Multiple sequence alignment - TraesCS2A01G285500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G285500 chr2A 100.000 5708 0 0 1 5708 482699118 482693411 0.000000e+00 10541.0
1 TraesCS2A01G285500 chr2D 95.354 2303 57 17 146 2426 359658629 359660903 0.000000e+00 3615.0
2 TraesCS2A01G285500 chr2D 96.511 1949 35 8 2589 4519 359660887 359662820 0.000000e+00 3192.0
3 TraesCS2A01G285500 chr2D 97.081 788 12 6 4610 5388 359663286 359664071 0.000000e+00 1317.0
4 TraesCS2A01G285500 chr2D 90.345 145 13 1 1 144 359635206 359635350 7.550000e-44 189.0
5 TraesCS2A01G285500 chr2B 94.365 1881 62 11 2589 4445 426481178 426479318 0.000000e+00 2846.0
6 TraesCS2A01G285500 chr2B 94.550 1633 76 9 8 1633 426482902 426481276 0.000000e+00 2510.0
7 TraesCS2A01G285500 chr2B 93.584 826 25 8 4610 5429 426478725 426477922 0.000000e+00 1206.0
8 TraesCS2A01G285500 chr2B 93.694 111 7 0 4432 4542 426479100 426479210 3.540000e-37 167.0
9 TraesCS2A01G285500 chr2B 89.922 129 9 4 4424 4548 90305702 90305574 4.580000e-36 163.0
10 TraesCS2A01G285500 chr2B 96.842 95 3 0 2332 2426 426481256 426481162 5.920000e-35 159.0
11 TraesCS2A01G285500 chr2B 85.366 82 10 2 2251 2331 131132753 131132833 3.660000e-12 84.2
12 TraesCS2A01G285500 chr2B 96.078 51 1 1 4544 4594 426479257 426479208 1.320000e-11 82.4
13 TraesCS2A01G285500 chr3A 86.727 663 60 16 1676 2331 674252339 674251698 0.000000e+00 712.0
14 TraesCS2A01G285500 chr5D 83.877 521 65 11 1655 2161 547709884 547710399 4.000000e-131 479.0
15 TraesCS2A01G285500 chr5D 85.366 123 18 0 2139 2261 547710409 547710531 1.670000e-25 128.0
16 TraesCS2A01G285500 chr4A 96.484 256 9 0 5433 5688 5523645 5523390 1.900000e-114 424.0
17 TraesCS2A01G285500 chr4A 95.312 256 11 1 5433 5688 743160835 743161089 6.890000e-109 405.0
18 TraesCS2A01G285500 chr4A 98.305 177 1 2 2425 2599 636965456 636965280 5.550000e-80 309.0
19 TraesCS2A01G285500 chr3B 96.094 256 10 0 5433 5688 665471165 665471420 8.850000e-113 418.0
20 TraesCS2A01G285500 chr3B 98.864 176 0 2 2416 2590 520146243 520146417 4.290000e-81 313.0
21 TraesCS2A01G285500 chr3B 97.268 183 3 2 2425 2607 810951125 810950945 5.550000e-80 309.0
22 TraesCS2A01G285500 chr4B 94.922 256 13 0 5433 5688 639000953 639001208 8.910000e-108 401.0
23 TraesCS2A01G285500 chr4B 98.857 175 1 1 2422 2596 461272295 461272468 1.540000e-80 311.0
24 TraesCS2A01G285500 chr5B 96.172 209 8 0 5433 5641 610108827 610108619 5.480000e-90 342.0
25 TraesCS2A01G285500 chr5B 98.864 176 2 0 2416 2591 633962717 633962542 1.190000e-81 315.0
26 TraesCS2A01G285500 chr5B 95.625 160 7 0 3211 3370 574956449 574956608 2.040000e-64 257.0
27 TraesCS2A01G285500 chr5B 93.878 49 3 0 4540 4588 59714119 59714167 2.210000e-09 75.0
28 TraesCS2A01G285500 chr6A 90.837 251 22 1 5438 5688 542236386 542236137 9.160000e-88 335.0
29 TraesCS2A01G285500 chr6A 95.652 161 6 1 3211 3370 457379371 457379531 2.040000e-64 257.0
30 TraesCS2A01G285500 chr1B 98.870 177 1 1 2415 2591 321238415 321238240 1.190000e-81 315.0
31 TraesCS2A01G285500 chr7A 97.802 182 2 2 2425 2604 76123033 76122852 4.290000e-81 313.0
32 TraesCS2A01G285500 chr7A 95.625 160 7 0 3211 3370 83784838 83784997 2.040000e-64 257.0
33 TraesCS2A01G285500 chr7A 94.512 164 8 1 3208 3370 538361885 538361722 9.490000e-63 252.0
34 TraesCS2A01G285500 chr7A 96.000 50 2 0 4544 4593 296464481 296464432 1.320000e-11 82.4
35 TraesCS2A01G285500 chr5A 94.581 203 6 5 2393 2591 680850613 680850814 5.550000e-80 309.0
36 TraesCS2A01G285500 chr5A 93.519 108 7 0 4435 4542 145665931 145666038 1.650000e-35 161.0
37 TraesCS2A01G285500 chr5A 83.333 162 19 5 4433 4586 491947496 491947657 5.960000e-30 143.0
38 TraesCS2A01G285500 chr1A 98.305 177 2 1 2425 2601 50339487 50339312 5.550000e-80 309.0
39 TraesCS2A01G285500 chr6B 81.074 391 56 12 1679 2055 624014717 624014331 4.320000e-76 296.0
40 TraesCS2A01G285500 chr6B 89.933 149 15 0 2111 2259 624014162 624014014 5.840000e-45 193.0
41 TraesCS2A01G285500 chr6B 95.146 103 5 0 4434 4536 610814549 610814651 4.580000e-36 163.0
42 TraesCS2A01G285500 chr6B 100.000 45 0 0 4544 4588 610814650 610814606 3.660000e-12 84.2
43 TraesCS2A01G285500 chr3D 95.625 160 7 0 3211 3370 422517790 422517631 2.040000e-64 257.0
44 TraesCS2A01G285500 chr4D 95.000 160 8 0 3211 3370 65536288 65536129 9.490000e-63 252.0
45 TraesCS2A01G285500 chr4D 95.000 160 8 0 3211 3370 482703621 482703462 9.490000e-63 252.0
46 TraesCS2A01G285500 chr7B 93.913 115 6 1 4435 4549 140933790 140933903 7.600000e-39 172.0
47 TraesCS2A01G285500 chr7B 100.000 77 0 0 4435 4511 140933982 140933906 5.960000e-30 143.0
48 TraesCS2A01G285500 chr7D 96.970 99 3 0 4434 4532 175648248 175648346 3.540000e-37 167.0
49 TraesCS2A01G285500 chr7D 97.403 77 2 0 4435 4511 175648441 175648365 1.290000e-26 132.0
50 TraesCS2A01G285500 chr7D 77.976 168 24 5 4434 4588 125896651 125896818 6.090000e-15 93.5
51 TraesCS2A01G285500 chr7D 95.556 45 1 1 4544 4588 249042419 249042462 2.850000e-08 71.3
52 TraesCS2A01G285500 chrUn 89.922 129 9 4 4424 4548 25042770 25042642 4.580000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G285500 chr2A 482693411 482699118 5707 True 10541.00 10541 100.000000 1 5708 1 chr2A.!!$R1 5707
1 TraesCS2A01G285500 chr2D 359658629 359664071 5442 False 2708.00 3615 96.315333 146 5388 3 chr2D.!!$F2 5242
2 TraesCS2A01G285500 chr2B 426477922 426482902 4980 True 1360.68 2846 95.083800 8 5429 5 chr2B.!!$R2 5421
3 TraesCS2A01G285500 chr3A 674251698 674252339 641 True 712.00 712 86.727000 1676 2331 1 chr3A.!!$R1 655
4 TraesCS2A01G285500 chr5D 547709884 547710531 647 False 303.50 479 84.621500 1655 2261 2 chr5D.!!$F1 606
5 TraesCS2A01G285500 chr6B 624014014 624014717 703 True 244.50 296 85.503500 1679 2259 2 chr6B.!!$R2 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
104 106 1.067250 GATCTGCGAGGACTCTGCC 59.933 63.158 11.53 0.0 0.00 4.85 F
187 189 1.616159 GCCCTGGCTTGTAGAAAACA 58.384 50.000 0.00 0.0 38.26 2.83 F
519 521 3.216292 GTGGGTGTGTGGTGGTGC 61.216 66.667 0.00 0.0 0.00 5.01 F
2318 2517 1.464722 CCCCTTTGGCCTCCAAGAA 59.535 57.895 3.32 0.0 44.84 2.52 F
2442 2641 0.037303 CAAGGACAGACCCAGTGCAT 59.963 55.000 0.00 0.0 40.05 3.96 F
2524 2723 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.0 40.08 4.58 F
4208 4445 0.108472 CTCTGCGCTTCTGTCCATGA 60.108 55.000 9.73 0.0 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1006 1027 1.997874 CCTTGGTCTCCTCCCCCTG 60.998 68.421 0.00 0.00 0.00 4.45 R
1652 1675 2.407340 TTTGGCCCCCTGTTAATTGT 57.593 45.000 0.00 0.00 0.00 2.71 R
2423 2622 0.037303 ATGCACTGGGTCTGTCCTTG 59.963 55.000 0.00 0.00 36.25 3.61 R
3315 3517 0.389948 CGGGTTCGAGTCCTGGAAAG 60.390 60.000 0.00 0.00 39.00 2.62 R
4366 4603 1.698165 ACGTGCTGTAACGAGACATG 58.302 50.000 11.09 0.00 46.49 3.21 R
4378 4615 5.291858 TGAAGAAGCAGAATATTACGTGCTG 59.708 40.000 16.28 8.05 45.51 4.41 R
5588 6304 0.106967 TGCACTTGTGTGGTAGCCAA 60.107 50.000 2.61 0.00 43.97 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.127810 CTTGTTGATTTCGACATGGATCAT 57.872 37.500 0.00 0.00 39.77 2.45
36 37 6.146021 TGTTGATTTCGACATGGATCATATCG 59.854 38.462 0.00 2.59 41.39 2.92
48 49 1.126948 TCATATCGGGCAGCCCATGA 61.127 55.000 30.86 26.26 45.83 3.07
78 79 9.981460 ATAATGAGAAGGTTCCATAAGACTTTT 57.019 29.630 0.00 0.00 0.00 2.27
92 93 8.288208 CCATAAGACTTTTCATACATGATCTGC 58.712 37.037 0.00 0.00 36.56 4.26
104 106 1.067250 GATCTGCGAGGACTCTGCC 59.933 63.158 11.53 0.00 0.00 4.85
125 127 3.181489 CCTCCTTGTACGTAGCCAACTAG 60.181 52.174 0.00 0.00 0.00 2.57
126 128 2.756760 TCCTTGTACGTAGCCAACTAGG 59.243 50.000 8.94 8.94 39.62 3.02
140 142 5.092259 GCCAACTAGGACCTAATACCCTAT 58.908 45.833 2.08 0.00 41.22 2.57
187 189 1.616159 GCCCTGGCTTGTAGAAAACA 58.384 50.000 0.00 0.00 38.26 2.83
220 222 9.710818 ATCACTTGGTAGATACTTAGGACTTTA 57.289 33.333 0.00 0.00 0.00 1.85
250 252 7.023197 ACTCCAATGTAGTAAACACAAACAC 57.977 36.000 0.00 0.00 42.09 3.32
350 352 7.025620 ACATCTAGATTATGACCCCCTACATT 58.974 38.462 1.33 0.00 0.00 2.71
406 408 5.359756 TCTTCTGTCATGTGTATGCATACC 58.640 41.667 29.36 21.46 34.21 2.73
519 521 3.216292 GTGGGTGTGTGGTGGTGC 61.216 66.667 0.00 0.00 0.00 5.01
618 620 5.005094 CCCTCCGTCCTAAAATGTAAAACA 58.995 41.667 0.00 0.00 0.00 2.83
678 680 9.139174 CTCTTTAGCAAAACTGAAAAAGAAACA 57.861 29.630 0.00 0.00 33.82 2.83
746 750 7.094334 GGAGAAAAAGACCAAGTCCGAAATAAT 60.094 37.037 0.00 0.00 32.18 1.28
749 753 6.743575 AAAGACCAAGTCCGAAATAATCAG 57.256 37.500 0.00 0.00 32.18 2.90
1608 1631 4.069232 CGAACAGCGGAGGAGCCA 62.069 66.667 0.00 0.00 38.01 4.75
1652 1675 2.108157 GTGGTGGAGCGTGACACA 59.892 61.111 6.37 0.00 39.31 3.72
1661 1684 2.546368 GGAGCGTGACACACAATTAACA 59.454 45.455 6.37 0.00 33.40 2.41
1836 1859 1.734707 GCAGCACAAGATGTTCCATGC 60.735 52.381 0.00 0.00 32.61 4.06
1854 1877 2.750637 GCAGATGCAGCAGCTGGT 60.751 61.111 35.44 13.85 46.38 4.00
1975 2009 4.697352 AGAGATGAGGTGAAATCAAAACGG 59.303 41.667 0.00 0.00 0.00 4.44
2029 2067 6.657966 TGAGAGACAAAGTAAGACTTCCGATA 59.342 38.462 0.00 0.00 37.47 2.92
2058 2096 8.539770 TTTTTATTTTCACTGTTGCAAGTTGA 57.460 26.923 7.16 0.00 0.00 3.18
2072 2110 3.500299 GCAAGTTGAGGAGAGTTTCTTCC 59.500 47.826 7.16 0.00 31.17 3.46
2244 2435 8.834465 AGTCAATATACTTCACTGATGAAATGC 58.166 33.333 0.00 0.00 44.28 3.56
2318 2517 1.464722 CCCCTTTGGCCTCCAAGAA 59.535 57.895 3.32 0.00 44.84 2.52
2392 2591 2.983907 TAAGTGGGACGTTGACAACA 57.016 45.000 18.09 0.00 0.00 3.33
2413 2612 5.273674 CACATGATGTGTAGGATGTCTCT 57.726 43.478 17.08 0.00 43.08 3.10
2414 2613 5.048507 CACATGATGTGTAGGATGTCTCTG 58.951 45.833 17.08 0.00 43.08 3.35
2415 2614 4.958581 ACATGATGTGTAGGATGTCTCTGA 59.041 41.667 0.00 0.00 39.91 3.27
2416 2615 5.601729 ACATGATGTGTAGGATGTCTCTGAT 59.398 40.000 0.00 0.00 39.91 2.90
2417 2616 6.099413 ACATGATGTGTAGGATGTCTCTGATT 59.901 38.462 0.00 0.00 39.91 2.57
2418 2617 6.550938 TGATGTGTAGGATGTCTCTGATTT 57.449 37.500 0.00 0.00 0.00 2.17
2419 2618 6.577103 TGATGTGTAGGATGTCTCTGATTTC 58.423 40.000 0.00 0.00 0.00 2.17
2420 2619 5.344743 TGTGTAGGATGTCTCTGATTTCC 57.655 43.478 0.00 0.00 0.00 3.13
2421 2620 4.777366 TGTGTAGGATGTCTCTGATTTCCA 59.223 41.667 0.00 0.00 0.00 3.53
2422 2621 5.248248 TGTGTAGGATGTCTCTGATTTCCAA 59.752 40.000 0.00 0.00 0.00 3.53
2423 2622 5.582665 GTGTAGGATGTCTCTGATTTCCAAC 59.417 44.000 0.00 0.00 0.00 3.77
2424 2623 4.916041 AGGATGTCTCTGATTTCCAACA 57.084 40.909 0.00 0.00 0.00 3.33
2425 2624 5.246981 AGGATGTCTCTGATTTCCAACAA 57.753 39.130 0.00 0.00 0.00 2.83
2426 2625 5.251764 AGGATGTCTCTGATTTCCAACAAG 58.748 41.667 0.00 0.00 0.00 3.16
2427 2626 4.397417 GGATGTCTCTGATTTCCAACAAGG 59.603 45.833 0.00 0.00 39.47 3.61
2436 2635 2.938301 TCCAACAAGGACAGACCCA 58.062 52.632 0.00 0.00 43.07 4.51
2437 2636 0.764890 TCCAACAAGGACAGACCCAG 59.235 55.000 0.00 0.00 43.07 4.45
2438 2637 0.474184 CCAACAAGGACAGACCCAGT 59.526 55.000 0.00 0.00 41.22 4.00
2439 2638 1.597742 CAACAAGGACAGACCCAGTG 58.402 55.000 0.00 0.00 40.05 3.66
2440 2639 0.179018 AACAAGGACAGACCCAGTGC 60.179 55.000 0.00 0.00 40.05 4.40
2441 2640 1.344953 ACAAGGACAGACCCAGTGCA 61.345 55.000 0.00 0.00 40.05 4.57
2442 2641 0.037303 CAAGGACAGACCCAGTGCAT 59.963 55.000 0.00 0.00 40.05 3.96
2443 2642 1.278985 CAAGGACAGACCCAGTGCATA 59.721 52.381 0.00 0.00 40.05 3.14
2444 2643 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2445 2644 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2446 2645 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2447 2646 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2448 2647 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2449 2648 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2450 2649 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2451 2650 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2452 2651 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2453 2652 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2454 2653 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2455 2654 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2456 2655 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2457 2656 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2458 2657 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2459 2658 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2460 2659 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2461 2660 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2469 2668 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2470 2669 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2471 2670 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2472 2671 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2473 2672 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2474 2673 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2475 2674 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2477 2676 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2478 2677 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2479 2678 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2480 2679 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2481 2680 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2482 2681 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2483 2682 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2484 2683 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2485 2684 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2486 2685 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2487 2686 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2488 2687 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2489 2688 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2490 2689 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2491 2690 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2492 2691 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2493 2692 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2494 2693 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2495 2694 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2496 2695 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2497 2696 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2498 2697 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2499 2698 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2500 2699 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2501 2700 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2502 2701 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2503 2702 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2504 2703 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2505 2704 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2506 2705 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2507 2706 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2508 2707 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2509 2708 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2510 2709 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2521 2720 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2522 2721 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2523 2722 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2524 2723 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2526 2725 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2527 2726 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2528 2727 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2529 2728 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2530 2729 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2531 2730 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2532 2731 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2533 2732 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2542 2741 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
2543 2742 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
2544 2743 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
2545 2744 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
2546 2745 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
2547 2746 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
2548 2747 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
2549 2748 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
2550 2749 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
2551 2750 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
2562 2761 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
2563 2762 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
2564 2763 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
2565 2764 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
2566 2765 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
2567 2766 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
2568 2767 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
2574 2773 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
2575 2774 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
2576 2775 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
2577 2776 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
2578 2777 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
2579 2778 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
2580 2779 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
2622 2821 3.836949 ACAAATGCGCAACTATTTCCAG 58.163 40.909 17.11 1.24 0.00 3.86
2933 3133 5.585820 TTTTGTTGGTAGGGAGTGAAAAC 57.414 39.130 0.00 0.00 0.00 2.43
3427 3657 5.876357 TGGCTTCCCTATTACCAATACATC 58.124 41.667 0.00 0.00 0.00 3.06
3656 3886 5.986741 TGTACTTTCGTACTGCATTTCTGAA 59.013 36.000 0.00 0.00 44.97 3.02
3965 4195 3.726557 ATGACTTGCTGAATCTTCCCA 57.273 42.857 0.00 0.00 0.00 4.37
4003 4237 7.820648 AGACTGATTAACATTGTTTCACCATC 58.179 34.615 7.45 3.22 0.00 3.51
4030 4265 6.815089 AGTTGTGTCTTAAAATTGCAATGGA 58.185 32.000 13.82 4.20 0.00 3.41
4208 4445 0.108472 CTCTGCGCTTCTGTCCATGA 60.108 55.000 9.73 0.00 0.00 3.07
4262 4499 7.224167 GTCCCGTAATTCGTAGATGAAATTCTT 59.776 37.037 0.00 0.00 35.04 2.52
4272 4509 5.886960 AGATGAAATTCTTGTCTTTCCCG 57.113 39.130 0.00 0.00 31.74 5.14
4328 4565 5.632034 ATCCCCTCTAATAACCACTTGAC 57.368 43.478 0.00 0.00 0.00 3.18
4366 4603 7.698836 ATTAGCGGAAATTACATTGAAATGC 57.301 32.000 2.92 0.00 40.04 3.56
4378 4615 5.631026 ACATTGAAATGCATGTCTCGTTAC 58.369 37.500 17.76 0.00 40.04 2.50
4587 4826 3.854809 CGCCCACGTTGGTTAAATTTATG 59.145 43.478 7.60 0.00 35.17 1.90
4589 4828 5.231702 GCCCACGTTGGTTAAATTTATGTT 58.768 37.500 7.60 0.00 35.17 2.71
4590 4829 5.119434 GCCCACGTTGGTTAAATTTATGTTG 59.881 40.000 7.60 0.00 35.17 3.33
4592 4831 6.924060 CCCACGTTGGTTAAATTTATGTTGAA 59.076 34.615 0.00 0.00 35.17 2.69
4593 4832 7.600752 CCCACGTTGGTTAAATTTATGTTGAAT 59.399 33.333 0.00 0.00 35.17 2.57
4594 4833 8.983724 CCACGTTGGTTAAATTTATGTTGAATT 58.016 29.630 0.00 0.00 31.35 2.17
4720 5425 9.245962 GTACCATACTATGAATGTCAAGTGTAC 57.754 37.037 0.00 0.00 0.00 2.90
4721 5426 8.079211 ACCATACTATGAATGTCAAGTGTACT 57.921 34.615 0.00 0.00 0.00 2.73
4795 5502 1.021390 CATCCAGCACCCAAGACGTC 61.021 60.000 7.70 7.70 0.00 4.34
4973 5686 1.380302 CTGTTGTGGAGGGGAAGGG 59.620 63.158 0.00 0.00 0.00 3.95
5180 5896 0.465460 TGGGTGAGTCACAACTTGGC 60.465 55.000 24.20 5.33 35.28 4.52
5218 5934 6.017400 TGAGCAAAAATCATCTGAAGTTCC 57.983 37.500 0.00 0.00 0.00 3.62
5262 5978 7.095481 GGGATTTCAAGTTGAAGAAAAATGCTC 60.095 37.037 17.36 5.36 37.70 4.26
5312 6028 3.998913 TGGGTCTGAATCATAGCAACA 57.001 42.857 0.54 0.00 0.00 3.33
5323 6039 2.006888 CATAGCAACAGTGGGGTTACG 58.993 52.381 0.00 0.00 0.00 3.18
5362 6078 2.203266 GCTATGCACTGGGGCCTC 60.203 66.667 0.84 0.00 0.00 4.70
5363 6079 2.750657 GCTATGCACTGGGGCCTCT 61.751 63.158 3.07 0.00 0.00 3.69
5395 6111 4.380550 CGTGACAGGAAGTACTGCAGATTA 60.381 45.833 23.35 0.00 42.21 1.75
5396 6112 5.479306 GTGACAGGAAGTACTGCAGATTAA 58.521 41.667 23.35 0.00 42.21 1.40
5399 6115 5.865085 ACAGGAAGTACTGCAGATTAAACA 58.135 37.500 23.35 0.00 42.21 2.83
5404 6120 6.092807 GGAAGTACTGCAGATTAAACAAGAGG 59.907 42.308 23.35 0.00 0.00 3.69
5405 6121 5.491982 AGTACTGCAGATTAAACAAGAGGG 58.508 41.667 23.35 0.00 0.00 4.30
5406 6122 3.690460 ACTGCAGATTAAACAAGAGGGG 58.310 45.455 23.35 0.00 0.00 4.79
5407 6123 3.074538 ACTGCAGATTAAACAAGAGGGGT 59.925 43.478 23.35 0.00 0.00 4.95
5408 6124 4.082125 CTGCAGATTAAACAAGAGGGGTT 58.918 43.478 8.42 0.00 0.00 4.11
5411 6127 3.193479 CAGATTAAACAAGAGGGGTTGGC 59.807 47.826 0.00 0.00 0.00 4.52
5433 6149 4.101448 GACATGCCCACGGGAGCT 62.101 66.667 6.21 0.00 37.50 4.09
5434 6150 4.415150 ACATGCCCACGGGAGCTG 62.415 66.667 6.21 1.93 37.50 4.24
5439 6155 4.351054 CCCACGGGAGCTGGCTTT 62.351 66.667 0.00 0.00 37.50 3.51
5440 6156 2.747855 CCACGGGAGCTGGCTTTC 60.748 66.667 0.00 0.00 0.00 2.62
5441 6157 2.747855 CACGGGAGCTGGCTTTCC 60.748 66.667 0.00 1.66 0.00 3.13
5442 6158 3.249189 ACGGGAGCTGGCTTTCCA 61.249 61.111 0.00 0.00 40.85 3.53
5443 6159 2.273449 CGGGAGCTGGCTTTCCAT 59.727 61.111 0.00 0.00 42.51 3.41
5444 6160 1.271840 ACGGGAGCTGGCTTTCCATA 61.272 55.000 0.00 0.00 42.51 2.74
5445 6161 0.107214 CGGGAGCTGGCTTTCCATAA 60.107 55.000 0.00 0.00 42.51 1.90
5446 6162 1.681780 CGGGAGCTGGCTTTCCATAAA 60.682 52.381 0.00 0.00 42.51 1.40
5447 6163 2.456577 GGGAGCTGGCTTTCCATAAAA 58.543 47.619 0.00 0.00 42.51 1.52
5448 6164 2.831526 GGGAGCTGGCTTTCCATAAAAA 59.168 45.455 0.00 0.00 42.51 1.94
5449 6165 3.368427 GGGAGCTGGCTTTCCATAAAAAC 60.368 47.826 0.00 0.00 42.51 2.43
5450 6166 3.368427 GGAGCTGGCTTTCCATAAAAACC 60.368 47.826 0.00 0.00 42.51 3.27
5451 6167 3.238597 AGCTGGCTTTCCATAAAAACCA 58.761 40.909 0.00 0.00 42.51 3.67
5457 6173 6.930731 TGGCTTTCCATAAAAACCAGAATAC 58.069 36.000 0.00 0.00 38.02 1.89
5458 6174 6.071051 TGGCTTTCCATAAAAACCAGAATACC 60.071 38.462 0.00 0.00 38.02 2.73
5459 6175 6.033966 GCTTTCCATAAAAACCAGAATACCG 58.966 40.000 0.00 0.00 0.00 4.02
5460 6176 5.570234 TTCCATAAAAACCAGAATACCGC 57.430 39.130 0.00 0.00 0.00 5.68
5461 6177 3.949113 TCCATAAAAACCAGAATACCGCC 59.051 43.478 0.00 0.00 0.00 6.13
5462 6178 3.242936 CCATAAAAACCAGAATACCGCCG 60.243 47.826 0.00 0.00 0.00 6.46
5463 6179 0.524414 AAAAACCAGAATACCGCCGC 59.476 50.000 0.00 0.00 0.00 6.53
5464 6180 0.322187 AAAACCAGAATACCGCCGCT 60.322 50.000 0.00 0.00 0.00 5.52
5465 6181 0.538118 AAACCAGAATACCGCCGCTA 59.462 50.000 0.00 0.00 0.00 4.26
5466 6182 0.179092 AACCAGAATACCGCCGCTAC 60.179 55.000 0.00 0.00 0.00 3.58
5467 6183 1.324740 ACCAGAATACCGCCGCTACA 61.325 55.000 0.00 0.00 0.00 2.74
5468 6184 0.874607 CCAGAATACCGCCGCTACAC 60.875 60.000 0.00 0.00 0.00 2.90
5469 6185 0.874607 CAGAATACCGCCGCTACACC 60.875 60.000 0.00 0.00 0.00 4.16
5470 6186 1.593479 GAATACCGCCGCTACACCC 60.593 63.158 0.00 0.00 0.00 4.61
5471 6187 2.300850 GAATACCGCCGCTACACCCA 62.301 60.000 0.00 0.00 0.00 4.51
5472 6188 2.582734 AATACCGCCGCTACACCCAC 62.583 60.000 0.00 0.00 0.00 4.61
5476 6192 4.394712 GCCGCTACACCCACTGCT 62.395 66.667 0.00 0.00 0.00 4.24
5477 6193 3.014085 GCCGCTACACCCACTGCTA 62.014 63.158 0.00 0.00 0.00 3.49
5478 6194 1.153628 CCGCTACACCCACTGCTAC 60.154 63.158 0.00 0.00 0.00 3.58
5479 6195 1.605058 CCGCTACACCCACTGCTACT 61.605 60.000 0.00 0.00 0.00 2.57
5480 6196 0.458543 CGCTACACCCACTGCTACTG 60.459 60.000 0.00 0.00 0.00 2.74
5481 6197 0.608640 GCTACACCCACTGCTACTGT 59.391 55.000 0.00 0.00 0.00 3.55
5482 6198 1.002087 GCTACACCCACTGCTACTGTT 59.998 52.381 0.00 0.00 0.00 3.16
5483 6199 2.550208 GCTACACCCACTGCTACTGTTT 60.550 50.000 0.00 0.00 0.00 2.83
5484 6200 1.967319 ACACCCACTGCTACTGTTTG 58.033 50.000 0.00 0.00 0.00 2.93
5485 6201 1.211949 ACACCCACTGCTACTGTTTGT 59.788 47.619 0.00 0.00 0.00 2.83
5486 6202 1.873591 CACCCACTGCTACTGTTTGTC 59.126 52.381 0.00 0.00 0.00 3.18
5487 6203 1.768870 ACCCACTGCTACTGTTTGTCT 59.231 47.619 0.00 0.00 0.00 3.41
5488 6204 2.224305 ACCCACTGCTACTGTTTGTCTC 60.224 50.000 0.00 0.00 0.00 3.36
5489 6205 2.224281 CCCACTGCTACTGTTTGTCTCA 60.224 50.000 0.00 0.00 0.00 3.27
5490 6206 3.557898 CCCACTGCTACTGTTTGTCTCAT 60.558 47.826 0.00 0.00 0.00 2.90
5491 6207 3.681897 CCACTGCTACTGTTTGTCTCATC 59.318 47.826 0.00 0.00 0.00 2.92
5492 6208 4.562347 CCACTGCTACTGTTTGTCTCATCT 60.562 45.833 0.00 0.00 0.00 2.90
5493 6209 4.993584 CACTGCTACTGTTTGTCTCATCTT 59.006 41.667 0.00 0.00 0.00 2.40
5494 6210 5.119898 CACTGCTACTGTTTGTCTCATCTTC 59.880 44.000 0.00 0.00 0.00 2.87
5495 6211 5.011533 ACTGCTACTGTTTGTCTCATCTTCT 59.988 40.000 0.00 0.00 0.00 2.85
5496 6212 5.858381 TGCTACTGTTTGTCTCATCTTCTT 58.142 37.500 0.00 0.00 0.00 2.52
5497 6213 6.993079 TGCTACTGTTTGTCTCATCTTCTTA 58.007 36.000 0.00 0.00 0.00 2.10
5498 6214 7.093354 TGCTACTGTTTGTCTCATCTTCTTAG 58.907 38.462 0.00 0.00 0.00 2.18
5499 6215 6.533367 GCTACTGTTTGTCTCATCTTCTTAGG 59.467 42.308 0.00 0.00 0.00 2.69
5500 6216 6.672266 ACTGTTTGTCTCATCTTCTTAGGA 57.328 37.500 0.00 0.00 0.00 2.94
5501 6217 7.067496 ACTGTTTGTCTCATCTTCTTAGGAA 57.933 36.000 0.00 0.00 0.00 3.36
5502 6218 7.509546 ACTGTTTGTCTCATCTTCTTAGGAAA 58.490 34.615 0.00 0.00 0.00 3.13
5503 6219 7.442666 ACTGTTTGTCTCATCTTCTTAGGAAAC 59.557 37.037 0.00 0.00 0.00 2.78
5504 6220 7.279615 TGTTTGTCTCATCTTCTTAGGAAACA 58.720 34.615 0.00 0.00 0.00 2.83
5505 6221 7.939039 TGTTTGTCTCATCTTCTTAGGAAACAT 59.061 33.333 0.00 0.00 0.00 2.71
5506 6222 8.447053 GTTTGTCTCATCTTCTTAGGAAACATC 58.553 37.037 0.00 0.00 0.00 3.06
5507 6223 7.487822 TGTCTCATCTTCTTAGGAAACATCT 57.512 36.000 0.00 0.00 0.00 2.90
5508 6224 7.551585 TGTCTCATCTTCTTAGGAAACATCTC 58.448 38.462 0.00 0.00 0.00 2.75
5509 6225 7.398618 TGTCTCATCTTCTTAGGAAACATCTCT 59.601 37.037 0.00 0.00 0.00 3.10
5510 6226 8.908903 GTCTCATCTTCTTAGGAAACATCTCTA 58.091 37.037 0.00 0.00 0.00 2.43
5511 6227 9.653516 TCTCATCTTCTTAGGAAACATCTCTAT 57.346 33.333 0.00 0.00 0.00 1.98
5512 6228 9.912634 CTCATCTTCTTAGGAAACATCTCTATC 57.087 37.037 0.00 0.00 0.00 2.08
5513 6229 8.865090 TCATCTTCTTAGGAAACATCTCTATCC 58.135 37.037 0.00 0.00 0.00 2.59
5514 6230 8.646004 CATCTTCTTAGGAAACATCTCTATCCA 58.354 37.037 0.00 0.00 34.30 3.41
5515 6231 8.609617 TCTTCTTAGGAAACATCTCTATCCAA 57.390 34.615 0.00 0.00 34.30 3.53
5516 6232 8.478877 TCTTCTTAGGAAACATCTCTATCCAAC 58.521 37.037 0.00 0.00 34.30 3.77
5517 6233 7.979786 TCTTAGGAAACATCTCTATCCAACT 57.020 36.000 0.00 0.00 34.30 3.16
5518 6234 7.786030 TCTTAGGAAACATCTCTATCCAACTG 58.214 38.462 0.00 0.00 34.30 3.16
5519 6235 4.775236 AGGAAACATCTCTATCCAACTGC 58.225 43.478 0.00 0.00 34.30 4.40
5520 6236 4.472833 AGGAAACATCTCTATCCAACTGCT 59.527 41.667 0.00 0.00 34.30 4.24
5521 6237 4.574013 GGAAACATCTCTATCCAACTGCTG 59.426 45.833 0.00 0.00 32.08 4.41
5522 6238 5.423015 GAAACATCTCTATCCAACTGCTGA 58.577 41.667 0.00 0.00 0.00 4.26
5523 6239 5.426689 AACATCTCTATCCAACTGCTGAA 57.573 39.130 0.00 0.00 0.00 3.02
5524 6240 4.764172 ACATCTCTATCCAACTGCTGAAC 58.236 43.478 0.00 0.00 0.00 3.18
5525 6241 4.469227 ACATCTCTATCCAACTGCTGAACT 59.531 41.667 0.00 0.00 0.00 3.01
5526 6242 4.727507 TCTCTATCCAACTGCTGAACTC 57.272 45.455 0.00 0.00 0.00 3.01
5527 6243 4.348486 TCTCTATCCAACTGCTGAACTCT 58.652 43.478 0.00 0.00 0.00 3.24
5528 6244 4.774726 TCTCTATCCAACTGCTGAACTCTT 59.225 41.667 0.00 0.00 0.00 2.85
5529 6245 5.078411 TCTATCCAACTGCTGAACTCTTC 57.922 43.478 0.00 0.00 0.00 2.87
5530 6246 3.777106 ATCCAACTGCTGAACTCTTCA 57.223 42.857 0.00 0.00 38.17 3.02
5531 6247 3.558931 TCCAACTGCTGAACTCTTCAA 57.441 42.857 0.00 0.00 39.58 2.69
5532 6248 4.090761 TCCAACTGCTGAACTCTTCAAT 57.909 40.909 0.00 0.00 39.58 2.57
5533 6249 4.464008 TCCAACTGCTGAACTCTTCAATT 58.536 39.130 0.00 0.00 39.58 2.32
5534 6250 4.889409 TCCAACTGCTGAACTCTTCAATTT 59.111 37.500 0.00 0.00 39.58 1.82
5535 6251 5.360714 TCCAACTGCTGAACTCTTCAATTTT 59.639 36.000 0.00 0.00 39.58 1.82
5536 6252 5.461078 CCAACTGCTGAACTCTTCAATTTTG 59.539 40.000 0.00 0.00 39.58 2.44
5537 6253 4.614946 ACTGCTGAACTCTTCAATTTTGC 58.385 39.130 0.00 0.00 39.58 3.68
5538 6254 4.098349 ACTGCTGAACTCTTCAATTTTGCA 59.902 37.500 0.00 0.00 39.58 4.08
5539 6255 5.008619 TGCTGAACTCTTCAATTTTGCAA 57.991 34.783 0.00 0.00 39.58 4.08
5540 6256 5.045215 TGCTGAACTCTTCAATTTTGCAAG 58.955 37.500 0.00 0.00 39.58 4.01
5541 6257 4.446719 GCTGAACTCTTCAATTTTGCAAGG 59.553 41.667 0.00 0.00 39.58 3.61
5542 6258 5.737063 GCTGAACTCTTCAATTTTGCAAGGA 60.737 40.000 0.00 0.00 39.58 3.36
5543 6259 6.219417 TGAACTCTTCAATTTTGCAAGGAA 57.781 33.333 0.00 2.30 36.59 3.36
5544 6260 6.819284 TGAACTCTTCAATTTTGCAAGGAAT 58.181 32.000 0.00 0.00 36.59 3.01
5545 6261 7.950512 TGAACTCTTCAATTTTGCAAGGAATA 58.049 30.769 0.00 0.00 36.59 1.75
5546 6262 8.587608 TGAACTCTTCAATTTTGCAAGGAATAT 58.412 29.630 0.00 0.00 36.59 1.28
5547 6263 8.992835 AACTCTTCAATTTTGCAAGGAATATC 57.007 30.769 0.00 0.00 0.00 1.63
5548 6264 8.125978 ACTCTTCAATTTTGCAAGGAATATCA 57.874 30.769 0.00 0.00 0.00 2.15
5549 6265 8.755977 ACTCTTCAATTTTGCAAGGAATATCAT 58.244 29.630 0.00 0.00 0.00 2.45
5559 6275 8.995027 TTGCAAGGAATATCATAAATACCAGT 57.005 30.769 0.00 0.00 0.00 4.00
5560 6276 8.394971 TGCAAGGAATATCATAAATACCAGTG 57.605 34.615 0.00 0.00 0.00 3.66
5561 6277 8.217111 TGCAAGGAATATCATAAATACCAGTGA 58.783 33.333 0.00 0.00 0.00 3.41
5562 6278 8.507249 GCAAGGAATATCATAAATACCAGTGAC 58.493 37.037 0.00 0.00 0.00 3.67
5563 6279 9.559732 CAAGGAATATCATAAATACCAGTGACA 57.440 33.333 0.00 0.00 0.00 3.58
5571 6287 8.958119 TCATAAATACCAGTGACATTCCTAAC 57.042 34.615 0.00 0.00 0.00 2.34
5572 6288 8.544622 TCATAAATACCAGTGACATTCCTAACA 58.455 33.333 0.00 0.00 0.00 2.41
5573 6289 9.173021 CATAAATACCAGTGACATTCCTAACAA 57.827 33.333 0.00 0.00 0.00 2.83
5574 6290 7.448748 AAATACCAGTGACATTCCTAACAAC 57.551 36.000 0.00 0.00 0.00 3.32
5575 6291 3.751518 ACCAGTGACATTCCTAACAACC 58.248 45.455 0.00 0.00 0.00 3.77
5576 6292 3.081804 CCAGTGACATTCCTAACAACCC 58.918 50.000 0.00 0.00 0.00 4.11
5577 6293 3.244911 CCAGTGACATTCCTAACAACCCT 60.245 47.826 0.00 0.00 0.00 4.34
5578 6294 4.003648 CAGTGACATTCCTAACAACCCTC 58.996 47.826 0.00 0.00 0.00 4.30
5579 6295 3.009143 AGTGACATTCCTAACAACCCTCC 59.991 47.826 0.00 0.00 0.00 4.30
5580 6296 2.983192 TGACATTCCTAACAACCCTCCA 59.017 45.455 0.00 0.00 0.00 3.86
5581 6297 3.244770 TGACATTCCTAACAACCCTCCAC 60.245 47.826 0.00 0.00 0.00 4.02
5582 6298 2.714250 ACATTCCTAACAACCCTCCACA 59.286 45.455 0.00 0.00 0.00 4.17
5583 6299 2.943036 TTCCTAACAACCCTCCACAC 57.057 50.000 0.00 0.00 0.00 3.82
5584 6300 1.809133 TCCTAACAACCCTCCACACA 58.191 50.000 0.00 0.00 0.00 3.72
5585 6301 2.128535 TCCTAACAACCCTCCACACAA 58.871 47.619 0.00 0.00 0.00 3.33
5586 6302 2.510382 TCCTAACAACCCTCCACACAAA 59.490 45.455 0.00 0.00 0.00 2.83
5587 6303 2.621526 CCTAACAACCCTCCACACAAAC 59.378 50.000 0.00 0.00 0.00 2.93
5588 6304 2.525105 AACAACCCTCCACACAAACT 57.475 45.000 0.00 0.00 0.00 2.66
5589 6305 2.525105 ACAACCCTCCACACAAACTT 57.475 45.000 0.00 0.00 0.00 2.66
5590 6306 2.099405 ACAACCCTCCACACAAACTTG 58.901 47.619 0.00 0.00 0.00 3.16
5591 6307 1.408702 CAACCCTCCACACAAACTTGG 59.591 52.381 0.00 0.00 0.00 3.61
5592 6308 0.755327 ACCCTCCACACAAACTTGGC 60.755 55.000 0.00 0.00 32.37 4.52
5593 6309 0.468029 CCCTCCACACAAACTTGGCT 60.468 55.000 0.00 0.00 32.37 4.75
5594 6310 1.202879 CCCTCCACACAAACTTGGCTA 60.203 52.381 0.00 0.00 32.37 3.93
5595 6311 1.880027 CCTCCACACAAACTTGGCTAC 59.120 52.381 0.00 0.00 32.37 3.58
5596 6312 1.880027 CTCCACACAAACTTGGCTACC 59.120 52.381 0.00 0.00 32.37 3.18
5597 6313 1.213182 TCCACACAAACTTGGCTACCA 59.787 47.619 0.00 0.00 32.37 3.25
5598 6314 1.336755 CCACACAAACTTGGCTACCAC 59.663 52.381 0.00 0.00 30.78 4.16
5599 6315 2.020720 CACACAAACTTGGCTACCACA 58.979 47.619 0.00 0.00 30.78 4.17
5600 6316 2.021457 ACACAAACTTGGCTACCACAC 58.979 47.619 0.00 0.00 30.78 3.82
5601 6317 2.020720 CACAAACTTGGCTACCACACA 58.979 47.619 0.00 0.00 30.78 3.72
5602 6318 2.425312 CACAAACTTGGCTACCACACAA 59.575 45.455 0.00 0.00 30.78 3.33
5603 6319 2.687935 ACAAACTTGGCTACCACACAAG 59.312 45.455 0.00 0.00 45.27 3.16
5606 6322 0.593128 CTTGGCTACCACACAAGTGC 59.407 55.000 0.00 0.00 44.53 4.40
5607 6323 0.106967 TTGGCTACCACACAAGTGCA 60.107 50.000 0.00 0.00 44.53 4.57
5608 6324 0.106967 TGGCTACCACACAAGTGCAA 60.107 50.000 0.00 0.00 44.53 4.08
5609 6325 1.028905 GGCTACCACACAAGTGCAAA 58.971 50.000 0.00 0.00 44.53 3.68
5610 6326 1.407258 GGCTACCACACAAGTGCAAAA 59.593 47.619 0.00 0.00 44.53 2.44
5611 6327 2.159170 GGCTACCACACAAGTGCAAAAA 60.159 45.455 0.00 0.00 44.53 1.94
5632 6348 7.807977 AAAAAGATGCTCTACAGTTTCAGAA 57.192 32.000 0.00 0.00 0.00 3.02
5633 6349 7.992754 AAAAGATGCTCTACAGTTTCAGAAT 57.007 32.000 0.00 0.00 0.00 2.40
5634 6350 6.981762 AAGATGCTCTACAGTTTCAGAATG 57.018 37.500 0.00 0.00 37.54 2.67
5649 6365 4.644498 TCAGAATGATCACAGAAACTGCA 58.356 39.130 0.00 0.00 42.56 4.41
5650 6366 5.065235 TCAGAATGATCACAGAAACTGCAA 58.935 37.500 0.00 0.00 42.56 4.08
5651 6367 5.049198 TCAGAATGATCACAGAAACTGCAAC 60.049 40.000 0.00 0.00 42.56 4.17
5652 6368 5.048921 CAGAATGATCACAGAAACTGCAACT 60.049 40.000 0.00 0.00 39.69 3.16
5653 6369 5.533903 AGAATGATCACAGAAACTGCAACTT 59.466 36.000 0.00 0.00 34.37 2.66
5654 6370 5.779529 ATGATCACAGAAACTGCAACTTT 57.220 34.783 0.00 0.00 34.37 2.66
5655 6371 5.581126 TGATCACAGAAACTGCAACTTTT 57.419 34.783 0.00 0.00 34.37 2.27
5656 6372 6.691754 TGATCACAGAAACTGCAACTTTTA 57.308 33.333 0.00 0.00 34.37 1.52
5657 6373 7.275888 TGATCACAGAAACTGCAACTTTTAT 57.724 32.000 0.00 0.00 34.37 1.40
5658 6374 7.362662 TGATCACAGAAACTGCAACTTTTATC 58.637 34.615 0.00 0.00 34.37 1.75
5659 6375 6.942532 TCACAGAAACTGCAACTTTTATCT 57.057 33.333 0.00 0.00 34.37 1.98
5660 6376 7.333528 TCACAGAAACTGCAACTTTTATCTT 57.666 32.000 0.00 0.00 34.37 2.40
5661 6377 7.771183 TCACAGAAACTGCAACTTTTATCTTT 58.229 30.769 0.00 0.00 34.37 2.52
5662 6378 8.898761 TCACAGAAACTGCAACTTTTATCTTTA 58.101 29.630 0.00 0.00 34.37 1.85
5663 6379 8.958043 CACAGAAACTGCAACTTTTATCTTTAC 58.042 33.333 0.00 0.00 34.37 2.01
5664 6380 8.135529 ACAGAAACTGCAACTTTTATCTTTACC 58.864 33.333 0.00 0.00 34.37 2.85
5665 6381 8.352942 CAGAAACTGCAACTTTTATCTTTACCT 58.647 33.333 0.00 0.00 0.00 3.08
5666 6382 8.914011 AGAAACTGCAACTTTTATCTTTACCTT 58.086 29.630 0.00 0.00 0.00 3.50
5667 6383 9.529325 GAAACTGCAACTTTTATCTTTACCTTT 57.471 29.630 0.00 0.00 0.00 3.11
5668 6384 9.884636 AAACTGCAACTTTTATCTTTACCTTTT 57.115 25.926 0.00 0.00 0.00 2.27
5669 6385 9.529325 AACTGCAACTTTTATCTTTACCTTTTC 57.471 29.630 0.00 0.00 0.00 2.29
5670 6386 8.691797 ACTGCAACTTTTATCTTTACCTTTTCA 58.308 29.630 0.00 0.00 0.00 2.69
5671 6387 9.185192 CTGCAACTTTTATCTTTACCTTTTCAG 57.815 33.333 0.00 0.00 0.00 3.02
5672 6388 8.691797 TGCAACTTTTATCTTTACCTTTTCAGT 58.308 29.630 0.00 0.00 0.00 3.41
5673 6389 9.529325 GCAACTTTTATCTTTACCTTTTCAGTT 57.471 29.630 0.00 0.00 0.00 3.16
5682 6398 9.967346 ATCTTTACCTTTTCAGTTTCTTTTAGC 57.033 29.630 0.00 0.00 0.00 3.09
5683 6399 9.185680 TCTTTACCTTTTCAGTTTCTTTTAGCT 57.814 29.630 0.00 0.00 0.00 3.32
5688 6404 9.967346 ACCTTTTCAGTTTCTTTTAGCTAAATC 57.033 29.630 19.27 8.29 0.00 2.17
5689 6405 9.411801 CCTTTTCAGTTTCTTTTAGCTAAATCC 57.588 33.333 19.27 6.41 0.00 3.01
5690 6406 9.965824 CTTTTCAGTTTCTTTTAGCTAAATCCA 57.034 29.630 19.27 4.44 0.00 3.41
5691 6407 9.965824 TTTTCAGTTTCTTTTAGCTAAATCCAG 57.034 29.630 19.27 13.74 0.00 3.86
5692 6408 8.918202 TTCAGTTTCTTTTAGCTAAATCCAGA 57.082 30.769 19.27 15.69 0.00 3.86
5693 6409 8.918202 TCAGTTTCTTTTAGCTAAATCCAGAA 57.082 30.769 20.45 20.45 0.00 3.02
5694 6410 9.349713 TCAGTTTCTTTTAGCTAAATCCAGAAA 57.650 29.630 26.29 26.29 31.96 2.52
5695 6411 9.399403 CAGTTTCTTTTAGCTAAATCCAGAAAC 57.601 33.333 35.89 35.89 43.00 2.78
5696 6412 9.131791 AGTTTCTTTTAGCTAAATCCAGAAACA 57.868 29.630 38.98 23.93 43.88 2.83
5697 6413 9.181805 GTTTCTTTTAGCTAAATCCAGAAACAC 57.818 33.333 36.66 26.06 42.67 3.32
5698 6414 8.691661 TTCTTTTAGCTAAATCCAGAAACACT 57.308 30.769 21.42 0.00 0.00 3.55
5699 6415 8.099364 TCTTTTAGCTAAATCCAGAAACACTG 57.901 34.615 19.27 0.00 45.36 3.66
5700 6416 5.880054 TTAGCTAAATCCAGAAACACTGC 57.120 39.130 2.97 0.00 44.52 4.40
5701 6417 3.084786 AGCTAAATCCAGAAACACTGCC 58.915 45.455 0.00 0.00 44.52 4.85
5702 6418 2.819608 GCTAAATCCAGAAACACTGCCA 59.180 45.455 0.00 0.00 44.52 4.92
5703 6419 3.366374 GCTAAATCCAGAAACACTGCCAC 60.366 47.826 0.00 0.00 44.52 5.01
5704 6420 2.664402 AATCCAGAAACACTGCCACT 57.336 45.000 0.00 0.00 44.52 4.00
5705 6421 2.664402 ATCCAGAAACACTGCCACTT 57.336 45.000 0.00 0.00 44.52 3.16
5706 6422 2.435372 TCCAGAAACACTGCCACTTT 57.565 45.000 0.00 0.00 44.52 2.66
5707 6423 2.733956 TCCAGAAACACTGCCACTTTT 58.266 42.857 0.00 0.00 44.52 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.263170 TCGAAATCAACAAGGGGATCTCA 59.737 43.478 0.00 0.00 0.00 3.27
1 2 3.623510 GTCGAAATCAACAAGGGGATCTC 59.376 47.826 0.00 0.00 0.00 2.75
2 3 3.009033 TGTCGAAATCAACAAGGGGATCT 59.991 43.478 0.00 0.00 0.00 2.75
3 4 3.343617 TGTCGAAATCAACAAGGGGATC 58.656 45.455 0.00 0.00 0.00 3.36
4 5 3.433306 TGTCGAAATCAACAAGGGGAT 57.567 42.857 0.00 0.00 0.00 3.85
5 6 2.940994 TGTCGAAATCAACAAGGGGA 57.059 45.000 0.00 0.00 0.00 4.81
6 7 2.164219 CCATGTCGAAATCAACAAGGGG 59.836 50.000 0.00 0.00 32.07 4.79
36 37 2.584835 TTATATGTCATGGGCTGCCC 57.415 50.000 30.97 30.97 45.71 5.36
78 79 3.225940 AGTCCTCGCAGATCATGTATGA 58.774 45.455 0.00 0.00 41.70 2.15
104 106 3.181489 CCTAGTTGGCTACGTACAAGGAG 60.181 52.174 0.00 0.00 0.00 3.69
125 127 4.107072 GGGGGTTATAGGGTATTAGGTCC 58.893 52.174 0.00 0.00 0.00 4.46
250 252 5.751680 TCGAGGAAATAATAACCTACGTCG 58.248 41.667 0.00 0.00 33.89 5.12
296 298 9.338622 TGAAATGAGAGTAACAGAGATACGATA 57.661 33.333 0.00 0.00 0.00 2.92
298 300 7.625828 TGAAATGAGAGTAACAGAGATACGA 57.374 36.000 0.00 0.00 0.00 3.43
350 352 5.479375 ACAGAACCTAAACCGTCAGATCTTA 59.521 40.000 0.00 0.00 0.00 2.10
406 408 8.020819 TCGCTTAATCAAATTGTTGGTTTAGAG 58.979 33.333 3.37 0.76 36.87 2.43
642 644 4.301072 TTTGCTAAAGAGTGCCATAGGT 57.699 40.909 0.00 0.00 0.00 3.08
644 646 5.412594 TCAGTTTTGCTAAAGAGTGCCATAG 59.587 40.000 0.00 0.00 0.00 2.23
708 710 6.893005 TGGTCTTTTTCTCCTGTCCTTTTTAA 59.107 34.615 0.00 0.00 0.00 1.52
709 711 6.428295 TGGTCTTTTTCTCCTGTCCTTTTTA 58.572 36.000 0.00 0.00 0.00 1.52
715 719 3.815962 GACTTGGTCTTTTTCTCCTGTCC 59.184 47.826 0.00 0.00 0.00 4.02
746 750 1.266178 TTCTCCCGTGAGATTGCTGA 58.734 50.000 0.00 0.00 46.75 4.26
749 753 1.740025 CCTTTTCTCCCGTGAGATTGC 59.260 52.381 0.00 0.00 46.75 3.56
1006 1027 1.997874 CCTTGGTCTCCTCCCCCTG 60.998 68.421 0.00 0.00 0.00 4.45
1652 1675 2.407340 TTTGGCCCCCTGTTAATTGT 57.593 45.000 0.00 0.00 0.00 2.71
1661 1684 2.707554 TGGTTAAAATTTTGGCCCCCT 58.292 42.857 13.76 0.00 0.00 4.79
1836 1859 3.877357 CCAGCTGCTGCATCTGCG 61.877 66.667 24.03 15.11 45.83 5.18
1975 2009 5.421056 TCCCGGTACAACATCATCTATATCC 59.579 44.000 0.00 0.00 0.00 2.59
2049 2087 3.845781 AGAAACTCTCCTCAACTTGCA 57.154 42.857 0.00 0.00 0.00 4.08
2058 2096 4.396357 TCTCTCTGGAAGAAACTCTCCT 57.604 45.455 0.00 0.00 46.34 3.69
2392 2591 4.958581 TCAGAGACATCCTACACATCATGT 59.041 41.667 0.00 0.00 46.06 3.21
2402 2601 6.373005 TTGTTGGAAATCAGAGACATCCTA 57.627 37.500 0.00 0.00 0.00 2.94
2418 2617 0.764890 CTGGGTCTGTCCTTGTTGGA 59.235 55.000 0.00 0.00 43.86 3.53
2419 2618 0.474184 ACTGGGTCTGTCCTTGTTGG 59.526 55.000 0.00 0.00 36.25 3.77
2420 2619 1.597742 CACTGGGTCTGTCCTTGTTG 58.402 55.000 0.00 0.00 36.25 3.33
2421 2620 0.179018 GCACTGGGTCTGTCCTTGTT 60.179 55.000 0.00 0.00 36.25 2.83
2422 2621 1.344953 TGCACTGGGTCTGTCCTTGT 61.345 55.000 0.00 0.00 36.25 3.16
2423 2622 0.037303 ATGCACTGGGTCTGTCCTTG 59.963 55.000 0.00 0.00 36.25 3.61
2424 2623 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2425 2624 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2426 2625 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2427 2626 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2428 2627 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2429 2628 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2430 2629 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2431 2630 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2432 2631 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2433 2632 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2434 2633 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2435 2634 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2436 2635 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2437 2636 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2438 2637 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2439 2638 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2440 2639 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2441 2640 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2442 2641 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2443 2642 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2444 2643 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2445 2644 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2452 2651 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2453 2652 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2454 2653 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2455 2654 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2456 2655 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2457 2656 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2458 2657 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2460 2659 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2461 2660 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2462 2661 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2463 2662 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2464 2663 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2465 2664 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2466 2665 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2467 2666 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2468 2667 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2469 2668 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2470 2669 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2471 2670 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2472 2671 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2473 2672 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2474 2673 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2475 2674 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2476 2675 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2477 2676 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2478 2677 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2479 2678 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2480 2679 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2481 2680 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2482 2681 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2483 2682 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2484 2683 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2485 2684 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2486 2685 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2487 2686 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2488 2687 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2489 2688 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2490 2689 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2491 2690 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2492 2691 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2502 2701 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2503 2702 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2504 2703 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2505 2704 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2506 2705 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2507 2706 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2508 2707 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2509 2708 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2510 2709 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2511 2710 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2512 2711 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2513 2712 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2514 2713 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2515 2714 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
2526 2725 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
2527 2726 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
2528 2727 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
2529 2728 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
2530 2729 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
2531 2730 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
2532 2731 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
2533 2732 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
2534 2733 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
2535 2734 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2536 2735 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
2537 2736 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
2538 2737 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
2539 2738 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
2540 2739 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
2541 2740 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
2542 2741 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
2543 2742 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
2544 2743 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
2545 2744 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
2546 2745 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
2547 2746 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
2548 2747 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
2549 2748 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
2550 2749 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
2551 2750 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
2552 2751 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
2553 2752 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
2554 2753 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
2555 2754 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
2556 2755 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2557 2756 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
2558 2757 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
2559 2758 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
2560 2759 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
2561 2760 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
2562 2761 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
2563 2762 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
2576 2775 3.795041 CAGAGAGGGCAGGCCTGG 61.795 72.222 33.46 15.81 36.10 4.45
2577 2776 1.633915 AATCAGAGAGGGCAGGCCTG 61.634 60.000 29.34 29.34 36.10 4.85
2578 2777 0.918310 AAATCAGAGAGGGCAGGCCT 60.918 55.000 17.36 17.36 36.10 5.19
2579 2778 0.465278 GAAATCAGAGAGGGCAGGCC 60.465 60.000 4.33 4.33 0.00 5.19
2580 2779 0.465278 GGAAATCAGAGAGGGCAGGC 60.465 60.000 0.00 0.00 0.00 4.85
2581 2780 0.914644 TGGAAATCAGAGAGGGCAGG 59.085 55.000 0.00 0.00 0.00 4.85
2582 2781 2.290514 TGTTGGAAATCAGAGAGGGCAG 60.291 50.000 0.00 0.00 0.00 4.85
2583 2782 1.704628 TGTTGGAAATCAGAGAGGGCA 59.295 47.619 0.00 0.00 0.00 5.36
2584 2783 2.496899 TGTTGGAAATCAGAGAGGGC 57.503 50.000 0.00 0.00 0.00 5.19
2585 2784 4.381292 GCATTTGTTGGAAATCAGAGAGGG 60.381 45.833 0.00 0.00 0.00 4.30
2586 2785 4.673580 CGCATTTGTTGGAAATCAGAGAGG 60.674 45.833 0.00 0.00 0.00 3.69
2587 2786 4.409570 CGCATTTGTTGGAAATCAGAGAG 58.590 43.478 0.00 0.00 0.00 3.20
2622 2821 1.482182 GGTGCCCATTCAAGGAATTCC 59.518 52.381 17.31 17.31 28.87 3.01
2933 3133 3.507233 ACAGCACAAATGTATGAACCCAG 59.493 43.478 5.29 0.00 0.00 4.45
3315 3517 0.389948 CGGGTTCGAGTCCTGGAAAG 60.390 60.000 0.00 0.00 39.00 2.62
3427 3657 2.301870 TGTGTGCAGGTAGGGTAGAAAG 59.698 50.000 0.00 0.00 0.00 2.62
4003 4237 6.900568 TTGCAATTTTAAGACACAACTTGG 57.099 33.333 0.00 0.00 0.00 3.61
4030 4265 4.525487 AGGAAACAAATGACTGACATGCAT 59.475 37.500 0.00 0.00 39.39 3.96
4208 4445 3.152341 CAGGCTCACCAAACTGATTTCT 58.848 45.455 0.00 0.00 39.06 2.52
4272 4509 4.439700 CCAAATCTGTGATCTGGCATTGTC 60.440 45.833 0.00 0.00 0.00 3.18
4328 4565 2.609459 CCGCTAATTTCTGCTGTACTGG 59.391 50.000 1.65 0.00 0.00 4.00
4366 4603 1.698165 ACGTGCTGTAACGAGACATG 58.302 50.000 11.09 0.00 46.49 3.21
4378 4615 5.291858 TGAAGAAGCAGAATATTACGTGCTG 59.708 40.000 16.28 8.05 45.51 4.41
4530 4769 9.407380 GGGAGCAAAAATTAAAATGGGATATTT 57.593 29.630 0.00 0.00 0.00 1.40
4531 4770 7.714813 CGGGAGCAAAAATTAAAATGGGATATT 59.285 33.333 0.00 0.00 0.00 1.28
4532 4771 7.216494 CGGGAGCAAAAATTAAAATGGGATAT 58.784 34.615 0.00 0.00 0.00 1.63
4533 4772 6.578023 CGGGAGCAAAAATTAAAATGGGATA 58.422 36.000 0.00 0.00 0.00 2.59
4534 4773 5.427378 CGGGAGCAAAAATTAAAATGGGAT 58.573 37.500 0.00 0.00 0.00 3.85
4535 4774 4.826556 CGGGAGCAAAAATTAAAATGGGA 58.173 39.130 0.00 0.00 0.00 4.37
4608 4880 5.437289 AATTCAGCAAAATGAACGAGACA 57.563 34.783 0.00 0.00 41.76 3.41
4720 5425 4.637968 CACACAAATTATTGTCGACGGAG 58.362 43.478 11.62 0.00 46.78 4.63
4721 5426 3.120477 GCACACAAATTATTGTCGACGGA 60.120 43.478 11.62 2.13 46.78 4.69
4795 5502 3.649073 TCACCTCACAACAATACACGAG 58.351 45.455 0.00 0.00 0.00 4.18
5180 5896 1.239968 GCTCAAGCTGAAGTGGGTGG 61.240 60.000 0.00 0.00 38.21 4.61
5262 5978 1.143305 CTGGAGTTGTGTTCTGCGAG 58.857 55.000 0.00 0.00 0.00 5.03
5312 6028 2.599757 GCCTTCCCGTAACCCCACT 61.600 63.158 0.00 0.00 0.00 4.00
5395 6111 1.413118 CAAGCCAACCCCTCTTGTTT 58.587 50.000 0.00 0.00 34.20 2.83
5396 6112 0.469892 CCAAGCCAACCCCTCTTGTT 60.470 55.000 0.00 0.00 36.41 2.83
5399 6115 1.778383 TCCCAAGCCAACCCCTCTT 60.778 57.895 0.00 0.00 0.00 2.85
5404 6120 2.649129 GCATGTCCCAAGCCAACCC 61.649 63.158 0.00 0.00 0.00 4.11
5405 6121 2.649129 GGCATGTCCCAAGCCAACC 61.649 63.158 5.66 0.00 46.03 3.77
5406 6122 2.973082 GGCATGTCCCAAGCCAAC 59.027 61.111 5.66 0.00 46.03 3.77
5434 6150 6.338146 GGTATTCTGGTTTTTATGGAAAGCC 58.662 40.000 3.36 3.36 45.78 4.35
5435 6151 6.033966 CGGTATTCTGGTTTTTATGGAAAGC 58.966 40.000 0.00 0.00 37.49 3.51
5436 6152 6.033966 GCGGTATTCTGGTTTTTATGGAAAG 58.966 40.000 0.00 0.00 0.00 2.62
5437 6153 5.105675 GGCGGTATTCTGGTTTTTATGGAAA 60.106 40.000 0.00 0.00 0.00 3.13
5438 6154 4.399934 GGCGGTATTCTGGTTTTTATGGAA 59.600 41.667 0.00 0.00 0.00 3.53
5439 6155 3.949113 GGCGGTATTCTGGTTTTTATGGA 59.051 43.478 0.00 0.00 0.00 3.41
5440 6156 3.242936 CGGCGGTATTCTGGTTTTTATGG 60.243 47.826 0.00 0.00 0.00 2.74
5441 6157 3.790789 GCGGCGGTATTCTGGTTTTTATG 60.791 47.826 9.78 0.00 0.00 1.90
5442 6158 2.356695 GCGGCGGTATTCTGGTTTTTAT 59.643 45.455 9.78 0.00 0.00 1.40
5443 6159 1.738908 GCGGCGGTATTCTGGTTTTTA 59.261 47.619 9.78 0.00 0.00 1.52
5444 6160 0.524414 GCGGCGGTATTCTGGTTTTT 59.476 50.000 9.78 0.00 0.00 1.94
5445 6161 0.322187 AGCGGCGGTATTCTGGTTTT 60.322 50.000 11.06 0.00 0.00 2.43
5446 6162 0.538118 TAGCGGCGGTATTCTGGTTT 59.462 50.000 15.64 0.00 0.00 3.27
5447 6163 0.179092 GTAGCGGCGGTATTCTGGTT 60.179 55.000 22.44 0.00 0.00 3.67
5448 6164 1.324740 TGTAGCGGCGGTATTCTGGT 61.325 55.000 22.44 0.00 0.00 4.00
5449 6165 0.874607 GTGTAGCGGCGGTATTCTGG 60.875 60.000 22.44 0.00 0.00 3.86
5450 6166 0.874607 GGTGTAGCGGCGGTATTCTG 60.875 60.000 22.44 0.00 0.00 3.02
5451 6167 1.440476 GGTGTAGCGGCGGTATTCT 59.560 57.895 22.44 5.61 0.00 2.40
5452 6168 1.593479 GGGTGTAGCGGCGGTATTC 60.593 63.158 22.44 16.58 0.00 1.75
5453 6169 2.360767 TGGGTGTAGCGGCGGTATT 61.361 57.895 22.44 0.00 0.00 1.89
5454 6170 2.760799 TGGGTGTAGCGGCGGTAT 60.761 61.111 22.44 0.00 0.00 2.73
5455 6171 3.762247 GTGGGTGTAGCGGCGGTA 61.762 66.667 15.64 15.64 0.00 4.02
5459 6175 3.014085 TAGCAGTGGGTGTAGCGGC 62.014 63.158 0.00 0.00 0.00 6.53
5460 6176 1.153628 GTAGCAGTGGGTGTAGCGG 60.154 63.158 0.00 0.00 0.00 5.52
5461 6177 0.458543 CAGTAGCAGTGGGTGTAGCG 60.459 60.000 0.00 0.00 0.00 4.26
5462 6178 0.608640 ACAGTAGCAGTGGGTGTAGC 59.391 55.000 0.00 0.00 0.00 3.58
5463 6179 3.067106 CAAACAGTAGCAGTGGGTGTAG 58.933 50.000 0.00 0.00 0.00 2.74
5464 6180 2.436542 ACAAACAGTAGCAGTGGGTGTA 59.563 45.455 0.00 0.00 0.00 2.90
5465 6181 1.211949 ACAAACAGTAGCAGTGGGTGT 59.788 47.619 0.00 0.00 0.00 4.16
5466 6182 1.873591 GACAAACAGTAGCAGTGGGTG 59.126 52.381 0.00 0.00 0.00 4.61
5467 6183 1.768870 AGACAAACAGTAGCAGTGGGT 59.231 47.619 0.00 0.00 0.00 4.51
5468 6184 2.224281 TGAGACAAACAGTAGCAGTGGG 60.224 50.000 0.00 0.00 0.00 4.61
5469 6185 3.111853 TGAGACAAACAGTAGCAGTGG 57.888 47.619 0.00 0.00 0.00 4.00
5470 6186 4.564041 AGATGAGACAAACAGTAGCAGTG 58.436 43.478 0.00 0.00 0.00 3.66
5471 6187 4.881019 AGATGAGACAAACAGTAGCAGT 57.119 40.909 0.00 0.00 0.00 4.40
5472 6188 5.477510 AGAAGATGAGACAAACAGTAGCAG 58.522 41.667 0.00 0.00 0.00 4.24
5473 6189 5.474578 AGAAGATGAGACAAACAGTAGCA 57.525 39.130 0.00 0.00 0.00 3.49
5474 6190 6.533367 CCTAAGAAGATGAGACAAACAGTAGC 59.467 42.308 0.00 0.00 0.00 3.58
5475 6191 7.831753 TCCTAAGAAGATGAGACAAACAGTAG 58.168 38.462 0.00 0.00 0.00 2.57
5476 6192 7.776618 TCCTAAGAAGATGAGACAAACAGTA 57.223 36.000 0.00 0.00 0.00 2.74
5477 6193 6.672266 TCCTAAGAAGATGAGACAAACAGT 57.328 37.500 0.00 0.00 0.00 3.55
5478 6194 7.442364 TGTTTCCTAAGAAGATGAGACAAACAG 59.558 37.037 0.00 0.00 32.35 3.16
5479 6195 7.279615 TGTTTCCTAAGAAGATGAGACAAACA 58.720 34.615 0.00 0.00 32.35 2.83
5480 6196 7.730364 TGTTTCCTAAGAAGATGAGACAAAC 57.270 36.000 0.00 0.00 32.35 2.93
5481 6197 8.378565 AGATGTTTCCTAAGAAGATGAGACAAA 58.621 33.333 0.00 0.00 32.35 2.83
5482 6198 7.911651 AGATGTTTCCTAAGAAGATGAGACAA 58.088 34.615 0.00 0.00 32.35 3.18
5483 6199 7.398618 AGAGATGTTTCCTAAGAAGATGAGACA 59.601 37.037 0.00 0.00 32.35 3.41
5484 6200 7.781056 AGAGATGTTTCCTAAGAAGATGAGAC 58.219 38.462 0.00 0.00 32.35 3.36
5485 6201 7.969690 AGAGATGTTTCCTAAGAAGATGAGA 57.030 36.000 0.00 0.00 32.35 3.27
5486 6202 9.912634 GATAGAGATGTTTCCTAAGAAGATGAG 57.087 37.037 0.00 0.00 32.35 2.90
5487 6203 8.865090 GGATAGAGATGTTTCCTAAGAAGATGA 58.135 37.037 0.00 0.00 32.35 2.92
5488 6204 8.646004 TGGATAGAGATGTTTCCTAAGAAGATG 58.354 37.037 0.00 0.00 32.35 2.90
5489 6205 8.789767 TGGATAGAGATGTTTCCTAAGAAGAT 57.210 34.615 0.00 0.00 32.35 2.40
5490 6206 8.478877 GTTGGATAGAGATGTTTCCTAAGAAGA 58.521 37.037 0.00 0.00 32.35 2.87
5491 6207 8.482128 AGTTGGATAGAGATGTTTCCTAAGAAG 58.518 37.037 0.00 0.00 32.35 2.85
5492 6208 8.260818 CAGTTGGATAGAGATGTTTCCTAAGAA 58.739 37.037 0.00 0.00 0.00 2.52
5493 6209 7.633772 GCAGTTGGATAGAGATGTTTCCTAAGA 60.634 40.741 0.00 0.00 0.00 2.10
5494 6210 6.481644 GCAGTTGGATAGAGATGTTTCCTAAG 59.518 42.308 0.00 0.00 0.00 2.18
5495 6211 6.156949 AGCAGTTGGATAGAGATGTTTCCTAA 59.843 38.462 0.00 0.00 0.00 2.69
5496 6212 5.663106 AGCAGTTGGATAGAGATGTTTCCTA 59.337 40.000 0.00 0.00 0.00 2.94
5497 6213 4.472833 AGCAGTTGGATAGAGATGTTTCCT 59.527 41.667 0.00 0.00 0.00 3.36
5498 6214 4.574013 CAGCAGTTGGATAGAGATGTTTCC 59.426 45.833 0.00 0.00 0.00 3.13
5499 6215 5.423015 TCAGCAGTTGGATAGAGATGTTTC 58.577 41.667 0.00 0.00 0.00 2.78
5500 6216 5.426689 TCAGCAGTTGGATAGAGATGTTT 57.573 39.130 0.00 0.00 0.00 2.83
5501 6217 5.046014 AGTTCAGCAGTTGGATAGAGATGTT 60.046 40.000 0.00 0.00 0.00 2.71
5502 6218 4.469227 AGTTCAGCAGTTGGATAGAGATGT 59.531 41.667 0.00 0.00 0.00 3.06
5503 6219 5.021033 AGTTCAGCAGTTGGATAGAGATG 57.979 43.478 0.00 0.00 0.00 2.90
5504 6220 4.961730 AGAGTTCAGCAGTTGGATAGAGAT 59.038 41.667 0.00 0.00 0.00 2.75
5505 6221 4.348486 AGAGTTCAGCAGTTGGATAGAGA 58.652 43.478 0.00 0.00 0.00 3.10
5506 6222 4.734398 AGAGTTCAGCAGTTGGATAGAG 57.266 45.455 0.00 0.00 0.00 2.43
5507 6223 4.528206 TGAAGAGTTCAGCAGTTGGATAGA 59.472 41.667 0.00 0.00 34.08 1.98
5508 6224 4.825422 TGAAGAGTTCAGCAGTTGGATAG 58.175 43.478 0.00 0.00 34.08 2.08
5509 6225 4.890158 TGAAGAGTTCAGCAGTTGGATA 57.110 40.909 0.00 0.00 34.08 2.59
5510 6226 3.777106 TGAAGAGTTCAGCAGTTGGAT 57.223 42.857 0.00 0.00 34.08 3.41
5511 6227 3.558931 TTGAAGAGTTCAGCAGTTGGA 57.441 42.857 0.00 0.00 41.38 3.53
5512 6228 4.843220 AATTGAAGAGTTCAGCAGTTGG 57.157 40.909 0.00 0.00 41.38 3.77
5513 6229 5.051240 GCAAAATTGAAGAGTTCAGCAGTTG 60.051 40.000 0.00 0.00 41.38 3.16
5514 6230 5.045872 GCAAAATTGAAGAGTTCAGCAGTT 58.954 37.500 0.00 0.00 41.38 3.16
5515 6231 4.098349 TGCAAAATTGAAGAGTTCAGCAGT 59.902 37.500 0.00 0.00 41.38 4.40
5516 6232 4.613944 TGCAAAATTGAAGAGTTCAGCAG 58.386 39.130 0.00 0.00 41.38 4.24
5517 6233 4.652421 TGCAAAATTGAAGAGTTCAGCA 57.348 36.364 0.00 0.00 41.38 4.41
5518 6234 4.446719 CCTTGCAAAATTGAAGAGTTCAGC 59.553 41.667 0.00 0.00 41.38 4.26
5519 6235 5.835257 TCCTTGCAAAATTGAAGAGTTCAG 58.165 37.500 0.00 0.00 41.38 3.02
5520 6236 5.850557 TCCTTGCAAAATTGAAGAGTTCA 57.149 34.783 0.00 0.00 38.04 3.18
5521 6237 8.992835 ATATTCCTTGCAAAATTGAAGAGTTC 57.007 30.769 0.00 0.00 0.00 3.01
5522 6238 8.587608 TGATATTCCTTGCAAAATTGAAGAGTT 58.412 29.630 0.00 0.00 0.00 3.01
5523 6239 8.125978 TGATATTCCTTGCAAAATTGAAGAGT 57.874 30.769 0.00 0.00 0.00 3.24
5533 6249 9.420118 ACTGGTATTTATGATATTCCTTGCAAA 57.580 29.630 0.00 0.00 0.00 3.68
5534 6250 8.849168 CACTGGTATTTATGATATTCCTTGCAA 58.151 33.333 0.00 0.00 0.00 4.08
5535 6251 8.217111 TCACTGGTATTTATGATATTCCTTGCA 58.783 33.333 0.00 0.00 0.00 4.08
5536 6252 8.507249 GTCACTGGTATTTATGATATTCCTTGC 58.493 37.037 0.00 0.00 0.00 4.01
5537 6253 9.559732 TGTCACTGGTATTTATGATATTCCTTG 57.440 33.333 0.00 0.00 0.00 3.61
5545 6261 9.561069 GTTAGGAATGTCACTGGTATTTATGAT 57.439 33.333 0.00 0.00 0.00 2.45
5546 6262 8.544622 TGTTAGGAATGTCACTGGTATTTATGA 58.455 33.333 0.00 0.00 0.00 2.15
5547 6263 8.731275 TGTTAGGAATGTCACTGGTATTTATG 57.269 34.615 0.00 0.00 0.00 1.90
5548 6264 9.174166 GTTGTTAGGAATGTCACTGGTATTTAT 57.826 33.333 0.00 0.00 0.00 1.40
5549 6265 7.608761 GGTTGTTAGGAATGTCACTGGTATTTA 59.391 37.037 0.00 0.00 0.00 1.40
5550 6266 6.433093 GGTTGTTAGGAATGTCACTGGTATTT 59.567 38.462 0.00 0.00 0.00 1.40
5551 6267 5.944007 GGTTGTTAGGAATGTCACTGGTATT 59.056 40.000 0.00 0.00 0.00 1.89
5552 6268 5.497474 GGTTGTTAGGAATGTCACTGGTAT 58.503 41.667 0.00 0.00 0.00 2.73
5553 6269 4.263156 GGGTTGTTAGGAATGTCACTGGTA 60.263 45.833 0.00 0.00 0.00 3.25
5554 6270 3.497942 GGGTTGTTAGGAATGTCACTGGT 60.498 47.826 0.00 0.00 0.00 4.00
5555 6271 3.081804 GGGTTGTTAGGAATGTCACTGG 58.918 50.000 0.00 0.00 0.00 4.00
5556 6272 4.003648 GAGGGTTGTTAGGAATGTCACTG 58.996 47.826 0.00 0.00 0.00 3.66
5557 6273 3.009143 GGAGGGTTGTTAGGAATGTCACT 59.991 47.826 0.00 0.00 0.00 3.41
5558 6274 3.244770 TGGAGGGTTGTTAGGAATGTCAC 60.245 47.826 0.00 0.00 0.00 3.67
5559 6275 2.983192 TGGAGGGTTGTTAGGAATGTCA 59.017 45.455 0.00 0.00 0.00 3.58
5560 6276 3.244770 TGTGGAGGGTTGTTAGGAATGTC 60.245 47.826 0.00 0.00 0.00 3.06
5561 6277 2.714250 TGTGGAGGGTTGTTAGGAATGT 59.286 45.455 0.00 0.00 0.00 2.71
5562 6278 3.081804 GTGTGGAGGGTTGTTAGGAATG 58.918 50.000 0.00 0.00 0.00 2.67
5563 6279 2.714250 TGTGTGGAGGGTTGTTAGGAAT 59.286 45.455 0.00 0.00 0.00 3.01
5564 6280 2.128535 TGTGTGGAGGGTTGTTAGGAA 58.871 47.619 0.00 0.00 0.00 3.36
5565 6281 1.809133 TGTGTGGAGGGTTGTTAGGA 58.191 50.000 0.00 0.00 0.00 2.94
5566 6282 2.621526 GTTTGTGTGGAGGGTTGTTAGG 59.378 50.000 0.00 0.00 0.00 2.69
5567 6283 3.551846 AGTTTGTGTGGAGGGTTGTTAG 58.448 45.455 0.00 0.00 0.00 2.34
5568 6284 3.655615 AGTTTGTGTGGAGGGTTGTTA 57.344 42.857 0.00 0.00 0.00 2.41
5569 6285 2.495669 CAAGTTTGTGTGGAGGGTTGTT 59.504 45.455 0.00 0.00 0.00 2.83
5570 6286 2.099405 CAAGTTTGTGTGGAGGGTTGT 58.901 47.619 0.00 0.00 0.00 3.32
5571 6287 1.408702 CCAAGTTTGTGTGGAGGGTTG 59.591 52.381 0.00 0.00 37.03 3.77
5572 6288 1.775385 CCAAGTTTGTGTGGAGGGTT 58.225 50.000 0.00 0.00 37.03 4.11
5573 6289 0.755327 GCCAAGTTTGTGTGGAGGGT 60.755 55.000 0.00 0.00 37.03 4.34
5574 6290 0.468029 AGCCAAGTTTGTGTGGAGGG 60.468 55.000 0.00 0.00 37.03 4.30
5575 6291 1.880027 GTAGCCAAGTTTGTGTGGAGG 59.120 52.381 0.00 0.00 37.03 4.30
5576 6292 1.880027 GGTAGCCAAGTTTGTGTGGAG 59.120 52.381 0.00 0.00 37.03 3.86
5577 6293 1.213182 TGGTAGCCAAGTTTGTGTGGA 59.787 47.619 0.00 0.00 37.03 4.02
5578 6294 1.336755 GTGGTAGCCAAGTTTGTGTGG 59.663 52.381 0.00 0.00 34.18 4.17
5579 6295 2.020720 TGTGGTAGCCAAGTTTGTGTG 58.979 47.619 0.00 0.00 34.18 3.82
5580 6296 2.021457 GTGTGGTAGCCAAGTTTGTGT 58.979 47.619 0.00 0.00 34.18 3.72
5581 6297 2.020720 TGTGTGGTAGCCAAGTTTGTG 58.979 47.619 0.00 0.00 34.18 3.33
5582 6298 2.428544 TGTGTGGTAGCCAAGTTTGT 57.571 45.000 0.00 0.00 34.18 2.83
5583 6299 2.687935 ACTTGTGTGGTAGCCAAGTTTG 59.312 45.455 8.64 0.00 44.68 2.93
5584 6300 2.687935 CACTTGTGTGGTAGCCAAGTTT 59.312 45.455 10.99 0.00 44.68 2.66
5585 6301 2.297701 CACTTGTGTGGTAGCCAAGTT 58.702 47.619 10.99 0.00 44.68 2.66
5587 6303 0.593128 GCACTTGTGTGGTAGCCAAG 59.407 55.000 7.57 7.57 43.97 3.61
5588 6304 0.106967 TGCACTTGTGTGGTAGCCAA 60.107 50.000 2.61 0.00 43.97 4.52
5589 6305 0.106967 TTGCACTTGTGTGGTAGCCA 60.107 50.000 2.61 0.00 43.97 4.75
5590 6306 1.028905 TTTGCACTTGTGTGGTAGCC 58.971 50.000 2.61 0.00 43.97 3.93
5591 6307 2.861462 TTTTGCACTTGTGTGGTAGC 57.139 45.000 2.61 0.00 43.97 3.58
5613 6329 6.760298 TGATCATTCTGAAACTGTAGAGCATC 59.240 38.462 0.00 0.00 0.00 3.91
5614 6330 6.538021 GTGATCATTCTGAAACTGTAGAGCAT 59.462 38.462 0.00 0.00 0.00 3.79
5615 6331 5.871524 GTGATCATTCTGAAACTGTAGAGCA 59.128 40.000 0.00 0.00 0.00 4.26
5616 6332 5.871524 TGTGATCATTCTGAAACTGTAGAGC 59.128 40.000 0.00 0.00 0.00 4.09
5617 6333 7.318893 TCTGTGATCATTCTGAAACTGTAGAG 58.681 38.462 0.00 0.00 0.00 2.43
5618 6334 7.232118 TCTGTGATCATTCTGAAACTGTAGA 57.768 36.000 0.00 0.00 0.00 2.59
5619 6335 7.895975 TTCTGTGATCATTCTGAAACTGTAG 57.104 36.000 0.00 0.00 0.00 2.74
5620 6336 7.933577 AGTTTCTGTGATCATTCTGAAACTGTA 59.066 33.333 29.85 8.98 46.32 2.74
5621 6337 6.769822 AGTTTCTGTGATCATTCTGAAACTGT 59.230 34.615 29.85 18.32 46.32 3.55
5622 6338 7.199541 AGTTTCTGTGATCATTCTGAAACTG 57.800 36.000 29.85 11.18 46.32 3.16
5624 6340 5.855395 GCAGTTTCTGTGATCATTCTGAAAC 59.145 40.000 25.35 25.35 41.74 2.78
5625 6341 5.532032 TGCAGTTTCTGTGATCATTCTGAAA 59.468 36.000 0.00 6.49 33.43 2.69
5626 6342 5.065235 TGCAGTTTCTGTGATCATTCTGAA 58.935 37.500 0.00 0.00 33.43 3.02
5627 6343 4.644498 TGCAGTTTCTGTGATCATTCTGA 58.356 39.130 0.00 0.00 33.43 3.27
5628 6344 5.048921 AGTTGCAGTTTCTGTGATCATTCTG 60.049 40.000 0.00 3.46 33.43 3.02
5629 6345 5.068636 AGTTGCAGTTTCTGTGATCATTCT 58.931 37.500 0.00 0.00 33.43 2.40
5630 6346 5.368256 AGTTGCAGTTTCTGTGATCATTC 57.632 39.130 0.00 0.00 33.43 2.67
5631 6347 5.779529 AAGTTGCAGTTTCTGTGATCATT 57.220 34.783 0.00 0.00 33.43 2.57
5632 6348 5.779529 AAAGTTGCAGTTTCTGTGATCAT 57.220 34.783 0.00 0.00 33.43 2.45
5633 6349 5.581126 AAAAGTTGCAGTTTCTGTGATCA 57.419 34.783 0.00 0.00 33.43 2.92
5634 6350 7.588512 AGATAAAAGTTGCAGTTTCTGTGATC 58.411 34.615 0.00 0.00 33.43 2.92
5635 6351 7.516198 AGATAAAAGTTGCAGTTTCTGTGAT 57.484 32.000 0.00 0.00 33.43 3.06
5636 6352 6.942532 AGATAAAAGTTGCAGTTTCTGTGA 57.057 33.333 0.00 0.00 33.43 3.58
5637 6353 7.992180 AAAGATAAAAGTTGCAGTTTCTGTG 57.008 32.000 0.00 0.00 33.43 3.66
5638 6354 8.135529 GGTAAAGATAAAAGTTGCAGTTTCTGT 58.864 33.333 0.00 0.00 33.43 3.41
5639 6355 8.352942 AGGTAAAGATAAAAGTTGCAGTTTCTG 58.647 33.333 0.00 0.00 34.12 3.02
5640 6356 8.465273 AGGTAAAGATAAAAGTTGCAGTTTCT 57.535 30.769 0.00 0.00 0.00 2.52
5641 6357 9.529325 AAAGGTAAAGATAAAAGTTGCAGTTTC 57.471 29.630 0.00 0.00 0.00 2.78
5642 6358 9.884636 AAAAGGTAAAGATAAAAGTTGCAGTTT 57.115 25.926 0.00 0.00 0.00 2.66
5643 6359 9.529325 GAAAAGGTAAAGATAAAAGTTGCAGTT 57.471 29.630 0.00 0.00 0.00 3.16
5644 6360 8.691797 TGAAAAGGTAAAGATAAAAGTTGCAGT 58.308 29.630 0.00 0.00 0.00 4.40
5645 6361 9.185192 CTGAAAAGGTAAAGATAAAAGTTGCAG 57.815 33.333 0.00 0.00 0.00 4.41
5646 6362 8.691797 ACTGAAAAGGTAAAGATAAAAGTTGCA 58.308 29.630 0.00 0.00 0.00 4.08
5647 6363 9.529325 AACTGAAAAGGTAAAGATAAAAGTTGC 57.471 29.630 0.00 0.00 0.00 4.17
5656 6372 9.967346 GCTAAAAGAAACTGAAAAGGTAAAGAT 57.033 29.630 0.00 0.00 0.00 2.40
5657 6373 9.185680 AGCTAAAAGAAACTGAAAAGGTAAAGA 57.814 29.630 0.00 0.00 0.00 2.52
5662 6378 9.967346 GATTTAGCTAAAAGAAACTGAAAAGGT 57.033 29.630 22.13 0.48 0.00 3.50
5663 6379 9.411801 GGATTTAGCTAAAAGAAACTGAAAAGG 57.588 33.333 22.13 0.00 0.00 3.11
5664 6380 9.965824 TGGATTTAGCTAAAAGAAACTGAAAAG 57.034 29.630 22.13 0.00 0.00 2.27
5665 6381 9.965824 CTGGATTTAGCTAAAAGAAACTGAAAA 57.034 29.630 22.13 0.00 0.00 2.29
5666 6382 9.349713 TCTGGATTTAGCTAAAAGAAACTGAAA 57.650 29.630 22.13 0.00 0.00 2.69
5667 6383 8.918202 TCTGGATTTAGCTAAAAGAAACTGAA 57.082 30.769 22.13 0.00 0.00 3.02
5668 6384 8.918202 TTCTGGATTTAGCTAAAAGAAACTGA 57.082 30.769 22.13 15.19 0.00 3.41
5669 6385 9.399403 GTTTCTGGATTTAGCTAAAAGAAACTG 57.601 33.333 35.71 23.35 41.52 3.16
5670 6386 9.131791 TGTTTCTGGATTTAGCTAAAAGAAACT 57.868 29.630 38.14 22.49 43.05 2.66
5671 6387 9.181805 GTGTTTCTGGATTTAGCTAAAAGAAAC 57.818 33.333 35.99 35.99 43.00 2.78
5672 6388 9.131791 AGTGTTTCTGGATTTAGCTAAAAGAAA 57.868 29.630 26.29 26.29 31.96 2.52
5673 6389 8.567948 CAGTGTTTCTGGATTTAGCTAAAAGAA 58.432 33.333 22.13 21.14 40.23 2.52
5674 6390 7.308589 GCAGTGTTTCTGGATTTAGCTAAAAGA 60.309 37.037 22.13 16.98 43.78 2.52
5675 6391 6.803807 GCAGTGTTTCTGGATTTAGCTAAAAG 59.196 38.462 22.13 15.07 43.78 2.27
5676 6392 6.294508 GGCAGTGTTTCTGGATTTAGCTAAAA 60.295 38.462 22.13 5.99 43.78 1.52
5677 6393 5.183140 GGCAGTGTTTCTGGATTTAGCTAAA 59.817 40.000 20.71 20.71 43.78 1.85
5678 6394 4.700213 GGCAGTGTTTCTGGATTTAGCTAA 59.300 41.667 0.86 0.86 43.78 3.09
5679 6395 4.261801 GGCAGTGTTTCTGGATTTAGCTA 58.738 43.478 0.00 0.00 43.78 3.32
5680 6396 3.084786 GGCAGTGTTTCTGGATTTAGCT 58.915 45.455 0.00 0.00 43.78 3.32
5681 6397 2.819608 TGGCAGTGTTTCTGGATTTAGC 59.180 45.455 0.00 0.00 43.78 3.09
5682 6398 4.074970 AGTGGCAGTGTTTCTGGATTTAG 58.925 43.478 0.00 0.00 43.78 1.85
5683 6399 4.098914 AGTGGCAGTGTTTCTGGATTTA 57.901 40.909 0.00 0.00 43.78 1.40
5684 6400 2.949447 AGTGGCAGTGTTTCTGGATTT 58.051 42.857 0.00 0.00 43.78 2.17
5685 6401 2.664402 AGTGGCAGTGTTTCTGGATT 57.336 45.000 0.00 0.00 43.78 3.01
5686 6402 2.664402 AAGTGGCAGTGTTTCTGGAT 57.336 45.000 0.00 0.00 43.78 3.41
5687 6403 2.435372 AAAGTGGCAGTGTTTCTGGA 57.565 45.000 0.00 0.00 43.78 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.