Multiple sequence alignment - TraesCS2A01G286100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G286100 chr2A 100.000 2889 0 0 1 2889 485778299 485781187 0.000000e+00 5336.0
1 TraesCS2A01G286100 chr2A 88.038 209 13 2 2660 2856 754444816 754444608 1.340000e-58 237.0
2 TraesCS2A01G286100 chr2A 94.783 115 4 2 1558 1671 82351572 82351685 8.230000e-41 178.0
3 TraesCS2A01G286100 chr2A 94.017 117 7 0 1565 1681 753988007 753988123 8.230000e-41 178.0
4 TraesCS2A01G286100 chr2B 89.182 1479 111 18 102 1566 429181742 429180299 0.000000e+00 1799.0
5 TraesCS2A01G286100 chr2B 95.864 411 14 3 2099 2508 429165009 429164601 0.000000e+00 662.0
6 TraesCS2A01G286100 chr2B 89.676 339 18 7 1673 2008 429180300 429179976 1.600000e-112 416.0
7 TraesCS2A01G286100 chr2B 92.233 103 3 3 2001 2099 429179788 429179687 1.080000e-29 141.0
8 TraesCS2A01G286100 chr2D 95.730 562 24 0 1005 1566 360480048 360480609 0.000000e+00 905.0
9 TraesCS2A01G286100 chr2D 88.872 665 24 13 1683 2318 360480623 360481266 0.000000e+00 773.0
10 TraesCS2A01G286100 chr2D 90.909 264 12 6 709 970 360479794 360480047 7.660000e-91 344.0
11 TraesCS2A01G286100 chr2D 89.888 178 17 1 2660 2836 337919401 337919578 8.050000e-56 228.0
12 TraesCS2A01G286100 chr2D 80.000 295 45 7 397 689 360479304 360479586 3.770000e-49 206.0
13 TraesCS2A01G286100 chr2D 75.786 318 55 13 94 394 360478120 360478432 1.080000e-29 141.0
14 TraesCS2A01G286100 chr2D 87.903 124 9 3 2310 2433 360481687 360481804 1.080000e-29 141.0
15 TraesCS2A01G286100 chr2D 84.404 109 16 1 2559 2667 337919227 337919334 3.940000e-19 106.0
16 TraesCS2A01G286100 chr2D 85.057 87 13 0 2567 2653 112305363 112305449 3.970000e-14 89.8
17 TraesCS2A01G286100 chr6B 90.909 220 16 2 2660 2875 278288398 278288617 2.820000e-75 292.0
18 TraesCS2A01G286100 chr6B 76.705 176 34 6 2497 2667 52820846 52821019 1.100000e-14 91.6
19 TraesCS2A01G286100 chr3A 88.462 234 22 3 2660 2889 441190780 441191012 7.880000e-71 278.0
20 TraesCS2A01G286100 chr3A 87.912 182 19 2 2672 2850 690888638 690888457 8.110000e-51 211.0
21 TraesCS2A01G286100 chr3A 93.333 120 7 1 1565 1683 336604641 336604522 2.960000e-40 176.0
22 TraesCS2A01G286100 chr6D 85.652 230 26 4 2664 2889 155246935 155247161 4.810000e-58 235.0
23 TraesCS2A01G286100 chr6D 83.178 107 18 0 2561 2667 412012498 412012392 6.590000e-17 99.0
24 TraesCS2A01G286100 chr1B 86.697 218 20 7 2671 2880 432803258 432803474 1.730000e-57 233.0
25 TraesCS2A01G286100 chr1B 92.593 54 4 0 2660 2713 606588945 606588998 8.580000e-11 78.7
26 TraesCS2A01G286100 chr7B 84.490 245 22 6 2661 2889 198537797 198538041 8.050000e-56 228.0
27 TraesCS2A01G286100 chr4D 85.408 233 19 4 2660 2880 421890781 421890552 8.050000e-56 228.0
28 TraesCS2A01G286100 chr4D 89.552 134 11 3 1558 1689 466748227 466748359 1.780000e-37 167.0
29 TraesCS2A01G286100 chr7A 83.262 233 34 3 2661 2889 31011482 31011713 2.920000e-50 209.0
30 TraesCS2A01G286100 chr7A 93.966 116 7 0 1565 1680 622370152 622370037 2.960000e-40 176.0
31 TraesCS2A01G286100 chr7A 83.486 109 18 0 2559 2667 31011325 31011433 5.090000e-18 102.0
32 TraesCS2A01G286100 chr1A 91.667 132 9 2 1548 1677 339003620 339003489 6.360000e-42 182.0
33 TraesCS2A01G286100 chr1A 94.828 116 6 0 1565 1680 502769457 502769342 6.360000e-42 182.0
34 TraesCS2A01G286100 chr1A 92.562 121 8 1 1565 1685 392699734 392699615 3.830000e-39 172.0
35 TraesCS2A01G286100 chr4A 93.694 111 7 0 1565 1675 576584849 576584959 1.780000e-37 167.0
36 TraesCS2A01G286100 chr7D 81.818 110 18 2 2559 2667 21095706 21095598 1.100000e-14 91.6
37 TraesCS2A01G286100 chr5B 81.651 109 16 3 2559 2667 473085017 473085121 1.430000e-13 87.9
38 TraesCS2A01G286100 chr3B 80.909 110 20 1 2559 2667 27168932 27169041 5.130000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G286100 chr2A 485778299 485781187 2888 False 5336.000000 5336 100.000000 1 2889 1 chr2A.!!$F2 2888
1 TraesCS2A01G286100 chr2B 429179687 429181742 2055 True 785.333333 1799 90.363667 102 2099 3 chr2B.!!$R2 1997
2 TraesCS2A01G286100 chr2D 360478120 360481804 3684 False 418.333333 905 86.533333 94 2433 6 chr2D.!!$F3 2339

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.108804 ACATCCAAGCGTACTGGTCG 60.109 55.0 0.01 0.0 0.0 4.79 F
578 1470 0.464452 GTAACCTAGCACGATGGCCT 59.536 55.0 3.32 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 2905 1.000607 GACACACGTCTCAGCAGGTAA 60.001 52.381 0.0 0.0 39.22 2.85 R
2540 4285 0.030773 GCTCATCACGTCTGCGGATA 59.969 55.000 0.0 0.0 43.45 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.134127 GCCAAGGGCGTCACCATC 61.134 66.667 0.00 0.00 39.62 3.51
25 26 2.350895 CCAAGGGCGTCACCATCA 59.649 61.111 0.00 0.00 42.05 3.07
26 27 2.040544 CCAAGGGCGTCACCATCAC 61.041 63.158 0.00 0.00 42.05 3.06
27 28 2.040544 CAAGGGCGTCACCATCACC 61.041 63.158 0.00 0.00 42.05 4.02
28 29 3.605749 AAGGGCGTCACCATCACCG 62.606 63.158 0.00 0.00 42.05 4.94
36 37 4.856801 ACCATCACCGCGGCCATC 62.857 66.667 28.58 0.00 0.00 3.51
48 49 2.268920 GCCATCGGCTGAAGACCA 59.731 61.111 0.00 0.00 46.69 4.02
49 50 1.817099 GCCATCGGCTGAAGACCAG 60.817 63.158 0.00 0.00 46.69 4.00
50 51 1.900351 CCATCGGCTGAAGACCAGA 59.100 57.895 0.00 0.00 45.78 3.86
51 52 0.467384 CCATCGGCTGAAGACCAGAT 59.533 55.000 0.00 0.00 45.78 2.90
52 53 1.579698 CATCGGCTGAAGACCAGATG 58.420 55.000 0.00 0.00 45.78 2.90
53 54 1.134580 CATCGGCTGAAGACCAGATGT 60.135 52.381 0.00 0.00 45.78 3.06
54 55 0.976641 TCGGCTGAAGACCAGATGTT 59.023 50.000 0.00 0.00 45.78 2.71
55 56 1.066858 TCGGCTGAAGACCAGATGTTC 60.067 52.381 0.00 0.00 45.78 3.18
56 57 1.338105 CGGCTGAAGACCAGATGTTCA 60.338 52.381 0.00 0.00 45.78 3.18
57 58 2.679059 CGGCTGAAGACCAGATGTTCAT 60.679 50.000 0.00 0.00 45.78 2.57
58 59 2.941720 GGCTGAAGACCAGATGTTCATC 59.058 50.000 4.80 4.80 45.78 2.92
59 60 2.941720 GCTGAAGACCAGATGTTCATCC 59.058 50.000 8.89 0.00 45.78 3.51
60 61 3.620719 GCTGAAGACCAGATGTTCATCCA 60.621 47.826 8.89 0.00 45.78 3.41
61 62 4.190001 CTGAAGACCAGATGTTCATCCAG 58.810 47.826 8.89 4.20 45.78 3.86
62 63 3.840078 TGAAGACCAGATGTTCATCCAGA 59.160 43.478 8.89 0.00 35.73 3.86
63 64 4.472470 TGAAGACCAGATGTTCATCCAGAT 59.528 41.667 8.89 0.00 35.73 2.90
64 65 4.686191 AGACCAGATGTTCATCCAGATC 57.314 45.455 8.89 0.36 0.00 2.75
65 66 3.390639 AGACCAGATGTTCATCCAGATCC 59.609 47.826 8.89 0.00 0.00 3.36
66 67 2.103771 ACCAGATGTTCATCCAGATCCG 59.896 50.000 8.89 0.00 0.00 4.18
67 68 2.103771 CCAGATGTTCATCCAGATCCGT 59.896 50.000 8.89 0.00 0.00 4.69
68 69 3.388308 CAGATGTTCATCCAGATCCGTC 58.612 50.000 8.89 0.00 0.00 4.79
69 70 2.366916 AGATGTTCATCCAGATCCGTCC 59.633 50.000 8.89 0.00 0.00 4.79
70 71 0.830648 TGTTCATCCAGATCCGTCCC 59.169 55.000 0.00 0.00 0.00 4.46
71 72 0.830648 GTTCATCCAGATCCGTCCCA 59.169 55.000 0.00 0.00 0.00 4.37
72 73 1.209504 GTTCATCCAGATCCGTCCCAA 59.790 52.381 0.00 0.00 0.00 4.12
73 74 1.123077 TCATCCAGATCCGTCCCAAG 58.877 55.000 0.00 0.00 0.00 3.61
74 75 1.123077 CATCCAGATCCGTCCCAAGA 58.877 55.000 0.00 0.00 0.00 3.02
75 76 1.486310 CATCCAGATCCGTCCCAAGAA 59.514 52.381 0.00 0.00 0.00 2.52
76 77 0.902531 TCCAGATCCGTCCCAAGAAC 59.097 55.000 0.00 0.00 0.00 3.01
77 78 0.613260 CCAGATCCGTCCCAAGAACA 59.387 55.000 0.00 0.00 0.00 3.18
78 79 1.210478 CCAGATCCGTCCCAAGAACAT 59.790 52.381 0.00 0.00 0.00 2.71
79 80 2.555199 CAGATCCGTCCCAAGAACATC 58.445 52.381 0.00 0.00 0.00 3.06
80 81 1.486726 AGATCCGTCCCAAGAACATCC 59.513 52.381 0.00 0.00 0.00 3.51
81 82 1.209504 GATCCGTCCCAAGAACATCCA 59.790 52.381 0.00 0.00 0.00 3.41
82 83 1.060729 TCCGTCCCAAGAACATCCAA 58.939 50.000 0.00 0.00 0.00 3.53
83 84 1.003118 TCCGTCCCAAGAACATCCAAG 59.997 52.381 0.00 0.00 0.00 3.61
84 85 0.804989 CGTCCCAAGAACATCCAAGC 59.195 55.000 0.00 0.00 0.00 4.01
85 86 0.804989 GTCCCAAGAACATCCAAGCG 59.195 55.000 0.00 0.00 0.00 4.68
86 87 0.400213 TCCCAAGAACATCCAAGCGT 59.600 50.000 0.00 0.00 0.00 5.07
87 88 1.626321 TCCCAAGAACATCCAAGCGTA 59.374 47.619 0.00 0.00 0.00 4.42
88 89 1.737793 CCCAAGAACATCCAAGCGTAC 59.262 52.381 0.00 0.00 0.00 3.67
89 90 2.615493 CCCAAGAACATCCAAGCGTACT 60.615 50.000 0.00 0.00 0.00 2.73
90 91 2.416547 CCAAGAACATCCAAGCGTACTG 59.583 50.000 0.00 0.00 0.00 2.74
91 92 2.386661 AGAACATCCAAGCGTACTGG 57.613 50.000 0.00 0.00 0.00 4.00
92 93 1.623811 AGAACATCCAAGCGTACTGGT 59.376 47.619 0.01 0.00 0.00 4.00
93 94 2.000447 GAACATCCAAGCGTACTGGTC 59.000 52.381 0.01 0.00 0.00 4.02
94 95 0.108804 ACATCCAAGCGTACTGGTCG 60.109 55.000 0.01 0.00 0.00 4.79
95 96 0.806102 CATCCAAGCGTACTGGTCGG 60.806 60.000 0.01 0.00 0.00 4.79
96 97 1.956629 ATCCAAGCGTACTGGTCGGG 61.957 60.000 0.01 1.84 0.00 5.14
97 98 2.642254 CCAAGCGTACTGGTCGGGA 61.642 63.158 0.00 0.00 0.00 5.14
98 99 1.445582 CAAGCGTACTGGTCGGGAC 60.446 63.158 0.00 0.00 0.00 4.46
119 120 2.970639 CGAAGGCAAGAGTCCGGA 59.029 61.111 0.00 0.00 0.00 5.14
158 167 0.527600 CACGCGCATTAGTCTGGCTA 60.528 55.000 5.73 0.00 0.00 3.93
165 174 2.279741 CATTAGTCTGGCTAGCGCAAA 58.720 47.619 11.47 0.00 38.10 3.68
308 318 4.404098 GTCCGCGGTCCACCCATT 62.404 66.667 27.15 0.00 0.00 3.16
311 321 0.759812 TCCGCGGTCCACCCATTATA 60.760 55.000 27.15 0.00 0.00 0.98
338 361 4.710167 GGTAGGCCGGGCGTTGTT 62.710 66.667 23.81 7.21 0.00 2.83
345 368 3.118454 CGGGCGTTGTTCGAGCAT 61.118 61.111 1.75 0.00 42.86 3.79
357 380 1.008424 CGAGCATATCAGACCGCGT 60.008 57.895 4.92 0.00 0.00 6.01
372 395 3.003173 CGTGGAGAGCCCCAGGAA 61.003 66.667 4.63 0.00 42.89 3.36
409 1301 3.943034 CACAAAACGGACGGCGCA 61.943 61.111 10.83 0.00 0.00 6.09
429 1321 2.046892 GAGCTTCCTTGCCGAGCA 60.047 61.111 0.00 0.00 38.85 4.26
458 1350 2.047844 CTGGTCGGCTGGTGTGAG 60.048 66.667 0.00 0.00 0.00 3.51
459 1351 2.842462 TGGTCGGCTGGTGTGAGT 60.842 61.111 0.00 0.00 0.00 3.41
460 1352 2.357517 GGTCGGCTGGTGTGAGTG 60.358 66.667 0.00 0.00 0.00 3.51
461 1353 2.421739 GTCGGCTGGTGTGAGTGT 59.578 61.111 0.00 0.00 0.00 3.55
462 1354 1.956170 GTCGGCTGGTGTGAGTGTG 60.956 63.158 0.00 0.00 0.00 3.82
463 1355 2.131067 TCGGCTGGTGTGAGTGTGA 61.131 57.895 0.00 0.00 0.00 3.58
464 1356 1.956170 CGGCTGGTGTGAGTGTGAC 60.956 63.158 0.00 0.00 0.00 3.67
465 1357 1.146041 GGCTGGTGTGAGTGTGACA 59.854 57.895 0.00 0.00 0.00 3.58
523 1415 0.598562 GCTGAAGACTCCGACAGACA 59.401 55.000 0.00 0.00 32.90 3.41
530 1422 3.343788 CTCCGACAGACAGGTCCGC 62.344 68.421 0.00 0.00 34.24 5.54
570 1462 1.202031 GCAACATGCGTAACCTAGCAC 60.202 52.381 0.00 0.00 46.83 4.40
572 1464 0.528924 ACATGCGTAACCTAGCACGA 59.471 50.000 12.26 1.19 46.83 4.35
578 1470 0.464452 GTAACCTAGCACGATGGCCT 59.536 55.000 3.32 0.00 0.00 5.19
579 1471 1.684983 GTAACCTAGCACGATGGCCTA 59.315 52.381 3.32 0.00 0.00 3.93
582 1474 1.005630 CTAGCACGATGGCCTAGGC 60.006 63.158 26.55 26.55 41.06 3.93
583 1475 1.457643 TAGCACGATGGCCTAGGCT 60.458 57.895 32.18 14.96 41.60 4.58
600 1492 2.994995 TGCGTCCACGGTCCATCT 60.995 61.111 0.55 0.00 40.23 2.90
614 1506 3.244700 GGTCCATCTATCATGAACCCCTG 60.245 52.174 0.00 0.00 0.00 4.45
617 1509 3.008813 CCATCTATCATGAACCCCTGAGG 59.991 52.174 0.00 0.00 43.78 3.86
628 1520 4.135153 CCTGAGGCGACCCGTCTG 62.135 72.222 0.00 0.00 43.67 3.51
636 1528 4.570663 GACCCGTCTGGATCCGCG 62.571 72.222 7.39 11.37 37.49 6.46
654 1546 3.606662 CCGTCCGGGCAGATCGAT 61.607 66.667 6.96 0.00 0.00 3.59
707 1599 2.970324 CCACCACACAACGGACGG 60.970 66.667 0.00 0.00 0.00 4.79
712 1792 4.517815 ACACAACGGACGGCGTGT 62.518 61.111 21.19 7.37 37.76 4.49
746 1826 1.566231 CCTTGGAGGCTCCCACTAATT 59.434 52.381 30.03 0.00 35.03 1.40
884 1967 1.673009 TCATCGCCCGGAACAAACC 60.673 57.895 0.73 0.00 0.00 3.27
972 2055 1.341606 GCTGAGAAACGGAGAGAACG 58.658 55.000 0.00 0.00 37.36 3.95
976 2059 0.959553 AGAAACGGAGAGAACGCAGA 59.040 50.000 0.00 0.00 34.00 4.26
1041 2124 4.872691 GCAAGAAAGATTCATCCTTCTCGA 59.127 41.667 1.86 0.00 36.77 4.04
1055 2138 5.289595 TCCTTCTCGAATCATTACCAATCG 58.710 41.667 0.00 0.00 34.98 3.34
1080 2163 3.004944 GGTTCTTTGGTAATTGCGTTCCA 59.995 43.478 0.00 0.00 0.00 3.53
1204 2287 7.004555 TCTGAATGCTTAGTTGGAGTCTAAA 57.995 36.000 0.00 0.00 0.00 1.85
1239 2322 3.724374 TCTCTGAAGTTGGTACGGTTTG 58.276 45.455 0.00 0.00 0.00 2.93
1336 2420 2.819608 CACAACTTGTTCCCATACCCTG 59.180 50.000 0.00 0.00 0.00 4.45
1518 2602 4.889409 GGATGGTATGATGCTTTTTCTGGA 59.111 41.667 0.00 0.00 0.00 3.86
1564 2648 2.387757 AGTTGGGACATGCAGTTTGTT 58.612 42.857 0.00 0.00 39.30 2.83
1565 2649 3.561143 AGTTGGGACATGCAGTTTGTTA 58.439 40.909 0.00 0.00 39.30 2.41
1566 2650 3.317993 AGTTGGGACATGCAGTTTGTTAC 59.682 43.478 0.00 0.00 39.30 2.50
1567 2651 3.222173 TGGGACATGCAGTTTGTTACT 57.778 42.857 0.00 0.00 37.68 2.24
1568 2652 3.146066 TGGGACATGCAGTTTGTTACTC 58.854 45.455 0.00 0.00 33.85 2.59
1569 2653 2.488153 GGGACATGCAGTTTGTTACTCC 59.512 50.000 0.00 0.00 33.85 3.85
1570 2654 2.488153 GGACATGCAGTTTGTTACTCCC 59.512 50.000 0.00 0.00 33.85 4.30
1571 2655 3.412386 GACATGCAGTTTGTTACTCCCT 58.588 45.455 0.00 0.00 33.85 4.20
1572 2656 3.412386 ACATGCAGTTTGTTACTCCCTC 58.588 45.455 0.00 0.00 33.85 4.30
1573 2657 2.561478 TGCAGTTTGTTACTCCCTCC 57.439 50.000 0.00 0.00 33.85 4.30
1574 2658 1.270625 TGCAGTTTGTTACTCCCTCCG 60.271 52.381 0.00 0.00 33.85 4.63
1575 2659 1.270678 GCAGTTTGTTACTCCCTCCGT 60.271 52.381 0.00 0.00 33.85 4.69
1576 2660 2.809299 GCAGTTTGTTACTCCCTCCGTT 60.809 50.000 0.00 0.00 33.85 4.44
1577 2661 3.064931 CAGTTTGTTACTCCCTCCGTTC 58.935 50.000 0.00 0.00 33.85 3.95
1578 2662 2.970640 AGTTTGTTACTCCCTCCGTTCT 59.029 45.455 0.00 0.00 28.23 3.01
1579 2663 4.021719 CAGTTTGTTACTCCCTCCGTTCTA 60.022 45.833 0.00 0.00 33.85 2.10
1580 2664 4.590222 AGTTTGTTACTCCCTCCGTTCTAA 59.410 41.667 0.00 0.00 28.23 2.10
1581 2665 5.070847 AGTTTGTTACTCCCTCCGTTCTAAA 59.929 40.000 0.00 0.00 28.23 1.85
1582 2666 5.750352 TTGTTACTCCCTCCGTTCTAAAT 57.250 39.130 0.00 0.00 0.00 1.40
1583 2667 5.750352 TGTTACTCCCTCCGTTCTAAATT 57.250 39.130 0.00 0.00 0.00 1.82
1584 2668 6.855763 TGTTACTCCCTCCGTTCTAAATTA 57.144 37.500 0.00 0.00 0.00 1.40
1585 2669 6.633856 TGTTACTCCCTCCGTTCTAAATTAC 58.366 40.000 0.00 0.00 0.00 1.89
1586 2670 6.438425 TGTTACTCCCTCCGTTCTAAATTACT 59.562 38.462 0.00 0.00 0.00 2.24
1587 2671 5.595257 ACTCCCTCCGTTCTAAATTACTC 57.405 43.478 0.00 0.00 0.00 2.59
1588 2672 4.097589 ACTCCCTCCGTTCTAAATTACTCG 59.902 45.833 0.00 0.00 0.00 4.18
1589 2673 4.019174 TCCCTCCGTTCTAAATTACTCGT 58.981 43.478 0.00 0.00 0.00 4.18
1590 2674 4.096984 TCCCTCCGTTCTAAATTACTCGTC 59.903 45.833 0.00 0.00 0.00 4.20
1591 2675 4.033684 CCTCCGTTCTAAATTACTCGTCG 58.966 47.826 0.00 0.00 0.00 5.12
1592 2676 3.429085 TCCGTTCTAAATTACTCGTCGC 58.571 45.455 0.00 0.00 0.00 5.19
1593 2677 3.119884 TCCGTTCTAAATTACTCGTCGCA 60.120 43.478 0.00 0.00 0.00 5.10
1594 2678 3.239941 CCGTTCTAAATTACTCGTCGCAG 59.760 47.826 0.00 0.00 0.00 5.18
1595 2679 4.093514 CGTTCTAAATTACTCGTCGCAGA 58.906 43.478 0.00 0.00 0.00 4.26
1596 2680 4.556135 CGTTCTAAATTACTCGTCGCAGAA 59.444 41.667 0.00 0.00 39.69 3.02
1597 2681 5.060077 CGTTCTAAATTACTCGTCGCAGAAA 59.940 40.000 0.00 0.00 39.69 2.52
1598 2682 6.237490 CGTTCTAAATTACTCGTCGCAGAAAT 60.237 38.462 0.00 0.00 39.69 2.17
1599 2683 6.569228 TCTAAATTACTCGTCGCAGAAATG 57.431 37.500 0.00 0.00 39.69 2.32
1600 2684 4.600012 AAATTACTCGTCGCAGAAATGG 57.400 40.909 0.00 0.00 39.69 3.16
1601 2685 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
1602 2686 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
1603 2687 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
1604 2688 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
1605 2689 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
1606 2690 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
1607 2691 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
1608 2692 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
1609 2693 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
1610 2694 4.982295 CGTCGCAGAAATGGATGTATCTAA 59.018 41.667 0.00 0.00 39.69 2.10
1611 2695 5.462068 CGTCGCAGAAATGGATGTATCTAAA 59.538 40.000 0.00 0.00 39.69 1.85
1612 2696 6.019075 CGTCGCAGAAATGGATGTATCTAAAA 60.019 38.462 0.00 0.00 39.69 1.52
1613 2697 7.126398 GTCGCAGAAATGGATGTATCTAAAAC 58.874 38.462 0.00 0.00 39.69 2.43
1614 2698 7.011482 GTCGCAGAAATGGATGTATCTAAAACT 59.989 37.037 0.00 0.00 39.69 2.66
1615 2699 8.201464 TCGCAGAAATGGATGTATCTAAAACTA 58.799 33.333 0.00 0.00 0.00 2.24
1616 2700 8.826710 CGCAGAAATGGATGTATCTAAAACTAA 58.173 33.333 0.00 0.00 0.00 2.24
1662 2746 7.596749 ACTTATGACAAGTAATTCAGAACGG 57.403 36.000 0.00 0.00 0.00 4.44
1663 2747 7.383687 ACTTATGACAAGTAATTCAGAACGGA 58.616 34.615 0.00 0.00 0.00 4.69
1664 2748 7.545965 ACTTATGACAAGTAATTCAGAACGGAG 59.454 37.037 0.00 0.00 0.00 4.63
1665 2749 4.566004 TGACAAGTAATTCAGAACGGAGG 58.434 43.478 0.00 0.00 0.00 4.30
1666 2750 3.933332 GACAAGTAATTCAGAACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
1667 2751 3.581332 ACAAGTAATTCAGAACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
1668 2752 4.184629 CAAGTAATTCAGAACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
1669 2753 3.442076 AGTAATTCAGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
1670 2754 4.607239 AGTAATTCAGAACGGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
1671 2755 4.645588 AGTAATTCAGAACGGAGGGAGTAG 59.354 45.833 0.00 0.00 0.00 2.57
1748 2846 1.755179 GTGATGGCTACATGCTTGGT 58.245 50.000 4.44 0.00 42.39 3.67
1757 2855 1.181098 ACATGCTTGGTTGGGCTGTC 61.181 55.000 4.44 0.00 0.00 3.51
1807 2905 4.751098 GCTACTACTGACTGCTACTACGAT 59.249 45.833 0.00 0.00 0.00 3.73
1849 2952 1.575447 GCCTTCTCCCCTTGGGTGAT 61.575 60.000 4.84 0.00 43.67 3.06
1885 2988 2.292103 TGAACAACTTTGCTTGTGCC 57.708 45.000 0.00 0.00 34.50 5.01
1894 2997 1.825090 TTGCTTGTGCCTGACTATGG 58.175 50.000 0.00 0.00 38.71 2.74
1911 3016 5.136828 ACTATGGTCTCATCTGTACTCCTG 58.863 45.833 0.00 0.00 34.96 3.86
1928 3033 5.571285 ACTCCTGTGTAACTCTAGACATGA 58.429 41.667 0.00 0.00 38.04 3.07
1941 3046 9.814899 AACTCTAGACATGAGTGAAATAATGAG 57.185 33.333 0.00 0.00 43.16 2.90
1974 3079 3.181490 GGTTCTTTCTTTGCAAGTTCCGT 60.181 43.478 0.00 0.00 0.00 4.69
1981 3086 2.543777 TTGCAAGTTCCGTAGAGCTT 57.456 45.000 0.00 0.00 43.58 3.74
2056 3356 3.044114 GCGCGAGTCTGAAACGACG 62.044 63.158 12.10 0.00 38.90 5.12
2099 3403 4.036262 GTCTGTCTGTCCTATAGAGCAGTG 59.964 50.000 17.25 11.71 31.37 3.66
2180 3496 4.314440 GTGCGACCCTGGTGCAGA 62.314 66.667 11.88 0.00 39.67 4.26
2181 3497 3.321648 TGCGACCCTGGTGCAGAT 61.322 61.111 8.67 0.00 32.44 2.90
2182 3498 2.045926 GCGACCCTGGTGCAGATT 60.046 61.111 0.00 0.00 32.44 2.40
2183 3499 1.220749 GCGACCCTGGTGCAGATTA 59.779 57.895 0.00 0.00 32.44 1.75
2184 3500 1.090052 GCGACCCTGGTGCAGATTAC 61.090 60.000 0.00 0.00 32.44 1.89
2185 3501 0.806102 CGACCCTGGTGCAGATTACG 60.806 60.000 0.00 0.00 32.44 3.18
2186 3502 0.535335 GACCCTGGTGCAGATTACGA 59.465 55.000 0.00 0.00 32.44 3.43
2187 3503 0.249398 ACCCTGGTGCAGATTACGAC 59.751 55.000 0.00 0.00 32.44 4.34
2188 3504 0.806102 CCCTGGTGCAGATTACGACG 60.806 60.000 0.00 0.00 32.44 5.12
2189 3505 0.172578 CCTGGTGCAGATTACGACGA 59.827 55.000 0.00 0.00 32.44 4.20
2190 3506 1.269166 CTGGTGCAGATTACGACGAC 58.731 55.000 0.00 0.00 32.44 4.34
2191 3507 0.885879 TGGTGCAGATTACGACGACT 59.114 50.000 0.00 0.00 0.00 4.18
2192 3508 1.135489 TGGTGCAGATTACGACGACTC 60.135 52.381 0.00 0.00 0.00 3.36
2193 3509 1.181001 GTGCAGATTACGACGACTCG 58.819 55.000 0.00 0.00 46.06 4.18
2194 3510 0.098200 TGCAGATTACGACGACTCGG 59.902 55.000 0.00 0.00 44.80 4.63
2359 4104 1.831389 CGTGTGCGTTTCCTGTCCAG 61.831 60.000 0.00 0.00 0.00 3.86
2365 4110 1.247567 CGTTTCCTGTCCAGCCAAAT 58.752 50.000 0.00 0.00 0.00 2.32
2373 4118 0.331616 GTCCAGCCAAATACCCCTGT 59.668 55.000 0.00 0.00 0.00 4.00
2383 4128 0.672342 ATACCCCTGTATCGCACGTC 59.328 55.000 0.00 0.00 31.99 4.34
2385 4130 1.065928 CCCCTGTATCGCACGTCTC 59.934 63.158 0.00 0.00 0.00 3.36
2389 4134 0.867753 CTGTATCGCACGTCTCTGCC 60.868 60.000 0.00 0.00 33.18 4.85
2405 4150 4.854924 CCGCCGCATCCACATCCA 62.855 66.667 0.00 0.00 0.00 3.41
2410 4155 2.114670 CGCATCCACATCCACACCC 61.115 63.158 0.00 0.00 0.00 4.61
2411 4156 2.114670 GCATCCACATCCACACCCG 61.115 63.158 0.00 0.00 0.00 5.28
2426 4171 1.086634 ACCCGTACTCGTCGCTAGTC 61.087 60.000 0.00 0.00 35.01 2.59
2433 4178 0.863144 CTCGTCGCTAGTCTAGAGCC 59.137 60.000 11.27 0.00 36.53 4.70
2434 4179 0.464870 TCGTCGCTAGTCTAGAGCCT 59.535 55.000 11.27 0.00 36.53 4.58
2435 4180 0.863144 CGTCGCTAGTCTAGAGCCTC 59.137 60.000 11.27 1.64 36.53 4.70
2436 4181 1.539496 CGTCGCTAGTCTAGAGCCTCT 60.539 57.143 11.27 0.00 36.53 3.69
2437 4182 1.871039 GTCGCTAGTCTAGAGCCTCTG 59.129 57.143 11.27 0.00 36.53 3.35
2438 4183 0.591170 CGCTAGTCTAGAGCCTCTGC 59.409 60.000 11.27 0.00 36.53 4.26
2448 4193 2.045536 GCCTCTGCTGGAGTTGGG 60.046 66.667 11.19 7.01 40.30 4.12
2449 4194 2.596851 GCCTCTGCTGGAGTTGGGA 61.597 63.158 11.19 0.00 40.30 4.37
2450 4195 1.601171 CCTCTGCTGGAGTTGGGAG 59.399 63.158 0.00 0.00 40.30 4.30
2451 4196 1.078567 CTCTGCTGGAGTTGGGAGC 60.079 63.158 0.00 0.00 37.30 4.70
2452 4197 2.045536 CTGCTGGAGTTGGGAGCC 60.046 66.667 0.00 0.00 31.31 4.70
2453 4198 2.530151 TGCTGGAGTTGGGAGCCT 60.530 61.111 0.00 0.00 31.31 4.58
2454 4199 1.229496 TGCTGGAGTTGGGAGCCTA 60.229 57.895 0.00 0.00 31.31 3.93
2455 4200 1.222113 GCTGGAGTTGGGAGCCTAC 59.778 63.158 0.00 0.00 0.00 3.18
2456 4201 1.553690 GCTGGAGTTGGGAGCCTACA 61.554 60.000 0.00 0.00 31.96 2.74
2457 4202 0.250513 CTGGAGTTGGGAGCCTACAC 59.749 60.000 0.00 0.00 31.96 2.90
2458 4203 0.472925 TGGAGTTGGGAGCCTACACA 60.473 55.000 0.00 0.00 31.96 3.72
2459 4204 0.036294 GGAGTTGGGAGCCTACACAC 60.036 60.000 0.00 0.00 31.96 3.82
2460 4205 0.389948 GAGTTGGGAGCCTACACACG 60.390 60.000 0.00 0.00 31.96 4.49
2461 4206 1.375523 GTTGGGAGCCTACACACGG 60.376 63.158 0.00 0.00 0.00 4.94
2467 4212 2.342279 GCCTACACACGGCAGTCA 59.658 61.111 0.00 0.00 46.77 3.41
2468 4213 1.738099 GCCTACACACGGCAGTCAG 60.738 63.158 0.00 0.00 46.77 3.51
2469 4214 1.079819 CCTACACACGGCAGTCAGG 60.080 63.158 0.00 0.00 0.00 3.86
2470 4215 1.666011 CTACACACGGCAGTCAGGT 59.334 57.895 0.00 0.00 0.00 4.00
2471 4216 0.388649 CTACACACGGCAGTCAGGTC 60.389 60.000 0.00 0.00 0.00 3.85
2472 4217 1.110518 TACACACGGCAGTCAGGTCA 61.111 55.000 0.00 0.00 0.00 4.02
2473 4218 1.956170 CACACGGCAGTCAGGTCAC 60.956 63.158 0.00 0.00 0.00 3.67
2474 4219 2.734723 CACGGCAGTCAGGTCACG 60.735 66.667 0.00 0.00 0.00 4.35
2475 4220 3.224324 ACGGCAGTCAGGTCACGT 61.224 61.111 0.00 0.00 0.00 4.49
2476 4221 2.430921 CGGCAGTCAGGTCACGTC 60.431 66.667 0.00 0.00 0.00 4.34
2477 4222 2.430921 GGCAGTCAGGTCACGTCG 60.431 66.667 0.00 0.00 0.00 5.12
2478 4223 3.106407 GCAGTCAGGTCACGTCGC 61.106 66.667 0.00 0.00 0.00 5.19
2479 4224 2.801162 CAGTCAGGTCACGTCGCG 60.801 66.667 0.00 0.00 0.00 5.87
2480 4225 2.976350 AGTCAGGTCACGTCGCGA 60.976 61.111 3.71 3.71 0.00 5.87
2481 4226 2.178521 GTCAGGTCACGTCGCGAT 59.821 61.111 14.06 0.00 0.00 4.58
2482 4227 1.868251 GTCAGGTCACGTCGCGATC 60.868 63.158 14.06 5.25 0.00 3.69
2483 4228 2.579787 CAGGTCACGTCGCGATCC 60.580 66.667 14.06 10.38 0.00 3.36
2484 4229 2.750637 AGGTCACGTCGCGATCCT 60.751 61.111 14.06 12.52 0.00 3.24
2485 4230 2.278013 GGTCACGTCGCGATCCTC 60.278 66.667 14.06 0.00 0.00 3.71
2486 4231 2.762234 GGTCACGTCGCGATCCTCT 61.762 63.158 14.06 0.00 0.00 3.69
2487 4232 1.297745 GTCACGTCGCGATCCTCTC 60.298 63.158 14.06 0.00 0.00 3.20
2488 4233 1.743995 TCACGTCGCGATCCTCTCA 60.744 57.895 14.06 0.00 0.00 3.27
2489 4234 1.297967 CACGTCGCGATCCTCTCAG 60.298 63.158 14.06 0.00 0.00 3.35
2490 4235 2.352915 CGTCGCGATCCTCTCAGC 60.353 66.667 14.06 0.00 0.00 4.26
2491 4236 2.829206 CGTCGCGATCCTCTCAGCT 61.829 63.158 14.06 0.00 0.00 4.24
2492 4237 1.008995 GTCGCGATCCTCTCAGCTC 60.009 63.158 14.06 0.00 0.00 4.09
2493 4238 2.051435 CGCGATCCTCTCAGCTCG 60.051 66.667 0.00 0.00 0.00 5.03
2494 4239 2.334653 GCGATCCTCTCAGCTCGG 59.665 66.667 0.00 0.00 0.00 4.63
2495 4240 2.190170 GCGATCCTCTCAGCTCGGA 61.190 63.158 0.00 0.00 0.00 4.55
2496 4241 1.948508 CGATCCTCTCAGCTCGGAG 59.051 63.158 0.00 0.00 36.21 4.63
2497 4242 0.817634 CGATCCTCTCAGCTCGGAGT 60.818 60.000 6.90 0.00 36.30 3.85
2498 4243 1.541452 CGATCCTCTCAGCTCGGAGTA 60.541 57.143 6.90 0.00 36.30 2.59
2499 4244 2.577700 GATCCTCTCAGCTCGGAGTAA 58.422 52.381 6.90 1.30 36.30 2.24
2500 4245 2.045561 TCCTCTCAGCTCGGAGTAAG 57.954 55.000 6.90 2.40 36.30 2.34
2501 4246 1.560146 TCCTCTCAGCTCGGAGTAAGA 59.440 52.381 6.90 6.44 36.30 2.10
2502 4247 1.946768 CCTCTCAGCTCGGAGTAAGAG 59.053 57.143 18.47 18.47 38.68 2.85
2521 4266 3.637432 GAGCATCTACTGTCGGATCTTG 58.363 50.000 0.00 0.00 0.00 3.02
2522 4267 3.027412 AGCATCTACTGTCGGATCTTGT 58.973 45.455 0.00 0.00 0.00 3.16
2523 4268 4.207955 AGCATCTACTGTCGGATCTTGTA 58.792 43.478 0.00 0.00 0.00 2.41
2524 4269 4.645136 AGCATCTACTGTCGGATCTTGTAA 59.355 41.667 0.00 0.00 0.00 2.41
2525 4270 5.127194 AGCATCTACTGTCGGATCTTGTAAA 59.873 40.000 0.00 0.00 0.00 2.01
2526 4271 5.986135 GCATCTACTGTCGGATCTTGTAAAT 59.014 40.000 0.00 0.00 0.00 1.40
2527 4272 6.144724 GCATCTACTGTCGGATCTTGTAAATC 59.855 42.308 0.00 0.00 0.00 2.17
2528 4273 6.145338 TCTACTGTCGGATCTTGTAAATCC 57.855 41.667 0.00 0.00 39.51 3.01
2533 4278 2.640316 GGATCTTGTAAATCCGGCCT 57.360 50.000 0.00 0.00 33.78 5.19
2534 4279 2.932261 GGATCTTGTAAATCCGGCCTT 58.068 47.619 0.00 0.00 33.78 4.35
2535 4280 3.288092 GGATCTTGTAAATCCGGCCTTT 58.712 45.455 0.00 1.35 33.78 3.11
2536 4281 3.699538 GGATCTTGTAAATCCGGCCTTTT 59.300 43.478 0.00 0.52 33.78 2.27
2537 4282 4.885325 GGATCTTGTAAATCCGGCCTTTTA 59.115 41.667 0.00 0.00 33.78 1.52
2538 4283 5.358725 GGATCTTGTAAATCCGGCCTTTTAA 59.641 40.000 0.00 0.00 33.78 1.52
2539 4284 6.127563 GGATCTTGTAAATCCGGCCTTTTAAA 60.128 38.462 0.00 0.00 33.78 1.52
2540 4285 6.844097 TCTTGTAAATCCGGCCTTTTAAAT 57.156 33.333 0.00 0.00 0.00 1.40
2541 4286 7.941431 TCTTGTAAATCCGGCCTTTTAAATA 57.059 32.000 0.00 0.00 0.00 1.40
2542 4287 8.528044 TCTTGTAAATCCGGCCTTTTAAATAT 57.472 30.769 0.00 0.00 0.00 1.28
2543 4288 8.626526 TCTTGTAAATCCGGCCTTTTAAATATC 58.373 33.333 0.00 0.00 0.00 1.63
2544 4289 7.279750 TGTAAATCCGGCCTTTTAAATATCC 57.720 36.000 0.00 0.00 0.00 2.59
2545 4290 5.447624 AAATCCGGCCTTTTAAATATCCG 57.552 39.130 0.00 12.69 36.90 4.18
2546 4291 2.223745 TCCGGCCTTTTAAATATCCGC 58.776 47.619 0.00 2.04 35.93 5.54
2547 4292 1.950909 CCGGCCTTTTAAATATCCGCA 59.049 47.619 0.00 0.00 35.93 5.69
2548 4293 2.031157 CCGGCCTTTTAAATATCCGCAG 60.031 50.000 0.00 2.89 35.93 5.18
2549 4294 2.875933 CGGCCTTTTAAATATCCGCAGA 59.124 45.455 0.00 0.00 0.00 4.26
2550 4295 3.303791 CGGCCTTTTAAATATCCGCAGAC 60.304 47.826 0.00 0.00 0.00 3.51
2551 4296 3.303791 GGCCTTTTAAATATCCGCAGACG 60.304 47.826 0.00 0.00 39.67 4.18
2552 4297 3.311596 GCCTTTTAAATATCCGCAGACGT 59.688 43.478 0.00 0.00 37.70 4.34
2553 4298 4.785341 GCCTTTTAAATATCCGCAGACGTG 60.785 45.833 0.00 0.00 37.70 4.49
2554 4299 4.569162 CCTTTTAAATATCCGCAGACGTGA 59.431 41.667 0.00 0.00 37.70 4.35
2555 4300 5.236478 CCTTTTAAATATCCGCAGACGTGAT 59.764 40.000 0.00 0.00 37.70 3.06
2556 4301 5.651172 TTTAAATATCCGCAGACGTGATG 57.349 39.130 0.00 0.00 37.70 3.07
2557 4302 3.452755 AAATATCCGCAGACGTGATGA 57.547 42.857 0.00 0.00 37.70 2.92
2558 4303 2.713895 ATATCCGCAGACGTGATGAG 57.286 50.000 0.00 0.00 37.70 2.90
2559 4304 0.030773 TATCCGCAGACGTGATGAGC 59.969 55.000 0.00 0.00 37.70 4.26
2560 4305 1.948721 ATCCGCAGACGTGATGAGCA 61.949 55.000 0.00 0.00 37.70 4.26
2561 4306 2.447887 CCGCAGACGTGATGAGCAC 61.448 63.158 0.00 0.00 44.21 4.40
2562 4307 1.445066 CGCAGACGTGATGAGCACT 60.445 57.895 0.00 0.00 45.49 4.40
2563 4308 0.179163 CGCAGACGTGATGAGCACTA 60.179 55.000 0.00 0.00 45.49 2.74
2564 4309 1.732405 CGCAGACGTGATGAGCACTAA 60.732 52.381 0.00 0.00 45.49 2.24
2565 4310 1.656095 GCAGACGTGATGAGCACTAAC 59.344 52.381 0.00 0.00 45.49 2.34
2566 4311 2.263077 CAGACGTGATGAGCACTAACC 58.737 52.381 0.00 0.00 45.49 2.85
2567 4312 1.135373 AGACGTGATGAGCACTAACCG 60.135 52.381 0.00 0.00 45.49 4.44
2568 4313 0.108804 ACGTGATGAGCACTAACCGG 60.109 55.000 0.00 0.00 45.49 5.28
2569 4314 0.806102 CGTGATGAGCACTAACCGGG 60.806 60.000 6.32 0.00 45.49 5.73
2570 4315 1.090052 GTGATGAGCACTAACCGGGC 61.090 60.000 6.32 0.00 44.27 6.13
2571 4316 1.220749 GATGAGCACTAACCGGGCA 59.779 57.895 6.32 0.00 0.00 5.36
2572 4317 0.392461 GATGAGCACTAACCGGGCAA 60.392 55.000 6.32 0.00 0.00 4.52
2573 4318 0.676782 ATGAGCACTAACCGGGCAAC 60.677 55.000 6.32 0.00 0.00 4.17
2589 4334 3.179048 GGCAACCTTCAAATTATGTCGC 58.821 45.455 0.00 0.00 0.00 5.19
2590 4335 3.179048 GCAACCTTCAAATTATGTCGCC 58.821 45.455 0.00 0.00 0.00 5.54
2591 4336 3.366883 GCAACCTTCAAATTATGTCGCCA 60.367 43.478 0.00 0.00 0.00 5.69
2592 4337 4.804108 CAACCTTCAAATTATGTCGCCAA 58.196 39.130 0.00 0.00 0.00 4.52
2593 4338 5.410067 CAACCTTCAAATTATGTCGCCAAT 58.590 37.500 0.00 0.00 0.00 3.16
2594 4339 6.559810 CAACCTTCAAATTATGTCGCCAATA 58.440 36.000 0.00 0.00 0.00 1.90
2595 4340 6.959639 ACCTTCAAATTATGTCGCCAATAT 57.040 33.333 0.00 0.00 0.00 1.28
2596 4341 7.346751 ACCTTCAAATTATGTCGCCAATATT 57.653 32.000 0.00 0.00 0.00 1.28
2597 4342 7.425606 ACCTTCAAATTATGTCGCCAATATTC 58.574 34.615 0.00 0.00 0.00 1.75
2598 4343 6.578545 CCTTCAAATTATGTCGCCAATATTCG 59.421 38.462 0.00 0.00 0.00 3.34
2599 4344 6.612247 TCAAATTATGTCGCCAATATTCGT 57.388 33.333 0.00 0.00 0.00 3.85
2600 4345 6.426327 TCAAATTATGTCGCCAATATTCGTG 58.574 36.000 0.00 0.00 0.00 4.35
2601 4346 6.037720 TCAAATTATGTCGCCAATATTCGTGT 59.962 34.615 0.00 0.00 0.00 4.49
2602 4347 7.224949 TCAAATTATGTCGCCAATATTCGTGTA 59.775 33.333 0.00 0.00 0.00 2.90
2603 4348 7.667043 AATTATGTCGCCAATATTCGTGTAT 57.333 32.000 0.00 0.00 0.00 2.29
2604 4349 6.699895 TTATGTCGCCAATATTCGTGTATC 57.300 37.500 0.00 0.00 0.00 2.24
2605 4350 4.316205 TGTCGCCAATATTCGTGTATCT 57.684 40.909 0.00 0.00 0.00 1.98
2606 4351 4.295870 TGTCGCCAATATTCGTGTATCTC 58.704 43.478 0.00 0.00 0.00 2.75
2607 4352 4.202070 TGTCGCCAATATTCGTGTATCTCA 60.202 41.667 0.00 0.00 0.00 3.27
2608 4353 4.923871 GTCGCCAATATTCGTGTATCTCAT 59.076 41.667 0.00 0.00 0.00 2.90
2609 4354 6.090783 GTCGCCAATATTCGTGTATCTCATA 58.909 40.000 0.00 0.00 0.00 2.15
2610 4355 6.752351 GTCGCCAATATTCGTGTATCTCATAT 59.248 38.462 0.00 0.00 0.00 1.78
2611 4356 6.972901 TCGCCAATATTCGTGTATCTCATATC 59.027 38.462 0.00 0.00 0.00 1.63
2612 4357 6.199154 CGCCAATATTCGTGTATCTCATATCC 59.801 42.308 0.00 0.00 0.00 2.59
2613 4358 6.199154 GCCAATATTCGTGTATCTCATATCCG 59.801 42.308 0.00 0.00 0.00 4.18
2614 4359 6.697455 CCAATATTCGTGTATCTCATATCCGG 59.303 42.308 0.00 0.00 0.00 5.14
2615 4360 7.258441 CAATATTCGTGTATCTCATATCCGGT 58.742 38.462 0.00 0.00 0.00 5.28
2616 4361 4.761235 TTCGTGTATCTCATATCCGGTC 57.239 45.455 0.00 0.00 0.00 4.79
2617 4362 3.079578 TCGTGTATCTCATATCCGGTCC 58.920 50.000 0.00 0.00 0.00 4.46
2618 4363 2.163815 CGTGTATCTCATATCCGGTCCC 59.836 54.545 0.00 0.00 0.00 4.46
2619 4364 3.432378 GTGTATCTCATATCCGGTCCCT 58.568 50.000 0.00 0.00 0.00 4.20
2620 4365 3.444388 GTGTATCTCATATCCGGTCCCTC 59.556 52.174 0.00 0.00 0.00 4.30
2621 4366 3.075432 TGTATCTCATATCCGGTCCCTCA 59.925 47.826 0.00 0.00 0.00 3.86
2622 4367 3.481559 ATCTCATATCCGGTCCCTCAT 57.518 47.619 0.00 0.00 0.00 2.90
2623 4368 4.609866 ATCTCATATCCGGTCCCTCATA 57.390 45.455 0.00 0.00 0.00 2.15
2624 4369 4.609866 TCTCATATCCGGTCCCTCATAT 57.390 45.455 0.00 0.00 0.00 1.78
2625 4370 4.537751 TCTCATATCCGGTCCCTCATATC 58.462 47.826 0.00 0.00 0.00 1.63
2626 4371 3.639094 CTCATATCCGGTCCCTCATATCC 59.361 52.174 0.00 0.00 0.00 2.59
2627 4372 3.012388 TCATATCCGGTCCCTCATATCCA 59.988 47.826 0.00 0.00 0.00 3.41
2628 4373 2.649742 ATCCGGTCCCTCATATCCAT 57.350 50.000 0.00 0.00 0.00 3.41
2629 4374 3.776731 ATCCGGTCCCTCATATCCATA 57.223 47.619 0.00 0.00 0.00 2.74
2630 4375 2.816411 TCCGGTCCCTCATATCCATAC 58.184 52.381 0.00 0.00 0.00 2.39
2631 4376 2.382305 TCCGGTCCCTCATATCCATACT 59.618 50.000 0.00 0.00 0.00 2.12
2632 4377 3.594685 TCCGGTCCCTCATATCCATACTA 59.405 47.826 0.00 0.00 0.00 1.82
2633 4378 4.044952 TCCGGTCCCTCATATCCATACTAA 59.955 45.833 0.00 0.00 0.00 2.24
2634 4379 4.159879 CCGGTCCCTCATATCCATACTAAC 59.840 50.000 0.00 0.00 0.00 2.34
2635 4380 4.770531 CGGTCCCTCATATCCATACTAACA 59.229 45.833 0.00 0.00 0.00 2.41
2636 4381 5.245301 CGGTCCCTCATATCCATACTAACAA 59.755 44.000 0.00 0.00 0.00 2.83
2637 4382 6.070767 CGGTCCCTCATATCCATACTAACAAT 60.071 42.308 0.00 0.00 0.00 2.71
2638 4383 7.527196 CGGTCCCTCATATCCATACTAACAATT 60.527 40.741 0.00 0.00 0.00 2.32
2639 4384 8.822805 GGTCCCTCATATCCATACTAACAATTA 58.177 37.037 0.00 0.00 0.00 1.40
2671 4416 6.589830 AAAAAGAACGTAGATCATCGATGG 57.410 37.500 24.61 10.25 0.00 3.51
2672 4417 5.515797 AAAGAACGTAGATCATCGATGGA 57.484 39.130 24.61 12.15 0.00 3.41
2673 4418 5.713792 AAGAACGTAGATCATCGATGGAT 57.286 39.130 24.61 16.12 0.00 3.41
2707 4452 9.814899 AAATTGTCAAAGTTCACATAATTCACA 57.185 25.926 0.00 0.00 0.00 3.58
2708 4453 9.985730 AATTGTCAAAGTTCACATAATTCACAT 57.014 25.926 0.00 0.00 0.00 3.21
2748 4493 8.807667 TTACTAAAAACTAGAACTGAAGACGG 57.192 34.615 0.00 0.00 0.00 4.79
2749 4494 7.047460 ACTAAAAACTAGAACTGAAGACGGA 57.953 36.000 0.00 0.00 0.00 4.69
2750 4495 7.146648 ACTAAAAACTAGAACTGAAGACGGAG 58.853 38.462 0.00 0.00 0.00 4.63
2751 4496 5.786264 AAAACTAGAACTGAAGACGGAGA 57.214 39.130 0.00 0.00 0.00 3.71
2752 4497 4.769859 AACTAGAACTGAAGACGGAGAC 57.230 45.455 0.00 0.00 0.00 3.36
2765 4510 3.626154 GGAGACGACGGAGATTCAC 57.374 57.895 0.00 0.00 0.00 3.18
2766 4511 0.100861 GGAGACGACGGAGATTCACC 59.899 60.000 0.00 0.00 0.00 4.02
2767 4512 0.809385 GAGACGACGGAGATTCACCA 59.191 55.000 0.00 0.00 0.00 4.17
2768 4513 0.526662 AGACGACGGAGATTCACCAC 59.473 55.000 0.00 0.00 0.00 4.16
2769 4514 0.526662 GACGACGGAGATTCACCACT 59.473 55.000 0.00 0.00 0.00 4.00
2770 4515 0.966920 ACGACGGAGATTCACCACTT 59.033 50.000 0.00 0.00 0.00 3.16
2771 4516 1.067776 ACGACGGAGATTCACCACTTC 60.068 52.381 0.00 0.00 0.00 3.01
2772 4517 1.736032 CGACGGAGATTCACCACTTCC 60.736 57.143 0.97 0.00 0.00 3.46
2773 4518 1.550976 GACGGAGATTCACCACTTCCT 59.449 52.381 0.97 0.00 0.00 3.36
2774 4519 1.550976 ACGGAGATTCACCACTTCCTC 59.449 52.381 0.97 0.00 0.00 3.71
2775 4520 1.469940 CGGAGATTCACCACTTCCTCG 60.470 57.143 0.97 0.00 0.00 4.63
2776 4521 1.646189 GAGATTCACCACTTCCTCGC 58.354 55.000 0.00 0.00 0.00 5.03
2777 4522 0.250513 AGATTCACCACTTCCTCGCC 59.749 55.000 0.00 0.00 0.00 5.54
2778 4523 1.079127 ATTCACCACTTCCTCGCCG 60.079 57.895 0.00 0.00 0.00 6.46
2779 4524 2.521958 ATTCACCACTTCCTCGCCGG 62.522 60.000 0.00 0.00 0.00 6.13
2785 4530 4.410400 CTTCCTCGCCGGCCCTTT 62.410 66.667 23.46 0.00 0.00 3.11
2786 4531 4.715523 TTCCTCGCCGGCCCTTTG 62.716 66.667 23.46 6.36 0.00 2.77
2796 4541 4.678743 GCCCTTTGCCCTTCCGGT 62.679 66.667 0.00 0.00 0.00 5.28
2797 4542 2.361230 CCCTTTGCCCTTCCGGTC 60.361 66.667 0.00 0.00 0.00 4.79
2798 4543 2.746277 CCTTTGCCCTTCCGGTCG 60.746 66.667 0.00 0.00 0.00 4.79
2799 4544 3.431725 CTTTGCCCTTCCGGTCGC 61.432 66.667 0.00 0.00 0.00 5.19
2821 4566 3.488090 GCAACTGTAGGCGTCGGC 61.488 66.667 11.43 11.43 38.90 5.54
2822 4567 3.179265 CAACTGTAGGCGTCGGCG 61.179 66.667 13.61 4.29 41.24 6.46
2823 4568 4.430765 AACTGTAGGCGTCGGCGG 62.431 66.667 13.05 7.71 41.24 6.13
2839 4584 4.778143 GGCTGGTGGCGGATCGTT 62.778 66.667 0.00 0.00 42.94 3.85
2840 4585 3.195698 GCTGGTGGCGGATCGTTC 61.196 66.667 0.00 0.00 0.00 3.95
2841 4586 2.885644 CTGGTGGCGGATCGTTCG 60.886 66.667 0.00 0.00 0.00 3.95
2842 4587 3.350909 CTGGTGGCGGATCGTTCGA 62.351 63.158 0.00 0.00 0.00 3.71
2843 4588 2.582498 GGTGGCGGATCGTTCGAG 60.582 66.667 0.80 0.00 0.00 4.04
2844 4589 2.181021 GTGGCGGATCGTTCGAGT 59.819 61.111 0.80 0.00 0.00 4.18
2845 4590 1.872679 GTGGCGGATCGTTCGAGTC 60.873 63.158 0.80 0.00 0.00 3.36
2846 4591 2.651232 GGCGGATCGTTCGAGTCG 60.651 66.667 6.09 6.09 0.00 4.18
2847 4592 2.099831 GCGGATCGTTCGAGTCGT 59.900 61.111 13.12 0.00 0.00 4.34
2848 4593 1.933519 GCGGATCGTTCGAGTCGTC 60.934 63.158 13.12 1.76 0.00 4.20
2850 4595 1.297451 GGATCGTTCGAGTCGTCGG 60.297 63.158 23.40 11.33 46.80 4.79
2851 4596 1.699656 GGATCGTTCGAGTCGTCGGA 61.700 60.000 23.40 15.19 46.80 4.55
2852 4597 0.315220 GATCGTTCGAGTCGTCGGAG 60.315 60.000 23.40 10.06 46.80 4.63
2853 4598 1.703438 ATCGTTCGAGTCGTCGGAGG 61.703 60.000 23.40 11.37 46.80 4.30
2854 4599 2.385875 CGTTCGAGTCGTCGGAGGA 61.386 63.158 13.12 0.00 46.80 3.71
2855 4600 1.424635 GTTCGAGTCGTCGGAGGAG 59.575 63.158 13.12 0.00 46.80 3.69
2856 4601 2.396955 TTCGAGTCGTCGGAGGAGC 61.397 63.158 13.12 0.00 46.80 4.70
2857 4602 2.799814 TTCGAGTCGTCGGAGGAGCT 62.800 60.000 13.12 0.00 46.80 4.09
2858 4603 2.795297 GAGTCGTCGGAGGAGCTG 59.205 66.667 0.00 0.00 0.00 4.24
2859 4604 2.034376 AGTCGTCGGAGGAGCTGT 59.966 61.111 0.00 0.00 0.00 4.40
2860 4605 1.984321 GAGTCGTCGGAGGAGCTGTC 61.984 65.000 0.00 0.00 0.00 3.51
2861 4606 2.750637 TCGTCGGAGGAGCTGTCC 60.751 66.667 0.00 0.00 44.33 4.02
2869 4614 2.486042 GGAGCTGTCCGAGACGTC 59.514 66.667 7.70 7.70 34.95 4.34
2870 4615 2.098680 GAGCTGTCCGAGACGTCG 59.901 66.667 10.46 0.00 46.39 5.12
2871 4616 2.668889 AGCTGTCCGAGACGTCGT 60.669 61.111 10.46 0.00 45.30 4.34
2872 4617 2.202324 GCTGTCCGAGACGTCGTC 60.202 66.667 17.70 17.70 45.30 4.20
2873 4618 2.096030 CTGTCCGAGACGTCGTCG 59.904 66.667 22.35 22.35 45.30 5.12
2883 4628 3.473166 CGTCGTCGTCGGAGTCGA 61.473 66.667 3.90 0.00 46.69 4.20
2888 4633 3.886340 TCGTCGGAGTCGAAGAGG 58.114 61.111 0.80 0.00 45.81 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.134127 GATGGTGACGCCCTTGGC 61.134 66.667 1.74 0.00 46.75 4.52
8 9 2.040544 GTGATGGTGACGCCCTTGG 61.041 63.158 1.74 0.00 36.04 3.61
9 10 2.040544 GGTGATGGTGACGCCCTTG 61.041 63.158 1.74 0.00 36.04 3.61
10 11 2.351276 GGTGATGGTGACGCCCTT 59.649 61.111 1.74 0.00 36.04 3.95
11 12 4.082523 CGGTGATGGTGACGCCCT 62.083 66.667 1.74 0.00 36.04 5.19
19 20 4.856801 GATGGCCGCGGTGATGGT 62.857 66.667 28.70 7.17 0.00 3.55
32 33 0.467384 ATCTGGTCTTCAGCCGATGG 59.533 55.000 0.00 0.00 43.06 3.51
33 34 1.134580 ACATCTGGTCTTCAGCCGATG 60.135 52.381 0.00 0.00 43.06 3.84
34 35 1.198713 ACATCTGGTCTTCAGCCGAT 58.801 50.000 0.00 0.00 43.06 4.18
35 36 0.976641 AACATCTGGTCTTCAGCCGA 59.023 50.000 0.00 0.00 43.06 5.54
36 37 1.338105 TGAACATCTGGTCTTCAGCCG 60.338 52.381 0.00 0.00 43.06 5.52
37 38 2.479566 TGAACATCTGGTCTTCAGCC 57.520 50.000 0.00 0.00 43.06 4.85
38 39 2.941720 GGATGAACATCTGGTCTTCAGC 59.058 50.000 13.34 2.29 43.06 4.26
39 40 4.081254 TCTGGATGAACATCTGGTCTTCAG 60.081 45.833 13.34 10.27 44.68 3.02
40 41 3.840078 TCTGGATGAACATCTGGTCTTCA 59.160 43.478 13.34 0.20 37.58 3.02
41 42 4.478206 TCTGGATGAACATCTGGTCTTC 57.522 45.455 13.34 3.22 37.92 2.87
42 43 4.141528 GGATCTGGATGAACATCTGGTCTT 60.142 45.833 13.34 0.00 37.92 3.01
43 44 3.390639 GGATCTGGATGAACATCTGGTCT 59.609 47.826 13.34 0.00 37.92 3.85
44 45 3.737850 GGATCTGGATGAACATCTGGTC 58.262 50.000 13.34 11.68 37.92 4.02
45 46 2.103771 CGGATCTGGATGAACATCTGGT 59.896 50.000 13.34 4.78 37.92 4.00
46 47 2.103771 ACGGATCTGGATGAACATCTGG 59.896 50.000 6.47 7.62 37.92 3.86
47 48 3.388308 GACGGATCTGGATGAACATCTG 58.612 50.000 6.47 7.92 37.92 2.90
48 49 2.366916 GGACGGATCTGGATGAACATCT 59.633 50.000 6.47 0.00 37.92 2.90
49 50 2.548920 GGGACGGATCTGGATGAACATC 60.549 54.545 6.47 6.28 37.11 3.06
50 51 1.417890 GGGACGGATCTGGATGAACAT 59.582 52.381 6.47 0.00 0.00 2.71
51 52 0.830648 GGGACGGATCTGGATGAACA 59.169 55.000 6.47 0.00 0.00 3.18
52 53 0.830648 TGGGACGGATCTGGATGAAC 59.169 55.000 6.47 0.00 0.00 3.18
53 54 1.486310 CTTGGGACGGATCTGGATGAA 59.514 52.381 6.47 0.00 0.00 2.57
54 55 1.123077 CTTGGGACGGATCTGGATGA 58.877 55.000 6.47 0.00 0.00 2.92
55 56 1.123077 TCTTGGGACGGATCTGGATG 58.877 55.000 6.47 0.00 0.00 3.51
56 57 1.486726 GTTCTTGGGACGGATCTGGAT 59.513 52.381 6.47 0.00 0.00 3.41
57 58 0.902531 GTTCTTGGGACGGATCTGGA 59.097 55.000 6.47 0.00 0.00 3.86
58 59 0.613260 TGTTCTTGGGACGGATCTGG 59.387 55.000 6.47 0.00 0.00 3.86
59 60 2.555199 GATGTTCTTGGGACGGATCTG 58.445 52.381 0.00 0.00 0.00 2.90
60 61 1.486726 GGATGTTCTTGGGACGGATCT 59.513 52.381 0.00 0.00 0.00 2.75
61 62 1.209504 TGGATGTTCTTGGGACGGATC 59.790 52.381 0.00 0.00 0.00 3.36
62 63 1.285280 TGGATGTTCTTGGGACGGAT 58.715 50.000 0.00 0.00 0.00 4.18
63 64 1.003118 CTTGGATGTTCTTGGGACGGA 59.997 52.381 0.00 0.00 0.00 4.69
64 65 1.453155 CTTGGATGTTCTTGGGACGG 58.547 55.000 0.00 0.00 0.00 4.79
65 66 0.804989 GCTTGGATGTTCTTGGGACG 59.195 55.000 0.00 0.00 0.00 4.79
66 67 0.804989 CGCTTGGATGTTCTTGGGAC 59.195 55.000 0.00 0.00 0.00 4.46
67 68 0.400213 ACGCTTGGATGTTCTTGGGA 59.600 50.000 0.00 0.00 0.00 4.37
68 69 1.737793 GTACGCTTGGATGTTCTTGGG 59.262 52.381 0.00 0.00 0.00 4.12
69 70 2.416547 CAGTACGCTTGGATGTTCTTGG 59.583 50.000 0.00 0.00 0.00 3.61
70 71 2.416547 CCAGTACGCTTGGATGTTCTTG 59.583 50.000 0.00 0.00 0.00 3.02
71 72 2.038557 ACCAGTACGCTTGGATGTTCTT 59.961 45.455 6.63 0.00 0.00 2.52
72 73 1.623811 ACCAGTACGCTTGGATGTTCT 59.376 47.619 6.63 0.00 0.00 3.01
73 74 2.000447 GACCAGTACGCTTGGATGTTC 59.000 52.381 6.63 0.00 0.00 3.18
74 75 1.671850 CGACCAGTACGCTTGGATGTT 60.672 52.381 6.63 0.00 0.00 2.71
75 76 0.108804 CGACCAGTACGCTTGGATGT 60.109 55.000 6.63 0.00 0.00 3.06
76 77 0.806102 CCGACCAGTACGCTTGGATG 60.806 60.000 6.63 0.00 0.00 3.51
77 78 1.515954 CCGACCAGTACGCTTGGAT 59.484 57.895 6.63 0.00 0.00 3.41
78 79 2.642254 CCCGACCAGTACGCTTGGA 61.642 63.158 6.63 0.00 0.00 3.53
79 80 2.125673 CCCGACCAGTACGCTTGG 60.126 66.667 0.00 0.00 0.00 3.61
80 81 1.445582 GTCCCGACCAGTACGCTTG 60.446 63.158 0.00 0.00 0.00 4.01
81 82 2.968206 GTCCCGACCAGTACGCTT 59.032 61.111 0.00 0.00 0.00 4.68
82 83 3.437795 CGTCCCGACCAGTACGCT 61.438 66.667 0.00 0.00 0.00 5.07
83 84 3.741476 ACGTCCCGACCAGTACGC 61.741 66.667 0.00 0.00 38.87 4.42
84 85 2.177531 CACGTCCCGACCAGTACG 59.822 66.667 0.00 0.00 40.99 3.67
85 86 2.126189 GCACGTCCCGACCAGTAC 60.126 66.667 0.00 0.00 0.00 2.73
86 87 3.740397 CGCACGTCCCGACCAGTA 61.740 66.667 0.00 0.00 0.00 2.74
88 89 4.351938 TTCGCACGTCCCGACCAG 62.352 66.667 7.28 0.00 34.01 4.00
89 90 4.351938 CTTCGCACGTCCCGACCA 62.352 66.667 7.28 0.00 34.01 4.02
100 101 2.048222 CGGACTCTTGCCTTCGCA 60.048 61.111 0.00 0.00 45.49 5.10
149 158 1.738099 CGTTTGCGCTAGCCAGACT 60.738 57.895 9.73 0.00 44.33 3.24
158 167 1.393539 CTATGCTTGTACGTTTGCGCT 59.606 47.619 9.73 0.00 42.83 5.92
165 174 1.404391 CCCTCGACTATGCTTGTACGT 59.596 52.381 0.00 0.00 0.00 3.57
292 302 0.759812 TATAATGGGTGGACCGCGGA 60.760 55.000 35.90 6.51 44.64 5.54
338 361 1.282875 CGCGGTCTGATATGCTCGA 59.717 57.895 0.00 0.00 0.00 4.04
345 368 1.725557 GCTCTCCACGCGGTCTGATA 61.726 60.000 12.47 0.00 0.00 2.15
357 380 2.285668 CCTTCCTGGGGCTCTCCA 60.286 66.667 0.00 0.00 37.22 3.86
371 394 4.400961 GACTCCTGCGGCTGCCTT 62.401 66.667 16.57 0.00 41.78 4.35
390 413 4.676586 CGCCGTCCGTTTTGTGCC 62.677 66.667 0.00 0.00 0.00 5.01
409 1301 1.896694 CTCGGCAAGGAAGCTCTCT 59.103 57.895 0.00 0.00 34.17 3.10
416 1308 2.172483 GAGACCTGCTCGGCAAGGAA 62.172 60.000 15.64 0.00 38.41 3.36
429 1321 0.681564 CCGACCAGTGCTAGAGACCT 60.682 60.000 0.00 0.00 0.00 3.85
476 1368 1.495584 GACTGGTTTGCTCGCGACAA 61.496 55.000 3.71 12.35 0.00 3.18
478 1370 2.668280 GGACTGGTTTGCTCGCGAC 61.668 63.158 3.71 2.83 0.00 5.19
485 1377 2.954753 CTGCGTCGGACTGGTTTGC 61.955 63.158 6.57 1.67 0.00 3.68
506 1398 1.248486 CCTGTCTGTCGGAGTCTTCA 58.752 55.000 0.00 0.00 0.00 3.02
507 1399 1.200484 GACCTGTCTGTCGGAGTCTTC 59.800 57.143 0.00 0.00 0.00 2.87
545 1437 3.436055 TTACGCATGTTGCCCCGC 61.436 61.111 0.00 0.00 41.12 6.13
558 1450 0.874607 GGCCATCGTGCTAGGTTACG 60.875 60.000 0.00 0.00 41.38 3.18
561 1453 0.753262 CTAGGCCATCGTGCTAGGTT 59.247 55.000 5.01 0.00 0.00 3.50
570 1462 4.227134 ACGCAGCCTAGGCCATCG 62.227 66.667 30.42 28.74 43.17 3.84
572 1464 3.866582 GGACGCAGCCTAGGCCAT 61.867 66.667 30.42 13.22 43.17 4.40
578 1470 3.755628 GACCGTGGACGCAGCCTA 61.756 66.667 0.00 0.00 38.18 3.93
582 1474 1.663379 TAGATGGACCGTGGACGCAG 61.663 60.000 0.00 0.00 38.18 5.18
583 1475 1.040893 ATAGATGGACCGTGGACGCA 61.041 55.000 0.00 0.00 38.18 5.24
590 1482 2.368875 GGGTTCATGATAGATGGACCGT 59.631 50.000 0.00 0.00 46.40 4.83
600 1492 0.758734 CGCCTCAGGGGTTCATGATA 59.241 55.000 0.00 0.00 32.96 2.15
614 1506 3.140225 GATCCAGACGGGTCGCCTC 62.140 68.421 0.00 0.00 31.02 4.70
617 1509 4.570663 CGGATCCAGACGGGTCGC 62.571 72.222 13.41 0.00 44.28 5.19
746 1826 1.138266 GCCTAGCTCCAATCCGTACAA 59.862 52.381 0.00 0.00 0.00 2.41
884 1967 1.269517 GCTATCCTCGGTTGCTCTCAG 60.270 57.143 0.00 0.00 0.00 3.35
997 2080 2.213499 CTTGGGATGAGTACGCATTCC 58.787 52.381 25.72 25.72 43.17 3.01
1055 2138 2.295070 ACGCAATTACCAAAGAACCACC 59.705 45.455 0.00 0.00 0.00 4.61
1080 2163 1.134220 TGAGGAAAAAGGACGTGTGCT 60.134 47.619 0.00 0.00 0.00 4.40
1151 2234 3.988379 TCAAGCAGAAAATCACACCAC 57.012 42.857 0.00 0.00 0.00 4.16
1204 2287 8.526147 CCAACTTCAGAGAATGTTTATTTGGAT 58.474 33.333 0.00 0.00 0.00 3.41
1213 2296 4.202326 ACCGTACCAACTTCAGAGAATGTT 60.202 41.667 0.00 0.00 0.00 2.71
1215 2298 3.926616 ACCGTACCAACTTCAGAGAATG 58.073 45.455 0.00 0.00 0.00 2.67
1336 2420 3.165498 CGGGTACACGCTTGCTTC 58.835 61.111 3.72 0.00 0.00 3.86
1518 2602 4.996122 GCATGCTATGTAGAGAAATGAGCT 59.004 41.667 11.37 0.00 0.00 4.09
1564 2648 5.297776 CGAGTAATTTAGAACGGAGGGAGTA 59.702 44.000 0.00 0.00 0.00 2.59
1565 2649 4.097589 CGAGTAATTTAGAACGGAGGGAGT 59.902 45.833 0.00 0.00 0.00 3.85
1566 2650 4.097589 ACGAGTAATTTAGAACGGAGGGAG 59.902 45.833 0.00 0.00 0.00 4.30
1567 2651 4.019174 ACGAGTAATTTAGAACGGAGGGA 58.981 43.478 0.00 0.00 0.00 4.20
1568 2652 4.357996 GACGAGTAATTTAGAACGGAGGG 58.642 47.826 0.00 0.00 0.00 4.30
1569 2653 4.033684 CGACGAGTAATTTAGAACGGAGG 58.966 47.826 0.00 0.00 0.00 4.30
1570 2654 3.481388 GCGACGAGTAATTTAGAACGGAG 59.519 47.826 0.00 0.00 0.00 4.63
1571 2655 3.119884 TGCGACGAGTAATTTAGAACGGA 60.120 43.478 0.00 0.00 0.00 4.69
1572 2656 3.173599 TGCGACGAGTAATTTAGAACGG 58.826 45.455 0.00 0.00 0.00 4.44
1573 2657 4.093514 TCTGCGACGAGTAATTTAGAACG 58.906 43.478 0.00 0.00 0.00 3.95
1574 2658 6.385537 TTTCTGCGACGAGTAATTTAGAAC 57.614 37.500 0.00 0.00 0.00 3.01
1575 2659 6.035650 CCATTTCTGCGACGAGTAATTTAGAA 59.964 38.462 0.00 0.00 0.00 2.10
1576 2660 5.518847 CCATTTCTGCGACGAGTAATTTAGA 59.481 40.000 0.00 0.00 0.00 2.10
1577 2661 5.518847 TCCATTTCTGCGACGAGTAATTTAG 59.481 40.000 0.00 0.00 0.00 1.85
1578 2662 5.412640 TCCATTTCTGCGACGAGTAATTTA 58.587 37.500 0.00 0.00 0.00 1.40
1579 2663 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
1580 2664 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
1581 2665 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
1582 2666 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
1583 2667 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
1584 2668 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
1585 2669 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
1586 2670 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
1587 2671 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
1588 2672 6.844696 TTTAGATACATCCATTTCTGCGAC 57.155 37.500 0.00 0.00 0.00 5.19
1589 2673 7.047891 AGTTTTAGATACATCCATTTCTGCGA 58.952 34.615 0.00 0.00 0.00 5.10
1590 2674 7.251704 AGTTTTAGATACATCCATTTCTGCG 57.748 36.000 0.00 0.00 0.00 5.18
1636 2720 9.314321 CCGTTCTGAATTACTTGTCATAAGTAT 57.686 33.333 0.00 0.00 33.27 2.12
1637 2721 8.525316 TCCGTTCTGAATTACTTGTCATAAGTA 58.475 33.333 0.00 0.00 0.00 2.24
1638 2722 7.383687 TCCGTTCTGAATTACTTGTCATAAGT 58.616 34.615 0.00 0.00 0.00 2.24
1639 2723 7.010552 CCTCCGTTCTGAATTACTTGTCATAAG 59.989 40.741 0.00 0.00 0.00 1.73
1640 2724 6.816640 CCTCCGTTCTGAATTACTTGTCATAA 59.183 38.462 0.00 0.00 0.00 1.90
1641 2725 6.338146 CCTCCGTTCTGAATTACTTGTCATA 58.662 40.000 0.00 0.00 0.00 2.15
1642 2726 5.178797 CCTCCGTTCTGAATTACTTGTCAT 58.821 41.667 0.00 0.00 0.00 3.06
1643 2727 4.562757 CCCTCCGTTCTGAATTACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
1644 2728 3.933332 CCCTCCGTTCTGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
1645 2729 3.581332 TCCCTCCGTTCTGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
1646 2730 4.184629 CTCCCTCCGTTCTGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
1647 2731 3.838903 ACTCCCTCCGTTCTGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
1648 2732 3.442076 ACTCCCTCCGTTCTGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
1649 2733 3.889520 ACTCCCTCCGTTCTGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
1650 2734 4.607239 ACTACTCCCTCCGTTCTGAATTA 58.393 43.478 0.00 0.00 0.00 1.40
1651 2735 3.442076 ACTACTCCCTCCGTTCTGAATT 58.558 45.455 0.00 0.00 0.00 2.17
1652 2736 3.103080 ACTACTCCCTCCGTTCTGAAT 57.897 47.619 0.00 0.00 0.00 2.57
1653 2737 2.599408 ACTACTCCCTCCGTTCTGAA 57.401 50.000 0.00 0.00 0.00 3.02
1654 2738 3.947612 ATACTACTCCCTCCGTTCTGA 57.052 47.619 0.00 0.00 0.00 3.27
1655 2739 6.319152 CCATATATACTACTCCCTCCGTTCTG 59.681 46.154 0.00 0.00 0.00 3.02
1656 2740 6.424883 CCATATATACTACTCCCTCCGTTCT 58.575 44.000 0.00 0.00 0.00 3.01
1657 2741 5.593502 CCCATATATACTACTCCCTCCGTTC 59.406 48.000 0.00 0.00 0.00 3.95
1658 2742 5.516984 CCCATATATACTACTCCCTCCGTT 58.483 45.833 0.00 0.00 0.00 4.44
1659 2743 4.630676 GCCCATATATACTACTCCCTCCGT 60.631 50.000 0.00 0.00 0.00 4.69
1660 2744 3.890147 GCCCATATATACTACTCCCTCCG 59.110 52.174 0.00 0.00 0.00 4.63
1661 2745 5.145513 AGCCCATATATACTACTCCCTCC 57.854 47.826 0.00 0.00 0.00 4.30
1662 2746 6.440965 ACAAAGCCCATATATACTACTCCCTC 59.559 42.308 0.00 0.00 0.00 4.30
1663 2747 6.331846 ACAAAGCCCATATATACTACTCCCT 58.668 40.000 0.00 0.00 0.00 4.20
1664 2748 6.622427 ACAAAGCCCATATATACTACTCCC 57.378 41.667 0.00 0.00 0.00 4.30
1665 2749 8.258708 CCTAACAAAGCCCATATATACTACTCC 58.741 40.741 0.00 0.00 0.00 3.85
1666 2750 7.764901 GCCTAACAAAGCCCATATATACTACTC 59.235 40.741 0.00 0.00 0.00 2.59
1667 2751 7.311109 GGCCTAACAAAGCCCATATATACTACT 60.311 40.741 0.00 0.00 43.76 2.57
1668 2752 6.822170 GGCCTAACAAAGCCCATATATACTAC 59.178 42.308 0.00 0.00 43.76 2.73
1669 2753 6.954232 GGCCTAACAAAGCCCATATATACTA 58.046 40.000 0.00 0.00 43.76 1.82
1670 2754 5.816682 GGCCTAACAAAGCCCATATATACT 58.183 41.667 0.00 0.00 43.76 2.12
1748 2846 3.573229 AGCAGCAGGACAGCCCAA 61.573 61.111 0.00 0.00 37.41 4.12
1757 2855 1.863662 CTCCAACAAGCAGCAGCAGG 61.864 60.000 3.17 0.00 45.49 4.85
1807 2905 1.000607 GACACACGTCTCAGCAGGTAA 60.001 52.381 0.00 0.00 39.22 2.85
1849 2952 1.719529 TCAACTTGAGTACCCGGGAA 58.280 50.000 32.02 9.85 0.00 3.97
1853 2956 3.463944 AGTTGTTCAACTTGAGTACCCG 58.536 45.455 11.75 0.00 0.00 5.28
1856 2959 5.880341 AGCAAAGTTGTTCAACTTGAGTAC 58.120 37.500 25.00 15.28 41.76 2.73
1885 2988 5.240623 GGAGTACAGATGAGACCATAGTCAG 59.759 48.000 0.00 0.00 46.15 3.51
1894 2997 5.416326 AGTTACACAGGAGTACAGATGAGAC 59.584 44.000 0.00 0.00 0.00 3.36
1911 3016 9.856488 TTATTTCACTCATGTCTAGAGTTACAC 57.144 33.333 0.00 0.00 43.47 2.90
1928 3033 3.285484 CTGGCAGCCTCATTATTTCACT 58.715 45.455 14.15 0.00 0.00 3.41
1981 3086 1.095600 CGTACAGTAGGAGCTCAGCA 58.904 55.000 17.19 0.00 0.00 4.41
1982 3087 1.096416 ACGTACAGTAGGAGCTCAGC 58.904 55.000 17.19 4.66 0.00 4.26
1983 3088 2.488545 ACAACGTACAGTAGGAGCTCAG 59.511 50.000 17.19 2.00 0.00 3.35
1984 3089 2.228103 CACAACGTACAGTAGGAGCTCA 59.772 50.000 17.19 0.00 0.00 4.26
2042 3342 1.653920 CGCGTCGTCGTTTCAGACTC 61.654 60.000 0.00 0.00 38.90 3.36
2180 3496 1.061570 GTCGCCGAGTCGTCGTAAT 59.938 57.895 16.10 0.00 45.30 1.89
2181 3497 2.029288 AGTCGCCGAGTCGTCGTAA 61.029 57.895 16.10 0.00 45.30 3.18
2182 3498 2.433145 AGTCGCCGAGTCGTCGTA 60.433 61.111 16.10 0.00 45.30 3.43
2183 3499 4.086178 CAGTCGCCGAGTCGTCGT 62.086 66.667 16.10 0.00 45.30 4.34
2185 3501 4.400109 TGCAGTCGCCGAGTCGTC 62.400 66.667 12.31 0.00 37.32 4.20
2186 3502 4.702081 GTGCAGTCGCCGAGTCGT 62.702 66.667 12.31 0.00 37.32 4.34
2359 4104 1.235724 GCGATACAGGGGTATTTGGC 58.764 55.000 0.00 0.00 40.28 4.52
2365 4110 0.394762 AGACGTGCGATACAGGGGTA 60.395 55.000 0.00 0.00 38.50 3.69
2373 4118 2.407616 CGGCAGAGACGTGCGATA 59.592 61.111 0.00 0.00 45.00 2.92
2389 4134 3.576356 GTGGATGTGGATGCGGCG 61.576 66.667 0.51 0.51 0.00 6.46
2394 4139 0.539518 TACGGGTGTGGATGTGGATG 59.460 55.000 0.00 0.00 0.00 3.51
2395 4140 0.539986 GTACGGGTGTGGATGTGGAT 59.460 55.000 0.00 0.00 0.00 3.41
2396 4141 0.543410 AGTACGGGTGTGGATGTGGA 60.543 55.000 0.00 0.00 0.00 4.02
2397 4142 0.108329 GAGTACGGGTGTGGATGTGG 60.108 60.000 0.00 0.00 0.00 4.17
2398 4143 0.457853 CGAGTACGGGTGTGGATGTG 60.458 60.000 0.00 0.00 35.72 3.21
2399 4144 0.896940 ACGAGTACGGGTGTGGATGT 60.897 55.000 0.00 0.00 44.46 3.06
2405 4150 1.364626 CTAGCGACGAGTACGGGTGT 61.365 60.000 0.00 0.00 44.46 4.16
2410 4155 2.720578 CTCTAGACTAGCGACGAGTACG 59.279 54.545 4.47 0.00 45.75 3.67
2411 4156 2.472488 GCTCTAGACTAGCGACGAGTAC 59.528 54.545 4.47 0.00 0.00 2.73
2434 4179 2.596851 GGCTCCCAACTCCAGCAGA 61.597 63.158 0.00 0.00 34.62 4.26
2435 4180 1.267574 TAGGCTCCCAACTCCAGCAG 61.268 60.000 0.00 0.00 34.62 4.24
2436 4181 1.229496 TAGGCTCCCAACTCCAGCA 60.229 57.895 0.00 0.00 34.62 4.41
2437 4182 1.222113 GTAGGCTCCCAACTCCAGC 59.778 63.158 0.00 0.00 0.00 4.85
2438 4183 0.250513 GTGTAGGCTCCCAACTCCAG 59.749 60.000 0.00 0.00 0.00 3.86
2439 4184 0.472925 TGTGTAGGCTCCCAACTCCA 60.473 55.000 0.00 0.00 0.00 3.86
2440 4185 0.036294 GTGTGTAGGCTCCCAACTCC 60.036 60.000 0.00 0.00 0.00 3.85
2441 4186 0.389948 CGTGTGTAGGCTCCCAACTC 60.390 60.000 0.00 0.00 0.00 3.01
2442 4187 1.671742 CGTGTGTAGGCTCCCAACT 59.328 57.895 0.00 0.00 0.00 3.16
2443 4188 1.375523 CCGTGTGTAGGCTCCCAAC 60.376 63.158 0.00 0.00 0.00 3.77
2444 4189 3.065306 CCGTGTGTAGGCTCCCAA 58.935 61.111 0.00 0.00 0.00 4.12
2451 4196 1.079819 CCTGACTGCCGTGTGTAGG 60.080 63.158 0.00 0.00 0.00 3.18
2452 4197 0.388649 GACCTGACTGCCGTGTGTAG 60.389 60.000 0.00 0.00 0.00 2.74
2453 4198 1.110518 TGACCTGACTGCCGTGTGTA 61.111 55.000 0.00 0.00 0.00 2.90
2454 4199 2.421739 GACCTGACTGCCGTGTGT 59.578 61.111 0.00 0.00 0.00 3.72
2455 4200 1.956170 GTGACCTGACTGCCGTGTG 60.956 63.158 0.00 0.00 0.00 3.82
2456 4201 2.421739 GTGACCTGACTGCCGTGT 59.578 61.111 0.00 0.00 0.00 4.49
2457 4202 2.734723 CGTGACCTGACTGCCGTG 60.735 66.667 0.00 0.00 0.00 4.94
2458 4203 3.208884 GACGTGACCTGACTGCCGT 62.209 63.158 0.00 0.00 0.00 5.68
2459 4204 2.430921 GACGTGACCTGACTGCCG 60.431 66.667 0.00 0.00 0.00 5.69
2460 4205 2.430921 CGACGTGACCTGACTGCC 60.431 66.667 0.00 0.00 0.00 4.85
2461 4206 3.106407 GCGACGTGACCTGACTGC 61.106 66.667 0.00 0.00 0.00 4.40
2462 4207 2.529005 ATCGCGACGTGACCTGACTG 62.529 60.000 12.93 0.00 0.00 3.51
2463 4208 2.254703 GATCGCGACGTGACCTGACT 62.255 60.000 12.93 0.00 0.00 3.41
2464 4209 1.868251 GATCGCGACGTGACCTGAC 60.868 63.158 12.93 0.00 0.00 3.51
2465 4210 2.483745 GATCGCGACGTGACCTGA 59.516 61.111 12.93 0.00 0.00 3.86
2466 4211 2.579787 GGATCGCGACGTGACCTG 60.580 66.667 12.93 0.00 0.00 4.00
2467 4212 2.750637 AGGATCGCGACGTGACCT 60.751 61.111 12.93 17.84 0.00 3.85
2468 4213 2.278013 GAGGATCGCGACGTGACC 60.278 66.667 12.93 15.98 0.00 4.02
2469 4214 1.297745 GAGAGGATCGCGACGTGAC 60.298 63.158 12.93 7.75 42.67 3.67
2470 4215 1.706287 CTGAGAGGATCGCGACGTGA 61.706 60.000 12.93 14.27 42.67 4.35
2471 4216 1.297967 CTGAGAGGATCGCGACGTG 60.298 63.158 12.93 0.94 42.67 4.49
2472 4217 3.102985 CTGAGAGGATCGCGACGT 58.897 61.111 12.93 7.32 42.67 4.34
2473 4218 2.352915 GCTGAGAGGATCGCGACG 60.353 66.667 12.93 0.00 42.67 5.12
2474 4219 1.008995 GAGCTGAGAGGATCGCGAC 60.009 63.158 12.93 5.43 42.67 5.19
2475 4220 2.538448 CGAGCTGAGAGGATCGCGA 61.538 63.158 13.09 13.09 42.67 5.87
2476 4221 2.051435 CGAGCTGAGAGGATCGCG 60.051 66.667 0.00 0.00 42.67 5.87
2477 4222 2.128853 CTCCGAGCTGAGAGGATCGC 62.129 65.000 0.00 0.00 42.68 4.58
2478 4223 0.817634 ACTCCGAGCTGAGAGGATCG 60.818 60.000 8.00 0.00 43.48 3.69
2479 4224 2.264005 TACTCCGAGCTGAGAGGATC 57.736 55.000 8.00 0.00 36.22 3.36
2480 4225 2.173782 TCTTACTCCGAGCTGAGAGGAT 59.826 50.000 8.00 0.00 36.22 3.24
2481 4226 1.560146 TCTTACTCCGAGCTGAGAGGA 59.440 52.381 8.00 0.00 36.22 3.71
2482 4227 1.946768 CTCTTACTCCGAGCTGAGAGG 59.053 57.143 8.00 0.00 36.22 3.69
2490 4235 3.880490 ACAGTAGATGCTCTTACTCCGAG 59.120 47.826 0.00 0.00 0.00 4.63
2491 4236 3.878103 GACAGTAGATGCTCTTACTCCGA 59.122 47.826 0.00 0.00 0.00 4.55
2492 4237 3.303461 CGACAGTAGATGCTCTTACTCCG 60.303 52.174 0.00 0.00 0.00 4.63
2493 4238 3.003897 CCGACAGTAGATGCTCTTACTCC 59.996 52.174 0.00 0.00 0.00 3.85
2494 4239 3.878103 TCCGACAGTAGATGCTCTTACTC 59.122 47.826 0.00 0.00 0.00 2.59
2495 4240 3.887352 TCCGACAGTAGATGCTCTTACT 58.113 45.455 0.00 0.00 0.00 2.24
2496 4241 4.517453 AGATCCGACAGTAGATGCTCTTAC 59.483 45.833 0.00 0.00 0.00 2.34
2497 4242 4.720046 AGATCCGACAGTAGATGCTCTTA 58.280 43.478 0.00 0.00 0.00 2.10
2498 4243 3.561143 AGATCCGACAGTAGATGCTCTT 58.439 45.455 0.00 0.00 0.00 2.85
2499 4244 3.222173 AGATCCGACAGTAGATGCTCT 57.778 47.619 0.00 0.00 0.00 4.09
2500 4245 3.067461 ACAAGATCCGACAGTAGATGCTC 59.933 47.826 0.00 0.00 0.00 4.26
2501 4246 3.027412 ACAAGATCCGACAGTAGATGCT 58.973 45.455 0.00 0.00 0.00 3.79
2502 4247 3.444703 ACAAGATCCGACAGTAGATGC 57.555 47.619 0.00 0.00 0.00 3.91
2503 4248 6.642950 GGATTTACAAGATCCGACAGTAGATG 59.357 42.308 0.00 0.00 34.24 2.90
2504 4249 6.750148 GGATTTACAAGATCCGACAGTAGAT 58.250 40.000 0.00 0.00 34.24 1.98
2505 4250 6.145338 GGATTTACAAGATCCGACAGTAGA 57.855 41.667 0.00 0.00 34.24 2.59
2514 4259 2.640316 AGGCCGGATTTACAAGATCC 57.360 50.000 5.05 0.00 39.76 3.36
2515 4260 4.983671 AAAAGGCCGGATTTACAAGATC 57.016 40.909 5.05 0.00 0.00 2.75
2516 4261 6.844097 TTTAAAAGGCCGGATTTACAAGAT 57.156 33.333 5.05 0.00 0.00 2.40
2517 4262 6.844097 ATTTAAAAGGCCGGATTTACAAGA 57.156 33.333 5.05 0.00 0.00 3.02
2518 4263 7.865889 GGATATTTAAAAGGCCGGATTTACAAG 59.134 37.037 5.05 0.00 0.00 3.16
2519 4264 7.468906 CGGATATTTAAAAGGCCGGATTTACAA 60.469 37.037 5.05 2.42 35.42 2.41
2520 4265 6.016943 CGGATATTTAAAAGGCCGGATTTACA 60.017 38.462 5.05 0.74 35.42 2.41
2521 4266 6.376177 CGGATATTTAAAAGGCCGGATTTAC 58.624 40.000 5.05 0.00 35.42 2.01
2522 4267 5.048573 GCGGATATTTAAAAGGCCGGATTTA 60.049 40.000 20.33 4.41 39.17 1.40
2523 4268 4.261867 GCGGATATTTAAAAGGCCGGATTT 60.262 41.667 20.33 5.52 39.17 2.17
2524 4269 3.254903 GCGGATATTTAAAAGGCCGGATT 59.745 43.478 20.33 0.00 39.17 3.01
2525 4270 2.817844 GCGGATATTTAAAAGGCCGGAT 59.182 45.455 20.33 0.00 39.17 4.18
2526 4271 2.223745 GCGGATATTTAAAAGGCCGGA 58.776 47.619 20.33 0.00 39.17 5.14
2527 4272 1.950909 TGCGGATATTTAAAAGGCCGG 59.049 47.619 20.33 0.00 39.17 6.13
2528 4273 2.875933 TCTGCGGATATTTAAAAGGCCG 59.124 45.455 16.80 16.80 41.51 6.13
2529 4274 3.303791 CGTCTGCGGATATTTAAAAGGCC 60.304 47.826 0.00 0.00 0.00 5.19
2530 4275 3.311596 ACGTCTGCGGATATTTAAAAGGC 59.688 43.478 0.00 0.00 43.45 4.35
2531 4276 4.569162 TCACGTCTGCGGATATTTAAAAGG 59.431 41.667 0.00 0.00 43.45 3.11
2532 4277 5.712217 TCACGTCTGCGGATATTTAAAAG 57.288 39.130 0.00 0.00 43.45 2.27
2533 4278 5.813157 TCATCACGTCTGCGGATATTTAAAA 59.187 36.000 0.00 0.00 43.45 1.52
2534 4279 5.353111 TCATCACGTCTGCGGATATTTAAA 58.647 37.500 0.00 0.00 43.45 1.52
2535 4280 4.939271 TCATCACGTCTGCGGATATTTAA 58.061 39.130 0.00 0.00 43.45 1.52
2536 4281 4.546570 CTCATCACGTCTGCGGATATTTA 58.453 43.478 0.00 0.00 43.45 1.40
2537 4282 3.384668 CTCATCACGTCTGCGGATATTT 58.615 45.455 0.00 0.00 43.45 1.40
2538 4283 2.864097 GCTCATCACGTCTGCGGATATT 60.864 50.000 0.00 0.00 43.45 1.28
2539 4284 1.336332 GCTCATCACGTCTGCGGATAT 60.336 52.381 0.00 0.00 43.45 1.63
2540 4285 0.030773 GCTCATCACGTCTGCGGATA 59.969 55.000 0.00 0.00 43.45 2.59
2541 4286 1.227089 GCTCATCACGTCTGCGGAT 60.227 57.895 0.00 0.00 43.45 4.18
2542 4287 2.181777 GCTCATCACGTCTGCGGA 59.818 61.111 0.00 0.00 43.45 5.54
2543 4288 2.125952 TGCTCATCACGTCTGCGG 60.126 61.111 0.00 0.00 43.45 5.69
2544 4289 3.075998 GTGCTCATCACGTCTGCG 58.924 61.111 0.00 0.00 44.93 5.18
2551 4296 1.090052 GCCCGGTTAGTGCTCATCAC 61.090 60.000 0.00 0.00 45.98 3.06
2552 4297 1.220749 GCCCGGTTAGTGCTCATCA 59.779 57.895 0.00 0.00 0.00 3.07
2553 4298 0.392461 TTGCCCGGTTAGTGCTCATC 60.392 55.000 0.00 0.00 0.00 2.92
2554 4299 0.676782 GTTGCCCGGTTAGTGCTCAT 60.677 55.000 0.00 0.00 0.00 2.90
2555 4300 1.302192 GTTGCCCGGTTAGTGCTCA 60.302 57.895 0.00 0.00 0.00 4.26
2556 4301 2.038837 GGTTGCCCGGTTAGTGCTC 61.039 63.158 0.00 0.00 0.00 4.26
2557 4302 2.033602 GGTTGCCCGGTTAGTGCT 59.966 61.111 0.00 0.00 0.00 4.40
2558 4303 1.583495 GAAGGTTGCCCGGTTAGTGC 61.583 60.000 0.00 0.00 35.12 4.40
2559 4304 0.250553 TGAAGGTTGCCCGGTTAGTG 60.251 55.000 0.00 0.00 35.12 2.74
2560 4305 0.475044 TTGAAGGTTGCCCGGTTAGT 59.525 50.000 0.00 0.00 35.12 2.24
2561 4306 1.611519 TTTGAAGGTTGCCCGGTTAG 58.388 50.000 0.00 0.00 35.12 2.34
2562 4307 2.296073 ATTTGAAGGTTGCCCGGTTA 57.704 45.000 0.00 0.00 35.12 2.85
2563 4308 1.419381 AATTTGAAGGTTGCCCGGTT 58.581 45.000 0.00 0.00 35.12 4.44
2564 4309 2.296073 TAATTTGAAGGTTGCCCGGT 57.704 45.000 0.00 0.00 35.12 5.28
2565 4310 2.495669 ACATAATTTGAAGGTTGCCCGG 59.504 45.455 0.00 0.00 35.12 5.73
2566 4311 3.730662 CGACATAATTTGAAGGTTGCCCG 60.731 47.826 0.00 0.00 35.12 6.13
2567 4312 3.769536 CGACATAATTTGAAGGTTGCCC 58.230 45.455 0.00 0.00 0.00 5.36
2568 4313 3.179048 GCGACATAATTTGAAGGTTGCC 58.821 45.455 0.00 0.00 33.72 4.52
2569 4314 3.179048 GGCGACATAATTTGAAGGTTGC 58.821 45.455 0.00 0.00 37.98 4.17
2570 4315 4.433186 TGGCGACATAATTTGAAGGTTG 57.567 40.909 0.00 0.00 33.40 3.77
2571 4316 5.659440 ATTGGCGACATAATTTGAAGGTT 57.341 34.783 0.00 0.00 42.32 3.50
2572 4317 6.959639 ATATTGGCGACATAATTTGAAGGT 57.040 33.333 0.00 0.00 42.32 3.50
2573 4318 6.578545 CGAATATTGGCGACATAATTTGAAGG 59.421 38.462 0.00 0.00 42.32 3.46
2574 4319 7.112009 CACGAATATTGGCGACATAATTTGAAG 59.888 37.037 16.46 7.70 42.32 3.02
2575 4320 6.909895 CACGAATATTGGCGACATAATTTGAA 59.090 34.615 16.46 0.00 42.32 2.69
2576 4321 6.037720 ACACGAATATTGGCGACATAATTTGA 59.962 34.615 16.46 0.00 42.32 2.69
2577 4322 6.198687 ACACGAATATTGGCGACATAATTTG 58.801 36.000 10.41 10.41 42.32 2.32
2578 4323 6.371809 ACACGAATATTGGCGACATAATTT 57.628 33.333 0.00 0.00 42.32 1.82
2579 4324 7.602644 AGATACACGAATATTGGCGACATAATT 59.397 33.333 0.00 0.00 42.32 1.40
2580 4325 7.097192 AGATACACGAATATTGGCGACATAAT 58.903 34.615 0.00 0.00 42.32 1.28
2581 4326 6.452242 AGATACACGAATATTGGCGACATAA 58.548 36.000 0.00 0.00 42.32 1.90
2582 4327 6.020971 AGATACACGAATATTGGCGACATA 57.979 37.500 0.00 0.00 42.32 2.29
2583 4328 4.883083 AGATACACGAATATTGGCGACAT 58.117 39.130 0.00 0.00 42.32 3.06
2584 4329 4.202070 TGAGATACACGAATATTGGCGACA 60.202 41.667 3.79 0.00 39.83 4.35
2585 4330 4.295870 TGAGATACACGAATATTGGCGAC 58.704 43.478 3.79 0.00 0.00 5.19
2586 4331 4.577834 TGAGATACACGAATATTGGCGA 57.422 40.909 3.79 0.00 0.00 5.54
2587 4332 6.199154 GGATATGAGATACACGAATATTGGCG 59.801 42.308 0.00 0.00 0.00 5.69
2588 4333 6.199154 CGGATATGAGATACACGAATATTGGC 59.801 42.308 0.00 0.00 0.00 4.52
2589 4334 6.697455 CCGGATATGAGATACACGAATATTGG 59.303 42.308 0.00 0.00 0.00 3.16
2590 4335 7.258441 ACCGGATATGAGATACACGAATATTG 58.742 38.462 9.46 0.00 0.00 1.90
2591 4336 7.406031 ACCGGATATGAGATACACGAATATT 57.594 36.000 9.46 0.00 0.00 1.28
2592 4337 6.039493 GGACCGGATATGAGATACACGAATAT 59.961 42.308 9.46 0.00 0.00 1.28
2593 4338 5.356190 GGACCGGATATGAGATACACGAATA 59.644 44.000 9.46 0.00 0.00 1.75
2594 4339 4.158025 GGACCGGATATGAGATACACGAAT 59.842 45.833 9.46 0.00 0.00 3.34
2595 4340 3.504906 GGACCGGATATGAGATACACGAA 59.495 47.826 9.46 0.00 0.00 3.85
2596 4341 3.079578 GGACCGGATATGAGATACACGA 58.920 50.000 9.46 0.00 0.00 4.35
2597 4342 2.163815 GGGACCGGATATGAGATACACG 59.836 54.545 9.46 0.00 0.00 4.49
2598 4343 3.432378 AGGGACCGGATATGAGATACAC 58.568 50.000 9.46 0.00 0.00 2.90
2599 4344 3.075432 TGAGGGACCGGATATGAGATACA 59.925 47.826 9.46 0.00 0.00 2.29
2600 4345 3.698289 TGAGGGACCGGATATGAGATAC 58.302 50.000 9.46 0.00 0.00 2.24
2601 4346 4.609866 ATGAGGGACCGGATATGAGATA 57.390 45.455 9.46 0.00 0.00 1.98
2602 4347 3.481559 ATGAGGGACCGGATATGAGAT 57.518 47.619 9.46 0.00 0.00 2.75
2603 4348 4.537751 GATATGAGGGACCGGATATGAGA 58.462 47.826 9.46 0.00 0.00 3.27
2604 4349 3.639094 GGATATGAGGGACCGGATATGAG 59.361 52.174 9.46 0.00 0.00 2.90
2605 4350 3.012388 TGGATATGAGGGACCGGATATGA 59.988 47.826 9.46 0.00 0.00 2.15
2606 4351 3.374764 TGGATATGAGGGACCGGATATG 58.625 50.000 9.46 0.00 0.00 1.78
2607 4352 3.776731 TGGATATGAGGGACCGGATAT 57.223 47.619 9.46 0.00 0.00 1.63
2608 4353 3.776731 ATGGATATGAGGGACCGGATA 57.223 47.619 9.46 0.00 0.00 2.59
2609 4354 2.649742 ATGGATATGAGGGACCGGAT 57.350 50.000 9.46 0.00 0.00 4.18
2610 4355 2.382305 AGTATGGATATGAGGGACCGGA 59.618 50.000 9.46 0.00 0.00 5.14
2611 4356 2.821437 AGTATGGATATGAGGGACCGG 58.179 52.381 0.00 0.00 0.00 5.28
2612 4357 4.770531 TGTTAGTATGGATATGAGGGACCG 59.229 45.833 0.00 0.00 0.00 4.79
2613 4358 6.681729 TTGTTAGTATGGATATGAGGGACC 57.318 41.667 0.00 0.00 0.00 4.46
2648 4393 6.338146 TCCATCGATGATCTACGTTCTTTTT 58.662 36.000 26.86 0.00 0.00 1.94
2649 4394 5.902681 TCCATCGATGATCTACGTTCTTTT 58.097 37.500 26.86 0.00 0.00 2.27
2650 4395 5.515797 TCCATCGATGATCTACGTTCTTT 57.484 39.130 26.86 0.00 0.00 2.52
2651 4396 5.713792 ATCCATCGATGATCTACGTTCTT 57.286 39.130 26.86 0.00 0.00 2.52
2681 4426 9.814899 TGTGAATTATGTGAACTTTGACAATTT 57.185 25.926 0.00 0.00 0.00 1.82
2682 4427 9.985730 ATGTGAATTATGTGAACTTTGACAATT 57.014 25.926 0.00 0.00 0.00 2.32
2722 4467 9.420551 CCGTCTTCAGTTCTAGTTTTTAGTAAT 57.579 33.333 0.00 0.00 0.00 1.89
2723 4468 8.632679 TCCGTCTTCAGTTCTAGTTTTTAGTAA 58.367 33.333 0.00 0.00 0.00 2.24
2724 4469 8.169977 TCCGTCTTCAGTTCTAGTTTTTAGTA 57.830 34.615 0.00 0.00 0.00 1.82
2725 4470 7.014038 TCTCCGTCTTCAGTTCTAGTTTTTAGT 59.986 37.037 0.00 0.00 0.00 2.24
2726 4471 7.326547 GTCTCCGTCTTCAGTTCTAGTTTTTAG 59.673 40.741 0.00 0.00 0.00 1.85
2727 4472 7.144000 GTCTCCGTCTTCAGTTCTAGTTTTTA 58.856 38.462 0.00 0.00 0.00 1.52
2728 4473 5.984323 GTCTCCGTCTTCAGTTCTAGTTTTT 59.016 40.000 0.00 0.00 0.00 1.94
2729 4474 5.530712 GTCTCCGTCTTCAGTTCTAGTTTT 58.469 41.667 0.00 0.00 0.00 2.43
2730 4475 4.320348 CGTCTCCGTCTTCAGTTCTAGTTT 60.320 45.833 0.00 0.00 0.00 2.66
2731 4476 3.188873 CGTCTCCGTCTTCAGTTCTAGTT 59.811 47.826 0.00 0.00 0.00 2.24
2732 4477 2.743126 CGTCTCCGTCTTCAGTTCTAGT 59.257 50.000 0.00 0.00 0.00 2.57
2733 4478 3.001414 TCGTCTCCGTCTTCAGTTCTAG 58.999 50.000 0.00 0.00 35.01 2.43
2734 4479 2.740981 GTCGTCTCCGTCTTCAGTTCTA 59.259 50.000 0.00 0.00 35.01 2.10
2735 4480 1.536331 GTCGTCTCCGTCTTCAGTTCT 59.464 52.381 0.00 0.00 35.01 3.01
2736 4481 1.725292 CGTCGTCTCCGTCTTCAGTTC 60.725 57.143 0.00 0.00 35.01 3.01
2737 4482 0.237761 CGTCGTCTCCGTCTTCAGTT 59.762 55.000 0.00 0.00 35.01 3.16
2738 4483 1.575576 CCGTCGTCTCCGTCTTCAGT 61.576 60.000 0.00 0.00 35.01 3.41
2739 4484 1.134901 CCGTCGTCTCCGTCTTCAG 59.865 63.158 0.00 0.00 35.01 3.02
2740 4485 1.296755 CTCCGTCGTCTCCGTCTTCA 61.297 60.000 0.00 0.00 35.01 3.02
2741 4486 1.018226 TCTCCGTCGTCTCCGTCTTC 61.018 60.000 0.00 0.00 35.01 2.87
2742 4487 0.392729 ATCTCCGTCGTCTCCGTCTT 60.393 55.000 0.00 0.00 35.01 3.01
2743 4488 0.392729 AATCTCCGTCGTCTCCGTCT 60.393 55.000 0.00 0.00 35.01 4.18
2744 4489 0.027848 GAATCTCCGTCGTCTCCGTC 59.972 60.000 0.00 0.00 35.01 4.79
2745 4490 0.675837 TGAATCTCCGTCGTCTCCGT 60.676 55.000 0.00 0.00 35.01 4.69
2746 4491 0.248134 GTGAATCTCCGTCGTCTCCG 60.248 60.000 0.00 0.00 0.00 4.63
2747 4492 0.100861 GGTGAATCTCCGTCGTCTCC 59.899 60.000 0.00 0.00 0.00 3.71
2748 4493 0.809385 TGGTGAATCTCCGTCGTCTC 59.191 55.000 0.00 0.00 0.00 3.36
2749 4494 0.526662 GTGGTGAATCTCCGTCGTCT 59.473 55.000 0.00 0.00 0.00 4.18
2750 4495 0.526662 AGTGGTGAATCTCCGTCGTC 59.473 55.000 0.00 0.00 0.00 4.20
2751 4496 0.966920 AAGTGGTGAATCTCCGTCGT 59.033 50.000 0.00 0.00 0.00 4.34
2752 4497 1.630148 GAAGTGGTGAATCTCCGTCG 58.370 55.000 0.00 0.00 0.00 5.12
2753 4498 1.550976 AGGAAGTGGTGAATCTCCGTC 59.449 52.381 0.00 0.00 0.00 4.79
2754 4499 1.550976 GAGGAAGTGGTGAATCTCCGT 59.449 52.381 0.00 0.00 0.00 4.69
2755 4500 1.469940 CGAGGAAGTGGTGAATCTCCG 60.470 57.143 0.00 0.00 0.00 4.63
2756 4501 1.740718 GCGAGGAAGTGGTGAATCTCC 60.741 57.143 0.00 0.00 0.00 3.71
2757 4502 1.646189 GCGAGGAAGTGGTGAATCTC 58.354 55.000 0.00 0.00 0.00 2.75
2758 4503 0.250513 GGCGAGGAAGTGGTGAATCT 59.749 55.000 0.00 0.00 0.00 2.40
2759 4504 1.084370 CGGCGAGGAAGTGGTGAATC 61.084 60.000 0.00 0.00 0.00 2.52
2760 4505 1.079127 CGGCGAGGAAGTGGTGAAT 60.079 57.895 0.00 0.00 0.00 2.57
2761 4506 2.342279 CGGCGAGGAAGTGGTGAA 59.658 61.111 0.00 0.00 0.00 3.18
2762 4507 3.691342 CCGGCGAGGAAGTGGTGA 61.691 66.667 9.30 0.00 45.00 4.02
2768 4513 4.410400 AAAGGGCCGGCGAGGAAG 62.410 66.667 22.54 0.00 45.00 3.46
2769 4514 4.715523 CAAAGGGCCGGCGAGGAA 62.716 66.667 22.54 0.00 45.00 3.36
2804 4549 3.488090 GCCGACGCCTACAGTTGC 61.488 66.667 0.00 0.00 0.00 4.17
2805 4550 3.179265 CGCCGACGCCTACAGTTG 61.179 66.667 0.00 0.00 0.00 3.16
2806 4551 4.430765 CCGCCGACGCCTACAGTT 62.431 66.667 0.00 0.00 38.22 3.16
2822 4567 4.778143 AACGATCCGCCACCAGCC 62.778 66.667 0.00 0.00 38.78 4.85
2823 4568 3.195698 GAACGATCCGCCACCAGC 61.196 66.667 0.00 0.00 38.52 4.85
2824 4569 2.885644 CGAACGATCCGCCACCAG 60.886 66.667 0.00 0.00 0.00 4.00
2825 4570 3.350909 CTCGAACGATCCGCCACCA 62.351 63.158 0.00 0.00 0.00 4.17
2826 4571 2.582498 CTCGAACGATCCGCCACC 60.582 66.667 0.00 0.00 0.00 4.61
2827 4572 1.872679 GACTCGAACGATCCGCCAC 60.873 63.158 0.00 0.00 0.00 5.01
2828 4573 2.488355 GACTCGAACGATCCGCCA 59.512 61.111 0.00 0.00 0.00 5.69
2829 4574 2.651232 CGACTCGAACGATCCGCC 60.651 66.667 5.89 0.00 0.00 6.13
2830 4575 1.933519 GACGACTCGAACGATCCGC 60.934 63.158 16.43 7.28 34.70 5.54
2831 4576 1.647577 CGACGACTCGAACGATCCG 60.648 63.158 16.43 13.41 43.06 4.18
2832 4577 1.297451 CCGACGACTCGAACGATCC 60.297 63.158 16.43 6.21 43.06 3.36
2833 4578 0.315220 CTCCGACGACTCGAACGATC 60.315 60.000 16.43 9.96 43.06 3.69
2834 4579 1.703438 CCTCCGACGACTCGAACGAT 61.703 60.000 16.43 3.43 43.06 3.73
2835 4580 2.385875 CCTCCGACGACTCGAACGA 61.386 63.158 16.43 0.00 43.06 3.85
2836 4581 2.097918 CCTCCGACGACTCGAACG 59.902 66.667 5.20 10.11 43.06 3.95
2837 4582 1.424635 CTCCTCCGACGACTCGAAC 59.575 63.158 5.20 0.00 43.06 3.95
2838 4583 2.396955 GCTCCTCCGACGACTCGAA 61.397 63.158 5.20 0.00 43.06 3.71
2839 4584 2.818714 GCTCCTCCGACGACTCGA 60.819 66.667 5.20 0.00 43.06 4.04
2840 4585 2.820479 AGCTCCTCCGACGACTCG 60.820 66.667 0.00 0.00 39.83 4.18
2841 4586 1.984321 GACAGCTCCTCCGACGACTC 61.984 65.000 0.00 0.00 0.00 3.36
2842 4587 2.034376 ACAGCTCCTCCGACGACT 59.966 61.111 0.00 0.00 0.00 4.18
2843 4588 2.486042 GACAGCTCCTCCGACGAC 59.514 66.667 0.00 0.00 0.00 4.34
2844 4589 2.750637 GGACAGCTCCTCCGACGA 60.751 66.667 0.00 0.00 33.07 4.20
2849 4594 2.766400 CGTCTCGGACAGCTCCTCC 61.766 68.421 5.15 0.00 33.79 4.30
2850 4595 1.984321 GACGTCTCGGACAGCTCCTC 61.984 65.000 8.70 0.00 33.79 3.71
2851 4596 2.034376 ACGTCTCGGACAGCTCCT 59.966 61.111 5.15 0.00 33.79 3.69
2852 4597 2.486042 GACGTCTCGGACAGCTCC 59.514 66.667 8.70 0.00 32.09 4.70
2853 4598 2.098680 CGACGTCTCGGACAGCTC 59.901 66.667 14.70 0.00 36.16 4.09
2854 4599 2.668889 ACGACGTCTCGGACAGCT 60.669 61.111 14.70 0.00 44.80 4.24
2855 4600 2.202324 GACGACGTCTCGGACAGC 60.202 66.667 20.52 0.00 44.80 4.40
2856 4601 2.096030 CGACGACGTCTCGGACAG 59.904 66.667 24.36 4.53 44.80 3.51
2866 4611 2.860421 CTTCGACTCCGACGACGACG 62.860 65.000 12.66 12.66 45.50 5.12
2867 4612 1.225691 CTTCGACTCCGACGACGAC 60.226 63.158 9.28 0.00 45.50 4.34
2868 4613 1.349982 CTCTTCGACTCCGACGACGA 61.350 60.000 9.28 0.00 45.50 4.20
2869 4614 1.059058 CTCTTCGACTCCGACGACG 59.941 63.158 0.00 0.00 45.50 5.12
2870 4615 1.424635 CCTCTTCGACTCCGACGAC 59.575 63.158 0.00 0.00 45.50 4.34
2871 4616 3.886340 CCTCTTCGACTCCGACGA 58.114 61.111 0.00 0.00 45.50 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.