330000e-15 93.5
39 TraesCS2A01G287700 chr2B 94.921 571 20 7 3135 3704 432896842 432897404 0.000000e+00 885.0
40 TraesCS2A01G287700 chr2B 89.136 718 53 15 1 707 432896101 432896804 0.000000e+00 870.0
41 TraesCS2A01G287700 chr2B 94.764 382 16 4 3690 4070 432897420 432897798 3.500000e-165 592.0
42 TraesCS2A01G287700 chr2B 87.541 305 25 7 1051 1345 151105606 151105305 1.400000e-89 340.0
43 TraesCS2A01G287700 chr2B 79.651 172 30 5 126 293 55824460 55824290 7.150000e-23 119.0
44 TraesCS2A01G287700 chr2B 79.310 174 27 5 126 293 538645145 538645315 3.330000e-21 113.0
45 TraesCS2A01G287700 chr2B 86.420 81 8 2 3138 3218 482739099 482739022 7.250000e-13 86.1
46 TraesCS2A01G287700 chr6B 88.205 780 35 13 2259 3026 404362348 404361614 0.000000e+00 878.0
47 TraesCS2A01G287700 chr6B 92.611 203 11 2 1555 1753 105644340 105644542 5.150000e-74 289.0
48 TraesCS2A01G287700 chr6B 89.583 144 12 2 2997 3137 404361584 404361441 3.230000e-41 180.0
49 TraesCS2A01G287700 chr1D 97.388 268 5 1 2447 2714 486921296 486921561 4.800000e-124 455.0
50 TraesCS2A01G287700 chr1D 95.294 170 7 1 2030 2199 486921048 486921216 6.710000e-68 268.0
51 TraesCS2A01G287700 chr1D 81.481 81 10 4 3139 3218 203429924 203430000 1.220000e-05 62.1
52 TraesCS2A01G287700 chr1A 94.485 272 8 3 1766 2034 232345660 232345927 2.930000e-111 412.0
53 TraesCS2A01G287700 chr1A 84.877 324 23 12 2714 3034 562929642 562929342 1.840000e-78 303.0
54 TraesCS2A01G287700 chr1A 90.187 214 15 3 1408 1616 562936279 562936067 1.440000e-69 274.0
55 TraesCS2A01G287700 chr1A 90.148 203 16 4 713 915 232344913 232345111 1.120000e-65 261.0
56 TraesCS2A01G287700 chr1A 76.316 266 39 19 703 960 574278773 574279022 1.990000e-23 121.0
57 TraesCS2A01G287700 chr1A 89.610 77 4 2 2510 2582 562929866 562929790 1.200000e-15 95.3
58 TraesCS2A01G287700 chr1A 100.000 32 0 0 3187 3218 547583508 547583539 4.390000e-05 60.2
59 TraesCS2A01G287700 chr5B 88.554 332 31 4 2711 3038 686045944 686046272 2.950000e-106 396.0
60 TraesCS2A01G287700 chr5B 88.742 302 24 5 1051 1343 22505936 22505636 1.080000e-95 361.0
61 TraesCS2A01G287700 chr4A 92.019 213 11 3 1545 1753 675415234 675415444 1.110000e-75 294.0
62 TraesCS2A01G287700 chr4B 92.500 200 11 2 1558 1753 546097430 546097231 2.400000e-72 283.0
63 TraesCS2A01G287700 chr4B 89.873 79 5 3 882 960 410812719 410812644 9.310000e-17 99.0
64 TraesCS2A01G287700 chr7A 85.338 266 14 9 2714 2976 729054412 729054169 6.750000e-63 252.0
65 TraesCS2A01G287700 chr7A 84.795 171 23 2 126 293 152549254 152549424 7.000000e-38 169.0
66 TraesCS2A01G287700 chr5A 87.387 222 11 4 708 929 591601988 591602192 5.260000e-59 239.0
67 TraesCS2A01G287700 chr5A 91.716 169 14 0 2858 3026 591619678 591619846 6.800000e-58 235.0
68 TraesCS2A01G287700 chr5A 84.959 246 15 6 708 942 296659569 296659803 3.170000e-56 230.0
69 TraesCS2A01G287700 chr5A 90.345 145 9 3 2997 3138 12882114 12882256 6.950000e-43 185.0
70 TraesCS2A01G287700 chr5A 85.621 153 16 6 2988 3138 280758756 280758904 5.450000e-34 156.0
71 TraesCS2A01G287700 chr7B 90.000 130 5 4 1537 1662 708808503 708808378 1.170000e-35 161.0
72 TraesCS2A01G287700 chr7B 83.750 80 10 2 3142 3221 106804178 106804254 5.640000e-09 73.1
73 TraesCS2A01G287700 chr1B 82.955 176 21 5 2966 3137 678107159 678107329 2.530000e-32 150.0
74 TraesCS2A01G287700 chr1B 88.608 79 6 3 882 960 373694735 373694660 4.330000e-15 93.5
75 TraesCS2A01G287700 chr1B 81.481 81 10 5 3139 3218 297296450 297296526 1.220000e-05 62.1
76 TraesCS2A01G287700 chr3D 94.937 79 3 1 1936 2014 523262692 523262769 5.530000e-24 122.0
77 TraesCS2A01G287700 chr4D 85.714 98 10 4 867 964 301293654 301293561 2.590000e-17 100.0
78 TraesCS2A01G287700 chrUn 88.608 79 6 3 882 960 341584673 341584748 4.330000e-15 93.5
79 TraesCS2A01G287700 chr6A 84.211 76 2 3 1939 2014 583816686 583816621 9.450000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G287700 chr2A 491458630 491462700 4070 False 7518.000000 7518 100.000000 1 4071 1 chr2A.!!$F1 4070
1 TraesCS2A01G287700 chr5D 320236902 320238277 1375 False 1892.000000 1892 92.090000 708 2034 1 chr5D.!!$F1 1326
2 TraesCS2A01G287700 chr5D 320305440 320306615 1175 False 331.500000 468 94.841500 2447 3137 2 chr5D.!!$F3 690
3 TraesCS2A01G287700 chr5D 398553270 398553835 565 True 292.500000 431 93.622500 2307 3026 2 chr5D.!!$R3 719
4 TraesCS2A01G287700 chr5D 382012119 382012666 547 True 263.150000 431 90.204000 2510 3036 2 chr5D.!!$R2 526
5 TraesCS2A01G287700 chr2D 364833148 364834830 1682 False 1192.000000 1506 92.473500 1 4070 2 chr2D.!!$F3 4069
6 TraesCS2A01G287700 chr2D 364674579 364676240 1661 False 1166.000000 1458 92.305000 1 4046 2 chr2D.!!$F2 4045
7 TraesCS2A01G287700 chr7D 111370870 111371952 1082 True 1214.000000 1214 87.500000 708 1755 1 chr7D.!!$R2 1047
8 TraesCS2A01G287700 chr7D 174291726 174292234 508 False 343.000000 451 95.585500 2038 2714 2 chr7D.!!$F2 676
9 TraesCS2A01G287700 chr3A 30181134 30184770 3636 False 751.500000 1085 92.109500 922 3026 2 chr3A.!!$F4 2104
10 TraesCS2A01G287700 chr3B 158154420 158155299 879 False 885.000000 885 85.557000 2275 3138 1 chr3B.!!$F1 863
11 TraesCS2A01G287700 chr3B 46797507 46802187 4680 True 494.500000 787 89.720000 2259 3136 2 chr3B.!!$R2 877
12 TraesCS2A01G287700 chr2B 432896101 432897798 1697 False 782.333333 885 92.940333 1 4070 3 chr2B.!!$F2 4069
13 TraesCS2A01G287700 chr6B 404361441 404362348 907 True 529.000000 878 88.894000 2259 3137 2 chr6B.!!$R1 878
14 TraesCS2A01G287700 chr1D 486921048 486921561 513 False 361.500000 455 96.341000 2030 2714 2 chr1D.!!$F2 684
15 TraesCS2A01G287700 chr1A 232344913 232345927 1014 False 336.500000 412 92.316500 713 2034 2 chr1A.!!$F3 1321

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
964 1035 0.321919 CACTCACACCCCACATCCAG 60.322 60.0 0.0 0.0 0.00 3.86 F
981 1102 1.250328 CAGGGTCAAGCTTTGATGCA 58.750 50.0 0.0 0.0 42.47 3.96 F
1464 1619 1.457823 TTGGAGCAAGCAACAGCAGG 61.458 55.0 0.0 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 3323 0.748367 TGTACAGCACACGCCCAAAA 60.748 50.0 0.00 0.0 39.83 2.44 R
2921 9660 0.758685 CGAGAGCCAGATCCCCTCTT 60.759 60.0 8.31 0.0 36.16 2.85 R
3293 10096 0.035056 CGGAGACAAGGCCAAGGAAT 60.035 55.0 5.01 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 126 6.038356 GCATACATTTTCAATAGTGCTGCTT 58.962 36.000 0.00 0.00 0.00 3.91
126 127 6.197842 GCATACATTTTCAATAGTGCTGCTTC 59.802 38.462 0.00 0.00 0.00 3.86
147 148 3.379372 TCCGTCTGGGTTTATTAGTCTCG 59.621 47.826 0.00 0.00 37.00 4.04
150 151 5.213675 CGTCTGGGTTTATTAGTCTCGATC 58.786 45.833 0.00 0.00 0.00 3.69
190 191 8.918202 AGTTTGACCACATATTTGACTAGAAA 57.082 30.769 0.00 0.00 0.00 2.52
191 192 8.784043 AGTTTGACCACATATTTGACTAGAAAC 58.216 33.333 0.00 0.00 0.00 2.78
249 252 9.513906 TGGATTCATATTTGAGTGTAGTTTTCA 57.486 29.630 0.00 0.00 32.27 2.69
329 334 5.451354 AGAGAGGGACTAGTAAATCAGGAC 58.549 45.833 0.00 0.00 41.55 3.85
341 346 4.323553 AAATCAGGACGGATGTAGTAGC 57.676 45.455 0.00 0.00 0.00 3.58
347 352 4.218635 CAGGACGGATGTAGTAGCACATAT 59.781 45.833 0.00 0.00 39.25 1.78
391 396 8.732854 TCATCTACCCTGGGAAATGTATAAAAT 58.267 33.333 22.23 0.00 0.00 1.82
432 440 7.080724 CACAGATCAAGAGAAAGTAAAAAGCC 58.919 38.462 0.00 0.00 0.00 4.35
437 445 8.648557 ATCAAGAGAAAGTAAAAAGCCAAAAC 57.351 30.769 0.00 0.00 0.00 2.43
535 544 1.202989 TCTGGCAATGCAACCCTACAA 60.203 47.619 7.79 0.00 0.00 2.41
541 550 0.323725 ATGCAACCCTACAAGGCAGG 60.324 55.000 0.00 0.00 37.96 4.85
571 580 1.074775 AGCAAATGGCCTCACCGAA 59.925 52.632 3.32 0.00 46.50 4.30
603 612 6.408206 GCTAGCCCCATATAAACTATGTAGGG 60.408 46.154 2.29 0.00 32.74 3.53
606 615 6.158695 AGCCCCATATAAACTATGTAGGGATG 59.841 42.308 9.47 0.00 37.22 3.51
638 650 1.172180 CGTGTGACCCAAACAGCCAT 61.172 55.000 0.00 0.00 0.00 4.40
652 664 3.736100 CCATTTGCGCGCTCACCA 61.736 61.111 33.29 8.62 0.00 4.17
941 990 4.838152 CCATCCACTCGCACCCCG 62.838 72.222 0.00 0.00 38.61 5.73
963 1034 1.760527 CACTCACACCCCACATCCA 59.239 57.895 0.00 0.00 0.00 3.41
964 1035 0.321919 CACTCACACCCCACATCCAG 60.322 60.000 0.00 0.00 0.00 3.86
981 1102 1.250328 CAGGGTCAAGCTTTGATGCA 58.750 50.000 0.00 0.00 42.47 3.96
1001 1122 1.747145 CTGCTCTGGATCTGGCGAT 59.253 57.895 0.00 0.00 0.00 4.58
1029 1150 2.427753 GATGCGGGAGATGGGGAC 59.572 66.667 0.00 0.00 0.00 4.46
1257 1378 3.542742 GACGGCTACGCGCTCAAC 61.543 66.667 5.73 0.00 46.04 3.18
1379 1534 2.457598 TGGAGCAGTAGACCTTGTAGG 58.542 52.381 0.00 0.00 42.49 3.18
1444 1599 4.141390 TGCTCTTCCCTTCTCTTCTTGTTT 60.141 41.667 0.00 0.00 0.00 2.83
1457 1612 3.883830 TCTTGTTTTTGGAGCAAGCAA 57.116 38.095 0.00 0.00 39.36 3.91
1464 1619 1.457823 TTGGAGCAAGCAACAGCAGG 61.458 55.000 0.00 0.00 0.00 4.85
1493 1648 6.449635 TTGTGCAAGTAGACTTCAACAAAT 57.550 33.333 13.31 0.00 36.33 2.32
1551 1706 2.034558 GGTGCTTGCTTGCTTTAGACAA 59.965 45.455 3.47 0.00 0.00 3.18
1556 1711 4.734695 GCTTGCTTGCTTTAGACAAACAGT 60.735 41.667 0.00 0.00 0.00 3.55
1662 1822 9.892130 CTCTTAGGTGAATTTTAGGTGAAGTAT 57.108 33.333 0.00 0.00 0.00 2.12
1810 3069 4.421033 TGAGTAGTTCTTGCAGTAGTCG 57.579 45.455 0.00 0.00 0.00 4.18
1967 3250 5.070770 TGTGATACACATGCCCAATTTTC 57.929 39.130 0.25 0.00 39.62 2.29
2030 3313 9.715121 AATCAGCAACAATCATTTCAGTTAATT 57.285 25.926 0.00 0.00 0.00 1.40
2034 3317 9.545105 AGCAACAATCATTTCAGTTAATTTTCA 57.455 25.926 0.00 0.00 0.00 2.69
2035 3318 9.801714 GCAACAATCATTTCAGTTAATTTTCAG 57.198 29.630 0.00 0.00 0.00 3.02
2047 3330 9.267084 TCAGTTAATTTTCAGTTAATTTTGGGC 57.733 29.630 0.00 0.00 0.00 5.36
2053 3336 2.058057 CAGTTAATTTTGGGCGTGTGC 58.942 47.619 0.00 0.00 41.71 4.57
2192 3475 4.036734 TCATGTCCAACTGAACTTTTCTGC 59.963 41.667 0.00 0.00 32.51 4.26
2194 3477 3.761218 TGTCCAACTGAACTTTTCTGCAA 59.239 39.130 0.00 0.00 32.51 4.08
2218 3501 9.810231 CAAGTTTGCATTTTTATGAATGTAACC 57.190 29.630 0.00 0.00 39.97 2.85
2219 3502 9.553064 AAGTTTGCATTTTTATGAATGTAACCA 57.447 25.926 0.00 0.00 39.97 3.67
2220 3503 8.987890 AGTTTGCATTTTTATGAATGTAACCAC 58.012 29.630 0.00 0.02 39.97 4.16
2221 3504 7.897575 TTGCATTTTTATGAATGTAACCACC 57.102 32.000 0.00 0.00 36.92 4.61
2222 3505 6.997655 TGCATTTTTATGAATGTAACCACCA 58.002 32.000 0.00 0.00 38.86 4.17
2223 3506 7.095910 TGCATTTTTATGAATGTAACCACCAG 58.904 34.615 0.00 0.00 38.86 4.00
2224 3507 7.096551 GCATTTTTATGAATGTAACCACCAGT 58.903 34.615 0.00 0.00 38.86 4.00
2225 3508 8.247562 GCATTTTTATGAATGTAACCACCAGTA 58.752 33.333 0.00 0.00 38.86 2.74
2226 3509 9.787532 CATTTTTATGAATGTAACCACCAGTAG 57.212 33.333 0.00 0.00 33.39 2.57
2227 3510 8.927675 TTTTTATGAATGTAACCACCAGTAGT 57.072 30.769 0.00 0.00 0.00 2.73
2228 3511 8.927675 TTTTATGAATGTAACCACCAGTAGTT 57.072 30.769 0.00 0.00 0.00 2.24
2229 3512 8.927675 TTTATGAATGTAACCACCAGTAGTTT 57.072 30.769 0.00 0.00 0.00 2.66
2230 3513 8.927675 TTATGAATGTAACCACCAGTAGTTTT 57.072 30.769 0.00 0.00 0.00 2.43
2233 3516 8.927675 TGAATGTAACCACCAGTAGTTTTATT 57.072 30.769 0.00 0.00 0.00 1.40
2234 3517 9.357161 TGAATGTAACCACCAGTAGTTTTATTT 57.643 29.630 0.00 0.00 0.00 1.40
2238 3521 8.732531 TGTAACCACCAGTAGTTTTATTTATGC 58.267 33.333 0.00 0.00 0.00 3.14
2239 3522 7.768807 AACCACCAGTAGTTTTATTTATGCA 57.231 32.000 0.00 0.00 0.00 3.96
2240 3523 7.954666 ACCACCAGTAGTTTTATTTATGCAT 57.045 32.000 3.79 3.79 0.00 3.96
2241 3524 7.996385 ACCACCAGTAGTTTTATTTATGCATC 58.004 34.615 0.19 0.00 0.00 3.91
2242 3525 7.834181 ACCACCAGTAGTTTTATTTATGCATCT 59.166 33.333 0.19 0.00 0.00 2.90
2243 3526 8.345565 CCACCAGTAGTTTTATTTATGCATCTC 58.654 37.037 0.19 0.00 0.00 2.75
2244 3527 8.892723 CACCAGTAGTTTTATTTATGCATCTCA 58.107 33.333 0.19 0.00 0.00 3.27
2245 3528 9.461312 ACCAGTAGTTTTATTTATGCATCTCAA 57.539 29.630 0.19 0.00 0.00 3.02
2257 3540 8.991243 TTTATGCATCTCAAAAGAAATCTTGG 57.009 30.769 0.19 0.00 36.12 3.61
2271 3554 8.712285 AAGAAATCTTGGATATGCAAATTGTG 57.288 30.769 11.06 0.00 34.38 3.33
2516 8391 5.850557 ATTGTGTGTTTCCTCATCAAACA 57.149 34.783 0.00 0.00 40.62 2.83
3026 9767 2.754658 GGGAAGGAGCGACGGAGA 60.755 66.667 0.00 0.00 0.00 3.71
3053 9856 0.370273 CGACCCGAGCGATTTCAAAG 59.630 55.000 0.00 0.00 0.00 2.77
3055 9858 0.605319 ACCCGAGCGATTTCAAAGCA 60.605 50.000 0.00 0.00 0.00 3.91
3102 9905 1.124780 TCACCTGGTCGGAAAAGACA 58.875 50.000 0.00 0.00 42.62 3.41
3142 9945 3.345508 GGAACGGAGGGAGTATTTGTT 57.654 47.619 0.00 0.00 0.00 2.83
3143 9946 3.268330 GGAACGGAGGGAGTATTTGTTC 58.732 50.000 0.00 0.00 34.89 3.18
3144 9947 3.307199 GGAACGGAGGGAGTATTTGTTCA 60.307 47.826 4.81 0.00 36.77 3.18
3145 9948 3.329929 ACGGAGGGAGTATTTGTTCAC 57.670 47.619 0.00 0.00 0.00 3.18
3146 9949 2.904434 ACGGAGGGAGTATTTGTTCACT 59.096 45.455 0.00 0.00 0.00 3.41
3147 9950 3.326880 ACGGAGGGAGTATTTGTTCACTT 59.673 43.478 0.00 0.00 0.00 3.16
3148 9951 4.529377 ACGGAGGGAGTATTTGTTCACTTA 59.471 41.667 0.00 0.00 0.00 2.24
3149 9952 5.189145 ACGGAGGGAGTATTTGTTCACTTAT 59.811 40.000 0.00 0.00 0.00 1.73
3150 9953 6.113411 CGGAGGGAGTATTTGTTCACTTATT 58.887 40.000 0.00 0.00 0.00 1.40
3151 9954 6.598064 CGGAGGGAGTATTTGTTCACTTATTT 59.402 38.462 0.00 0.00 0.00 1.40
3152 9955 7.201617 CGGAGGGAGTATTTGTTCACTTATTTC 60.202 40.741 0.00 0.00 0.00 2.17
3153 9956 7.610305 GGAGGGAGTATTTGTTCACTTATTTCA 59.390 37.037 0.00 0.00 0.00 2.69
3154 9957 8.567285 AGGGAGTATTTGTTCACTTATTTCAG 57.433 34.615 0.00 0.00 0.00 3.02
3155 9958 8.164070 AGGGAGTATTTGTTCACTTATTTCAGT 58.836 33.333 0.00 0.00 0.00 3.41
3156 9959 9.444600 GGGAGTATTTGTTCACTTATTTCAGTA 57.555 33.333 0.00 0.00 0.00 2.74
3163 9966 9.787435 TTTGTTCACTTATTTCAGTAGGTATGT 57.213 29.630 0.00 0.00 0.00 2.29
3212 10015 9.855021 AAAACATCTTATAATTTGAAACGGAGG 57.145 29.630 2.71 0.00 0.00 4.30
3213 10016 7.568199 ACATCTTATAATTTGAAACGGAGGG 57.432 36.000 2.71 0.00 0.00 4.30
3214 10017 7.343357 ACATCTTATAATTTGAAACGGAGGGA 58.657 34.615 2.71 0.00 0.00 4.20
3215 10018 7.499232 ACATCTTATAATTTGAAACGGAGGGAG 59.501 37.037 2.71 0.00 0.00 4.30
3216 10019 6.954232 TCTTATAATTTGAAACGGAGGGAGT 58.046 36.000 0.00 0.00 0.00 3.85
3217 10020 8.081517 TCTTATAATTTGAAACGGAGGGAGTA 57.918 34.615 0.00 0.00 0.00 2.59
3218 10021 8.711170 TCTTATAATTTGAAACGGAGGGAGTAT 58.289 33.333 0.00 0.00 0.00 2.12
3219 10022 9.991906 CTTATAATTTGAAACGGAGGGAGTATA 57.008 33.333 0.00 0.00 0.00 1.47
3221 10024 8.848474 ATAATTTGAAACGGAGGGAGTATATG 57.152 34.615 0.00 0.00 0.00 1.78
3222 10025 5.943349 TTTGAAACGGAGGGAGTATATGA 57.057 39.130 0.00 0.00 0.00 2.15
3223 10026 5.531122 TTGAAACGGAGGGAGTATATGAG 57.469 43.478 0.00 0.00 0.00 2.90
3224 10027 4.800023 TGAAACGGAGGGAGTATATGAGA 58.200 43.478 0.00 0.00 0.00 3.27
3225 10028 4.827835 TGAAACGGAGGGAGTATATGAGAG 59.172 45.833 0.00 0.00 0.00 3.20
3226 10029 4.726035 AACGGAGGGAGTATATGAGAGA 57.274 45.455 0.00 0.00 0.00 3.10
3227 10030 4.938575 ACGGAGGGAGTATATGAGAGAT 57.061 45.455 0.00 0.00 0.00 2.75
3228 10031 5.263872 ACGGAGGGAGTATATGAGAGATT 57.736 43.478 0.00 0.00 0.00 2.40
3229 10032 5.646215 ACGGAGGGAGTATATGAGAGATTT 58.354 41.667 0.00 0.00 0.00 2.17
3230 10033 6.791371 ACGGAGGGAGTATATGAGAGATTTA 58.209 40.000 0.00 0.00 0.00 1.40
3231 10034 7.415086 ACGGAGGGAGTATATGAGAGATTTAT 58.585 38.462 0.00 0.00 0.00 1.40
3232 10035 8.558312 ACGGAGGGAGTATATGAGAGATTTATA 58.442 37.037 0.00 0.00 0.00 0.98
3233 10036 9.409918 CGGAGGGAGTATATGAGAGATTTATAA 57.590 37.037 0.00 0.00 0.00 0.98
3236 10039 9.191479 AGGGAGTATATGAGAGATTTATAACCG 57.809 37.037 0.00 0.00 0.00 4.44
3237 10040 8.968969 GGGAGTATATGAGAGATTTATAACCGT 58.031 37.037 0.00 0.00 0.00 4.83
3238 10041 9.790389 GGAGTATATGAGAGATTTATAACCGTG 57.210 37.037 0.00 0.00 0.00 4.94
3243 10046 5.348986 TGAGAGATTTATAACCGTGAGTGC 58.651 41.667 0.00 0.00 0.00 4.40
3244 10047 5.105513 TGAGAGATTTATAACCGTGAGTGCA 60.106 40.000 0.00 0.00 0.00 4.57
3245 10048 5.109903 AGAGATTTATAACCGTGAGTGCAC 58.890 41.667 9.40 9.40 41.67 4.57
3261 10064 3.096541 CACGCATGCAAAAGGACTG 57.903 52.632 19.57 0.00 0.00 3.51
3262 10065 1.005294 CACGCATGCAAAAGGACTGC 61.005 55.000 19.57 0.00 40.35 4.40
3269 10072 2.649190 TGCAAAAGGACTGCACTAACA 58.351 42.857 0.00 0.00 44.67 2.41
3270 10073 2.357637 TGCAAAAGGACTGCACTAACAC 59.642 45.455 0.00 0.00 44.67 3.32
3271 10074 2.357637 GCAAAAGGACTGCACTAACACA 59.642 45.455 0.00 0.00 39.69 3.72
3272 10075 3.548818 GCAAAAGGACTGCACTAACACAG 60.549 47.826 0.00 0.00 39.69 3.66
3273 10076 3.838244 AAAGGACTGCACTAACACAGA 57.162 42.857 0.00 0.00 37.35 3.41
3274 10077 4.357918 AAAGGACTGCACTAACACAGAT 57.642 40.909 0.00 0.00 37.35 2.90
3275 10078 3.601443 AGGACTGCACTAACACAGATC 57.399 47.619 0.00 0.00 37.35 2.75
3276 10079 2.899900 AGGACTGCACTAACACAGATCA 59.100 45.455 0.00 0.00 37.35 2.92
3277 10080 3.324846 AGGACTGCACTAACACAGATCAA 59.675 43.478 0.00 0.00 37.35 2.57
3278 10081 4.019860 AGGACTGCACTAACACAGATCAAT 60.020 41.667 0.00 0.00 37.35 2.57
3279 10082 4.697352 GGACTGCACTAACACAGATCAATT 59.303 41.667 0.00 0.00 37.35 2.32
3280 10083 5.874810 GGACTGCACTAACACAGATCAATTA 59.125 40.000 0.00 0.00 37.35 1.40
3281 10084 6.371548 GGACTGCACTAACACAGATCAATTAA 59.628 38.462 0.00 0.00 37.35 1.40
3282 10085 7.369803 ACTGCACTAACACAGATCAATTAAG 57.630 36.000 0.00 0.00 37.35 1.85
3283 10086 6.936900 ACTGCACTAACACAGATCAATTAAGT 59.063 34.615 0.00 0.00 37.35 2.24
3284 10087 8.094548 ACTGCACTAACACAGATCAATTAAGTA 58.905 33.333 0.00 0.00 37.35 2.24
3285 10088 8.840833 TGCACTAACACAGATCAATTAAGTAA 57.159 30.769 0.00 0.00 0.00 2.24
3286 10089 8.717821 TGCACTAACACAGATCAATTAAGTAAC 58.282 33.333 0.00 0.00 0.00 2.50
3287 10090 8.717821 GCACTAACACAGATCAATTAAGTAACA 58.282 33.333 0.00 0.00 0.00 2.41
3289 10092 9.772973 ACTAACACAGATCAATTAAGTAACACA 57.227 29.630 0.00 0.00 0.00 3.72
3302 10105 9.869757 AATTAAGTAACACAATTATTCCTTGGC 57.130 29.630 0.00 0.00 0.00 4.52
3303 10106 5.914898 AGTAACACAATTATTCCTTGGCC 57.085 39.130 0.00 0.00 0.00 5.36
3304 10107 5.580022 AGTAACACAATTATTCCTTGGCCT 58.420 37.500 3.32 0.00 0.00 5.19
3305 10108 6.016555 AGTAACACAATTATTCCTTGGCCTT 58.983 36.000 3.32 0.00 0.00 4.35
3306 10109 4.806640 ACACAATTATTCCTTGGCCTTG 57.193 40.909 3.32 0.00 0.00 3.61
3307 10110 4.159557 ACACAATTATTCCTTGGCCTTGT 58.840 39.130 3.32 0.00 0.00 3.16
3308 10111 4.220602 ACACAATTATTCCTTGGCCTTGTC 59.779 41.667 3.32 0.00 0.00 3.18
3309 10112 4.463891 CACAATTATTCCTTGGCCTTGTCT 59.536 41.667 3.32 0.00 0.00 3.41
3310 10113 4.706962 ACAATTATTCCTTGGCCTTGTCTC 59.293 41.667 3.32 0.00 0.00 3.36
3311 10114 3.366052 TTATTCCTTGGCCTTGTCTCC 57.634 47.619 3.32 0.00 0.00 3.71
3312 10115 0.035056 ATTCCTTGGCCTTGTCTCCG 60.035 55.000 3.32 0.00 0.00 4.63
3313 10116 1.415672 TTCCTTGGCCTTGTCTCCGT 61.416 55.000 3.32 0.00 0.00 4.69
3314 10117 1.073199 CCTTGGCCTTGTCTCCGTT 59.927 57.895 3.32 0.00 0.00 4.44
3315 10118 0.537371 CCTTGGCCTTGTCTCCGTTT 60.537 55.000 3.32 0.00 0.00 3.60
3316 10119 1.318576 CTTGGCCTTGTCTCCGTTTT 58.681 50.000 3.32 0.00 0.00 2.43
3317 10120 2.500229 CTTGGCCTTGTCTCCGTTTTA 58.500 47.619 3.32 0.00 0.00 1.52
3318 10121 2.871096 TGGCCTTGTCTCCGTTTTAT 57.129 45.000 3.32 0.00 0.00 1.40
3319 10122 2.706890 TGGCCTTGTCTCCGTTTTATC 58.293 47.619 3.32 0.00 0.00 1.75
3320 10123 2.039216 TGGCCTTGTCTCCGTTTTATCA 59.961 45.455 3.32 0.00 0.00 2.15
3321 10124 3.078837 GGCCTTGTCTCCGTTTTATCAA 58.921 45.455 0.00 0.00 0.00 2.57
3322 10125 3.504520 GGCCTTGTCTCCGTTTTATCAAA 59.495 43.478 0.00 0.00 0.00 2.69
3323 10126 4.157840 GGCCTTGTCTCCGTTTTATCAAAT 59.842 41.667 0.00 0.00 0.00 2.32
3324 10127 5.355910 GGCCTTGTCTCCGTTTTATCAAATA 59.644 40.000 0.00 0.00 0.00 1.40
3325 10128 6.127842 GGCCTTGTCTCCGTTTTATCAAATAA 60.128 38.462 0.00 0.00 0.00 1.40
3326 10129 7.309920 GCCTTGTCTCCGTTTTATCAAATAAA 58.690 34.615 0.00 0.00 33.20 1.40
3327 10130 7.810759 GCCTTGTCTCCGTTTTATCAAATAAAA 59.189 33.333 1.69 1.69 41.11 1.52
3328 10131 9.685828 CCTTGTCTCCGTTTTATCAAATAAAAA 57.314 29.630 6.47 0.00 43.85 1.94
3369 10172 8.338259 AGTCTTTTCATCAATATATGTCGTTGC 58.662 33.333 0.00 0.00 0.00 4.17
3370 10173 7.587757 GTCTTTTCATCAATATATGTCGTTGCC 59.412 37.037 0.00 0.00 0.00 4.52
3371 10174 7.498900 TCTTTTCATCAATATATGTCGTTGCCT 59.501 33.333 0.00 0.00 0.00 4.75
3372 10175 6.785488 TTCATCAATATATGTCGTTGCCTC 57.215 37.500 0.00 0.00 0.00 4.70
3373 10176 5.237815 TCATCAATATATGTCGTTGCCTCC 58.762 41.667 0.00 0.00 0.00 4.30
3374 10177 4.002906 TCAATATATGTCGTTGCCTCCC 57.997 45.455 0.00 0.00 0.00 4.30
3375 10178 3.646162 TCAATATATGTCGTTGCCTCCCT 59.354 43.478 0.00 0.00 0.00 4.20
3376 10179 4.102524 TCAATATATGTCGTTGCCTCCCTT 59.897 41.667 0.00 0.00 0.00 3.95
3377 10180 4.706842 ATATATGTCGTTGCCTCCCTTT 57.293 40.909 0.00 0.00 0.00 3.11
3378 10181 2.396590 TATGTCGTTGCCTCCCTTTC 57.603 50.000 0.00 0.00 0.00 2.62
3379 10182 0.673644 ATGTCGTTGCCTCCCTTTCG 60.674 55.000 0.00 0.00 0.00 3.46
3380 10183 2.033194 GTCGTTGCCTCCCTTTCGG 61.033 63.158 0.00 0.00 0.00 4.30
3381 10184 2.032071 CGTTGCCTCCCTTTCGGT 59.968 61.111 0.00 0.00 0.00 4.69
3382 10185 2.325082 CGTTGCCTCCCTTTCGGTG 61.325 63.158 0.00 0.00 0.00 4.94
3383 10186 2.282180 TTGCCTCCCTTTCGGTGC 60.282 61.111 0.00 0.00 0.00 5.01
3384 10187 3.126703 TTGCCTCCCTTTCGGTGCA 62.127 57.895 0.00 0.00 38.26 4.57
3385 10188 2.747855 GCCTCCCTTTCGGTGCAG 60.748 66.667 0.00 0.00 32.70 4.41
3386 10189 2.045926 CCTCCCTTTCGGTGCAGG 60.046 66.667 0.00 0.00 0.00 4.85
3387 10190 2.592993 CCTCCCTTTCGGTGCAGGA 61.593 63.158 0.00 0.00 30.81 3.86
3388 10191 1.374947 CTCCCTTTCGGTGCAGGAA 59.625 57.895 0.00 0.00 30.81 3.36
3389 10192 0.674895 CTCCCTTTCGGTGCAGGAAG 60.675 60.000 0.00 0.00 30.81 3.46
3390 10193 2.335712 CCCTTTCGGTGCAGGAAGC 61.336 63.158 0.00 0.00 45.96 3.86
3401 10204 1.889545 GCAGGAAGCATGACCCTATC 58.110 55.000 0.00 0.00 44.79 2.08
3402 10205 1.544314 GCAGGAAGCATGACCCTATCC 60.544 57.143 0.00 0.00 44.79 2.59
3403 10206 1.770658 CAGGAAGCATGACCCTATCCA 59.229 52.381 0.00 0.00 0.00 3.41
3404 10207 2.374504 CAGGAAGCATGACCCTATCCAT 59.625 50.000 0.00 0.00 0.00 3.41
3405 10208 3.059097 AGGAAGCATGACCCTATCCATT 58.941 45.455 0.00 0.00 0.00 3.16
3406 10209 3.073650 AGGAAGCATGACCCTATCCATTC 59.926 47.826 0.00 0.00 0.00 2.67
3407 10210 2.847327 AGCATGACCCTATCCATTCG 57.153 50.000 0.00 0.00 0.00 3.34
3408 10211 1.160137 GCATGACCCTATCCATTCGC 58.840 55.000 0.00 0.00 0.00 4.70
3409 10212 1.543208 GCATGACCCTATCCATTCGCA 60.543 52.381 0.00 0.00 0.00 5.10
3410 10213 2.146342 CATGACCCTATCCATTCGCAC 58.854 52.381 0.00 0.00 0.00 5.34
3411 10214 1.496060 TGACCCTATCCATTCGCACT 58.504 50.000 0.00 0.00 0.00 4.40
3412 10215 1.412710 TGACCCTATCCATTCGCACTC 59.587 52.381 0.00 0.00 0.00 3.51
3413 10216 1.412710 GACCCTATCCATTCGCACTCA 59.587 52.381 0.00 0.00 0.00 3.41
3414 10217 2.037772 GACCCTATCCATTCGCACTCAT 59.962 50.000 0.00 0.00 0.00 2.90
3415 10218 2.439507 ACCCTATCCATTCGCACTCATT 59.560 45.455 0.00 0.00 0.00 2.57
3416 10219 3.117888 ACCCTATCCATTCGCACTCATTT 60.118 43.478 0.00 0.00 0.00 2.32
3417 10220 3.885297 CCCTATCCATTCGCACTCATTTT 59.115 43.478 0.00 0.00 0.00 1.82
3418 10221 4.023707 CCCTATCCATTCGCACTCATTTTC 60.024 45.833 0.00 0.00 0.00 2.29
3419 10222 4.818546 CCTATCCATTCGCACTCATTTTCT 59.181 41.667 0.00 0.00 0.00 2.52
3420 10223 5.297776 CCTATCCATTCGCACTCATTTTCTT 59.702 40.000 0.00 0.00 0.00 2.52
3421 10224 6.483307 CCTATCCATTCGCACTCATTTTCTTA 59.517 38.462 0.00 0.00 0.00 2.10
3422 10225 6.757897 ATCCATTCGCACTCATTTTCTTAA 57.242 33.333 0.00 0.00 0.00 1.85
3423 10226 6.567687 TCCATTCGCACTCATTTTCTTAAA 57.432 33.333 0.00 0.00 0.00 1.52
3424 10227 6.976088 TCCATTCGCACTCATTTTCTTAAAA 58.024 32.000 0.00 0.00 34.41 1.52
3425 10228 7.601856 TCCATTCGCACTCATTTTCTTAAAAT 58.398 30.769 0.00 0.00 41.57 1.82
3426 10229 8.735315 TCCATTCGCACTCATTTTCTTAAAATA 58.265 29.630 0.00 0.00 38.97 1.40
3427 10230 9.352784 CCATTCGCACTCATTTTCTTAAAATAA 57.647 29.630 0.00 0.00 38.97 1.40
3431 10234 9.405587 TCGCACTCATTTTCTTAAAATAAAAGG 57.594 29.630 0.00 0.00 38.97 3.11
3432 10235 8.647226 CGCACTCATTTTCTTAAAATAAAAGGG 58.353 33.333 0.00 0.25 38.97 3.95
3433 10236 8.443160 GCACTCATTTTCTTAAAATAAAAGGGC 58.557 33.333 10.31 10.31 38.97 5.19
3434 10237 9.487790 CACTCATTTTCTTAAAATAAAAGGGCA 57.512 29.630 0.00 0.00 38.97 5.36
3435 10238 9.489084 ACTCATTTTCTTAAAATAAAAGGGCAC 57.511 29.630 0.00 0.00 38.97 5.01
3436 10239 9.710900 CTCATTTTCTTAAAATAAAAGGGCACT 57.289 29.630 0.00 0.00 38.97 4.40
3447 10250 6.959639 ATAAAAGGGCACTATATGTTGTGG 57.040 37.500 6.22 0.00 34.99 4.17
3448 10251 4.316025 AAAGGGCACTATATGTTGTGGT 57.684 40.909 6.22 0.00 34.99 4.16
3449 10252 3.281727 AGGGCACTATATGTTGTGGTG 57.718 47.619 6.22 0.00 34.99 4.17
3450 10253 2.092429 AGGGCACTATATGTTGTGGTGG 60.092 50.000 6.22 0.00 34.99 4.61
3451 10254 2.356741 GGGCACTATATGTTGTGGTGGT 60.357 50.000 6.22 0.00 34.99 4.16
3452 10255 2.943033 GGCACTATATGTTGTGGTGGTC 59.057 50.000 6.22 0.00 34.99 4.02
3453 10256 3.370527 GGCACTATATGTTGTGGTGGTCT 60.371 47.826 6.22 0.00 34.99 3.85
3454 10257 3.871594 GCACTATATGTTGTGGTGGTCTC 59.128 47.826 6.22 0.00 34.99 3.36
3455 10258 4.622933 GCACTATATGTTGTGGTGGTCTCA 60.623 45.833 6.22 0.00 34.99 3.27
3456 10259 4.870426 CACTATATGTTGTGGTGGTCTCAC 59.130 45.833 0.00 0.00 42.91 3.51
3457 10260 2.448926 TATGTTGTGGTGGTCTCACG 57.551 50.000 0.00 0.00 44.50 4.35
3458 10261 0.756294 ATGTTGTGGTGGTCTCACGA 59.244 50.000 0.00 0.00 44.50 4.35
3459 10262 0.104120 TGTTGTGGTGGTCTCACGAG 59.896 55.000 0.00 0.00 44.50 4.18
3460 10263 1.069090 TTGTGGTGGTCTCACGAGC 59.931 57.895 0.00 0.00 44.50 5.03
3461 10264 2.048127 GTGGTGGTCTCACGAGCC 60.048 66.667 0.00 0.00 44.50 4.70
3462 10265 3.311110 TGGTGGTCTCACGAGCCC 61.311 66.667 0.00 0.00 44.50 5.19
3463 10266 2.997897 GGTGGTCTCACGAGCCCT 60.998 66.667 0.00 0.00 44.50 5.19
3464 10267 1.681327 GGTGGTCTCACGAGCCCTA 60.681 63.158 0.00 0.00 44.50 3.53
3465 10268 1.043673 GGTGGTCTCACGAGCCCTAT 61.044 60.000 0.00 0.00 44.50 2.57
3466 10269 0.386113 GTGGTCTCACGAGCCCTATC 59.614 60.000 0.00 0.00 36.84 2.08
3467 10270 0.259065 TGGTCTCACGAGCCCTATCT 59.741 55.000 0.00 0.00 36.84 1.98
3468 10271 1.342076 TGGTCTCACGAGCCCTATCTT 60.342 52.381 0.00 0.00 36.84 2.40
3469 10272 1.338655 GGTCTCACGAGCCCTATCTTC 59.661 57.143 0.00 0.00 0.00 2.87
3470 10273 2.303175 GTCTCACGAGCCCTATCTTCT 58.697 52.381 0.00 0.00 0.00 2.85
3471 10274 2.292292 GTCTCACGAGCCCTATCTTCTC 59.708 54.545 0.00 0.00 0.00 2.87
3472 10275 2.173782 TCTCACGAGCCCTATCTTCTCT 59.826 50.000 0.00 0.00 0.00 3.10
3473 10276 2.293122 CTCACGAGCCCTATCTTCTCTG 59.707 54.545 0.00 0.00 0.00 3.35
3474 10277 2.092375 TCACGAGCCCTATCTTCTCTGA 60.092 50.000 0.00 0.00 0.00 3.27
3475 10278 2.034053 CACGAGCCCTATCTTCTCTGAC 59.966 54.545 0.00 0.00 0.00 3.51
3476 10279 1.611491 CGAGCCCTATCTTCTCTGACC 59.389 57.143 0.00 0.00 0.00 4.02
3477 10280 2.672098 GAGCCCTATCTTCTCTGACCA 58.328 52.381 0.00 0.00 0.00 4.02
3478 10281 3.238597 GAGCCCTATCTTCTCTGACCAT 58.761 50.000 0.00 0.00 0.00 3.55
3479 10282 2.971330 AGCCCTATCTTCTCTGACCATG 59.029 50.000 0.00 0.00 0.00 3.66
3480 10283 2.968574 GCCCTATCTTCTCTGACCATGA 59.031 50.000 0.00 0.00 0.00 3.07
3481 10284 3.244044 GCCCTATCTTCTCTGACCATGAC 60.244 52.174 0.00 0.00 0.00 3.06
3482 10285 3.963374 CCCTATCTTCTCTGACCATGACA 59.037 47.826 0.00 0.00 0.00 3.58
3483 10286 4.592351 CCCTATCTTCTCTGACCATGACAT 59.408 45.833 0.00 0.00 0.00 3.06
3484 10287 5.777223 CCCTATCTTCTCTGACCATGACATA 59.223 44.000 0.00 0.00 0.00 2.29
3485 10288 6.268617 CCCTATCTTCTCTGACCATGACATAA 59.731 42.308 0.00 0.00 0.00 1.90
3486 10289 7.151308 CCTATCTTCTCTGACCATGACATAAC 58.849 42.308 0.00 0.00 0.00 1.89
3487 10290 6.550938 ATCTTCTCTGACCATGACATAACA 57.449 37.500 0.00 0.00 0.00 2.41
3488 10291 5.724328 TCTTCTCTGACCATGACATAACAC 58.276 41.667 0.00 0.00 0.00 3.32
3489 10292 5.481824 TCTTCTCTGACCATGACATAACACT 59.518 40.000 0.00 0.00 0.00 3.55
3490 10293 5.077134 TCTCTGACCATGACATAACACTG 57.923 43.478 0.00 0.00 0.00 3.66
3491 10294 3.599343 TCTGACCATGACATAACACTGC 58.401 45.455 0.00 0.00 0.00 4.40
3492 10295 2.679837 CTGACCATGACATAACACTGCC 59.320 50.000 0.00 0.00 0.00 4.85
3493 10296 2.017049 GACCATGACATAACACTGCCC 58.983 52.381 0.00 0.00 0.00 5.36
3494 10297 1.635487 ACCATGACATAACACTGCCCT 59.365 47.619 0.00 0.00 0.00 5.19
3495 10298 2.041620 ACCATGACATAACACTGCCCTT 59.958 45.455 0.00 0.00 0.00 3.95
3496 10299 3.265737 ACCATGACATAACACTGCCCTTA 59.734 43.478 0.00 0.00 0.00 2.69
3497 10300 4.263727 ACCATGACATAACACTGCCCTTAA 60.264 41.667 0.00 0.00 0.00 1.85
3498 10301 4.336433 CCATGACATAACACTGCCCTTAAG 59.664 45.833 0.00 0.00 0.00 1.85
3499 10302 3.343617 TGACATAACACTGCCCTTAAGC 58.656 45.455 0.00 0.00 0.00 3.09
3500 10303 3.009033 TGACATAACACTGCCCTTAAGCT 59.991 43.478 0.00 0.00 0.00 3.74
3501 10304 4.010349 GACATAACACTGCCCTTAAGCTT 58.990 43.478 3.48 3.48 0.00 3.74
3502 10305 3.758554 ACATAACACTGCCCTTAAGCTTG 59.241 43.478 9.86 0.00 0.00 4.01
3503 10306 2.364972 AACACTGCCCTTAAGCTTGT 57.635 45.000 9.86 0.00 32.98 3.16
3504 10307 1.609208 ACACTGCCCTTAAGCTTGTG 58.391 50.000 9.86 9.19 40.82 3.33
3505 10308 1.133792 ACACTGCCCTTAAGCTTGTGT 60.134 47.619 9.86 9.87 42.09 3.72
3506 10309 2.105821 ACACTGCCCTTAAGCTTGTGTA 59.894 45.455 9.86 0.00 43.65 2.90
3507 10310 3.146066 CACTGCCCTTAAGCTTGTGTAA 58.854 45.455 9.86 0.00 35.10 2.41
3508 10311 3.189287 CACTGCCCTTAAGCTTGTGTAAG 59.811 47.826 9.86 4.39 35.10 2.34
3509 10312 2.749621 CTGCCCTTAAGCTTGTGTAAGG 59.250 50.000 15.99 15.99 44.10 2.69
3510 10313 2.373836 TGCCCTTAAGCTTGTGTAAGGA 59.626 45.455 22.19 5.45 46.38 3.36
3511 10314 3.010138 TGCCCTTAAGCTTGTGTAAGGAT 59.990 43.478 22.19 0.00 46.38 3.24
3512 10315 3.378427 GCCCTTAAGCTTGTGTAAGGATG 59.622 47.826 22.19 10.92 46.38 3.51
3513 10316 4.843728 CCCTTAAGCTTGTGTAAGGATGA 58.156 43.478 22.19 0.00 46.38 2.92
3514 10317 5.440610 CCCTTAAGCTTGTGTAAGGATGAT 58.559 41.667 22.19 0.00 46.38 2.45
3515 10318 5.297776 CCCTTAAGCTTGTGTAAGGATGATG 59.702 44.000 22.19 6.09 46.38 3.07
3516 10319 6.115446 CCTTAAGCTTGTGTAAGGATGATGA 58.885 40.000 17.48 0.00 46.38 2.92
3517 10320 6.037610 CCTTAAGCTTGTGTAAGGATGATGAC 59.962 42.308 17.48 0.00 46.38 3.06
3518 10321 4.833478 AGCTTGTGTAAGGATGATGACT 57.167 40.909 0.00 0.00 34.40 3.41
3519 10322 5.171339 AGCTTGTGTAAGGATGATGACTT 57.829 39.130 0.00 0.00 34.40 3.01
3520 10323 4.940046 AGCTTGTGTAAGGATGATGACTTG 59.060 41.667 0.00 0.00 34.40 3.16
3521 10324 4.437930 GCTTGTGTAAGGATGATGACTTGC 60.438 45.833 0.00 0.00 34.40 4.01
3522 10325 4.558226 TGTGTAAGGATGATGACTTGCT 57.442 40.909 0.00 0.00 31.71 3.91
3523 10326 4.256110 TGTGTAAGGATGATGACTTGCTG 58.744 43.478 0.00 0.00 31.71 4.41
3524 10327 4.020307 TGTGTAAGGATGATGACTTGCTGA 60.020 41.667 0.00 0.00 31.71 4.26
3525 10328 5.121811 GTGTAAGGATGATGACTTGCTGAT 58.878 41.667 0.00 0.00 31.71 2.90
3526 10329 5.007430 GTGTAAGGATGATGACTTGCTGATG 59.993 44.000 0.00 0.00 31.71 3.07
3527 10330 2.573369 AGGATGATGACTTGCTGATGC 58.427 47.619 0.00 0.00 40.20 3.91
3528 10331 1.607628 GGATGATGACTTGCTGATGCC 59.392 52.381 0.00 0.00 38.71 4.40
3529 10332 2.294979 GATGATGACTTGCTGATGCCA 58.705 47.619 0.00 0.00 38.71 4.92
3530 10333 2.430248 TGATGACTTGCTGATGCCAT 57.570 45.000 0.00 0.00 38.71 4.40
3531 10334 2.730382 TGATGACTTGCTGATGCCATT 58.270 42.857 0.00 0.00 38.71 3.16
3532 10335 3.093814 TGATGACTTGCTGATGCCATTT 58.906 40.909 0.00 0.00 38.71 2.32
3533 10336 3.512329 TGATGACTTGCTGATGCCATTTT 59.488 39.130 0.00 0.00 38.71 1.82
3534 10337 3.306917 TGACTTGCTGATGCCATTTTG 57.693 42.857 0.00 0.00 38.71 2.44
3535 10338 2.629137 TGACTTGCTGATGCCATTTTGT 59.371 40.909 0.00 0.00 38.71 2.83
3536 10339 3.069872 TGACTTGCTGATGCCATTTTGTT 59.930 39.130 0.00 0.00 38.71 2.83
3537 10340 4.060205 GACTTGCTGATGCCATTTTGTTT 58.940 39.130 0.00 0.00 38.71 2.83
3538 10341 5.212532 ACTTGCTGATGCCATTTTGTTTA 57.787 34.783 0.00 0.00 38.71 2.01
3539 10342 4.990426 ACTTGCTGATGCCATTTTGTTTAC 59.010 37.500 0.00 0.00 38.71 2.01
3540 10343 3.924144 TGCTGATGCCATTTTGTTTACC 58.076 40.909 0.00 0.00 38.71 2.85
3541 10344 2.923020 GCTGATGCCATTTTGTTTACCG 59.077 45.455 0.00 0.00 0.00 4.02
3542 10345 3.510719 CTGATGCCATTTTGTTTACCGG 58.489 45.455 0.00 0.00 0.00 5.28
3543 10346 2.267426 GATGCCATTTTGTTTACCGGC 58.733 47.619 0.00 0.00 40.02 6.13
3544 10347 1.333177 TGCCATTTTGTTTACCGGCT 58.667 45.000 0.00 0.00 40.27 5.52
3545 10348 2.515854 TGCCATTTTGTTTACCGGCTA 58.484 42.857 0.00 0.00 40.27 3.93
3546 10349 2.891580 TGCCATTTTGTTTACCGGCTAA 59.108 40.909 0.00 0.00 40.27 3.09
3547 10350 3.321111 TGCCATTTTGTTTACCGGCTAAA 59.679 39.130 0.00 3.08 40.27 1.85
3548 10351 3.676172 GCCATTTTGTTTACCGGCTAAAC 59.324 43.478 22.34 22.34 43.27 2.01
3549 10352 3.915569 CCATTTTGTTTACCGGCTAAACG 59.084 43.478 22.95 14.19 45.15 3.60
3557 10360 3.098555 CGGCTAAACGGCATGGAC 58.901 61.111 0.00 0.00 38.27 4.02
3558 10361 1.449601 CGGCTAAACGGCATGGACT 60.450 57.895 0.00 0.00 38.27 3.85
3559 10362 1.705337 CGGCTAAACGGCATGGACTG 61.705 60.000 0.00 0.00 38.27 3.51
3560 10363 0.676782 GGCTAAACGGCATGGACTGT 60.677 55.000 0.00 0.00 38.25 3.55
3561 10364 1.165270 GCTAAACGGCATGGACTGTT 58.835 50.000 0.00 0.00 40.90 3.16
3562 10365 1.135689 GCTAAACGGCATGGACTGTTG 60.136 52.381 0.00 0.00 39.10 3.33
3563 10366 0.878416 TAAACGGCATGGACTGTTGC 59.122 50.000 0.00 0.00 39.10 4.17
3567 10370 3.762293 GCATGGACTGTTGCCACA 58.238 55.556 0.00 0.00 38.44 4.17
3568 10371 2.040330 GCATGGACTGTTGCCACAA 58.960 52.632 0.00 0.00 38.44 3.33
3569 10372 0.388659 GCATGGACTGTTGCCACAAA 59.611 50.000 0.00 0.00 38.44 2.83
3570 10373 1.001181 GCATGGACTGTTGCCACAAAT 59.999 47.619 0.00 0.00 38.44 2.32
3571 10374 2.548493 GCATGGACTGTTGCCACAAATT 60.548 45.455 0.00 0.00 38.44 1.82
3572 10375 3.731089 CATGGACTGTTGCCACAAATTT 58.269 40.909 0.00 0.00 38.44 1.82
3573 10376 3.902881 TGGACTGTTGCCACAAATTTT 57.097 38.095 0.00 0.00 30.36 1.82
3574 10377 3.791245 TGGACTGTTGCCACAAATTTTC 58.209 40.909 0.00 0.00 30.36 2.29
3575 10378 3.450457 TGGACTGTTGCCACAAATTTTCT 59.550 39.130 0.00 0.00 30.36 2.52
3576 10379 4.646945 TGGACTGTTGCCACAAATTTTCTA 59.353 37.500 0.00 0.00 30.36 2.10
3577 10380 5.127845 TGGACTGTTGCCACAAATTTTCTAA 59.872 36.000 0.00 0.00 30.36 2.10
3578 10381 5.462068 GGACTGTTGCCACAAATTTTCTAAC 59.538 40.000 0.00 0.00 30.36 2.34
3579 10382 5.971763 ACTGTTGCCACAAATTTTCTAACA 58.028 33.333 0.00 0.00 30.36 2.41
3580 10383 6.581712 ACTGTTGCCACAAATTTTCTAACAT 58.418 32.000 0.00 0.00 30.36 2.71
3581 10384 6.479660 ACTGTTGCCACAAATTTTCTAACATG 59.520 34.615 0.00 0.00 30.36 3.21
3582 10385 6.577103 TGTTGCCACAAATTTTCTAACATGA 58.423 32.000 0.00 0.00 0.00 3.07
3583 10386 6.700960 TGTTGCCACAAATTTTCTAACATGAG 59.299 34.615 0.00 0.00 0.00 2.90
3584 10387 5.229423 TGCCACAAATTTTCTAACATGAGC 58.771 37.500 0.00 0.00 0.00 4.26
3585 10388 5.221402 TGCCACAAATTTTCTAACATGAGCA 60.221 36.000 0.00 0.00 0.00 4.26
3586 10389 5.695816 GCCACAAATTTTCTAACATGAGCAA 59.304 36.000 0.00 0.00 0.00 3.91
3587 10390 6.202570 GCCACAAATTTTCTAACATGAGCAAA 59.797 34.615 0.00 0.00 0.00 3.68
3588 10391 7.095102 GCCACAAATTTTCTAACATGAGCAAAT 60.095 33.333 0.00 0.00 0.00 2.32
3589 10392 9.421806 CCACAAATTTTCTAACATGAGCAAATA 57.578 29.630 0.00 0.00 0.00 1.40
3597 10400 8.846943 TTCTAACATGAGCAAATACTCTTTCA 57.153 30.769 0.00 0.00 37.58 2.69
3598 10401 8.484641 TCTAACATGAGCAAATACTCTTTCAG 57.515 34.615 0.00 0.00 37.58 3.02
3599 10402 8.097038 TCTAACATGAGCAAATACTCTTTCAGT 58.903 33.333 0.00 0.00 37.58 3.41
3600 10403 6.734104 ACATGAGCAAATACTCTTTCAGTC 57.266 37.500 0.00 0.00 37.58 3.51
3601 10404 6.233434 ACATGAGCAAATACTCTTTCAGTCA 58.767 36.000 0.00 0.00 37.58 3.41
3602 10405 6.883217 ACATGAGCAAATACTCTTTCAGTCAT 59.117 34.615 0.00 0.00 37.58 3.06
3603 10406 7.392673 ACATGAGCAAATACTCTTTCAGTCATT 59.607 33.333 0.00 0.00 37.58 2.57
3604 10407 7.750229 TGAGCAAATACTCTTTCAGTCATTT 57.250 32.000 0.00 0.00 37.58 2.32
3605 10408 8.169977 TGAGCAAATACTCTTTCAGTCATTTT 57.830 30.769 0.00 0.00 37.58 1.82
3606 10409 8.632679 TGAGCAAATACTCTTTCAGTCATTTTT 58.367 29.630 0.00 0.00 37.58 1.94
3627 10430 6.771188 TTTTCTTTTGAACAAAAACTCGCA 57.229 29.167 12.61 0.00 39.49 5.10
3628 10431 6.388259 TTTCTTTTGAACAAAAACTCGCAG 57.612 33.333 12.61 1.67 39.49 5.18
3629 10432 5.303747 TCTTTTGAACAAAAACTCGCAGA 57.696 34.783 12.61 3.67 39.49 4.26
3630 10433 5.704888 TCTTTTGAACAAAAACTCGCAGAA 58.295 33.333 12.61 0.00 39.49 3.02
3631 10434 5.571357 TCTTTTGAACAAAAACTCGCAGAAC 59.429 36.000 12.61 0.00 39.49 3.01
3632 10435 4.427096 TTGAACAAAAACTCGCAGAACA 57.573 36.364 0.00 0.00 34.09 3.18
3633 10436 4.427096 TGAACAAAAACTCGCAGAACAA 57.573 36.364 0.00 0.00 34.09 2.83
3634 10437 4.799678 TGAACAAAAACTCGCAGAACAAA 58.200 34.783 0.00 0.00 34.09 2.83
3671 10474 7.155328 TCTTTCAGTCTCTATTCAGAAACCAC 58.845 38.462 0.00 0.00 0.00 4.16
3894 10728 2.555199 GACGAATGCTCAATAGTGGCT 58.445 47.619 0.00 0.00 0.00 4.75
4070 10904 6.130058 CGACTTTGACTTGTAGCTTTCTTTC 58.870 40.000 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 5.585390 AGCAGCACTATTGAAAATGTATGC 58.415 37.500 0.00 0.00 0.00 3.14
119 120 0.321298 TAAACCCAGACGGAAGCAGC 60.321 55.000 0.00 0.00 34.64 5.25
125 126 3.379372 CGAGACTAATAAACCCAGACGGA 59.621 47.826 0.00 0.00 34.64 4.69
126 127 3.379372 TCGAGACTAATAAACCCAGACGG 59.621 47.826 0.00 0.00 37.81 4.79
147 148 9.285770 GGTCAAACTTTAATCCAAAATACGATC 57.714 33.333 0.00 0.00 0.00 3.69
150 151 7.863375 TGTGGTCAAACTTTAATCCAAAATACG 59.137 33.333 0.00 0.00 0.00 3.06
323 328 2.022195 GTGCTACTACATCCGTCCTGA 58.978 52.381 0.00 0.00 0.00 3.86
408 416 6.772716 TGGCTTTTTACTTTCTCTTGATCTGT 59.227 34.615 0.00 0.00 0.00 3.41
480 488 8.040132 TCACTTCCATTGTTTTCACTTTTCAAT 58.960 29.630 0.00 0.00 0.00 2.57
483 491 7.826260 TTCACTTCCATTGTTTTCACTTTTC 57.174 32.000 0.00 0.00 0.00 2.29
484 492 8.614469 TTTTCACTTCCATTGTTTTCACTTTT 57.386 26.923 0.00 0.00 0.00 2.27
514 523 1.005805 TGTAGGGTTGCATTGCCAGAT 59.994 47.619 6.12 0.00 0.00 2.90
515 524 0.403655 TGTAGGGTTGCATTGCCAGA 59.596 50.000 6.12 0.00 0.00 3.86
516 525 1.203052 CTTGTAGGGTTGCATTGCCAG 59.797 52.381 6.12 0.00 0.00 4.85
541 550 0.172803 CATTTGCTGCTCTTGGCTCC 59.827 55.000 0.00 0.00 42.39 4.70
548 557 0.964358 GTGAGGCCATTTGCTGCTCT 60.964 55.000 5.01 0.00 40.92 4.09
571 580 2.606751 ATATGGGGCTAGCTACGAGT 57.393 50.000 15.72 0.00 0.00 4.18
603 612 0.381801 CACGGCAATTACTGGGCATC 59.618 55.000 0.00 0.00 0.00 3.91
606 615 0.958382 TCACACGGCAATTACTGGGC 60.958 55.000 0.00 0.00 0.00 5.36
617 626 3.030652 CTGTTTGGGTCACACGGC 58.969 61.111 0.00 0.00 0.00 5.68
638 650 2.183504 TTCTTGGTGAGCGCGCAAA 61.184 52.632 35.10 18.50 0.00 3.68
697 711 9.370126 CGACAATTATTTCGGAATTAGAACATC 57.630 33.333 0.00 0.00 0.00 3.06
698 712 7.855904 GCGACAATTATTTCGGAATTAGAACAT 59.144 33.333 0.00 0.00 35.73 2.71
699 713 7.065324 AGCGACAATTATTTCGGAATTAGAACA 59.935 33.333 0.00 0.00 35.73 3.18
700 714 7.373441 CAGCGACAATTATTTCGGAATTAGAAC 59.627 37.037 0.00 0.00 35.73 3.01
701 715 7.406553 CAGCGACAATTATTTCGGAATTAGAA 58.593 34.615 0.00 0.00 35.73 2.10
702 716 6.018262 CCAGCGACAATTATTTCGGAATTAGA 60.018 38.462 0.00 0.00 35.73 2.10
703 717 6.136071 CCAGCGACAATTATTTCGGAATTAG 58.864 40.000 0.00 0.00 35.73 1.73
704 718 5.504994 GCCAGCGACAATTATTTCGGAATTA 60.505 40.000 0.00 0.00 35.73 1.40
705 719 4.733523 GCCAGCGACAATTATTTCGGAATT 60.734 41.667 0.00 0.00 35.73 2.17
706 720 3.243068 GCCAGCGACAATTATTTCGGAAT 60.243 43.478 0.00 0.00 35.73 3.01
768 782 2.555006 GCGGGGGTAAAAAGGGAAACTA 60.555 50.000 0.00 0.00 0.00 2.24
770 784 0.604578 GCGGGGGTAAAAAGGGAAAC 59.395 55.000 0.00 0.00 0.00 2.78
900 928 2.765807 CGGGGAGAGATGGTGGCT 60.766 66.667 0.00 0.00 0.00 4.75
940 989 3.625897 TGGGGTGTGAGTGGAGCG 61.626 66.667 0.00 0.00 0.00 5.03
941 990 2.032681 GTGGGGTGTGAGTGGAGC 59.967 66.667 0.00 0.00 0.00 4.70
963 1034 1.251251 GTGCATCAAAGCTTGACCCT 58.749 50.000 0.00 0.00 43.48 4.34
964 1035 0.244721 GGTGCATCAAAGCTTGACCC 59.755 55.000 0.00 0.00 43.48 4.46
981 1102 2.729479 CGCCAGATCCAGAGCAGGT 61.729 63.158 0.00 0.00 0.00 4.00
1257 1378 1.207089 TCCTCCACCTGCATCTTTACG 59.793 52.381 0.00 0.00 0.00 3.18
1379 1534 1.336148 TGCTACTGCTTGCACAAATGC 60.336 47.619 0.00 0.00 45.59 3.56
1429 1584 4.339247 TGCTCCAAAAACAAGAAGAGAAGG 59.661 41.667 0.00 0.00 0.00 3.46
1444 1599 0.386476 CTGCTGTTGCTTGCTCCAAA 59.614 50.000 0.00 0.00 40.48 3.28
1457 1612 2.629656 GCACAAATCCGCCTGCTGT 61.630 57.895 0.00 0.00 0.00 4.40
1464 1619 2.076863 AGTCTACTTGCACAAATCCGC 58.923 47.619 0.00 0.00 0.00 5.54
1493 1648 4.383118 GCTAAACCTGTCTGCTCCAATCTA 60.383 45.833 0.00 0.00 0.00 1.98
1571 1726 2.168106 ACCTGTTTGTCTGCAATGCAAA 59.832 40.909 9.92 0.00 38.41 3.68
1662 1822 7.820578 TTTTAAAAGGATTTGAACCGGTCTA 57.179 32.000 8.04 0.00 39.02 2.59
1810 3069 2.308690 AGTACTCCGGCTACTGAATCC 58.691 52.381 10.06 0.00 0.00 3.01
1967 3250 6.149973 CCCATGTGTATAATTATGCCAGACAG 59.850 42.308 8.28 2.95 0.00 3.51
2030 3313 4.363999 CACACGCCCAAAATTAACTGAAA 58.636 39.130 0.00 0.00 0.00 2.69
2034 3317 1.960689 AGCACACGCCCAAAATTAACT 59.039 42.857 0.00 0.00 39.83 2.24
2035 3318 2.058057 CAGCACACGCCCAAAATTAAC 58.942 47.619 0.00 0.00 39.83 2.01
2036 3319 1.683917 ACAGCACACGCCCAAAATTAA 59.316 42.857 0.00 0.00 39.83 1.40
2040 3323 0.748367 TGTACAGCACACGCCCAAAA 60.748 50.000 0.00 0.00 39.83 2.44
2047 3330 1.464608 CCATTCCTTGTACAGCACACG 59.535 52.381 0.00 0.00 36.69 4.49
2053 3336 2.684881 GTCATGCCCATTCCTTGTACAG 59.315 50.000 0.00 0.00 0.00 2.74
2192 3475 9.810231 GGTTACATTCATAAAAATGCAAACTTG 57.190 29.630 0.00 0.00 39.72 3.16
2194 3477 8.987890 GTGGTTACATTCATAAAAATGCAAACT 58.012 29.630 0.00 0.00 39.72 2.66
2201 3484 9.528489 ACTACTGGTGGTTACATTCATAAAAAT 57.472 29.630 0.00 0.00 0.00 1.82
2202 3485 8.927675 ACTACTGGTGGTTACATTCATAAAAA 57.072 30.769 0.00 0.00 0.00 1.94
2204 3487 8.927675 AAACTACTGGTGGTTACATTCATAAA 57.072 30.769 3.10 0.00 32.98 1.40
2207 3490 9.528489 AATAAAACTACTGGTGGTTACATTCAT 57.472 29.630 3.10 0.00 32.98 2.57
2212 3495 8.732531 GCATAAATAAAACTACTGGTGGTTACA 58.267 33.333 3.10 0.00 32.98 2.41
2214 3497 8.865420 TGCATAAATAAAACTACTGGTGGTTA 57.135 30.769 3.10 0.00 32.98 2.85
2215 3498 7.768807 TGCATAAATAAAACTACTGGTGGTT 57.231 32.000 0.00 0.00 35.75 3.67
2216 3499 7.834181 AGATGCATAAATAAAACTACTGGTGGT 59.166 33.333 0.00 0.00 0.00 4.16
2218 3501 8.892723 TGAGATGCATAAATAAAACTACTGGTG 58.107 33.333 0.00 0.00 0.00 4.17
2219 3502 9.461312 TTGAGATGCATAAATAAAACTACTGGT 57.539 29.630 0.00 0.00 0.00 4.00
2231 3514 9.595823 CCAAGATTTCTTTTGAGATGCATAAAT 57.404 29.630 0.00 0.00 33.11 1.40
2232 3515 8.805175 TCCAAGATTTCTTTTGAGATGCATAAA 58.195 29.630 0.00 0.00 33.11 1.40
2233 3516 8.352137 TCCAAGATTTCTTTTGAGATGCATAA 57.648 30.769 0.00 0.00 33.11 1.90
2234 3517 7.943079 TCCAAGATTTCTTTTGAGATGCATA 57.057 32.000 0.00 0.00 33.11 3.14
2235 3518 6.845758 TCCAAGATTTCTTTTGAGATGCAT 57.154 33.333 0.00 0.00 33.11 3.96
2236 3519 6.845758 ATCCAAGATTTCTTTTGAGATGCA 57.154 33.333 0.00 0.00 33.11 3.96
2237 3520 7.381678 GCATATCCAAGATTTCTTTTGAGATGC 59.618 37.037 21.22 21.22 43.93 3.91
2238 3521 8.410912 TGCATATCCAAGATTTCTTTTGAGATG 58.589 33.333 14.21 14.21 37.16 2.90
2239 3522 8.529424 TGCATATCCAAGATTTCTTTTGAGAT 57.471 30.769 0.00 0.00 33.11 2.75
2240 3523 7.943079 TGCATATCCAAGATTTCTTTTGAGA 57.057 32.000 0.00 0.00 33.11 3.27
2241 3524 8.991243 TTTGCATATCCAAGATTTCTTTTGAG 57.009 30.769 0.00 0.00 33.11 3.02
2242 3525 9.947433 AATTTGCATATCCAAGATTTCTTTTGA 57.053 25.926 0.00 0.00 33.11 2.69
2243 3526 9.982291 CAATTTGCATATCCAAGATTTCTTTTG 57.018 29.630 0.00 0.00 33.11 2.44
2244 3527 9.729281 ACAATTTGCATATCCAAGATTTCTTTT 57.271 25.926 0.00 0.00 33.11 2.27
2245 3528 9.158233 CACAATTTGCATATCCAAGATTTCTTT 57.842 29.630 0.00 0.00 33.11 2.52
2246 3529 8.316214 ACACAATTTGCATATCCAAGATTTCTT 58.684 29.630 0.00 0.00 36.45 2.52
2247 3530 7.844009 ACACAATTTGCATATCCAAGATTTCT 58.156 30.769 0.00 0.00 0.00 2.52
2248 3531 7.977853 AGACACAATTTGCATATCCAAGATTTC 59.022 33.333 0.00 0.00 0.00 2.17
2249 3532 7.762615 CAGACACAATTTGCATATCCAAGATTT 59.237 33.333 0.00 0.00 0.00 2.17
2250 3533 7.262772 CAGACACAATTTGCATATCCAAGATT 58.737 34.615 0.00 0.00 0.00 2.40
2251 3534 6.183360 CCAGACACAATTTGCATATCCAAGAT 60.183 38.462 0.00 0.00 0.00 2.40
2252 3535 5.125900 CCAGACACAATTTGCATATCCAAGA 59.874 40.000 0.00 0.00 0.00 3.02
2253 3536 5.345702 CCAGACACAATTTGCATATCCAAG 58.654 41.667 0.00 0.00 0.00 3.61
2254 3537 4.381825 GCCAGACACAATTTGCATATCCAA 60.382 41.667 0.00 0.00 0.00 3.53
2255 3538 3.130869 GCCAGACACAATTTGCATATCCA 59.869 43.478 0.00 0.00 0.00 3.41
2256 3539 3.382546 AGCCAGACACAATTTGCATATCC 59.617 43.478 0.00 0.00 0.00 2.59
2257 3540 4.644103 AGCCAGACACAATTTGCATATC 57.356 40.909 0.00 0.00 0.00 1.63
2516 8391 9.167311 GATTGAACAGGAGTAGTATGAACAATT 57.833 33.333 0.00 0.00 0.00 2.32
2835 9571 2.124151 CCTTTCCCCATCGGCTGG 60.124 66.667 0.00 0.00 45.51 4.85
2920 9659 1.506025 GAGAGCCAGATCCCCTCTTT 58.494 55.000 8.31 0.00 36.16 2.52
2921 9660 0.758685 CGAGAGCCAGATCCCCTCTT 60.759 60.000 8.31 0.00 36.16 2.85
3026 9767 2.257676 GCTCGGGTCGTCGTCTTT 59.742 61.111 0.00 0.00 0.00 2.52
3053 9856 3.244044 TGAAATTACAAAACTGCCCCTGC 60.244 43.478 0.00 0.00 38.26 4.85
3055 9858 4.223144 AGTGAAATTACAAAACTGCCCCT 58.777 39.130 0.00 0.00 0.00 4.79
3102 9905 2.014128 CGAAATAATTGTCGCTGGGGT 58.986 47.619 0.00 0.00 0.00 4.95
3186 9989 9.855021 CCTCCGTTTCAAATTATAAGATGTTTT 57.145 29.630 0.00 0.00 0.00 2.43
3187 9990 8.466798 CCCTCCGTTTCAAATTATAAGATGTTT 58.533 33.333 0.00 0.00 0.00 2.83
3188 9991 7.832187 TCCCTCCGTTTCAAATTATAAGATGTT 59.168 33.333 0.00 0.00 0.00 2.71
3189 9992 7.343357 TCCCTCCGTTTCAAATTATAAGATGT 58.657 34.615 0.00 0.00 0.00 3.06
3190 9993 7.499232 ACTCCCTCCGTTTCAAATTATAAGATG 59.501 37.037 0.00 0.00 0.00 2.90
3191 9994 7.574607 ACTCCCTCCGTTTCAAATTATAAGAT 58.425 34.615 0.00 0.00 0.00 2.40
3192 9995 6.954232 ACTCCCTCCGTTTCAAATTATAAGA 58.046 36.000 0.00 0.00 0.00 2.10
3193 9996 8.904099 ATACTCCCTCCGTTTCAAATTATAAG 57.096 34.615 0.00 0.00 0.00 1.73
3195 9998 9.938280 CATATACTCCCTCCGTTTCAAATTATA 57.062 33.333 0.00 0.00 0.00 0.98
3196 9999 8.656806 TCATATACTCCCTCCGTTTCAAATTAT 58.343 33.333 0.00 0.00 0.00 1.28
3197 10000 8.025270 TCATATACTCCCTCCGTTTCAAATTA 57.975 34.615 0.00 0.00 0.00 1.40
3198 10001 6.895782 TCATATACTCCCTCCGTTTCAAATT 58.104 36.000 0.00 0.00 0.00 1.82
3199 10002 6.326583 TCTCATATACTCCCTCCGTTTCAAAT 59.673 38.462 0.00 0.00 0.00 2.32
3200 10003 5.659525 TCTCATATACTCCCTCCGTTTCAAA 59.340 40.000 0.00 0.00 0.00 2.69
3201 10004 5.205821 TCTCATATACTCCCTCCGTTTCAA 58.794 41.667 0.00 0.00 0.00 2.69
3202 10005 4.800023 TCTCATATACTCCCTCCGTTTCA 58.200 43.478 0.00 0.00 0.00 2.69
3203 10006 5.071370 TCTCTCATATACTCCCTCCGTTTC 58.929 45.833 0.00 0.00 0.00 2.78
3204 10007 5.063017 TCTCTCATATACTCCCTCCGTTT 57.937 43.478 0.00 0.00 0.00 3.60
3205 10008 4.726035 TCTCTCATATACTCCCTCCGTT 57.274 45.455 0.00 0.00 0.00 4.44
3206 10009 4.938575 ATCTCTCATATACTCCCTCCGT 57.061 45.455 0.00 0.00 0.00 4.69
3207 10010 7.889873 ATAAATCTCTCATATACTCCCTCCG 57.110 40.000 0.00 0.00 0.00 4.63
3210 10013 9.191479 CGGTTATAAATCTCTCATATACTCCCT 57.809 37.037 0.00 0.00 0.00 4.20
3211 10014 8.968969 ACGGTTATAAATCTCTCATATACTCCC 58.031 37.037 0.00 0.00 0.00 4.30
3212 10015 9.790389 CACGGTTATAAATCTCTCATATACTCC 57.210 37.037 0.00 0.00 0.00 3.85
3217 10020 7.815068 GCACTCACGGTTATAAATCTCTCATAT 59.185 37.037 0.00 0.00 0.00 1.78
3218 10021 7.145985 GCACTCACGGTTATAAATCTCTCATA 58.854 38.462 0.00 0.00 0.00 2.15
3219 10022 5.986135 GCACTCACGGTTATAAATCTCTCAT 59.014 40.000 0.00 0.00 0.00 2.90
3220 10023 5.105513 TGCACTCACGGTTATAAATCTCTCA 60.106 40.000 0.00 0.00 0.00 3.27
3221 10024 5.232414 GTGCACTCACGGTTATAAATCTCTC 59.768 44.000 10.32 0.00 32.98 3.20
3222 10025 5.109903 GTGCACTCACGGTTATAAATCTCT 58.890 41.667 10.32 0.00 32.98 3.10
3223 10026 5.391060 GTGCACTCACGGTTATAAATCTC 57.609 43.478 10.32 0.00 32.98 2.75
3243 10046 1.005294 GCAGTCCTTTTGCATGCGTG 61.005 55.000 14.09 0.09 41.17 5.34
3244 10047 1.286880 GCAGTCCTTTTGCATGCGT 59.713 52.632 14.09 0.00 41.17 5.24
3245 10048 1.286570 TGCAGTCCTTTTGCATGCG 59.713 52.632 14.09 0.00 45.89 4.73
3250 10053 2.357637 TGTGTTAGTGCAGTCCTTTTGC 59.642 45.455 0.00 0.00 41.86 3.68
3251 10054 3.876914 TCTGTGTTAGTGCAGTCCTTTTG 59.123 43.478 0.00 0.00 34.57 2.44
3252 10055 4.150897 TCTGTGTTAGTGCAGTCCTTTT 57.849 40.909 0.00 0.00 34.57 2.27
3253 10056 3.838244 TCTGTGTTAGTGCAGTCCTTT 57.162 42.857 0.00 0.00 34.57 3.11
3254 10057 3.324846 TGATCTGTGTTAGTGCAGTCCTT 59.675 43.478 0.00 0.00 34.57 3.36
3255 10058 2.899900 TGATCTGTGTTAGTGCAGTCCT 59.100 45.455 0.00 0.00 34.57 3.85
3256 10059 3.319137 TGATCTGTGTTAGTGCAGTCC 57.681 47.619 0.00 0.00 34.57 3.85
3257 10060 5.869753 AATTGATCTGTGTTAGTGCAGTC 57.130 39.130 0.00 0.00 34.57 3.51
3258 10061 6.936900 ACTTAATTGATCTGTGTTAGTGCAGT 59.063 34.615 0.00 0.00 34.57 4.40
3259 10062 7.369803 ACTTAATTGATCTGTGTTAGTGCAG 57.630 36.000 0.00 0.00 0.00 4.41
3260 10063 8.717821 GTTACTTAATTGATCTGTGTTAGTGCA 58.282 33.333 0.00 0.00 0.00 4.57
3261 10064 8.717821 TGTTACTTAATTGATCTGTGTTAGTGC 58.282 33.333 0.00 0.00 0.00 4.40
3263 10066 9.772973 TGTGTTACTTAATTGATCTGTGTTAGT 57.227 29.630 0.00 0.00 0.00 2.24
3276 10079 9.869757 GCCAAGGAATAATTGTGTTACTTAATT 57.130 29.630 0.00 0.00 28.50 1.40
3277 10080 8.474831 GGCCAAGGAATAATTGTGTTACTTAAT 58.525 33.333 0.00 0.00 28.50 1.40
3278 10081 7.672239 AGGCCAAGGAATAATTGTGTTACTTAA 59.328 33.333 5.01 0.00 28.50 1.85
3279 10082 7.179269 AGGCCAAGGAATAATTGTGTTACTTA 58.821 34.615 5.01 0.00 28.50 2.24
3280 10083 6.016555 AGGCCAAGGAATAATTGTGTTACTT 58.983 36.000 5.01 0.00 29.45 2.24
3281 10084 5.580022 AGGCCAAGGAATAATTGTGTTACT 58.420 37.500 5.01 0.00 0.00 2.24
3282 10085 5.914898 AGGCCAAGGAATAATTGTGTTAC 57.085 39.130 5.01 0.00 0.00 2.50
3283 10086 5.777732 ACAAGGCCAAGGAATAATTGTGTTA 59.222 36.000 5.01 0.00 0.00 2.41
3284 10087 4.592778 ACAAGGCCAAGGAATAATTGTGTT 59.407 37.500 5.01 0.00 0.00 3.32
3285 10088 4.159557 ACAAGGCCAAGGAATAATTGTGT 58.840 39.130 5.01 0.00 0.00 3.72
3286 10089 4.463891 AGACAAGGCCAAGGAATAATTGTG 59.536 41.667 5.01 0.00 30.10 3.33
3287 10090 4.677182 AGACAAGGCCAAGGAATAATTGT 58.323 39.130 5.01 2.72 32.46 2.71
3288 10091 4.098501 GGAGACAAGGCCAAGGAATAATTG 59.901 45.833 5.01 0.00 0.00 2.32
3289 10092 4.281657 GGAGACAAGGCCAAGGAATAATT 58.718 43.478 5.01 0.00 0.00 1.40
3290 10093 3.685550 CGGAGACAAGGCCAAGGAATAAT 60.686 47.826 5.01 0.00 0.00 1.28
3291 10094 2.355716 CGGAGACAAGGCCAAGGAATAA 60.356 50.000 5.01 0.00 0.00 1.40
3292 10095 1.209504 CGGAGACAAGGCCAAGGAATA 59.790 52.381 5.01 0.00 0.00 1.75
3293 10096 0.035056 CGGAGACAAGGCCAAGGAAT 60.035 55.000 5.01 0.00 0.00 3.01
3294 10097 1.374947 CGGAGACAAGGCCAAGGAA 59.625 57.895 5.01 0.00 0.00 3.36
3295 10098 1.415672 AACGGAGACAAGGCCAAGGA 61.416 55.000 5.01 0.00 0.00 3.36
3296 10099 0.537371 AAACGGAGACAAGGCCAAGG 60.537 55.000 5.01 0.00 0.00 3.61
3297 10100 1.318576 AAAACGGAGACAAGGCCAAG 58.681 50.000 5.01 0.00 0.00 3.61
3298 10101 2.642154 TAAAACGGAGACAAGGCCAA 57.358 45.000 5.01 0.00 0.00 4.52
3299 10102 2.039216 TGATAAAACGGAGACAAGGCCA 59.961 45.455 5.01 0.00 0.00 5.36
3300 10103 2.706890 TGATAAAACGGAGACAAGGCC 58.293 47.619 0.00 0.00 0.00 5.19
3301 10104 4.759516 TTTGATAAAACGGAGACAAGGC 57.240 40.909 0.00 0.00 0.00 4.35
3302 10105 9.685828 TTTTTATTTGATAAAACGGAGACAAGG 57.314 29.630 5.58 0.00 42.54 3.61
3343 10146 8.338259 GCAACGACATATATTGATGAAAAGACT 58.662 33.333 0.00 0.00 0.00 3.24
3344 10147 7.587757 GGCAACGACATATATTGATGAAAAGAC 59.412 37.037 0.00 0.00 0.00 3.01
3345 10148 7.498900 AGGCAACGACATATATTGATGAAAAGA 59.501 33.333 0.00 0.00 46.39 2.52
3346 10149 7.642669 AGGCAACGACATATATTGATGAAAAG 58.357 34.615 0.00 0.00 46.39 2.27
3347 10150 7.255104 GGAGGCAACGACATATATTGATGAAAA 60.255 37.037 0.00 0.00 46.39 2.29
3348 10151 6.204688 GGAGGCAACGACATATATTGATGAAA 59.795 38.462 0.00 0.00 46.39 2.69
3349 10152 5.700832 GGAGGCAACGACATATATTGATGAA 59.299 40.000 0.00 0.00 46.39 2.57
3350 10153 5.237815 GGAGGCAACGACATATATTGATGA 58.762 41.667 0.00 0.00 46.39 2.92
3351 10154 4.393062 GGGAGGCAACGACATATATTGATG 59.607 45.833 0.00 0.00 46.39 3.07
3352 10155 4.287067 AGGGAGGCAACGACATATATTGAT 59.713 41.667 0.00 0.00 46.39 2.57
3353 10156 3.646162 AGGGAGGCAACGACATATATTGA 59.354 43.478 0.00 0.00 46.39 2.57
3354 10157 4.008074 AGGGAGGCAACGACATATATTG 57.992 45.455 0.00 0.00 46.39 1.90
3355 10158 4.706842 AAGGGAGGCAACGACATATATT 57.293 40.909 0.00 0.00 46.39 1.28
3356 10159 4.642429 GAAAGGGAGGCAACGACATATAT 58.358 43.478 0.00 0.00 46.39 0.86
3357 10160 3.491964 CGAAAGGGAGGCAACGACATATA 60.492 47.826 0.00 0.00 46.39 0.86
3358 10161 2.741878 CGAAAGGGAGGCAACGACATAT 60.742 50.000 0.00 0.00 46.39 1.78
3359 10162 1.404986 CGAAAGGGAGGCAACGACATA 60.405 52.381 0.00 0.00 46.39 2.29
3360 10163 0.673644 CGAAAGGGAGGCAACGACAT 60.674 55.000 0.00 0.00 46.39 3.06
3361 10164 1.301401 CGAAAGGGAGGCAACGACA 60.301 57.895 0.00 0.00 46.39 4.35
3362 10165 3.562635 CGAAAGGGAGGCAACGAC 58.437 61.111 0.00 0.00 46.39 4.34
3382 10185 1.544314 GGATAGGGTCATGCTTCCTGC 60.544 57.143 10.33 4.31 43.25 4.85
3383 10186 1.770658 TGGATAGGGTCATGCTTCCTG 59.229 52.381 10.33 0.00 32.46 3.86
3384 10187 2.196742 TGGATAGGGTCATGCTTCCT 57.803 50.000 6.57 6.57 34.85 3.36
3385 10188 3.416156 GAATGGATAGGGTCATGCTTCC 58.584 50.000 0.00 0.00 0.00 3.46
3386 10189 3.070018 CGAATGGATAGGGTCATGCTTC 58.930 50.000 0.00 0.00 0.00 3.86
3387 10190 2.811873 GCGAATGGATAGGGTCATGCTT 60.812 50.000 0.00 0.00 0.00 3.91
3388 10191 1.271054 GCGAATGGATAGGGTCATGCT 60.271 52.381 0.00 0.00 0.00 3.79
3389 10192 1.160137 GCGAATGGATAGGGTCATGC 58.840 55.000 0.00 0.00 0.00 4.06
3390 10193 2.146342 GTGCGAATGGATAGGGTCATG 58.854 52.381 0.00 0.00 0.00 3.07
3391 10194 2.037772 GAGTGCGAATGGATAGGGTCAT 59.962 50.000 0.00 0.00 0.00 3.06
3392 10195 1.412710 GAGTGCGAATGGATAGGGTCA 59.587 52.381 0.00 0.00 0.00 4.02
3393 10196 1.412710 TGAGTGCGAATGGATAGGGTC 59.587 52.381 0.00 0.00 0.00 4.46
3394 10197 1.496060 TGAGTGCGAATGGATAGGGT 58.504 50.000 0.00 0.00 0.00 4.34
3395 10198 2.847327 ATGAGTGCGAATGGATAGGG 57.153 50.000 0.00 0.00 0.00 3.53
3396 10199 4.818546 AGAAAATGAGTGCGAATGGATAGG 59.181 41.667 0.00 0.00 0.00 2.57
3397 10200 5.998454 AGAAAATGAGTGCGAATGGATAG 57.002 39.130 0.00 0.00 0.00 2.08
3398 10201 7.857734 TTAAGAAAATGAGTGCGAATGGATA 57.142 32.000 0.00 0.00 0.00 2.59
3399 10202 6.757897 TTAAGAAAATGAGTGCGAATGGAT 57.242 33.333 0.00 0.00 0.00 3.41
3400 10203 6.567687 TTTAAGAAAATGAGTGCGAATGGA 57.432 33.333 0.00 0.00 0.00 3.41
3401 10204 7.816945 ATTTTAAGAAAATGAGTGCGAATGG 57.183 32.000 0.00 0.00 39.50 3.16
3405 10208 9.405587 CCTTTTATTTTAAGAAAATGAGTGCGA 57.594 29.630 7.30 0.00 41.01 5.10
3406 10209 8.647226 CCCTTTTATTTTAAGAAAATGAGTGCG 58.353 33.333 7.30 0.00 41.01 5.34
3407 10210 8.443160 GCCCTTTTATTTTAAGAAAATGAGTGC 58.557 33.333 7.30 3.24 41.01 4.40
3408 10211 9.487790 TGCCCTTTTATTTTAAGAAAATGAGTG 57.512 29.630 7.30 0.00 41.01 3.51
3409 10212 9.489084 GTGCCCTTTTATTTTAAGAAAATGAGT 57.511 29.630 7.30 0.00 41.01 3.41
3410 10213 9.710900 AGTGCCCTTTTATTTTAAGAAAATGAG 57.289 29.630 7.30 3.67 41.01 2.90
3421 10224 8.257306 CCACAACATATAGTGCCCTTTTATTTT 58.743 33.333 0.00 0.00 34.48 1.82
3422 10225 7.398904 ACCACAACATATAGTGCCCTTTTATTT 59.601 33.333 0.00 0.00 34.48 1.40
3423 10226 6.895204 ACCACAACATATAGTGCCCTTTTATT 59.105 34.615 0.00 0.00 34.48 1.40
3424 10227 6.321181 CACCACAACATATAGTGCCCTTTTAT 59.679 38.462 0.00 0.00 34.48 1.40
3425 10228 5.650266 CACCACAACATATAGTGCCCTTTTA 59.350 40.000 0.00 0.00 34.48 1.52
3426 10229 4.462483 CACCACAACATATAGTGCCCTTTT 59.538 41.667 0.00 0.00 34.48 2.27
3427 10230 4.016444 CACCACAACATATAGTGCCCTTT 58.984 43.478 0.00 0.00 34.48 3.11
3428 10231 3.620488 CACCACAACATATAGTGCCCTT 58.380 45.455 0.00 0.00 34.48 3.95
3429 10232 2.092429 CCACCACAACATATAGTGCCCT 60.092 50.000 0.00 0.00 34.48 5.19
3430 10233 2.297701 CCACCACAACATATAGTGCCC 58.702 52.381 0.00 0.00 34.48 5.36
3431 10234 2.943033 GACCACCACAACATATAGTGCC 59.057 50.000 0.00 0.00 34.48 5.01
3432 10235 3.871594 GAGACCACCACAACATATAGTGC 59.128 47.826 0.00 0.00 34.48 4.40
3433 10236 4.870426 GTGAGACCACCACAACATATAGTG 59.130 45.833 0.00 0.00 37.33 2.74
3434 10237 4.381612 CGTGAGACCACCACAACATATAGT 60.382 45.833 0.00 0.00 40.12 2.12
3435 10238 4.112634 CGTGAGACCACCACAACATATAG 58.887 47.826 0.00 0.00 40.12 1.31
3436 10239 3.764972 TCGTGAGACCACCACAACATATA 59.235 43.478 0.00 0.00 40.12 0.86
3437 10240 2.565391 TCGTGAGACCACCACAACATAT 59.435 45.455 0.00 0.00 40.12 1.78
3438 10241 1.964933 TCGTGAGACCACCACAACATA 59.035 47.619 0.00 0.00 40.12 2.29
3439 10242 0.756294 TCGTGAGACCACCACAACAT 59.244 50.000 0.00 0.00 40.12 2.71
3440 10243 0.104120 CTCGTGAGACCACCACAACA 59.896 55.000 0.00 0.00 40.12 3.33
3441 10244 1.222115 GCTCGTGAGACCACCACAAC 61.222 60.000 0.00 0.00 40.12 3.32
3442 10245 1.069090 GCTCGTGAGACCACCACAA 59.931 57.895 0.00 0.00 40.12 3.33
3443 10246 2.734591 GCTCGTGAGACCACCACA 59.265 61.111 0.00 0.00 40.12 4.17
3444 10247 2.048127 GGCTCGTGAGACCACCAC 60.048 66.667 0.00 0.00 40.12 4.16
3450 10253 2.292292 GAGAAGATAGGGCTCGTGAGAC 59.708 54.545 0.00 0.00 35.39 3.36
3451 10254 2.173782 AGAGAAGATAGGGCTCGTGAGA 59.826 50.000 0.00 0.00 39.12 3.27
3452 10255 2.293122 CAGAGAAGATAGGGCTCGTGAG 59.707 54.545 0.00 0.00 33.98 3.51
3453 10256 2.092375 TCAGAGAAGATAGGGCTCGTGA 60.092 50.000 0.00 0.00 33.98 4.35
3454 10257 2.034053 GTCAGAGAAGATAGGGCTCGTG 59.966 54.545 0.00 0.00 33.98 4.35
3455 10258 2.303175 GTCAGAGAAGATAGGGCTCGT 58.697 52.381 0.00 0.00 33.98 4.18
3456 10259 1.611491 GGTCAGAGAAGATAGGGCTCG 59.389 57.143 0.00 0.00 33.98 5.03
3457 10260 2.672098 TGGTCAGAGAAGATAGGGCTC 58.328 52.381 0.00 0.00 0.00 4.70
3458 10261 2.856760 TGGTCAGAGAAGATAGGGCT 57.143 50.000 0.00 0.00 0.00 5.19
3459 10262 2.968574 TCATGGTCAGAGAAGATAGGGC 59.031 50.000 0.00 0.00 0.00 5.19
3460 10263 3.963374 TGTCATGGTCAGAGAAGATAGGG 59.037 47.826 0.00 0.00 0.00 3.53
3461 10264 5.804944 ATGTCATGGTCAGAGAAGATAGG 57.195 43.478 0.00 0.00 0.00 2.57
3462 10265 7.651304 GTGTTATGTCATGGTCAGAGAAGATAG 59.349 40.741 0.00 0.00 0.00 2.08
3463 10266 7.343057 AGTGTTATGTCATGGTCAGAGAAGATA 59.657 37.037 0.00 0.00 0.00 1.98
3464 10267 6.155910 AGTGTTATGTCATGGTCAGAGAAGAT 59.844 38.462 0.00 0.00 0.00 2.40
3465 10268 5.481824 AGTGTTATGTCATGGTCAGAGAAGA 59.518 40.000 0.00 0.00 0.00 2.87
3466 10269 5.579904 CAGTGTTATGTCATGGTCAGAGAAG 59.420 44.000 0.00 0.00 0.00 2.85
3467 10270 5.482006 CAGTGTTATGTCATGGTCAGAGAA 58.518 41.667 0.00 0.00 0.00 2.87
3468 10271 4.621510 GCAGTGTTATGTCATGGTCAGAGA 60.622 45.833 0.00 0.00 0.00 3.10
3469 10272 3.620374 GCAGTGTTATGTCATGGTCAGAG 59.380 47.826 0.00 0.00 0.00 3.35
3470 10273 3.599343 GCAGTGTTATGTCATGGTCAGA 58.401 45.455 0.00 0.00 0.00 3.27
3471 10274 2.679837 GGCAGTGTTATGTCATGGTCAG 59.320 50.000 0.00 0.00 0.00 3.51
3472 10275 2.617788 GGGCAGTGTTATGTCATGGTCA 60.618 50.000 0.00 0.00 0.00 4.02
3473 10276 2.017049 GGGCAGTGTTATGTCATGGTC 58.983 52.381 0.00 0.00 0.00 4.02
3474 10277 1.635487 AGGGCAGTGTTATGTCATGGT 59.365 47.619 0.00 0.00 0.00 3.55
3475 10278 2.425143 AGGGCAGTGTTATGTCATGG 57.575 50.000 0.00 0.00 0.00 3.66
3476 10279 4.201950 GCTTAAGGGCAGTGTTATGTCATG 60.202 45.833 4.29 0.00 0.00 3.07
3477 10280 3.947834 GCTTAAGGGCAGTGTTATGTCAT 59.052 43.478 4.29 0.00 0.00 3.06
3478 10281 3.009033 AGCTTAAGGGCAGTGTTATGTCA 59.991 43.478 4.29 0.00 34.17 3.58
3479 10282 3.610911 AGCTTAAGGGCAGTGTTATGTC 58.389 45.455 4.29 0.00 34.17 3.06
3480 10283 3.721087 AGCTTAAGGGCAGTGTTATGT 57.279 42.857 4.29 0.00 34.17 2.29
3481 10284 3.758554 ACAAGCTTAAGGGCAGTGTTATG 59.241 43.478 0.00 0.00 31.73 1.90
3482 10285 3.758554 CACAAGCTTAAGGGCAGTGTTAT 59.241 43.478 0.00 0.00 36.49 1.89
3483 10286 3.146066 CACAAGCTTAAGGGCAGTGTTA 58.854 45.455 0.00 0.00 36.49 2.41
3484 10287 1.956477 CACAAGCTTAAGGGCAGTGTT 59.044 47.619 0.00 0.00 36.49 3.32
3485 10288 1.133792 ACACAAGCTTAAGGGCAGTGT 60.134 47.619 9.87 9.87 43.44 3.55
3486 10289 1.609208 ACACAAGCTTAAGGGCAGTG 58.391 50.000 0.00 3.83 42.16 3.66
3487 10290 3.412386 CTTACACAAGCTTAAGGGCAGT 58.588 45.455 0.00 0.00 34.17 4.40
3488 10291 2.749621 CCTTACACAAGCTTAAGGGCAG 59.250 50.000 15.36 0.00 40.50 4.85
3489 10292 2.373836 TCCTTACACAAGCTTAAGGGCA 59.626 45.455 20.63 4.91 43.25 5.36
3490 10293 3.067684 TCCTTACACAAGCTTAAGGGC 57.932 47.619 20.63 0.00 43.25 5.19
3491 10294 4.843728 TCATCCTTACACAAGCTTAAGGG 58.156 43.478 20.63 9.65 43.25 3.95
3492 10295 6.037610 GTCATCATCCTTACACAAGCTTAAGG 59.962 42.308 16.59 16.59 44.07 2.69
3493 10296 6.820656 AGTCATCATCCTTACACAAGCTTAAG 59.179 38.462 0.00 0.00 0.00 1.85
3494 10297 6.711277 AGTCATCATCCTTACACAAGCTTAA 58.289 36.000 0.00 0.00 0.00 1.85
3495 10298 6.299805 AGTCATCATCCTTACACAAGCTTA 57.700 37.500 0.00 0.00 0.00 3.09
3496 10299 5.171339 AGTCATCATCCTTACACAAGCTT 57.829 39.130 0.00 0.00 0.00 3.74
3497 10300 4.833478 AGTCATCATCCTTACACAAGCT 57.167 40.909 0.00 0.00 0.00 3.74
3498 10301 4.437930 GCAAGTCATCATCCTTACACAAGC 60.438 45.833 0.00 0.00 0.00 4.01
3499 10302 4.940046 AGCAAGTCATCATCCTTACACAAG 59.060 41.667 0.00 0.00 0.00 3.16
3500 10303 4.696877 CAGCAAGTCATCATCCTTACACAA 59.303 41.667 0.00 0.00 0.00 3.33
3501 10304 4.020307 TCAGCAAGTCATCATCCTTACACA 60.020 41.667 0.00 0.00 0.00 3.72
3502 10305 4.507710 TCAGCAAGTCATCATCCTTACAC 58.492 43.478 0.00 0.00 0.00 2.90
3503 10306 4.824479 TCAGCAAGTCATCATCCTTACA 57.176 40.909 0.00 0.00 0.00 2.41
3504 10307 4.024218 GCATCAGCAAGTCATCATCCTTAC 60.024 45.833 0.00 0.00 41.58 2.34
3505 10308 4.132336 GCATCAGCAAGTCATCATCCTTA 58.868 43.478 0.00 0.00 41.58 2.69
3506 10309 2.950309 GCATCAGCAAGTCATCATCCTT 59.050 45.455 0.00 0.00 41.58 3.36
3507 10310 2.573369 GCATCAGCAAGTCATCATCCT 58.427 47.619 0.00 0.00 41.58 3.24
3508 10311 1.607628 GGCATCAGCAAGTCATCATCC 59.392 52.381 0.00 0.00 44.61 3.51
3509 10312 2.294979 TGGCATCAGCAAGTCATCATC 58.705 47.619 0.00 0.00 44.61 2.92
3510 10313 2.430248 TGGCATCAGCAAGTCATCAT 57.570 45.000 0.00 0.00 44.61 2.45
3511 10314 2.430248 ATGGCATCAGCAAGTCATCA 57.570 45.000 0.00 0.00 44.61 3.07
3512 10315 3.795623 AAATGGCATCAGCAAGTCATC 57.204 42.857 0.00 0.00 44.61 2.92
3513 10316 3.259876 ACAAAATGGCATCAGCAAGTCAT 59.740 39.130 0.00 0.00 44.61 3.06
3514 10317 2.629137 ACAAAATGGCATCAGCAAGTCA 59.371 40.909 0.00 0.00 44.61 3.41
3515 10318 3.308438 ACAAAATGGCATCAGCAAGTC 57.692 42.857 0.00 0.00 44.61 3.01
3516 10319 3.756933 AACAAAATGGCATCAGCAAGT 57.243 38.095 0.00 0.00 44.61 3.16
3517 10320 4.389687 GGTAAACAAAATGGCATCAGCAAG 59.610 41.667 0.00 0.00 44.61 4.01
3518 10321 4.314121 GGTAAACAAAATGGCATCAGCAA 58.686 39.130 0.00 0.00 44.61 3.91
3519 10322 3.613671 CGGTAAACAAAATGGCATCAGCA 60.614 43.478 0.00 0.00 44.61 4.41
3520 10323 2.923020 CGGTAAACAAAATGGCATCAGC 59.077 45.455 0.00 0.00 41.10 4.26
3521 10324 3.510719 CCGGTAAACAAAATGGCATCAG 58.489 45.455 0.00 0.00 0.00 2.90
3522 10325 2.353208 GCCGGTAAACAAAATGGCATCA 60.353 45.455 1.90 0.00 42.03 3.07
3523 10326 2.094234 AGCCGGTAAACAAAATGGCATC 60.094 45.455 1.90 0.00 44.83 3.91
3524 10327 1.899142 AGCCGGTAAACAAAATGGCAT 59.101 42.857 1.90 0.00 44.83 4.40
3525 10328 1.333177 AGCCGGTAAACAAAATGGCA 58.667 45.000 1.90 0.00 44.83 4.92
3526 10329 3.579335 TTAGCCGGTAAACAAAATGGC 57.421 42.857 1.90 0.00 42.76 4.40
3540 10343 1.449601 AGTCCATGCCGTTTAGCCG 60.450 57.895 0.00 0.00 0.00 5.52
3541 10344 0.676782 ACAGTCCATGCCGTTTAGCC 60.677 55.000 0.00 0.00 0.00 3.93
3542 10345 1.135689 CAACAGTCCATGCCGTTTAGC 60.136 52.381 0.00 0.00 0.00 3.09
3543 10346 1.135689 GCAACAGTCCATGCCGTTTAG 60.136 52.381 0.00 0.00 36.56 1.85
3544 10347 0.878416 GCAACAGTCCATGCCGTTTA 59.122 50.000 0.00 0.00 36.56 2.01
3545 10348 1.659794 GCAACAGTCCATGCCGTTT 59.340 52.632 0.00 0.00 36.56 3.60
3546 10349 3.354678 GCAACAGTCCATGCCGTT 58.645 55.556 0.00 0.00 36.56 4.44
3559 10362 6.346838 GCTCATGTTAGAAAATTTGTGGCAAC 60.347 38.462 0.00 0.00 0.00 4.17
3560 10363 5.695816 GCTCATGTTAGAAAATTTGTGGCAA 59.304 36.000 0.00 0.00 0.00 4.52
3561 10364 5.221402 TGCTCATGTTAGAAAATTTGTGGCA 60.221 36.000 0.00 0.00 0.00 4.92
3562 10365 5.229423 TGCTCATGTTAGAAAATTTGTGGC 58.771 37.500 0.00 0.00 0.00 5.01
3563 10366 7.712264 TTTGCTCATGTTAGAAAATTTGTGG 57.288 32.000 0.00 0.00 0.00 4.17
3571 10374 9.283768 TGAAAGAGTATTTGCTCATGTTAGAAA 57.716 29.630 0.00 0.00 37.94 2.52
3572 10375 8.846943 TGAAAGAGTATTTGCTCATGTTAGAA 57.153 30.769 0.00 0.00 37.94 2.10
3573 10376 8.097038 ACTGAAAGAGTATTTGCTCATGTTAGA 58.903 33.333 0.00 0.00 37.94 2.10
3574 10377 8.261492 ACTGAAAGAGTATTTGCTCATGTTAG 57.739 34.615 0.00 0.00 37.94 2.34
3575 10378 7.877612 TGACTGAAAGAGTATTTGCTCATGTTA 59.122 33.333 0.00 0.00 37.94 2.41
3576 10379 6.712095 TGACTGAAAGAGTATTTGCTCATGTT 59.288 34.615 0.00 0.00 37.94 2.71
3577 10380 6.233434 TGACTGAAAGAGTATTTGCTCATGT 58.767 36.000 0.00 0.00 37.94 3.21
3578 10381 6.732531 TGACTGAAAGAGTATTTGCTCATG 57.267 37.500 0.00 0.00 37.94 3.07
3579 10382 7.934855 AATGACTGAAAGAGTATTTGCTCAT 57.065 32.000 0.00 0.00 37.94 2.90
3580 10383 7.750229 AAATGACTGAAAGAGTATTTGCTCA 57.250 32.000 0.00 0.00 37.94 4.26
3603 10406 7.169982 TCTGCGAGTTTTTGTTCAAAAGAAAAA 59.830 29.630 9.98 4.06 40.11 1.94
3604 10407 6.642950 TCTGCGAGTTTTTGTTCAAAAGAAAA 59.357 30.769 9.98 0.00 34.90 2.29
3605 10408 6.153067 TCTGCGAGTTTTTGTTCAAAAGAAA 58.847 32.000 9.98 0.00 34.90 2.52
3606 10409 5.704888 TCTGCGAGTTTTTGTTCAAAAGAA 58.295 33.333 9.98 0.00 34.90 2.52
3607 10410 5.303747 TCTGCGAGTTTTTGTTCAAAAGA 57.696 34.783 9.98 1.54 34.90 2.52
3608 10411 5.344665 TGTTCTGCGAGTTTTTGTTCAAAAG 59.655 36.000 9.98 2.05 34.90 2.27
3609 10412 5.223382 TGTTCTGCGAGTTTTTGTTCAAAA 58.777 33.333 6.61 6.61 31.50 2.44
3610 10413 4.799678 TGTTCTGCGAGTTTTTGTTCAAA 58.200 34.783 0.00 0.00 0.00 2.69
3611 10414 4.427096 TGTTCTGCGAGTTTTTGTTCAA 57.573 36.364 0.00 0.00 0.00 2.69
3612 10415 4.427096 TTGTTCTGCGAGTTTTTGTTCA 57.573 36.364 0.00 0.00 0.00 3.18
3613 10416 4.258860 CGTTTGTTCTGCGAGTTTTTGTTC 60.259 41.667 0.00 0.00 0.00 3.18
3614 10417 3.606346 CGTTTGTTCTGCGAGTTTTTGTT 59.394 39.130 0.00 0.00 0.00 2.83
3615 10418 3.168193 CGTTTGTTCTGCGAGTTTTTGT 58.832 40.909 0.00 0.00 0.00 2.83
3616 10419 3.168193 ACGTTTGTTCTGCGAGTTTTTG 58.832 40.909 0.00 0.00 0.00 2.44
3617 10420 3.481112 ACGTTTGTTCTGCGAGTTTTT 57.519 38.095 0.00 0.00 0.00 1.94
3618 10421 3.481112 AACGTTTGTTCTGCGAGTTTT 57.519 38.095 0.00 0.00 30.83 2.43
3628 10431 8.762426 ACTGAAAGAGTATTAGAACGTTTGTTC 58.238 33.333 0.46 0.00 46.07 3.18
3629 10432 8.658499 ACTGAAAGAGTATTAGAACGTTTGTT 57.342 30.769 0.46 0.00 38.22 2.83
3630 10433 8.142551 AGACTGAAAGAGTATTAGAACGTTTGT 58.857 33.333 0.46 0.00 37.43 2.83
3631 10434 8.522178 AGACTGAAAGAGTATTAGAACGTTTG 57.478 34.615 0.46 0.00 37.43 2.93
3632 10435 8.578151 AGAGACTGAAAGAGTATTAGAACGTTT 58.422 33.333 0.46 0.00 37.43 3.60
3633 10436 8.113173 AGAGACTGAAAGAGTATTAGAACGTT 57.887 34.615 0.00 0.00 37.43 3.99
3634 10437 7.690952 AGAGACTGAAAGAGTATTAGAACGT 57.309 36.000 0.00 0.00 37.43 3.99
3894 10728 7.638134 GCATAATGCAAGAAAACAAAAAGGAA 58.362 30.769 0.00 0.00 44.26 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.