Multiple sequence alignment - TraesCS2A01G286200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G286200 chr2A 100.000 6399 0 0 1 6399 485795443 485789045 0.000000e+00 11817.0
1 TraesCS2A01G286200 chr2A 80.723 166 25 4 4 163 307675270 307675106 8.710000e-24 122.0
2 TraesCS2A01G286200 chr2A 92.308 78 4 2 6319 6394 256789407 256789484 6.780000e-20 110.0
3 TraesCS2A01G286200 chr2A 91.176 68 6 0 5542 5609 485789834 485789767 6.830000e-15 93.5
4 TraesCS2A01G286200 chr2A 91.176 68 6 0 5610 5677 485789902 485789835 6.830000e-15 93.5
5 TraesCS2A01G286200 chr2D 95.944 4832 141 29 665 5477 360491915 360487120 0.000000e+00 7786.0
6 TraesCS2A01G286200 chr2D 93.008 472 32 1 177 648 360552854 360552384 0.000000e+00 688.0
7 TraesCS2A01G286200 chr2D 84.010 419 48 11 5889 6301 360483570 360483165 1.010000e-102 385.0
8 TraesCS2A01G286200 chr2D 85.634 355 44 6 199 552 292607044 292607392 3.650000e-97 366.0
9 TraesCS2A01G286200 chr2D 87.580 314 36 3 199 512 365388443 365388753 1.700000e-95 361.0
10 TraesCS2A01G286200 chr2D 83.511 376 52 6 177 551 477822975 477823341 6.140000e-90 342.0
11 TraesCS2A01G286200 chr2D 80.303 132 18 5 35 163 331445840 331445714 6.830000e-15 93.5
12 TraesCS2A01G286200 chr2B 95.728 4845 140 33 651 5481 429143848 429148639 0.000000e+00 7738.0
13 TraesCS2A01G286200 chr2B 88.055 653 54 12 1 651 429143191 429143821 0.000000e+00 752.0
14 TraesCS2A01G286200 chr2B 93.704 270 14 3 5516 5782 429148639 429148908 9.990000e-108 401.0
15 TraesCS2A01G286200 chr2B 86.723 354 39 7 5924 6272 429148914 429149264 2.800000e-103 387.0
16 TraesCS2A01G286200 chr2B 93.846 130 7 1 5774 5902 767419895 767419766 1.820000e-45 195.0
17 TraesCS2A01G286200 chr2B 91.379 58 5 0 5542 5599 429148736 429148793 5.320000e-11 80.5
18 TraesCS2A01G286200 chr7A 84.211 380 55 5 175 552 167520899 167521275 1.310000e-96 364.0
19 TraesCS2A01G286200 chr7A 97.479 119 3 0 5779 5897 14888023 14888141 3.020000e-48 204.0
20 TraesCS2A01G286200 chr1D 84.958 359 49 5 194 552 96481404 96481051 6.100000e-95 359.0
21 TraesCS2A01G286200 chr1D 85.944 249 32 2 307 555 231030817 231030572 4.920000e-66 263.0
22 TraesCS2A01G286200 chr1D 83.495 103 9 6 62 162 181215230 181215326 8.840000e-14 89.8
23 TraesCS2A01G286200 chr7B 83.862 378 54 6 175 550 129959678 129960050 2.840000e-93 353.0
24 TraesCS2A01G286200 chr7D 84.488 361 51 5 193 552 334827159 334827515 1.020000e-92 351.0
25 TraesCS2A01G286200 chr7D 83.558 371 55 6 181 550 29364587 29364222 6.140000e-90 342.0
26 TraesCS2A01G286200 chr7D 83.667 300 43 6 252 550 363036578 363036872 1.760000e-70 278.0
27 TraesCS2A01G286200 chr7D 98.305 118 2 0 5779 5896 253793586 253793469 2.340000e-49 207.0
28 TraesCS2A01G286200 chr7D 95.775 71 3 0 6329 6399 437495934 437495864 1.460000e-21 115.0
29 TraesCS2A01G286200 chr7D 95.775 71 3 0 6324 6394 506013741 506013811 1.460000e-21 115.0
30 TraesCS2A01G286200 chr7D 79.503 161 29 4 4 163 527952508 527952665 1.890000e-20 111.0
31 TraesCS2A01G286200 chr7D 87.097 93 8 3 80 170 255287518 255287608 1.140000e-17 102.0
32 TraesCS2A01G286200 chr7D 87.097 93 8 3 71 162 322639223 322639312 1.140000e-17 102.0
33 TraesCS2A01G286200 chr7D 87.097 93 8 3 80 170 329602217 329602127 1.140000e-17 102.0
34 TraesCS2A01G286200 chr7D 87.500 88 6 4 67 154 240506672 240506754 5.280000e-16 97.1
35 TraesCS2A01G286200 chr7D 77.576 165 26 10 4 163 527856133 527856291 8.840000e-14 89.8
36 TraesCS2A01G286200 chr5B 83.871 372 55 5 181 552 141499989 141499623 3.670000e-92 350.0
37 TraesCS2A01G286200 chr5B 92.857 140 10 0 5779 5918 79817875 79818014 3.020000e-48 204.0
38 TraesCS2A01G286200 chr5B 87.097 124 15 1 42 165 295337541 295337663 8.650000e-29 139.0
39 TraesCS2A01G286200 chr5B 86.290 124 15 2 41 164 330124490 330124611 4.020000e-27 134.0
40 TraesCS2A01G286200 chr5B 86.290 124 16 1 41 164 330434017 330434139 4.020000e-27 134.0
41 TraesCS2A01G286200 chr5B 81.988 161 24 4 4 163 88368270 88368114 1.450000e-26 132.0
42 TraesCS2A01G286200 chr4D 83.827 371 56 4 180 550 191296451 191296085 3.670000e-92 350.0
43 TraesCS2A01G286200 chr4D 79.944 359 60 11 199 552 230920677 230920326 2.960000e-63 254.0
44 TraesCS2A01G286200 chr4D 91.250 80 5 2 6315 6394 18518964 18519041 2.440000e-19 108.0
45 TraesCS2A01G286200 chr4D 89.655 87 5 4 6310 6394 433702772 433702856 2.440000e-19 108.0
46 TraesCS2A01G286200 chr4D 87.640 89 8 2 74 162 150012642 150012727 4.080000e-17 100.0
47 TraesCS2A01G286200 chr4D 86.316 95 9 3 78 170 263932481 263932389 4.080000e-17 100.0
48 TraesCS2A01G286200 chr4D 88.235 85 8 1 78 162 267325386 267325468 4.080000e-17 100.0
49 TraesCS2A01G286200 chr4D 86.957 92 8 3 80 169 421504824 421504735 4.080000e-17 100.0
50 TraesCS2A01G286200 chr4D 84.762 105 8 7 71 172 209925344 209925443 1.470000e-16 99.0
51 TraesCS2A01G286200 chr4D 91.667 72 4 1 91 162 445545911 445545980 1.470000e-16 99.0
52 TraesCS2A01G286200 chr4D 89.024 82 5 3 91 170 463856484 463856405 1.470000e-16 99.0
53 TraesCS2A01G286200 chr4D 88.889 81 5 3 92 170 169068062 169067984 5.280000e-16 97.1
54 TraesCS2A01G286200 chr4D 85.870 92 9 3 80 169 180407373 180407284 1.900000e-15 95.3
55 TraesCS2A01G286200 chr4D 85.870 92 9 3 80 169 210837829 210837740 1.900000e-15 95.3
56 TraesCS2A01G286200 chr4D 87.059 85 9 1 78 162 323695566 323695648 1.900000e-15 95.3
57 TraesCS2A01G286200 chr4D 83.962 106 8 7 67 170 263938969 263938871 6.830000e-15 93.5
58 TraesCS2A01G286200 chr4D 83.333 102 13 3 71 170 262853822 262853723 2.460000e-14 91.6
59 TraesCS2A01G286200 chr6B 84.225 355 52 4 199 552 277590076 277589725 6.140000e-90 342.0
60 TraesCS2A01G286200 chr6B 79.558 362 69 5 196 557 536809723 536810079 2.960000e-63 254.0
61 TraesCS2A01G286200 chr6B 95.968 124 5 0 5780 5903 267021774 267021897 1.090000e-47 202.0
62 TraesCS2A01G286200 chr6B 80.124 161 29 3 4 164 333220781 333220938 4.050000e-22 117.0
63 TraesCS2A01G286200 chr6B 91.250 80 5 2 6319 6396 494603985 494604064 2.440000e-19 108.0
64 TraesCS2A01G286200 chr6B 90.476 84 4 3 6311 6394 533541779 533541858 2.440000e-19 108.0
65 TraesCS2A01G286200 chr6B 87.097 93 8 3 80 170 214703799 214703709 1.140000e-17 102.0
66 TraesCS2A01G286200 chr3D 86.940 268 33 2 285 552 298512035 298512300 3.750000e-77 300.0
67 TraesCS2A01G286200 chr3D 84.354 147 14 6 33 175 349897379 349897520 1.120000e-27 135.0
68 TraesCS2A01G286200 chr3D 81.169 154 22 4 1 147 189417898 189417745 4.050000e-22 117.0
69 TraesCS2A01G286200 chr3D 95.455 66 3 0 6329 6394 401163324 401163259 8.770000e-19 106.0
70 TraesCS2A01G286200 chr1B 81.967 366 44 12 196 552 156690553 156690905 2.260000e-74 291.0
71 TraesCS2A01G286200 chr1B 93.182 132 8 1 5770 5901 355153148 355153018 6.550000e-45 193.0
72 TraesCS2A01G286200 chr1B 86.957 92 8 3 80 169 200338818 200338907 4.080000e-17 100.0
73 TraesCS2A01G286200 chr5D 80.055 366 57 13 189 550 112696215 112696568 2.290000e-64 257.0
74 TraesCS2A01G286200 chr5D 94.615 130 6 1 5769 5897 420228295 420228166 3.910000e-47 200.0
75 TraesCS2A01G286200 chr5D 88.043 92 7 3 71 161 87438760 87438672 8.770000e-19 106.0
76 TraesCS2A01G286200 chr5D 87.097 93 7 4 80 170 140429640 140429729 4.080000e-17 100.0
77 TraesCS2A01G286200 chr6D 97.458 118 3 0 5780 5897 430998464 430998581 1.090000e-47 202.0
78 TraesCS2A01G286200 chr6D 82.609 161 25 3 4 164 256588451 256588294 8.650000e-29 139.0
79 TraesCS2A01G286200 chr6D 89.474 76 8 0 79 154 163478085 163478160 5.280000e-16 97.1
80 TraesCS2A01G286200 chr6D 86.022 93 9 3 80 170 237571785 237571695 5.280000e-16 97.1
81 TraesCS2A01G286200 chr6D 81.818 110 14 3 54 161 219143244 219143139 3.180000e-13 87.9
82 TraesCS2A01G286200 chr3B 96.694 121 4 0 5777 5897 796433078 796433198 1.090000e-47 202.0
83 TraesCS2A01G286200 chr1A 85.821 134 19 0 419 552 318430857 318430990 6.690000e-30 143.0
84 TraesCS2A01G286200 chr6A 74.474 333 62 19 199 520 368760521 368760841 8.710000e-24 122.0
85 TraesCS2A01G286200 chr6A 79.839 124 19 5 42 163 248532824 248532705 1.140000e-12 86.1
86 TraesCS2A01G286200 chr4B 86.364 110 14 1 55 164 110694802 110694694 1.130000e-22 119.0
87 TraesCS2A01G286200 chr4B 95.775 71 3 0 6324 6394 188275443 188275513 1.460000e-21 115.0
88 TraesCS2A01G286200 chr4B 80.292 137 18 6 42 172 359793353 359793486 1.900000e-15 95.3
89 TraesCS2A01G286200 chrUn 87.952 83 7 2 80 162 137052155 137052076 1.900000e-15 95.3
90 TraesCS2A01G286200 chrUn 87.952 83 6 3 90 170 327265025 327265105 1.900000e-15 95.3
91 TraesCS2A01G286200 chrUn 87.952 83 6 3 90 170 327274059 327274139 1.900000e-15 95.3
92 TraesCS2A01G286200 chrUn 87.805 82 5 4 91 170 303924819 303924741 2.460000e-14 91.6
93 TraesCS2A01G286200 chrUn 90.769 65 4 1 99 163 54574414 54574476 1.140000e-12 86.1
94 TraesCS2A01G286200 chrUn 85.915 71 8 1 92 162 316873229 316873161 2.470000e-09 75.0
95 TraesCS2A01G286200 chrUn 85.075 67 8 2 89 154 259712194 259712259 4.140000e-07 67.6
96 TraesCS2A01G286200 chrUn 85.075 67 8 2 89 154 275901938 275902003 4.140000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G286200 chr2A 485789045 485795443 6398 True 11817.0 11817 100.0000 1 6399 1 chr2A.!!$R2 6398
1 TraesCS2A01G286200 chr2D 360483165 360491915 8750 True 4085.5 7786 89.9770 665 6301 2 chr2D.!!$R3 5636
2 TraesCS2A01G286200 chr2B 429143191 429149264 6073 False 1871.7 7738 91.1178 1 6272 5 chr2B.!!$F1 6271

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
125 127 0.950836 CATGTTCGGACCACTTTGCA 59.049 50.000 0.00 0.00 0.00 4.08 F
235 238 0.955919 GTAGTGACCCTTGTGGCTGC 60.956 60.000 0.00 0.00 37.83 5.25 F
1790 1833 0.036294 GAACCAGGCCGCTTTCTAGT 60.036 55.000 0.00 0.00 0.00 2.57 F
1791 1834 0.321653 AACCAGGCCGCTTTCTAGTG 60.322 55.000 0.00 0.00 0.00 2.74 F
2650 2707 1.066787 ACTAGCCTTCTTGCTTCGGTC 60.067 52.381 0.00 0.00 42.75 4.79 F
4282 4339 1.135199 CATTTGGTGATGCTGCACTCC 60.135 52.381 3.57 10.04 38.78 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1089 1129 0.106967 GTTGGAGGAGGGGAATGCTC 60.107 60.0 0.00 0.0 36.96 4.26 R
1793 1836 0.320946 CAACAAGCAATGGCAAGGGG 60.321 55.0 0.00 0.0 44.61 4.79 R
3503 3560 0.324645 AAGCATCCCAAAAGCCCGAT 60.325 50.0 0.00 0.0 0.00 4.18 R
3524 3581 0.968405 TGAATGGAAGGCACAAAGGC 59.032 50.0 0.00 0.0 44.61 4.35 R
4648 4705 0.946221 ACGAGCTGCGGAGAAACAAG 60.946 55.0 8.65 0.0 46.49 3.16 R
5784 9261 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.0 13.64 0.0 46.06 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 43 1.066430 CGCCCTACTCTACCTTGCAAA 60.066 52.381 0.00 0.00 0.00 3.68
49 51 1.689813 TCTACCTTGCAAACCTCACGA 59.310 47.619 0.00 0.00 0.00 4.35
60 62 3.125573 CTCACGACGAGGCTCCGA 61.126 66.667 18.00 3.25 38.18 4.55
86 88 6.459435 CGAGCATGAGATAGAGAAGAAGAACA 60.459 42.308 0.00 0.00 0.00 3.18
87 89 7.364149 AGCATGAGATAGAGAAGAAGAACAT 57.636 36.000 0.00 0.00 0.00 2.71
97 99 4.058817 AGAAGAAGAACATTGGACACGAC 58.941 43.478 0.00 0.00 0.00 4.34
99 101 3.393800 AGAAGAACATTGGACACGACAG 58.606 45.455 0.00 0.00 0.00 3.51
108 110 1.695242 TGGACACGACAGTTTACCCAT 59.305 47.619 0.00 0.00 0.00 4.00
109 111 2.073816 GGACACGACAGTTTACCCATG 58.926 52.381 0.00 0.00 0.00 3.66
115 117 2.610976 CGACAGTTTACCCATGTTCGGA 60.611 50.000 0.00 0.00 0.00 4.55
120 122 1.354101 TTACCCATGTTCGGACCACT 58.646 50.000 0.00 0.00 0.00 4.00
125 127 0.950836 CATGTTCGGACCACTTTGCA 59.049 50.000 0.00 0.00 0.00 4.08
151 153 2.568623 AACCCTACTCCTGCTTTGTG 57.431 50.000 0.00 0.00 0.00 3.33
155 157 2.304761 CCCTACTCCTGCTTTGTGGTTA 59.695 50.000 0.00 0.00 0.00 2.85
166 168 3.255642 GCTTTGTGGTTAGGATTGCTTGA 59.744 43.478 0.00 0.00 0.00 3.02
170 172 2.026262 GTGGTTAGGATTGCTTGAGGGA 60.026 50.000 0.00 0.00 0.00 4.20
171 173 2.239654 TGGTTAGGATTGCTTGAGGGAG 59.760 50.000 0.00 0.00 0.00 4.30
172 174 2.505819 GGTTAGGATTGCTTGAGGGAGA 59.494 50.000 0.00 0.00 0.00 3.71
174 176 4.385754 GGTTAGGATTGCTTGAGGGAGAAT 60.386 45.833 0.00 0.00 0.00 2.40
235 238 0.955919 GTAGTGACCCTTGTGGCTGC 60.956 60.000 0.00 0.00 37.83 5.25
237 240 1.827789 GTGACCCTTGTGGCTGCAA 60.828 57.895 0.50 0.00 37.83 4.08
253 256 3.165890 CTGCAACGTATCATGTTTGCAG 58.834 45.455 17.25 17.25 39.87 4.41
259 262 5.291293 ACGTATCATGTTTGCAGGTTTAC 57.709 39.130 0.00 0.00 0.00 2.01
260 263 5.001232 ACGTATCATGTTTGCAGGTTTACT 58.999 37.500 0.00 0.00 0.00 2.24
274 277 6.978343 CAGGTTTACTGTAATCGAATGGAA 57.022 37.500 0.37 0.00 42.42 3.53
275 278 7.005062 CAGGTTTACTGTAATCGAATGGAAG 57.995 40.000 0.37 0.00 42.42 3.46
276 279 6.816640 CAGGTTTACTGTAATCGAATGGAAGA 59.183 38.462 0.37 0.00 42.42 2.87
277 280 7.495934 CAGGTTTACTGTAATCGAATGGAAGAT 59.504 37.037 0.37 0.00 42.42 2.40
278 281 8.701895 AGGTTTACTGTAATCGAATGGAAGATA 58.298 33.333 0.37 0.00 0.00 1.98
279 282 8.762426 GGTTTACTGTAATCGAATGGAAGATAC 58.238 37.037 0.37 0.00 0.00 2.24
280 283 8.477709 GTTTACTGTAATCGAATGGAAGATACG 58.522 37.037 0.37 0.00 0.00 3.06
281 284 6.387041 ACTGTAATCGAATGGAAGATACGA 57.613 37.500 0.00 0.00 37.39 3.43
282 285 6.802608 ACTGTAATCGAATGGAAGATACGAA 58.197 36.000 0.00 0.00 36.62 3.85
283 286 6.918569 ACTGTAATCGAATGGAAGATACGAAG 59.081 38.462 0.00 0.00 36.62 3.79
301 304 3.181483 CGAAGTAGGGTTACGGCACTATT 60.181 47.826 0.00 0.00 34.88 1.73
302 305 4.366586 GAAGTAGGGTTACGGCACTATTC 58.633 47.826 0.00 0.00 34.88 1.75
313 316 2.932614 CGGCACTATTCTCAACTCTTGG 59.067 50.000 0.00 0.00 0.00 3.61
325 328 1.356124 ACTCTTGGCTGTGAGTGGAT 58.644 50.000 6.77 0.00 41.40 3.41
349 352 3.067106 ACGCCACAAGACTAGAACATTG 58.933 45.455 0.00 0.00 0.00 2.82
355 358 4.623167 CACAAGACTAGAACATTGTCTCCG 59.377 45.833 0.00 0.00 42.23 4.63
407 410 4.764308 TGAGCCAAGCATTTGTGTATTGTA 59.236 37.500 0.00 0.00 32.21 2.41
423 426 7.333423 TGTGTATTGTAAAAGCACTGGATCTAC 59.667 37.037 0.00 0.00 36.14 2.59
438 441 8.947115 CACTGGATCTACGATGTAATACTATGA 58.053 37.037 0.00 0.00 0.00 2.15
472 475 5.677319 TTCTTGGTATTTCATCCTCGACT 57.323 39.130 0.00 0.00 0.00 4.18
475 478 4.123497 TGGTATTTCATCCTCGACTGTG 57.877 45.455 0.00 0.00 0.00 3.66
483 486 1.672030 CCTCGACTGTGCATGCCAA 60.672 57.895 16.68 1.77 0.00 4.52
484 487 1.499056 CTCGACTGTGCATGCCAAC 59.501 57.895 16.68 8.33 0.00 3.77
514 517 1.288127 GGACTGACACGGTAAGCGT 59.712 57.895 0.00 0.00 0.00 5.07
543 546 1.192803 GGCTCCTATAAGGGACCGGG 61.193 65.000 6.32 0.00 35.59 5.73
571 574 5.298026 TGACATCAACGATTCTTGTTCCAAA 59.702 36.000 0.00 0.00 0.00 3.28
597 600 5.175859 TCATTCGGTTCAAGTGATCCTTAC 58.824 41.667 6.80 0.00 32.94 2.34
599 602 2.901192 TCGGTTCAAGTGATCCTTACCA 59.099 45.455 12.55 0.00 33.15 3.25
610 613 5.103940 AGTGATCCTTACCAGCCAATACATT 60.104 40.000 0.00 0.00 0.00 2.71
613 616 7.284489 GTGATCCTTACCAGCCAATACATTTTA 59.716 37.037 0.00 0.00 0.00 1.52
614 617 7.284489 TGATCCTTACCAGCCAATACATTTTAC 59.716 37.037 0.00 0.00 0.00 2.01
713 743 3.202906 TGCCACGCATAATAAGAACTCC 58.797 45.455 0.00 0.00 31.71 3.85
719 749 6.747280 CCACGCATAATAAGAACTCCAAAAAG 59.253 38.462 0.00 0.00 0.00 2.27
723 756 9.573133 CGCATAATAAGAACTCCAAAAAGAAAT 57.427 29.630 0.00 0.00 0.00 2.17
783 817 4.373156 AACAAACTTGCTCTACCTCCAT 57.627 40.909 0.00 0.00 0.00 3.41
788 822 3.679389 ACTTGCTCTACCTCCATGTTTG 58.321 45.455 0.00 0.00 0.00 2.93
801 835 6.016276 ACCTCCATGTTTGTTTATCAAGTGAC 60.016 38.462 0.00 0.00 37.35 3.67
803 837 7.255590 CCTCCATGTTTGTTTATCAAGTGACTT 60.256 37.037 0.00 0.00 37.35 3.01
821 858 7.840931 AGTGACTTATATCATCGCCATCAATA 58.159 34.615 0.00 0.00 0.00 1.90
963 1002 5.642063 TCGTACCTCACCTTTTGATCATTTC 59.358 40.000 0.00 0.00 32.17 2.17
968 1007 7.795047 ACCTCACCTTTTGATCATTTCTTTTT 58.205 30.769 0.00 0.00 32.17 1.94
1086 1126 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
1087 1127 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
1088 1128 3.051803 AGAGAGAGAGAGAGAGAGAGGGA 60.052 52.174 0.00 0.00 0.00 4.20
1089 1129 3.312890 AGAGAGAGAGAGAGAGAGGGAG 58.687 54.545 0.00 0.00 0.00 4.30
1090 1130 3.051803 AGAGAGAGAGAGAGAGAGGGAGA 60.052 52.174 0.00 0.00 0.00 3.71
1091 1131 3.312890 AGAGAGAGAGAGAGAGGGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
1151 1193 0.322906 CCAAAGCTCCCCACTTCTCC 60.323 60.000 0.00 0.00 0.00 3.71
1387 1430 2.433318 GTCTGGTGCGGAGTCTGC 60.433 66.667 17.47 17.47 0.00 4.26
1394 1437 2.202623 GCGGAGTCTGCAGTACCG 60.203 66.667 29.14 29.14 45.26 4.02
1565 1608 4.625028 GCTGATCTTTCTTTGCAGGTTTT 58.375 39.130 0.00 0.00 0.00 2.43
1602 1645 4.162690 GGCGGTCGCAATCCTCCT 62.163 66.667 17.21 0.00 44.11 3.69
1604 1647 1.300233 GCGGTCGCAATCCTCCTAG 60.300 63.158 10.67 0.00 41.49 3.02
1667 1710 4.748600 GCGTGTTCTAAATAGGGTATGGAC 59.251 45.833 0.00 0.00 0.00 4.02
1728 1771 1.284198 AGCTGCAGATCTGAAACCCAT 59.716 47.619 27.04 1.85 0.00 4.00
1729 1772 2.097825 GCTGCAGATCTGAAACCCATT 58.902 47.619 27.04 0.00 0.00 3.16
1782 1825 3.628646 ATGAGGTGAACCAGGCCGC 62.629 63.158 0.00 0.00 38.89 6.53
1783 1826 4.021925 GAGGTGAACCAGGCCGCT 62.022 66.667 0.00 0.00 38.89 5.52
1784 1827 3.553095 GAGGTGAACCAGGCCGCTT 62.553 63.158 0.00 0.00 38.89 4.68
1785 1828 2.597510 GGTGAACCAGGCCGCTTT 60.598 61.111 0.00 0.00 35.64 3.51
1786 1829 2.626780 GGTGAACCAGGCCGCTTTC 61.627 63.158 0.00 1.35 35.64 2.62
1787 1830 1.600916 GTGAACCAGGCCGCTTTCT 60.601 57.895 12.64 0.00 0.00 2.52
1788 1831 0.321298 GTGAACCAGGCCGCTTTCTA 60.321 55.000 12.64 0.34 0.00 2.10
1789 1832 0.036388 TGAACCAGGCCGCTTTCTAG 60.036 55.000 12.64 0.00 0.00 2.43
1790 1833 0.036294 GAACCAGGCCGCTTTCTAGT 60.036 55.000 0.00 0.00 0.00 2.57
1791 1834 0.321653 AACCAGGCCGCTTTCTAGTG 60.322 55.000 0.00 0.00 0.00 2.74
1792 1835 2.109126 CCAGGCCGCTTTCTAGTGC 61.109 63.158 0.00 0.00 0.00 4.40
1793 1836 2.109126 CAGGCCGCTTTCTAGTGCC 61.109 63.158 0.00 0.00 39.98 5.01
1794 1837 2.824489 GGCCGCTTTCTAGTGCCC 60.824 66.667 0.00 0.00 36.20 5.36
1795 1838 2.824489 GCCGCTTTCTAGTGCCCC 60.824 66.667 0.00 0.00 0.00 5.80
1834 1891 2.428890 CCAGTGTTGGTTGCCAGTTTTA 59.571 45.455 0.00 0.00 39.79 1.52
1895 1952 3.070018 GCATTAGTTGTGTGCTCTCTGT 58.930 45.455 0.00 0.00 36.02 3.41
1938 1995 4.618489 CAGCTTCCATTTGTTGATTTCGTC 59.382 41.667 0.00 0.00 0.00 4.20
2047 2104 1.369625 GCACCATGACCTACTTTCCG 58.630 55.000 0.00 0.00 0.00 4.30
2104 2161 1.579429 GCAATGTGACCGGAACACC 59.421 57.895 24.62 11.88 37.45 4.16
2542 2599 7.330208 GCATCATAGTTTTCTGATTTGCTGTTT 59.670 33.333 0.00 0.00 29.74 2.83
2578 2635 7.653713 CGTGCATCTAGATCTTATGGTTTAACT 59.346 37.037 15.67 0.00 0.00 2.24
2650 2707 1.066787 ACTAGCCTTCTTGCTTCGGTC 60.067 52.381 0.00 0.00 42.75 4.79
2666 2723 2.835764 TCGGTCCTGCCAGTTATTACTT 59.164 45.455 0.00 0.00 36.97 2.24
2762 2819 5.562696 GCTGCACAATTCTGTAGCTACAAAA 60.563 40.000 25.95 20.52 44.12 2.44
2781 2838 1.602311 ATCTCCCGAATTGCATGAGC 58.398 50.000 0.00 0.00 42.57 4.26
2824 2881 2.306805 TCCAGTTGCATCTGATGTCCTT 59.693 45.455 23.46 1.07 37.61 3.36
3503 3560 3.207265 TGCAAACTGCTGAGGAGTTTA 57.793 42.857 27.57 13.73 45.31 2.01
3524 3581 1.512694 GGGCTTTTGGGATGCTTCG 59.487 57.895 0.00 0.00 0.00 3.79
3578 3635 4.098196 TGTGGGCAACTAACAGGTTTAAAC 59.902 41.667 9.98 9.98 0.00 2.01
3608 3665 2.300152 TGCTCCGACACTTGATTCTTCT 59.700 45.455 0.00 0.00 0.00 2.85
3747 3804 4.737855 TGAGCCTTTATCCTGTACACTC 57.262 45.455 0.00 0.00 0.00 3.51
3990 4047 1.444212 CTGCCCAAATTTCACGCGG 60.444 57.895 12.47 0.00 0.00 6.46
4282 4339 1.135199 CATTTGGTGATGCTGCACTCC 60.135 52.381 3.57 10.04 38.78 3.85
4431 4488 6.002704 GGTAGATGAGAGCAATGAAATGGAT 58.997 40.000 0.00 0.00 0.00 3.41
4564 4621 2.370189 GCCTGGTATCTCCTTGCTGTAT 59.630 50.000 0.00 0.00 37.07 2.29
4666 4723 0.667487 TCTTGTTTCTCCGCAGCTCG 60.667 55.000 0.00 0.00 38.08 5.03
4671 4728 0.530744 TTTCTCCGCAGCTCGTATGT 59.469 50.000 5.15 0.00 36.19 2.29
4785 4846 5.414765 ACCAACTTTATTCGTCCAAATCTCC 59.585 40.000 0.00 0.00 0.00 3.71
4786 4847 5.163652 CCAACTTTATTCGTCCAAATCTCCC 60.164 44.000 0.00 0.00 0.00 4.30
4795 4856 4.099573 TCGTCCAAATCTCCCATCTACTTC 59.900 45.833 0.00 0.00 0.00 3.01
4807 4868 7.073853 TCTCCCATCTACTTCCTCACTAGATTA 59.926 40.741 0.00 0.00 0.00 1.75
4813 4874 8.856153 TCTACTTCCTCACTAGATTATAGCTG 57.144 38.462 0.00 0.00 0.00 4.24
5035 5098 0.041684 TCCTGGAGCATCTCTGTCCA 59.958 55.000 0.00 0.00 38.07 4.02
5136 5199 2.046292 CCACCAACCAACCAATCCTTT 58.954 47.619 0.00 0.00 0.00 3.11
5211 5275 3.327600 CACAGTGGAATGTGCCTCA 57.672 52.632 0.00 0.00 43.69 3.86
5362 5426 1.666054 TTTTCGGCACTTGTTACCGT 58.334 45.000 10.50 0.00 46.92 4.83
5368 5432 1.601166 GCACTTGTTACCGTCCCTTT 58.399 50.000 0.00 0.00 0.00 3.11
5435 5503 2.035066 CCTGTGCCTTTGTTTTCTCTGG 59.965 50.000 0.00 0.00 0.00 3.86
5436 5504 2.689983 CTGTGCCTTTGTTTTCTCTGGT 59.310 45.455 0.00 0.00 0.00 4.00
5449 5519 2.359975 CTGGTCGGGAAGCCAACC 60.360 66.667 0.00 0.00 33.93 3.77
5477 5547 2.762327 AGCCACATCTTGCCCTTTTATG 59.238 45.455 0.00 0.00 0.00 1.90
5478 5548 2.497273 GCCACATCTTGCCCTTTTATGT 59.503 45.455 0.00 0.00 0.00 2.29
5479 5549 3.676873 GCCACATCTTGCCCTTTTATGTG 60.677 47.826 0.00 0.00 44.41 3.21
5480 5550 3.511146 CCACATCTTGCCCTTTTATGTGT 59.489 43.478 11.51 0.00 43.68 3.72
5483 5553 4.832266 ACATCTTGCCCTTTTATGTGTTGA 59.168 37.500 0.00 0.00 29.93 3.18
5484 5554 5.047802 ACATCTTGCCCTTTTATGTGTTGAG 60.048 40.000 0.00 0.00 29.93 3.02
5485 5555 4.724399 TCTTGCCCTTTTATGTGTTGAGA 58.276 39.130 0.00 0.00 0.00 3.27
5486 5556 4.761739 TCTTGCCCTTTTATGTGTTGAGAG 59.238 41.667 0.00 0.00 0.00 3.20
5487 5557 2.819608 TGCCCTTTTATGTGTTGAGAGC 59.180 45.455 0.00 0.00 0.00 4.09
5488 5558 2.819608 GCCCTTTTATGTGTTGAGAGCA 59.180 45.455 0.00 0.00 0.00 4.26
5489 5559 3.445096 GCCCTTTTATGTGTTGAGAGCAT 59.555 43.478 0.00 0.00 0.00 3.79
5490 5560 4.439289 GCCCTTTTATGTGTTGAGAGCATC 60.439 45.833 0.00 0.00 0.00 3.91
5491 5561 4.701651 CCCTTTTATGTGTTGAGAGCATCA 59.298 41.667 0.00 0.00 37.82 3.07
5492 5562 5.183713 CCCTTTTATGTGTTGAGAGCATCAA 59.816 40.000 0.59 0.59 45.79 2.57
5501 5571 2.439409 TGAGAGCATCAACAACCATGG 58.561 47.619 11.19 11.19 37.82 3.66
5502 5572 2.224843 TGAGAGCATCAACAACCATGGT 60.225 45.455 13.00 13.00 37.82 3.55
5503 5573 2.821969 GAGAGCATCAACAACCATGGTT 59.178 45.455 24.86 24.86 37.82 3.67
5525 5595 7.230913 TGGTTGACTATTCTACTGCTCTATACC 59.769 40.741 0.00 0.00 0.00 2.73
5571 5645 0.033228 TGGACAAAGCCCATTTTGCG 59.967 50.000 0.00 0.00 40.80 4.85
5577 5651 1.462731 AAGCCCATTTTGCGCACTCA 61.463 50.000 11.12 0.00 0.00 3.41
5581 5655 1.411394 CCATTTTGCGCACTCAACAG 58.589 50.000 11.12 0.15 0.00 3.16
5637 5711 1.608801 GCCTGGACAAAGCCCATTTTG 60.609 52.381 0.00 0.00 42.38 2.44
5673 5747 2.954318 ACAAACTCCATATGGCTGCATC 59.046 45.455 17.58 0.00 34.44 3.91
5674 5748 2.953648 CAAACTCCATATGGCTGCATCA 59.046 45.455 17.58 0.00 34.44 3.07
5782 9259 7.378181 CAAAAGGGCTGACATAAAAACATACT 58.622 34.615 0.00 0.00 0.00 2.12
5783 9260 6.759497 AAGGGCTGACATAAAAACATACTC 57.241 37.500 0.00 0.00 0.00 2.59
5784 9261 5.193679 AGGGCTGACATAAAAACATACTCC 58.806 41.667 0.00 0.00 0.00 3.85
5785 9262 4.338400 GGGCTGACATAAAAACATACTCCC 59.662 45.833 0.00 0.00 0.00 4.30
5787 9264 5.297029 GGCTGACATAAAAACATACTCCCTC 59.703 44.000 0.00 0.00 0.00 4.30
5788 9265 5.297029 GCTGACATAAAAACATACTCCCTCC 59.703 44.000 0.00 0.00 0.00 4.30
5789 9266 5.424757 TGACATAAAAACATACTCCCTCCG 58.575 41.667 0.00 0.00 0.00 4.63
5790 9267 5.046159 TGACATAAAAACATACTCCCTCCGT 60.046 40.000 0.00 0.00 0.00 4.69
5791 9268 5.425630 ACATAAAAACATACTCCCTCCGTC 58.574 41.667 0.00 0.00 0.00 4.79
5792 9269 3.345508 AAAAACATACTCCCTCCGTCC 57.654 47.619 0.00 0.00 0.00 4.79
5793 9270 0.822164 AAACATACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
5794 9271 1.041447 AACATACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
5795 9272 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
5796 9273 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
5797 9274 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
5798 9275 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
5799 9276 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
5800 9277 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
5801 9278 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
5802 9279 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
5803 9280 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
5804 9281 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
5805 9282 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
5806 9283 0.590732 CCGTCCGGAAATACTCGTCG 60.591 60.000 5.23 1.25 37.50 5.12
5807 9284 0.590732 CGTCCGGAAATACTCGTCGG 60.591 60.000 5.23 0.00 41.80 4.79
5808 9285 0.734889 GTCCGGAAATACTCGTCGGA 59.265 55.000 5.23 0.00 46.06 4.55
5809 9286 1.019673 TCCGGAAATACTCGTCGGAG 58.980 55.000 0.00 0.00 43.84 4.63
5810 9287 1.019673 CCGGAAATACTCGTCGGAGA 58.980 55.000 0.00 0.00 43.27 3.71
5811 9288 1.402968 CCGGAAATACTCGTCGGAGAA 59.597 52.381 0.00 0.00 43.27 2.87
5812 9289 2.159338 CCGGAAATACTCGTCGGAGAAA 60.159 50.000 0.00 0.00 43.27 2.52
5813 9290 3.490419 CCGGAAATACTCGTCGGAGAAAT 60.490 47.826 0.00 0.00 43.27 2.17
5814 9291 3.486108 CGGAAATACTCGTCGGAGAAATG 59.514 47.826 0.00 0.00 43.27 2.32
5815 9292 4.679662 GGAAATACTCGTCGGAGAAATGA 58.320 43.478 0.00 0.00 43.27 2.57
5816 9293 5.107133 GGAAATACTCGTCGGAGAAATGAA 58.893 41.667 0.00 0.00 43.27 2.57
5817 9294 5.753921 GGAAATACTCGTCGGAGAAATGAAT 59.246 40.000 0.00 0.00 43.27 2.57
5818 9295 6.292381 GGAAATACTCGTCGGAGAAATGAATG 60.292 42.308 0.00 0.00 43.27 2.67
5819 9296 3.594603 ACTCGTCGGAGAAATGAATGT 57.405 42.857 0.00 0.00 43.27 2.71
5820 9297 4.713824 ACTCGTCGGAGAAATGAATGTA 57.286 40.909 0.00 0.00 43.27 2.29
5821 9298 5.263968 ACTCGTCGGAGAAATGAATGTAT 57.736 39.130 0.00 0.00 43.27 2.29
5822 9299 5.282510 ACTCGTCGGAGAAATGAATGTATC 58.717 41.667 0.00 0.00 43.27 2.24
5823 9300 5.067936 ACTCGTCGGAGAAATGAATGTATCT 59.932 40.000 0.00 0.00 43.27 1.98
5824 9301 6.262496 ACTCGTCGGAGAAATGAATGTATCTA 59.738 38.462 0.00 0.00 43.27 1.98
5825 9302 6.669278 TCGTCGGAGAAATGAATGTATCTAG 58.331 40.000 0.00 0.00 39.69 2.43
5826 9303 6.485648 TCGTCGGAGAAATGAATGTATCTAGA 59.514 38.462 0.00 0.00 39.69 2.43
5827 9304 7.175119 TCGTCGGAGAAATGAATGTATCTAGAT 59.825 37.037 10.73 10.73 39.69 1.98
5828 9305 7.272299 CGTCGGAGAAATGAATGTATCTAGATG 59.728 40.741 15.79 0.00 39.69 2.90
5829 9306 8.085296 GTCGGAGAAATGAATGTATCTAGATGT 58.915 37.037 15.79 0.00 39.69 3.06
5830 9307 9.297037 TCGGAGAAATGAATGTATCTAGATGTA 57.703 33.333 15.79 4.44 0.00 2.29
5870 9347 8.984891 ACATTCATTTTTATGCATTTCTTCGA 57.015 26.923 3.54 0.00 0.00 3.71
5871 9348 8.863049 ACATTCATTTTTATGCATTTCTTCGAC 58.137 29.630 3.54 0.00 0.00 4.20
5872 9349 8.862074 CATTCATTTTTATGCATTTCTTCGACA 58.138 29.630 3.54 0.00 0.00 4.35
5873 9350 8.809159 TTCATTTTTATGCATTTCTTCGACAA 57.191 26.923 3.54 0.00 0.00 3.18
5874 9351 8.451687 TCATTTTTATGCATTTCTTCGACAAG 57.548 30.769 3.54 0.00 0.00 3.16
5875 9352 8.081633 TCATTTTTATGCATTTCTTCGACAAGT 58.918 29.630 3.54 0.00 0.00 3.16
5876 9353 9.340695 CATTTTTATGCATTTCTTCGACAAGTA 57.659 29.630 3.54 0.00 0.00 2.24
5878 9355 9.906660 TTTTTATGCATTTCTTCGACAAGTATT 57.093 25.926 3.54 0.00 0.00 1.89
5879 9356 9.906660 TTTTATGCATTTCTTCGACAAGTATTT 57.093 25.926 3.54 0.00 0.00 1.40
5880 9357 9.906660 TTTATGCATTTCTTCGACAAGTATTTT 57.093 25.926 3.54 0.00 0.00 1.82
5881 9358 9.554724 TTATGCATTTCTTCGACAAGTATTTTC 57.445 29.630 3.54 0.00 0.00 2.29
5882 9359 6.077197 TGCATTTCTTCGACAAGTATTTTCG 58.923 36.000 0.00 0.00 0.00 3.46
5883 9360 5.508224 GCATTTCTTCGACAAGTATTTTCGG 59.492 40.000 0.00 0.00 33.50 4.30
5884 9361 6.619874 GCATTTCTTCGACAAGTATTTTCGGA 60.620 38.462 0.00 0.00 33.50 4.55
5885 9362 5.834239 TTCTTCGACAAGTATTTTCGGAC 57.166 39.130 0.00 0.00 33.50 4.79
5886 9363 3.916172 TCTTCGACAAGTATTTTCGGACG 59.084 43.478 0.00 0.00 33.50 4.79
5887 9364 2.598589 TCGACAAGTATTTTCGGACGG 58.401 47.619 0.00 0.00 33.50 4.79
5888 9365 2.228582 TCGACAAGTATTTTCGGACGGA 59.771 45.455 0.00 0.00 33.50 4.69
5889 9366 2.597305 CGACAAGTATTTTCGGACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
5890 9367 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
5891 9368 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5892 9369 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
5893 9370 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
5894 9371 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
5895 9372 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
5896 9373 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
5897 9374 0.967380 TTTCGGACGGAGGGAGTACC 60.967 60.000 0.00 0.00 40.67 3.34
5898 9375 2.044650 CGGACGGAGGGAGTACCA 60.045 66.667 0.00 0.00 43.89 3.25
5899 9376 1.679977 CGGACGGAGGGAGTACCAA 60.680 63.158 0.00 0.00 43.89 3.67
5900 9377 1.252904 CGGACGGAGGGAGTACCAAA 61.253 60.000 0.00 0.00 43.89 3.28
5901 9378 1.201424 GGACGGAGGGAGTACCAAAT 58.799 55.000 0.00 0.00 43.89 2.32
5902 9379 1.558294 GGACGGAGGGAGTACCAAATT 59.442 52.381 0.00 0.00 43.89 1.82
5903 9380 2.629051 GACGGAGGGAGTACCAAATTG 58.371 52.381 0.00 0.00 43.89 2.32
5904 9381 1.280998 ACGGAGGGAGTACCAAATTGG 59.719 52.381 11.02 11.02 45.02 3.16
5905 9382 1.557832 CGGAGGGAGTACCAAATTGGA 59.442 52.381 20.25 0.00 40.96 3.53
5906 9383 2.679930 CGGAGGGAGTACCAAATTGGAC 60.680 54.545 20.25 12.14 40.96 4.02
5907 9384 2.307686 GGAGGGAGTACCAAATTGGACA 59.692 50.000 20.25 2.86 40.96 4.02
5908 9385 3.053619 GGAGGGAGTACCAAATTGGACAT 60.054 47.826 20.25 3.11 40.96 3.06
5909 9386 4.200092 GAGGGAGTACCAAATTGGACATC 58.800 47.826 20.25 12.00 40.96 3.06
5910 9387 2.943033 GGGAGTACCAAATTGGACATCG 59.057 50.000 20.25 0.00 40.96 3.84
5911 9388 3.370103 GGGAGTACCAAATTGGACATCGA 60.370 47.826 20.25 0.00 40.96 3.59
5912 9389 3.621715 GGAGTACCAAATTGGACATCGAC 59.378 47.826 20.25 6.45 40.96 4.20
5913 9390 4.250464 GAGTACCAAATTGGACATCGACA 58.750 43.478 20.25 0.00 40.96 4.35
5914 9391 4.647611 AGTACCAAATTGGACATCGACAA 58.352 39.130 20.25 0.00 40.96 3.18
5915 9392 5.067273 AGTACCAAATTGGACATCGACAAA 58.933 37.500 20.25 0.00 40.96 2.83
5916 9393 4.927978 ACCAAATTGGACATCGACAAAA 57.072 36.364 20.25 0.00 40.96 2.44
5917 9394 5.467035 ACCAAATTGGACATCGACAAAAT 57.533 34.783 20.25 0.00 40.96 1.82
5918 9395 5.852827 ACCAAATTGGACATCGACAAAATT 58.147 33.333 20.25 0.00 40.96 1.82
5919 9396 6.287525 ACCAAATTGGACATCGACAAAATTT 58.712 32.000 20.25 0.00 40.96 1.82
5920 9397 7.437748 ACCAAATTGGACATCGACAAAATTTA 58.562 30.769 20.25 0.00 40.96 1.40
5921 9398 8.093927 ACCAAATTGGACATCGACAAAATTTAT 58.906 29.630 20.25 0.00 40.96 1.40
5922 9399 8.594687 CCAAATTGGACATCGACAAAATTTATC 58.405 33.333 6.04 0.00 40.96 1.75
5925 9402 6.825944 TGGACATCGACAAAATTTATCCAA 57.174 33.333 0.00 0.00 30.89 3.53
5931 9408 5.474825 TCGACAAAATTTATCCAAAAGGGC 58.525 37.500 0.00 0.00 36.21 5.19
5932 9409 4.629634 CGACAAAATTTATCCAAAAGGGCC 59.370 41.667 0.00 0.00 36.21 5.80
5982 9459 1.674441 GATAAAACAACTAGGCGGGCC 59.326 52.381 0.18 0.18 0.00 5.80
6008 9485 0.868602 CGTCCGTTGTGTCGTTGTCT 60.869 55.000 0.00 0.00 0.00 3.41
6037 9514 2.182827 TGAGATGAGGAACCCTGTCAG 58.817 52.381 0.00 0.00 31.76 3.51
6038 9515 0.908198 AGATGAGGAACCCTGTCAGC 59.092 55.000 0.00 0.00 31.76 4.26
6039 9516 0.460987 GATGAGGAACCCTGTCAGCG 60.461 60.000 0.00 0.00 31.76 5.18
6094 9575 1.228583 TCTCTCCGCCGCCATATCT 60.229 57.895 0.00 0.00 0.00 1.98
6123 9604 1.383523 GCTAGCTTTGCGGATTCCTT 58.616 50.000 7.70 0.00 0.00 3.36
6151 9632 1.017177 GTTGGAGCGCCGATGTGTTA 61.017 55.000 2.29 0.00 36.79 2.41
6160 9641 2.158645 CGCCGATGTGTTATTTGTGACA 59.841 45.455 0.00 0.00 0.00 3.58
6163 9644 4.142708 GCCGATGTGTTATTTGTGACATCA 60.143 41.667 0.00 0.00 43.21 3.07
6181 9663 4.141846 ACATCAACGATGGCATAAGTCTCT 60.142 41.667 0.00 0.00 43.60 3.10
6184 9666 3.895232 ACGATGGCATAAGTCTCTGTT 57.105 42.857 0.00 0.00 0.00 3.16
6196 9678 4.792521 AGTCTCTGTTGAGGTGTATGAC 57.207 45.455 0.00 0.00 40.58 3.06
6265 9748 0.975556 TGGCTCCGGCACAGATCTAA 60.976 55.000 0.00 0.00 40.87 2.10
6274 9757 2.420129 GGCACAGATCTAAATGACCCGT 60.420 50.000 0.00 0.00 0.00 5.28
6286 9769 2.363276 ACCCGTATCCGTGCCTCA 60.363 61.111 0.00 0.00 0.00 3.86
6290 9773 0.389391 CCGTATCCGTGCCTCAATCT 59.611 55.000 0.00 0.00 0.00 2.40
6295 9778 2.825836 CGTGCCTCAATCTGCCCC 60.826 66.667 0.00 0.00 0.00 5.80
6309 9792 4.050934 CCCCGCGCCACCTTTTTC 62.051 66.667 0.00 0.00 0.00 2.29
6310 9793 3.291383 CCCGCGCCACCTTTTTCA 61.291 61.111 0.00 0.00 0.00 2.69
6311 9794 2.635443 CCCGCGCCACCTTTTTCAT 61.635 57.895 0.00 0.00 0.00 2.57
6312 9795 1.154035 CCGCGCCACCTTTTTCATC 60.154 57.895 0.00 0.00 0.00 2.92
6313 9796 1.578926 CGCGCCACCTTTTTCATCA 59.421 52.632 0.00 0.00 0.00 3.07
6314 9797 0.729140 CGCGCCACCTTTTTCATCAC 60.729 55.000 0.00 0.00 0.00 3.06
6315 9798 0.729140 GCGCCACCTTTTTCATCACG 60.729 55.000 0.00 0.00 0.00 4.35
6316 9799 0.591170 CGCCACCTTTTTCATCACGT 59.409 50.000 0.00 0.00 0.00 4.49
6317 9800 1.662876 CGCCACCTTTTTCATCACGTG 60.663 52.381 9.94 9.94 0.00 4.49
6318 9801 1.335872 GCCACCTTTTTCATCACGTGG 60.336 52.381 17.00 0.00 42.95 4.94
6319 9802 1.335872 CCACCTTTTTCATCACGTGGC 60.336 52.381 17.00 0.00 34.83 5.01
6320 9803 1.336440 CACCTTTTTCATCACGTGGCA 59.664 47.619 17.00 0.00 0.00 4.92
6321 9804 2.028130 ACCTTTTTCATCACGTGGCAA 58.972 42.857 17.00 3.12 0.00 4.52
6322 9805 2.223711 ACCTTTTTCATCACGTGGCAAC 60.224 45.455 17.00 0.00 0.00 4.17
6333 9816 2.979676 TGGCAACAGGCGCTGAAG 60.980 61.111 7.64 3.50 46.17 3.02
6334 9817 2.669569 GGCAACAGGCGCTGAAGA 60.670 61.111 7.64 0.00 46.16 2.87
6335 9818 2.260869 GGCAACAGGCGCTGAAGAA 61.261 57.895 7.64 0.00 46.16 2.52
6336 9819 1.654220 GCAACAGGCGCTGAAGAAA 59.346 52.632 7.64 0.00 35.18 2.52
6337 9820 0.030638 GCAACAGGCGCTGAAGAAAA 59.969 50.000 7.64 0.00 35.18 2.29
6338 9821 1.336240 GCAACAGGCGCTGAAGAAAAT 60.336 47.619 7.64 0.00 35.18 1.82
6339 9822 2.095263 GCAACAGGCGCTGAAGAAAATA 60.095 45.455 7.64 0.00 35.18 1.40
6340 9823 3.428045 GCAACAGGCGCTGAAGAAAATAT 60.428 43.478 7.64 0.00 35.18 1.28
6341 9824 4.100529 CAACAGGCGCTGAAGAAAATATG 58.899 43.478 7.64 0.00 35.18 1.78
6342 9825 2.098117 ACAGGCGCTGAAGAAAATATGC 59.902 45.455 7.64 0.00 35.18 3.14
6343 9826 2.097954 CAGGCGCTGAAGAAAATATGCA 59.902 45.455 7.64 0.00 32.44 3.96
6344 9827 2.098117 AGGCGCTGAAGAAAATATGCAC 59.902 45.455 7.64 0.00 0.00 4.57
6345 9828 2.098117 GGCGCTGAAGAAAATATGCACT 59.902 45.455 7.64 0.00 0.00 4.40
6346 9829 3.312421 GGCGCTGAAGAAAATATGCACTA 59.688 43.478 7.64 0.00 0.00 2.74
6347 9830 4.521943 GCGCTGAAGAAAATATGCACTAG 58.478 43.478 0.00 0.00 0.00 2.57
6348 9831 4.271049 GCGCTGAAGAAAATATGCACTAGA 59.729 41.667 0.00 0.00 0.00 2.43
6349 9832 5.557893 GCGCTGAAGAAAATATGCACTAGAG 60.558 44.000 0.00 0.00 0.00 2.43
6350 9833 5.750547 CGCTGAAGAAAATATGCACTAGAGA 59.249 40.000 0.00 0.00 0.00 3.10
6351 9834 6.292061 CGCTGAAGAAAATATGCACTAGAGAC 60.292 42.308 0.00 0.00 0.00 3.36
6352 9835 6.536582 GCTGAAGAAAATATGCACTAGAGACA 59.463 38.462 0.00 0.00 0.00 3.41
6353 9836 7.065085 GCTGAAGAAAATATGCACTAGAGACAA 59.935 37.037 0.00 0.00 0.00 3.18
6354 9837 9.107177 CTGAAGAAAATATGCACTAGAGACAAT 57.893 33.333 0.00 0.00 0.00 2.71
6365 9848 9.672673 ATGCACTAGAGACAATAATAAAGTTGT 57.327 29.630 0.00 0.00 40.97 3.32
6366 9849 9.502091 TGCACTAGAGACAATAATAAAGTTGTT 57.498 29.630 0.00 0.00 38.57 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.886124 GGTAGAAGCGAGCGCACC 60.886 66.667 17.68 11.56 44.88 5.01
12 14 1.102222 AGAGTAGGGCGGTAGAAGCG 61.102 60.000 0.00 0.00 42.73 4.68
16 18 1.516110 AGGTAGAGTAGGGCGGTAGA 58.484 55.000 0.00 0.00 0.00 2.59
25 27 4.246458 GTGAGGTTTGCAAGGTAGAGTAG 58.754 47.826 0.00 0.00 0.00 2.57
60 62 5.129634 TCTTCTTCTCTATCTCATGCTCGT 58.870 41.667 0.00 0.00 0.00 4.18
67 69 7.179160 TGTCCAATGTTCTTCTTCTCTATCTCA 59.821 37.037 0.00 0.00 0.00 3.27
71 73 6.071334 TCGTGTCCAATGTTCTTCTTCTCTAT 60.071 38.462 0.00 0.00 0.00 1.98
86 88 2.105134 TGGGTAAACTGTCGTGTCCAAT 59.895 45.455 0.00 0.00 0.00 3.16
87 89 1.485480 TGGGTAAACTGTCGTGTCCAA 59.515 47.619 0.00 0.00 0.00 3.53
97 99 2.081462 GGTCCGAACATGGGTAAACTG 58.919 52.381 0.00 0.00 0.00 3.16
99 101 1.808343 GTGGTCCGAACATGGGTAAAC 59.192 52.381 0.00 0.00 0.00 2.01
108 110 0.107410 ACTGCAAAGTGGTCCGAACA 60.107 50.000 0.00 0.00 0.00 3.18
109 111 0.307760 CACTGCAAAGTGGTCCGAAC 59.692 55.000 0.00 0.00 36.24 3.95
115 117 2.429250 GGGTTTTACACTGCAAAGTGGT 59.571 45.455 10.49 0.20 43.59 4.16
120 122 4.139038 GGAGTAGGGTTTTACACTGCAAA 58.861 43.478 0.21 0.00 36.65 3.68
125 127 3.248888 AGCAGGAGTAGGGTTTTACACT 58.751 45.455 0.00 0.00 35.11 3.55
137 139 3.244582 TCCTAACCACAAAGCAGGAGTA 58.755 45.455 0.00 0.00 31.76 2.59
138 140 2.054799 TCCTAACCACAAAGCAGGAGT 58.945 47.619 0.00 0.00 31.76 3.85
151 153 2.505819 TCTCCCTCAAGCAATCCTAACC 59.494 50.000 0.00 0.00 0.00 2.85
155 157 3.267812 TGAATTCTCCCTCAAGCAATCCT 59.732 43.478 7.05 0.00 0.00 3.24
166 168 7.180766 TCAAAATTGGCTTATTGAATTCTCCCT 59.819 33.333 7.05 0.00 0.00 4.20
170 172 9.947433 TTCATCAAAATTGGCTTATTGAATTCT 57.053 25.926 7.05 0.00 35.62 2.40
172 174 8.671028 GCTTCATCAAAATTGGCTTATTGAATT 58.329 29.630 0.00 0.00 35.62 2.17
174 176 7.388437 AGCTTCATCAAAATTGGCTTATTGAA 58.612 30.769 0.00 0.00 35.62 2.69
220 223 1.827789 GTTGCAGCCACAAGGGTCA 60.828 57.895 0.00 0.00 45.83 4.02
235 238 3.829886 ACCTGCAAACATGATACGTTG 57.170 42.857 0.00 0.00 0.00 4.10
237 240 5.001232 AGTAAACCTGCAAACATGATACGT 58.999 37.500 0.00 0.00 0.00 3.57
253 256 7.787725 ATCTTCCATTCGATTACAGTAAACC 57.212 36.000 0.00 0.00 0.00 3.27
259 262 6.918569 ACTTCGTATCTTCCATTCGATTACAG 59.081 38.462 0.00 0.00 0.00 2.74
260 263 6.802608 ACTTCGTATCTTCCATTCGATTACA 58.197 36.000 0.00 0.00 0.00 2.41
261 264 7.537991 CCTACTTCGTATCTTCCATTCGATTAC 59.462 40.741 0.00 0.00 0.00 1.89
262 265 7.309012 CCCTACTTCGTATCTTCCATTCGATTA 60.309 40.741 0.00 0.00 0.00 1.75
264 267 5.047943 CCCTACTTCGTATCTTCCATTCGAT 60.048 44.000 0.00 0.00 0.00 3.59
265 268 4.277672 CCCTACTTCGTATCTTCCATTCGA 59.722 45.833 0.00 0.00 0.00 3.71
266 269 4.037684 ACCCTACTTCGTATCTTCCATTCG 59.962 45.833 0.00 0.00 0.00 3.34
267 270 5.532664 ACCCTACTTCGTATCTTCCATTC 57.467 43.478 0.00 0.00 0.00 2.67
268 271 5.952347 AACCCTACTTCGTATCTTCCATT 57.048 39.130 0.00 0.00 0.00 3.16
269 272 5.009410 CGTAACCCTACTTCGTATCTTCCAT 59.991 44.000 0.00 0.00 0.00 3.41
270 273 4.336433 CGTAACCCTACTTCGTATCTTCCA 59.664 45.833 0.00 0.00 0.00 3.53
271 274 4.261363 CCGTAACCCTACTTCGTATCTTCC 60.261 50.000 0.00 0.00 0.00 3.46
272 275 4.791088 GCCGTAACCCTACTTCGTATCTTC 60.791 50.000 0.00 0.00 0.00 2.87
273 276 3.067320 GCCGTAACCCTACTTCGTATCTT 59.933 47.826 0.00 0.00 0.00 2.40
274 277 2.620585 GCCGTAACCCTACTTCGTATCT 59.379 50.000 0.00 0.00 0.00 1.98
275 278 2.358898 TGCCGTAACCCTACTTCGTATC 59.641 50.000 0.00 0.00 0.00 2.24
276 279 2.099756 GTGCCGTAACCCTACTTCGTAT 59.900 50.000 0.00 0.00 0.00 3.06
277 280 1.472480 GTGCCGTAACCCTACTTCGTA 59.528 52.381 0.00 0.00 0.00 3.43
278 281 0.244721 GTGCCGTAACCCTACTTCGT 59.755 55.000 0.00 0.00 0.00 3.85
279 282 0.529378 AGTGCCGTAACCCTACTTCG 59.471 55.000 0.00 0.00 0.00 3.79
280 283 4.099113 AGAATAGTGCCGTAACCCTACTTC 59.901 45.833 0.00 0.00 0.00 3.01
281 284 4.028825 AGAATAGTGCCGTAACCCTACTT 58.971 43.478 0.00 0.00 0.00 2.24
282 285 3.635836 GAGAATAGTGCCGTAACCCTACT 59.364 47.826 0.00 0.00 0.00 2.57
283 286 3.382546 TGAGAATAGTGCCGTAACCCTAC 59.617 47.826 0.00 0.00 0.00 3.18
294 297 3.373439 CAGCCAAGAGTTGAGAATAGTGC 59.627 47.826 0.00 0.00 0.00 4.40
301 304 2.042464 ACTCACAGCCAAGAGTTGAGA 58.958 47.619 3.99 0.00 42.12 3.27
302 305 2.141517 CACTCACAGCCAAGAGTTGAG 58.858 52.381 0.28 0.00 42.87 3.02
313 316 2.103042 GCGTCCATCCACTCACAGC 61.103 63.158 0.00 0.00 0.00 4.40
325 328 1.000506 GTTCTAGTCTTGTGGCGTCCA 59.999 52.381 0.00 0.00 0.00 4.02
335 338 3.511934 AGCGGAGACAATGTTCTAGTCTT 59.488 43.478 0.00 0.00 42.29 3.01
349 352 1.939974 TACAATCATGCAGCGGAGAC 58.060 50.000 0.00 0.00 0.00 3.36
355 358 7.185453 GCTAGCTTATAATACAATCATGCAGC 58.815 38.462 7.70 0.00 0.00 5.25
407 410 4.207891 ACATCGTAGATCCAGTGCTTTT 57.792 40.909 0.00 0.00 45.12 2.27
423 426 8.748380 ACATCACATGTCATAGTATTACATCG 57.252 34.615 6.94 6.29 39.92 3.84
438 441 8.806429 TGAAATACCAAGAATACATCACATGT 57.194 30.769 0.00 0.00 46.92 3.21
483 486 1.279271 GTCAGTCCCTGCACCAATAGT 59.721 52.381 0.00 0.00 0.00 2.12
484 487 1.278985 TGTCAGTCCCTGCACCAATAG 59.721 52.381 0.00 0.00 0.00 1.73
490 493 1.812686 TACCGTGTCAGTCCCTGCAC 61.813 60.000 8.02 8.02 36.20 4.57
495 498 1.445582 CGCTTACCGTGTCAGTCCC 60.446 63.158 0.00 0.00 0.00 4.46
506 509 2.362717 AGCCTGAATCTCTACGCTTACC 59.637 50.000 0.00 0.00 0.00 2.85
507 510 3.551250 GGAGCCTGAATCTCTACGCTTAC 60.551 52.174 0.00 0.00 0.00 2.34
511 514 1.036707 AGGAGCCTGAATCTCTACGC 58.963 55.000 0.00 0.00 0.00 4.42
514 517 5.316183 TCCCTTATAGGAGCCTGAATCTCTA 59.684 44.000 0.00 0.00 37.67 2.43
543 546 3.428870 ACAAGAATCGTTGATGTCACGAC 59.571 43.478 0.00 0.00 38.75 4.34
571 574 5.256474 AGGATCACTTGAACCGAATGAAAT 58.744 37.500 0.00 0.00 41.33 2.17
597 600 2.425312 TGCCGTAAAATGTATTGGCTGG 59.575 45.455 2.48 0.00 42.87 4.85
599 602 3.426963 CGTTGCCGTAAAATGTATTGGCT 60.427 43.478 2.48 0.00 42.87 4.75
610 613 7.542534 AACAATATATTCTCGTTGCCGTAAA 57.457 32.000 0.00 0.00 35.01 2.01
613 616 6.092944 TCAAAACAATATATTCTCGTTGCCGT 59.907 34.615 0.00 0.00 35.01 5.68
614 617 6.482835 TCAAAACAATATATTCTCGTTGCCG 58.517 36.000 0.00 0.00 0.00 5.69
788 822 8.436200 GGCGATGATATAAGTCACTTGATAAAC 58.564 37.037 0.00 0.00 0.00 2.01
801 835 8.993121 GGGTATTATTGATGGCGATGATATAAG 58.007 37.037 0.00 0.00 0.00 1.73
803 837 7.151976 CGGGTATTATTGATGGCGATGATATA 58.848 38.462 0.00 0.00 0.00 0.86
812 846 8.880878 ATTTTTAAACGGGTATTATTGATGGC 57.119 30.769 0.00 0.00 0.00 4.40
852 889 1.678970 GGCCACCACCAAGGATCAC 60.679 63.158 0.00 0.00 41.22 3.06
860 897 1.535930 AATGCATTGGCCACCACCA 60.536 52.632 12.09 0.05 40.13 4.17
861 898 1.218854 GAATGCATTGGCCACCACC 59.781 57.895 18.59 0.00 40.13 4.61
862 899 1.218854 GGAATGCATTGGCCACCAC 59.781 57.895 18.59 0.00 40.13 4.16
968 1007 7.658167 TGGTCTTTACGTGATGTGAGAAATTAA 59.342 33.333 0.00 0.00 0.00 1.40
969 1008 7.156000 TGGTCTTTACGTGATGTGAGAAATTA 58.844 34.615 0.00 0.00 0.00 1.40
970 1009 5.995282 TGGTCTTTACGTGATGTGAGAAATT 59.005 36.000 0.00 0.00 0.00 1.82
971 1010 5.547465 TGGTCTTTACGTGATGTGAGAAAT 58.453 37.500 0.00 0.00 0.00 2.17
973 1012 4.594123 TGGTCTTTACGTGATGTGAGAA 57.406 40.909 0.00 0.00 0.00 2.87
974 1013 4.304110 GTTGGTCTTTACGTGATGTGAGA 58.696 43.478 0.00 0.00 0.00 3.27
975 1014 3.432252 GGTTGGTCTTTACGTGATGTGAG 59.568 47.826 0.00 0.00 0.00 3.51
976 1015 3.395639 GGTTGGTCTTTACGTGATGTGA 58.604 45.455 0.00 0.00 0.00 3.58
977 1016 2.482721 GGGTTGGTCTTTACGTGATGTG 59.517 50.000 0.00 0.00 0.00 3.21
978 1017 2.774687 GGGTTGGTCTTTACGTGATGT 58.225 47.619 0.00 0.00 0.00 3.06
979 1018 1.730064 CGGGTTGGTCTTTACGTGATG 59.270 52.381 0.00 0.00 0.00 3.07
980 1019 1.338389 CCGGGTTGGTCTTTACGTGAT 60.338 52.381 0.00 0.00 0.00 3.06
1006 1045 2.126346 GCACGCATCCAAACCAGC 60.126 61.111 0.00 0.00 0.00 4.85
1007 1046 0.179156 GATGCACGCATCCAAACCAG 60.179 55.000 19.18 0.00 45.06 4.00
1086 1126 1.414866 GGAGGAGGGGAATGCTCTCC 61.415 65.000 13.26 13.26 43.54 3.71
1087 1127 0.692419 TGGAGGAGGGGAATGCTCTC 60.692 60.000 0.00 0.00 37.75 3.20
1088 1128 0.253347 TTGGAGGAGGGGAATGCTCT 60.253 55.000 0.00 0.00 37.75 4.09
1089 1129 0.106967 GTTGGAGGAGGGGAATGCTC 60.107 60.000 0.00 0.00 36.96 4.26
1090 1130 1.575447 GGTTGGAGGAGGGGAATGCT 61.575 60.000 0.00 0.00 0.00 3.79
1091 1131 1.076705 GGTTGGAGGAGGGGAATGC 60.077 63.158 0.00 0.00 0.00 3.56
1372 1415 1.877576 TACTGCAGACTCCGCACCAG 61.878 60.000 23.35 0.00 35.08 4.00
1394 1437 1.300697 CTAACCTATGGACGCCGCC 60.301 63.158 0.00 0.00 0.00 6.13
1523 1566 3.793144 CCGCTGAGTTCTTGCCGC 61.793 66.667 0.00 0.00 0.00 6.53
1565 1608 1.993391 GTCCCGATTCCTCCACCCA 60.993 63.158 0.00 0.00 0.00 4.51
1602 1645 1.544724 GGACAGCACCAAAATGGCTA 58.455 50.000 0.00 0.00 42.67 3.93
1604 1647 1.080569 CGGACAGCACCAAAATGGC 60.081 57.895 0.00 0.00 42.67 4.40
1667 1710 2.586258 AGTAGTTACTGCATCTGCCG 57.414 50.000 2.94 0.00 41.18 5.69
1782 1825 0.681243 GGCAAGGGGGCACTAGAAAG 60.681 60.000 0.00 0.00 42.77 2.62
1783 1826 1.382629 GGCAAGGGGGCACTAGAAA 59.617 57.895 0.00 0.00 42.77 2.52
1784 1827 3.087065 GGCAAGGGGGCACTAGAA 58.913 61.111 0.00 0.00 42.77 2.10
1791 1834 3.004946 AAGCAATGGCAAGGGGGC 61.005 61.111 0.00 0.00 44.61 5.80
1792 1835 1.482748 AACAAGCAATGGCAAGGGGG 61.483 55.000 0.00 0.00 44.61 5.40
1793 1836 0.320946 CAACAAGCAATGGCAAGGGG 60.321 55.000 0.00 0.00 44.61 4.79
1794 1837 0.952010 GCAACAAGCAATGGCAAGGG 60.952 55.000 0.00 0.00 44.61 3.95
1795 1838 2.535588 GCAACAAGCAATGGCAAGG 58.464 52.632 0.00 0.00 44.61 3.61
1834 1891 1.074405 TCCAGCCAGATTTGTTGAGCT 59.926 47.619 0.00 0.00 0.00 4.09
1865 1922 1.203052 CACAACTAATGCTGGCTTGGG 59.797 52.381 0.00 0.00 0.00 4.12
1895 1952 1.679139 CAACCTTGCTCAACCAGACA 58.321 50.000 0.00 0.00 0.00 3.41
1922 1979 3.201726 AGCCGACGAAATCAACAAATG 57.798 42.857 0.00 0.00 0.00 2.32
1923 1980 3.915437 AAGCCGACGAAATCAACAAAT 57.085 38.095 0.00 0.00 0.00 2.32
1938 1995 4.742438 TCAAAGCTACTAAACAAAGCCG 57.258 40.909 0.00 0.00 36.92 5.52
2047 2104 2.607750 TGCTCCACCACCTCCTCC 60.608 66.667 0.00 0.00 0.00 4.30
2197 2254 3.047877 GGGAACCGAAGCACCACG 61.048 66.667 0.00 0.00 40.86 4.94
2542 2599 4.450082 TCTAGATGCACGCAGAAACTAA 57.550 40.909 0.00 0.00 0.00 2.24
2578 2635 8.196771 GCATTTCATATTTCAATACCTCACCAA 58.803 33.333 0.00 0.00 0.00 3.67
2650 2707 5.957842 TCAAACAAGTAATAACTGGCAGG 57.042 39.130 20.34 0.58 35.62 4.85
2666 2723 2.305635 TGCTGGATCTAGGCTTCAAACA 59.694 45.455 8.31 0.00 0.00 2.83
2762 2819 1.602311 GCTCATGCAATTCGGGAGAT 58.398 50.000 0.00 0.00 37.74 2.75
2824 2881 7.618117 TGGACAGAACATCAGGATAACTAACTA 59.382 37.037 0.00 0.00 0.00 2.24
3390 3447 1.227383 CCTCCAAATTAGGGGCGCT 59.773 57.895 7.64 9.68 0.00 5.92
3503 3560 0.324645 AAGCATCCCAAAAGCCCGAT 60.325 50.000 0.00 0.00 0.00 4.18
3524 3581 0.968405 TGAATGGAAGGCACAAAGGC 59.032 50.000 0.00 0.00 44.61 4.35
3608 3665 3.949754 GGCTGATCATTTTGGTGAGATCA 59.050 43.478 0.00 0.00 43.14 2.92
3831 3888 2.755655 CCCGGCGATATAGAAGTCTGAT 59.244 50.000 9.30 0.00 0.00 2.90
3948 4005 6.096987 AGTTCTTAGCTATAGTAAGCAGTGCA 59.903 38.462 19.20 0.00 45.30 4.57
3990 4047 4.867608 GGCTCAAGAATACAGAGTCTGAAC 59.132 45.833 26.86 13.30 35.18 3.18
4332 4389 2.564062 CCCCTTTTCTGTGACATTGCAT 59.436 45.455 0.00 0.00 0.00 3.96
4410 4467 5.691896 TCATCCATTTCATTGCTCTCATCT 58.308 37.500 0.00 0.00 0.00 2.90
4431 4488 1.679981 TGGGGATTCCATGGTTCTCA 58.320 50.000 12.58 9.89 41.46 3.27
4598 4655 7.930217 TCTTCAAACAAACAAGATACCTTCTG 58.070 34.615 0.00 0.00 33.93 3.02
4631 4688 6.976925 AGAAACAAGAGAATGCAACTTCAAAG 59.023 34.615 3.04 0.00 0.00 2.77
4648 4705 0.946221 ACGAGCTGCGGAGAAACAAG 60.946 55.000 8.65 0.00 46.49 3.16
4666 4723 8.208718 TGCACAACATATTTAGAGGAACATAC 57.791 34.615 0.00 0.00 0.00 2.39
4671 4728 5.651576 TGCATGCACAACATATTTAGAGGAA 59.348 36.000 18.46 0.00 36.64 3.36
4785 4846 8.682710 GCTATAATCTAGTGAGGAAGTAGATGG 58.317 40.741 3.98 0.00 46.59 3.51
4786 4847 9.461312 AGCTATAATCTAGTGAGGAAGTAGATG 57.539 37.037 3.98 0.00 46.59 2.90
4795 4856 5.973899 TGAGCAGCTATAATCTAGTGAGG 57.026 43.478 0.00 0.00 0.00 3.86
4807 4868 3.672808 GGCACTATGATTGAGCAGCTAT 58.327 45.455 0.00 0.00 0.00 2.97
4813 4874 0.855349 CGTCGGCACTATGATTGAGC 59.145 55.000 0.00 0.00 0.00 4.26
4839 4900 4.133013 TCATGCGATATATCAGCAGCAT 57.867 40.909 25.33 20.97 44.85 3.79
4841 4902 5.924825 TCATATCATGCGATATATCAGCAGC 59.075 40.000 25.33 16.30 41.94 5.25
4854 4915 2.947652 GGAATGGGGATCATATCATGCG 59.052 50.000 0.00 0.00 34.44 4.73
4938 5001 0.106708 GACTTGCCACTGTCCACAGA 59.893 55.000 13.75 0.00 46.59 3.41
5136 5199 7.607991 CAGCATAGTAGAGGAAAAAGGAAAAGA 59.392 37.037 0.00 0.00 0.00 2.52
5384 5450 2.860293 GTCCGGACGCACACAATG 59.140 61.111 20.85 0.00 0.00 2.82
5422 5488 3.211045 CTTCCCGACCAGAGAAAACAAA 58.789 45.455 0.00 0.00 0.00 2.83
5435 5503 0.526211 GATTTGGTTGGCTTCCCGAC 59.474 55.000 0.00 0.00 43.73 4.79
5436 5504 0.111446 TGATTTGGTTGGCTTCCCGA 59.889 50.000 0.00 0.00 0.00 5.14
5480 5550 2.821378 CCATGGTTGTTGATGCTCTCAA 59.179 45.455 2.57 0.00 41.61 3.02
5483 5553 2.592102 ACCATGGTTGTTGATGCTCT 57.408 45.000 13.00 0.00 0.00 4.09
5494 5564 5.045578 AGCAGTAGAATAGTCAACCATGGTT 60.046 40.000 24.86 24.86 39.13 3.67
5495 5565 4.471386 AGCAGTAGAATAGTCAACCATGGT 59.529 41.667 13.00 13.00 0.00 3.55
5496 5566 5.028549 AGCAGTAGAATAGTCAACCATGG 57.971 43.478 11.19 11.19 0.00 3.66
5497 5567 5.911752 AGAGCAGTAGAATAGTCAACCATG 58.088 41.667 0.00 0.00 0.00 3.66
5498 5568 7.847711 ATAGAGCAGTAGAATAGTCAACCAT 57.152 36.000 0.00 0.00 0.00 3.55
5499 5569 7.230913 GGTATAGAGCAGTAGAATAGTCAACCA 59.769 40.741 0.00 0.00 0.00 3.67
5500 5570 7.230913 TGGTATAGAGCAGTAGAATAGTCAACC 59.769 40.741 0.00 0.00 0.00 3.77
5501 5571 8.077386 GTGGTATAGAGCAGTAGAATAGTCAAC 58.923 40.741 0.00 0.00 32.58 3.18
5502 5572 7.999545 AGTGGTATAGAGCAGTAGAATAGTCAA 59.000 37.037 0.00 0.00 34.92 3.18
5503 5573 7.519057 AGTGGTATAGAGCAGTAGAATAGTCA 58.481 38.462 0.00 0.00 34.92 3.41
5504 5574 7.120138 GGAGTGGTATAGAGCAGTAGAATAGTC 59.880 44.444 0.00 0.00 36.85 2.59
5505 5575 6.943718 GGAGTGGTATAGAGCAGTAGAATAGT 59.056 42.308 0.00 0.00 36.85 2.12
5506 5576 6.092944 CGGAGTGGTATAGAGCAGTAGAATAG 59.907 46.154 0.00 0.00 36.85 1.73
5507 5577 5.938710 CGGAGTGGTATAGAGCAGTAGAATA 59.061 44.000 0.00 0.00 36.85 1.75
5508 5578 4.762765 CGGAGTGGTATAGAGCAGTAGAAT 59.237 45.833 0.00 0.00 36.85 2.40
5509 5579 4.135306 CGGAGTGGTATAGAGCAGTAGAA 58.865 47.826 0.00 0.00 36.85 2.10
5510 5580 3.496337 CCGGAGTGGTATAGAGCAGTAGA 60.496 52.174 0.00 0.00 36.85 2.59
5511 5581 2.814919 CCGGAGTGGTATAGAGCAGTAG 59.185 54.545 0.00 0.00 36.85 2.57
5512 5582 2.860009 CCGGAGTGGTATAGAGCAGTA 58.140 52.381 0.00 0.00 36.85 2.74
5513 5583 1.693627 CCGGAGTGGTATAGAGCAGT 58.306 55.000 0.00 0.00 39.46 4.40
5514 5584 0.315568 GCCGGAGTGGTATAGAGCAG 59.684 60.000 5.05 0.00 41.21 4.24
5571 5645 0.249031 GGTTTGTGGCTGTTGAGTGC 60.249 55.000 0.00 0.00 0.00 4.40
5577 5651 2.178580 CATATGGGGTTTGTGGCTGTT 58.821 47.619 0.00 0.00 0.00 3.16
5581 5655 1.111277 GTCCATATGGGGTTTGTGGC 58.889 55.000 21.78 0.00 37.22 5.01
5637 5711 1.065551 GTTTGTGGTTGTGGAGTGAGC 59.934 52.381 0.00 0.00 0.00 4.26
5782 9259 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
5783 9260 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
5784 9261 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
5785 9262 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
5787 9264 0.590732 CGACGAGTATTTCCGGACGG 60.591 60.000 1.83 3.96 0.00 4.79
5788 9265 0.590732 CCGACGAGTATTTCCGGACG 60.591 60.000 1.83 5.89 42.49 4.79
5789 9266 0.734889 TCCGACGAGTATTTCCGGAC 59.265 55.000 1.83 0.00 43.47 4.79
5790 9267 1.019673 CTCCGACGAGTATTTCCGGA 58.980 55.000 0.00 0.00 45.74 5.14
5791 9268 1.019673 TCTCCGACGAGTATTTCCGG 58.980 55.000 0.00 0.00 41.36 5.14
5792 9269 2.838386 TTCTCCGACGAGTATTTCCG 57.162 50.000 0.00 0.00 37.40 4.30
5793 9270 4.679662 TCATTTCTCCGACGAGTATTTCC 58.320 43.478 0.00 0.00 37.40 3.13
5794 9271 6.255887 ACATTCATTTCTCCGACGAGTATTTC 59.744 38.462 0.00 0.00 37.40 2.17
5795 9272 6.106673 ACATTCATTTCTCCGACGAGTATTT 58.893 36.000 0.00 0.00 37.40 1.40
5796 9273 5.661458 ACATTCATTTCTCCGACGAGTATT 58.339 37.500 0.00 0.00 37.40 1.89
5797 9274 5.263968 ACATTCATTTCTCCGACGAGTAT 57.736 39.130 0.00 0.00 37.40 2.12
5798 9275 4.713824 ACATTCATTTCTCCGACGAGTA 57.286 40.909 0.00 0.00 37.40 2.59
5799 9276 3.594603 ACATTCATTTCTCCGACGAGT 57.405 42.857 0.00 0.00 37.40 4.18
5800 9277 5.524284 AGATACATTCATTTCTCCGACGAG 58.476 41.667 0.00 0.00 37.48 4.18
5801 9278 5.515797 AGATACATTCATTTCTCCGACGA 57.484 39.130 0.00 0.00 0.00 4.20
5802 9279 6.669278 TCTAGATACATTCATTTCTCCGACG 58.331 40.000 0.00 0.00 0.00 5.12
5803 9280 8.085296 ACATCTAGATACATTCATTTCTCCGAC 58.915 37.037 4.54 0.00 0.00 4.79
5804 9281 8.183104 ACATCTAGATACATTCATTTCTCCGA 57.817 34.615 4.54 0.00 0.00 4.55
5845 9322 8.863049 GTCGAAGAAATGCATAAAAATGAATGT 58.137 29.630 0.00 0.00 39.69 2.71
5846 9323 8.862074 TGTCGAAGAAATGCATAAAAATGAATG 58.138 29.630 0.00 0.00 39.69 2.67
5847 9324 8.984891 TGTCGAAGAAATGCATAAAAATGAAT 57.015 26.923 0.00 0.00 39.69 2.57
5848 9325 8.809159 TTGTCGAAGAAATGCATAAAAATGAA 57.191 26.923 0.00 0.00 39.69 2.57
5849 9326 8.081633 ACTTGTCGAAGAAATGCATAAAAATGA 58.918 29.630 0.00 0.00 39.69 2.57
5850 9327 8.231304 ACTTGTCGAAGAAATGCATAAAAATG 57.769 30.769 0.00 0.00 39.69 2.32
5852 9329 9.906660 AATACTTGTCGAAGAAATGCATAAAAA 57.093 25.926 0.00 0.00 39.69 1.94
5853 9330 9.906660 AAATACTTGTCGAAGAAATGCATAAAA 57.093 25.926 0.00 0.00 39.69 1.52
5854 9331 9.906660 AAAATACTTGTCGAAGAAATGCATAAA 57.093 25.926 0.00 0.00 39.69 1.40
5855 9332 9.554724 GAAAATACTTGTCGAAGAAATGCATAA 57.445 29.630 0.00 0.00 39.69 1.90
5856 9333 7.902917 CGAAAATACTTGTCGAAGAAATGCATA 59.097 33.333 0.00 0.00 39.69 3.14
5857 9334 6.742718 CGAAAATACTTGTCGAAGAAATGCAT 59.257 34.615 0.00 0.00 39.69 3.96
5858 9335 6.077197 CGAAAATACTTGTCGAAGAAATGCA 58.923 36.000 0.00 0.00 39.69 3.96
5859 9336 5.508224 CCGAAAATACTTGTCGAAGAAATGC 59.492 40.000 1.13 0.00 39.69 3.56
5860 9337 6.736853 GTCCGAAAATACTTGTCGAAGAAATG 59.263 38.462 1.13 0.00 39.69 2.32
5861 9338 6.400727 CGTCCGAAAATACTTGTCGAAGAAAT 60.401 38.462 1.13 0.00 39.69 2.17
5862 9339 5.107760 CGTCCGAAAATACTTGTCGAAGAAA 60.108 40.000 1.13 0.00 39.69 2.52
5863 9340 4.383649 CGTCCGAAAATACTTGTCGAAGAA 59.616 41.667 1.13 0.00 39.69 2.52
5864 9341 3.916172 CGTCCGAAAATACTTGTCGAAGA 59.084 43.478 1.13 0.00 36.92 2.87
5865 9342 3.060363 CCGTCCGAAAATACTTGTCGAAG 59.940 47.826 1.13 0.00 36.92 3.79
5866 9343 2.988493 CCGTCCGAAAATACTTGTCGAA 59.012 45.455 1.13 0.00 36.92 3.71
5867 9344 2.228582 TCCGTCCGAAAATACTTGTCGA 59.771 45.455 1.13 0.00 36.92 4.20
5868 9345 2.597305 CTCCGTCCGAAAATACTTGTCG 59.403 50.000 0.00 0.00 34.58 4.35
5869 9346 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5870 9347 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5871 9348 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5872 9349 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
5873 9350 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
5874 9351 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
5875 9352 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
5876 9353 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
5877 9354 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
5878 9355 0.967380 GGTACTCCCTCCGTCCGAAA 60.967 60.000 0.00 0.00 0.00 3.46
5879 9356 1.379044 GGTACTCCCTCCGTCCGAA 60.379 63.158 0.00 0.00 0.00 4.30
5880 9357 2.141011 TTGGTACTCCCTCCGTCCGA 62.141 60.000 0.00 0.00 0.00 4.55
5881 9358 1.252904 TTTGGTACTCCCTCCGTCCG 61.253 60.000 0.00 0.00 0.00 4.79
5882 9359 1.201424 ATTTGGTACTCCCTCCGTCC 58.799 55.000 0.00 0.00 0.00 4.79
5883 9360 2.629051 CAATTTGGTACTCCCTCCGTC 58.371 52.381 0.00 0.00 0.00 4.79
5884 9361 1.280998 CCAATTTGGTACTCCCTCCGT 59.719 52.381 7.31 0.00 31.35 4.69
5885 9362 1.557832 TCCAATTTGGTACTCCCTCCG 59.442 52.381 14.98 0.00 39.03 4.63
5886 9363 2.307686 TGTCCAATTTGGTACTCCCTCC 59.692 50.000 14.98 0.00 39.03 4.30
5887 9364 3.713826 TGTCCAATTTGGTACTCCCTC 57.286 47.619 14.98 0.00 39.03 4.30
5888 9365 3.370527 CGATGTCCAATTTGGTACTCCCT 60.371 47.826 14.98 0.90 39.03 4.20
5889 9366 2.943033 CGATGTCCAATTTGGTACTCCC 59.057 50.000 14.98 5.53 39.03 4.30
5890 9367 3.621715 GTCGATGTCCAATTTGGTACTCC 59.378 47.826 14.98 7.40 39.03 3.85
5891 9368 4.250464 TGTCGATGTCCAATTTGGTACTC 58.750 43.478 14.98 8.95 39.03 2.59
5892 9369 4.280436 TGTCGATGTCCAATTTGGTACT 57.720 40.909 14.98 1.23 39.03 2.73
5893 9370 5.365403 TTTGTCGATGTCCAATTTGGTAC 57.635 39.130 14.98 11.89 39.03 3.34
5894 9371 6.582677 ATTTTGTCGATGTCCAATTTGGTA 57.417 33.333 14.98 6.48 39.03 3.25
5895 9372 4.927978 TTTTGTCGATGTCCAATTTGGT 57.072 36.364 14.98 0.00 39.03 3.67
5896 9373 6.783892 AAATTTTGTCGATGTCCAATTTGG 57.216 33.333 9.28 9.28 39.43 3.28
5897 9374 8.594687 GGATAAATTTTGTCGATGTCCAATTTG 58.405 33.333 0.00 0.00 0.00 2.32
5898 9375 8.310382 TGGATAAATTTTGTCGATGTCCAATTT 58.690 29.630 0.00 0.00 30.86 1.82
5899 9376 7.835822 TGGATAAATTTTGTCGATGTCCAATT 58.164 30.769 0.00 0.00 30.86 2.32
5900 9377 7.403312 TGGATAAATTTTGTCGATGTCCAAT 57.597 32.000 0.00 0.00 30.86 3.16
5901 9378 6.825944 TGGATAAATTTTGTCGATGTCCAA 57.174 33.333 0.00 0.00 30.86 3.53
5902 9379 6.825944 TTGGATAAATTTTGTCGATGTCCA 57.174 33.333 0.00 0.00 0.00 4.02
5903 9380 7.275560 CCTTTTGGATAAATTTTGTCGATGTCC 59.724 37.037 0.00 0.00 44.07 4.02
5904 9381 7.275560 CCCTTTTGGATAAATTTTGTCGATGTC 59.724 37.037 0.00 0.00 44.07 3.06
5905 9382 7.096551 CCCTTTTGGATAAATTTTGTCGATGT 58.903 34.615 0.00 0.00 44.07 3.06
5906 9383 6.035975 GCCCTTTTGGATAAATTTTGTCGATG 59.964 38.462 0.00 0.00 44.07 3.84
5907 9384 6.106003 GCCCTTTTGGATAAATTTTGTCGAT 58.894 36.000 0.00 0.00 44.07 3.59
5908 9385 5.474825 GCCCTTTTGGATAAATTTTGTCGA 58.525 37.500 0.00 0.00 44.07 4.20
5909 9386 4.629634 GGCCCTTTTGGATAAATTTTGTCG 59.370 41.667 0.00 0.00 44.07 4.35
5910 9387 4.629634 CGGCCCTTTTGGATAAATTTTGTC 59.370 41.667 0.00 0.00 44.07 3.18
5911 9388 4.284746 TCGGCCCTTTTGGATAAATTTTGT 59.715 37.500 0.00 0.00 44.07 2.83
5912 9389 4.629634 GTCGGCCCTTTTGGATAAATTTTG 59.370 41.667 0.00 0.00 44.07 2.44
5913 9390 4.284746 TGTCGGCCCTTTTGGATAAATTTT 59.715 37.500 0.00 0.00 44.07 1.82
5914 9391 3.835395 TGTCGGCCCTTTTGGATAAATTT 59.165 39.130 0.00 0.00 44.07 1.82
5915 9392 3.436243 TGTCGGCCCTTTTGGATAAATT 58.564 40.909 0.00 0.00 44.07 1.82
5916 9393 3.023832 CTGTCGGCCCTTTTGGATAAAT 58.976 45.455 0.00 0.00 44.07 1.40
5917 9394 2.040545 TCTGTCGGCCCTTTTGGATAAA 59.959 45.455 0.00 0.00 44.07 1.40
5918 9395 1.631388 TCTGTCGGCCCTTTTGGATAA 59.369 47.619 0.00 0.00 44.07 1.75
5919 9396 1.209504 CTCTGTCGGCCCTTTTGGATA 59.790 52.381 0.00 0.00 44.07 2.59
5920 9397 0.035056 CTCTGTCGGCCCTTTTGGAT 60.035 55.000 0.00 0.00 44.07 3.41
5921 9398 1.374947 CTCTGTCGGCCCTTTTGGA 59.625 57.895 0.00 0.00 44.07 3.53
5922 9399 0.537371 AACTCTGTCGGCCCTTTTGG 60.537 55.000 0.00 0.00 39.97 3.28
5925 9402 2.943036 TTAAACTCTGTCGGCCCTTT 57.057 45.000 0.00 0.00 0.00 3.11
5993 9470 0.852777 CCTCAGACAACGACACAACG 59.147 55.000 0.00 0.00 39.31 4.10
5994 9471 2.128035 CTCCTCAGACAACGACACAAC 58.872 52.381 0.00 0.00 0.00 3.32
5995 9472 1.068588 CCTCCTCAGACAACGACACAA 59.931 52.381 0.00 0.00 0.00 3.33
6008 9485 3.303938 GTTCCTCATCTCATCCTCCTCA 58.696 50.000 0.00 0.00 0.00 3.86
6045 9522 1.571460 GTGGCAGAGCAGAACAACG 59.429 57.895 0.00 0.00 0.00 4.10
6046 9523 0.880278 TCGTGGCAGAGCAGAACAAC 60.880 55.000 0.00 0.00 0.00 3.32
6047 9524 0.601046 CTCGTGGCAGAGCAGAACAA 60.601 55.000 0.00 0.00 0.00 2.83
6048 9525 1.005748 CTCGTGGCAGAGCAGAACA 60.006 57.895 0.00 0.00 0.00 3.18
6049 9526 3.867771 CTCGTGGCAGAGCAGAAC 58.132 61.111 0.00 0.00 0.00 3.01
6094 9575 0.790207 CAAAGCTAGCGCGACAGAAA 59.210 50.000 12.10 0.00 42.32 2.52
6151 9632 2.819019 TGCCATCGTTGATGTCACAAAT 59.181 40.909 6.10 0.00 38.28 2.32
6160 9641 4.141846 ACAGAGACTTATGCCATCGTTGAT 60.142 41.667 0.00 0.00 0.00 2.57
6163 9644 3.895232 ACAGAGACTTATGCCATCGTT 57.105 42.857 0.00 0.00 0.00 3.85
6181 9663 1.337728 CGGCAGTCATACACCTCAACA 60.338 52.381 0.00 0.00 0.00 3.33
6184 9666 0.613572 TCCGGCAGTCATACACCTCA 60.614 55.000 0.00 0.00 0.00 3.86
6216 9699 1.398390 GGCTTAGACAACAATGAGGCG 59.602 52.381 0.00 0.00 0.00 5.52
6246 9729 0.975556 TTAGATCTGTGCCGGAGCCA 60.976 55.000 5.05 0.00 38.69 4.75
6274 9757 0.106708 GGCAGATTGAGGCACGGATA 59.893 55.000 0.00 0.00 0.00 2.59
6295 9778 0.729140 GTGATGAAAAAGGTGGCGCG 60.729 55.000 0.00 0.00 0.00 6.86
6301 9784 1.686355 TGCCACGTGATGAAAAAGGT 58.314 45.000 19.30 0.00 0.00 3.50
6302 9785 2.223688 TGTTGCCACGTGATGAAAAAGG 60.224 45.455 19.30 0.00 0.00 3.11
6303 9786 3.044986 CTGTTGCCACGTGATGAAAAAG 58.955 45.455 19.30 2.50 0.00 2.27
6304 9787 2.223688 CCTGTTGCCACGTGATGAAAAA 60.224 45.455 19.30 0.00 0.00 1.94
6305 9788 1.336440 CCTGTTGCCACGTGATGAAAA 59.664 47.619 19.30 0.46 0.00 2.29
6306 9789 0.950836 CCTGTTGCCACGTGATGAAA 59.049 50.000 19.30 0.00 0.00 2.69
6307 9790 1.514678 GCCTGTTGCCACGTGATGAA 61.515 55.000 19.30 3.30 0.00 2.57
6308 9791 1.965930 GCCTGTTGCCACGTGATGA 60.966 57.895 19.30 0.00 0.00 2.92
6309 9792 2.562912 GCCTGTTGCCACGTGATG 59.437 61.111 19.30 1.58 0.00 3.07
6310 9793 3.049674 CGCCTGTTGCCACGTGAT 61.050 61.111 19.30 0.00 36.24 3.06
6315 9798 3.259425 CTTCAGCGCCTGTTGCCAC 62.259 63.158 2.29 0.00 36.24 5.01
6316 9799 2.956799 TTCTTCAGCGCCTGTTGCCA 62.957 55.000 2.29 0.00 36.24 4.92
6317 9800 1.795170 TTTCTTCAGCGCCTGTTGCC 61.795 55.000 2.29 0.00 36.24 4.52
6318 9801 0.030638 TTTTCTTCAGCGCCTGTTGC 59.969 50.000 2.29 0.00 32.61 4.17
6319 9802 2.712057 ATTTTCTTCAGCGCCTGTTG 57.288 45.000 2.29 0.00 32.61 3.33
6320 9803 3.428045 GCATATTTTCTTCAGCGCCTGTT 60.428 43.478 2.29 0.00 32.61 3.16
6321 9804 2.098117 GCATATTTTCTTCAGCGCCTGT 59.902 45.455 2.29 0.00 32.61 4.00
6322 9805 2.097954 TGCATATTTTCTTCAGCGCCTG 59.902 45.455 2.29 1.50 0.00 4.85
6323 9806 2.098117 GTGCATATTTTCTTCAGCGCCT 59.902 45.455 2.29 0.00 0.00 5.52
6324 9807 2.098117 AGTGCATATTTTCTTCAGCGCC 59.902 45.455 2.29 0.00 33.33 6.53
6325 9808 3.411415 AGTGCATATTTTCTTCAGCGC 57.589 42.857 0.00 0.00 0.00 5.92
6326 9809 5.750547 TCTCTAGTGCATATTTTCTTCAGCG 59.249 40.000 0.00 0.00 0.00 5.18
6327 9810 6.536582 TGTCTCTAGTGCATATTTTCTTCAGC 59.463 38.462 0.00 0.00 0.00 4.26
6328 9811 8.484641 TTGTCTCTAGTGCATATTTTCTTCAG 57.515 34.615 0.00 0.00 0.00 3.02
6339 9822 9.672673 ACAACTTTATTATTGTCTCTAGTGCAT 57.327 29.630 0.00 0.00 33.80 3.96
6340 9823 9.502091 AACAACTTTATTATTGTCTCTAGTGCA 57.498 29.630 0.00 0.00 38.08 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.