Multiple sequence alignment - TraesCS2A01G284000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G284000 chr2A 100.000 2408 0 0 1 2408 476215239 476212832 0.000000e+00 4447.0
1 TraesCS2A01G284000 chr2A 94.920 374 19 0 974 1347 476212083 476212456 9.590000e-164 586.0
2 TraesCS2A01G284000 chr2A 89.787 235 24 0 739 973 476211798 476212032 3.890000e-78 302.0
3 TraesCS2A01G284000 chr1D 95.130 575 25 2 1334 1906 344591596 344592169 0.000000e+00 904.0
4 TraesCS2A01G284000 chr1D 97.531 324 8 0 989 1312 344590616 344590939 2.700000e-154 555.0
5 TraesCS2A01G284000 chr1D 91.343 335 14 9 1990 2321 344592150 344592472 6.110000e-121 444.0
6 TraesCS2A01G284000 chr1D 88.732 213 21 3 1 212 332943974 332944184 8.540000e-65 257.0
7 TraesCS2A01G284000 chr1B 93.486 568 34 3 1342 1906 466093289 466092722 0.000000e+00 841.0
8 TraesCS2A01G284000 chr1B 97.531 324 8 0 989 1312 466094279 466093956 2.700000e-154 555.0
9 TraesCS2A01G284000 chr1B 93.787 338 21 0 975 1312 682437238 682437575 2.140000e-140 508.0
10 TraesCS2A01G284000 chr1B 90.078 383 27 4 1990 2370 466092741 466092368 1.000000e-133 486.0
11 TraesCS2A01G284000 chr1B 90.223 358 25 5 1334 1686 682438231 682438583 2.180000e-125 459.0
12 TraesCS2A01G284000 chr1B 97.143 35 1 0 1898 1932 466092792 466092758 2.590000e-05 60.2
13 TraesCS2A01G284000 chr7B 88.545 550 43 10 739 1283 221893484 221892950 0.000000e+00 649.0
14 TraesCS2A01G284000 chr7B 85.000 560 52 21 736 1291 29686843 29687374 7.570000e-150 540.0
15 TraesCS2A01G284000 chr2B 88.321 548 45 10 739 1283 113193072 113193603 7.260000e-180 640.0
16 TraesCS2A01G284000 chr2B 90.133 375 30 4 213 582 423823006 423822634 4.660000e-132 481.0
17 TraesCS2A01G284000 chr2B 87.288 236 27 3 739 973 113195974 113195741 1.420000e-67 267.0
18 TraesCS2A01G284000 chr3B 87.034 563 53 11 726 1283 492742121 492742668 3.400000e-173 617.0
19 TraesCS2A01G284000 chr3B 86.314 548 54 11 741 1283 622479002 622479533 5.770000e-161 577.0
20 TraesCS2A01G284000 chr3B 87.342 237 27 3 739 973 492745053 492744818 3.950000e-68 268.0
21 TraesCS2A01G284000 chr1A 97.531 324 8 0 989 1312 444122378 444122701 2.700000e-154 555.0
22 TraesCS2A01G284000 chr1A 92.742 248 13 2 1334 1576 444123358 444123605 1.060000e-93 353.0
23 TraesCS2A01G284000 chr1A 88.679 212 24 0 1 212 387860130 387860341 2.370000e-65 259.0
24 TraesCS2A01G284000 chr1A 84.188 234 20 1 1575 1808 444123709 444123925 6.740000e-51 211.0
25 TraesCS2A01G284000 chr3D 88.194 432 24 17 884 1312 284207026 284206619 7.740000e-135 490.0
26 TraesCS2A01G284000 chr3D 87.793 213 26 0 1 213 231733292 231733504 1.430000e-62 250.0
27 TraesCS2A01G284000 chr3D 87.558 217 26 1 1 217 363607560 363607775 1.430000e-62 250.0
28 TraesCS2A01G284000 chr3D 87.619 210 26 0 4 213 456985671 456985462 6.650000e-61 244.0
29 TraesCS2A01G284000 chr2D 93.171 205 12 1 373 575 355927759 355927555 1.400000e-77 300.0
30 TraesCS2A01G284000 chr2D 85.903 227 31 1 739 964 460567853 460567627 8.600000e-60 241.0
31 TraesCS2A01G284000 chr2D 91.045 134 9 2 186 316 355928035 355927902 6.840000e-41 178.0
32 TraesCS2A01G284000 chr7D 87.391 230 29 0 739 968 430991143 430991372 5.100000e-67 265.0
33 TraesCS2A01G284000 chr7D 88.679 212 22 2 1 210 153294093 153294304 8.540000e-65 257.0
34 TraesCS2A01G284000 chr6D 89.048 210 21 2 4 212 121816567 121816359 2.370000e-65 259.0
35 TraesCS2A01G284000 chr5D 88.571 210 24 0 4 213 520917691 520917482 3.070000e-64 255.0
36 TraesCS2A01G284000 chr5D 88.372 215 22 3 1 214 557635195 557635407 3.070000e-64 255.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G284000 chr2A 476212832 476215239 2407 True 4447.000000 4447 100.0000 1 2408 1 chr2A.!!$R1 2407
1 TraesCS2A01G284000 chr2A 476211798 476212456 658 False 444.000000 586 92.3535 739 1347 2 chr2A.!!$F1 608
2 TraesCS2A01G284000 chr1D 344590616 344592472 1856 False 634.333333 904 94.6680 989 2321 3 chr1D.!!$F2 1332
3 TraesCS2A01G284000 chr1B 466092368 466094279 1911 True 485.550000 841 94.5595 989 2370 4 chr1B.!!$R1 1381
4 TraesCS2A01G284000 chr1B 682437238 682438583 1345 False 483.500000 508 92.0050 975 1686 2 chr1B.!!$F1 711
5 TraesCS2A01G284000 chr7B 221892950 221893484 534 True 649.000000 649 88.5450 739 1283 1 chr7B.!!$R1 544
6 TraesCS2A01G284000 chr7B 29686843 29687374 531 False 540.000000 540 85.0000 736 1291 1 chr7B.!!$F1 555
7 TraesCS2A01G284000 chr2B 113193072 113193603 531 False 640.000000 640 88.3210 739 1283 1 chr2B.!!$F1 544
8 TraesCS2A01G284000 chr3B 492742121 492742668 547 False 617.000000 617 87.0340 726 1283 1 chr3B.!!$F1 557
9 TraesCS2A01G284000 chr3B 622479002 622479533 531 False 577.000000 577 86.3140 741 1283 1 chr3B.!!$F2 542
10 TraesCS2A01G284000 chr1A 444122378 444123925 1547 False 373.000000 555 91.4870 989 1808 3 chr1A.!!$F2 819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
328 329 0.030908 CCTGATTCTACGTCTCGCCC 59.969 60.0 0.00 0.00 0.00 6.13 F
609 610 0.033504 GAGAATCGGAGCCGGCAATA 59.966 55.0 31.54 11.53 40.25 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1339 1849 0.773644 AGAGCATGTGAACCCCTTGT 59.226 50.000 0.0 0.0 0.00 3.16 R
2116 2930 1.406539 CAGGTGGCATTAACATGAGGC 59.593 52.381 0.0 0.0 31.11 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.702494 TGTTATTTGACAATATGTTTGAATGCA 57.298 25.926 0.00 0.00 0.00 3.96
38 39 8.828688 TTGACAATATGTTTGAATGCAAATCA 57.171 26.923 1.18 3.25 45.01 2.57
39 40 8.828688 TGACAATATGTTTGAATGCAAATCAA 57.171 26.923 12.72 12.72 45.01 2.57
40 41 9.438228 TGACAATATGTTTGAATGCAAATCAAT 57.562 25.926 16.26 7.11 45.01 2.57
41 42 9.697250 GACAATATGTTTGAATGCAAATCAATG 57.303 29.630 16.26 13.10 45.01 2.82
42 43 9.221933 ACAATATGTTTGAATGCAAATCAATGT 57.778 25.926 16.26 13.59 45.01 2.71
54 55 7.682593 TGCAAATCAATGTAAATATTGAGCG 57.317 32.000 7.95 1.57 46.70 5.03
55 56 6.696583 TGCAAATCAATGTAAATATTGAGCGG 59.303 34.615 7.95 2.17 46.70 5.52
56 57 6.346040 GCAAATCAATGTAAATATTGAGCGGC 60.346 38.462 7.95 0.00 46.70 6.53
57 58 4.829064 TCAATGTAAATATTGAGCGGCC 57.171 40.909 0.00 0.00 40.95 6.13
58 59 4.203226 TCAATGTAAATATTGAGCGGCCA 58.797 39.130 2.24 0.00 40.95 5.36
59 60 4.275689 TCAATGTAAATATTGAGCGGCCAG 59.724 41.667 2.24 0.00 40.95 4.85
60 61 7.221226 TCAATGTAAATATTGAGCGGCCAGC 62.221 44.000 2.24 7.61 40.95 4.85
81 82 2.421314 CCTCGCCGGCACATATGA 59.579 61.111 28.98 13.43 0.00 2.15
82 83 1.665916 CCTCGCCGGCACATATGAG 60.666 63.158 28.98 22.05 0.00 2.90
83 84 1.068083 CTCGCCGGCACATATGAGT 59.932 57.895 28.98 0.00 0.00 3.41
84 85 0.941463 CTCGCCGGCACATATGAGTC 60.941 60.000 28.98 1.48 0.00 3.36
85 86 1.227234 CGCCGGCACATATGAGTCA 60.227 57.895 28.98 0.00 0.00 3.41
86 87 1.217585 CGCCGGCACATATGAGTCAG 61.218 60.000 28.98 0.12 0.00 3.51
87 88 1.502163 GCCGGCACATATGAGTCAGC 61.502 60.000 24.80 3.13 0.00 4.26
88 89 0.179076 CCGGCACATATGAGTCAGCA 60.179 55.000 10.38 0.00 0.00 4.41
89 90 0.933097 CGGCACATATGAGTCAGCAC 59.067 55.000 10.38 0.14 0.00 4.40
90 91 1.740043 CGGCACATATGAGTCAGCACA 60.740 52.381 10.38 0.00 0.00 4.57
91 92 2.358957 GGCACATATGAGTCAGCACAA 58.641 47.619 10.38 0.00 0.00 3.33
92 93 2.947652 GGCACATATGAGTCAGCACAAT 59.052 45.455 10.38 0.00 0.00 2.71
93 94 3.379372 GGCACATATGAGTCAGCACAATT 59.621 43.478 10.38 0.00 0.00 2.32
94 95 4.348656 GCACATATGAGTCAGCACAATTG 58.651 43.478 10.38 3.24 0.00 2.32
95 96 4.732647 GCACATATGAGTCAGCACAATTGG 60.733 45.833 10.38 0.00 0.00 3.16
96 97 3.379372 ACATATGAGTCAGCACAATTGGC 59.621 43.478 10.38 10.34 0.00 4.52
97 98 1.913778 ATGAGTCAGCACAATTGGCA 58.086 45.000 17.54 0.00 0.00 4.92
98 99 0.953727 TGAGTCAGCACAATTGGCAC 59.046 50.000 17.54 10.04 0.00 5.01
99 100 0.110056 GAGTCAGCACAATTGGCACG 60.110 55.000 17.54 10.26 0.00 5.34
100 101 1.730547 GTCAGCACAATTGGCACGC 60.731 57.895 17.54 11.10 0.00 5.34
101 102 1.898094 TCAGCACAATTGGCACGCT 60.898 52.632 17.54 12.84 0.00 5.07
102 103 0.605050 TCAGCACAATTGGCACGCTA 60.605 50.000 17.54 4.90 0.00 4.26
103 104 0.454957 CAGCACAATTGGCACGCTAC 60.455 55.000 17.54 0.00 0.00 3.58
104 105 1.154035 GCACAATTGGCACGCTACC 60.154 57.895 10.83 0.00 0.00 3.18
105 106 1.134487 CACAATTGGCACGCTACCG 59.866 57.895 10.83 0.00 41.14 4.02
106 107 1.004320 ACAATTGGCACGCTACCGA 60.004 52.632 10.83 0.00 38.29 4.69
107 108 0.392461 ACAATTGGCACGCTACCGAT 60.392 50.000 10.83 0.00 38.29 4.18
108 109 0.304705 CAATTGGCACGCTACCGATC 59.695 55.000 0.00 0.00 38.29 3.69
109 110 0.814010 AATTGGCACGCTACCGATCC 60.814 55.000 0.00 0.00 38.29 3.36
110 111 1.966901 ATTGGCACGCTACCGATCCA 61.967 55.000 0.00 0.00 37.50 3.41
111 112 2.173758 TTGGCACGCTACCGATCCAA 62.174 55.000 0.00 8.70 42.29 3.53
112 113 1.448893 GGCACGCTACCGATCCAAA 60.449 57.895 0.00 0.00 38.29 3.28
113 114 0.814010 GGCACGCTACCGATCCAAAT 60.814 55.000 0.00 0.00 38.29 2.32
114 115 0.582005 GCACGCTACCGATCCAAATC 59.418 55.000 0.00 0.00 38.29 2.17
115 116 1.806623 GCACGCTACCGATCCAAATCT 60.807 52.381 0.00 0.00 38.29 2.40
116 117 2.545113 GCACGCTACCGATCCAAATCTA 60.545 50.000 0.00 0.00 38.29 1.98
117 118 3.713288 CACGCTACCGATCCAAATCTAA 58.287 45.455 0.00 0.00 38.29 2.10
118 119 4.116961 CACGCTACCGATCCAAATCTAAA 58.883 43.478 0.00 0.00 38.29 1.85
119 120 4.569162 CACGCTACCGATCCAAATCTAAAA 59.431 41.667 0.00 0.00 38.29 1.52
120 121 4.809426 ACGCTACCGATCCAAATCTAAAAG 59.191 41.667 0.00 0.00 38.29 2.27
121 122 5.047847 CGCTACCGATCCAAATCTAAAAGA 58.952 41.667 0.00 0.00 36.29 2.52
122 123 5.175856 CGCTACCGATCCAAATCTAAAAGAG 59.824 44.000 0.00 0.00 36.29 2.85
123 124 5.467063 GCTACCGATCCAAATCTAAAAGAGG 59.533 44.000 0.00 0.00 0.00 3.69
124 125 5.693769 ACCGATCCAAATCTAAAAGAGGA 57.306 39.130 0.00 0.00 0.00 3.71
125 126 5.429130 ACCGATCCAAATCTAAAAGAGGAC 58.571 41.667 0.00 0.00 0.00 3.85
126 127 4.508124 CCGATCCAAATCTAAAAGAGGACG 59.492 45.833 0.00 0.00 0.00 4.79
127 128 4.508124 CGATCCAAATCTAAAAGAGGACGG 59.492 45.833 0.00 0.00 0.00 4.79
128 129 5.671493 GATCCAAATCTAAAAGAGGACGGA 58.329 41.667 0.00 0.00 0.00 4.69
129 130 4.828829 TCCAAATCTAAAAGAGGACGGAC 58.171 43.478 0.00 0.00 0.00 4.79
130 131 3.617263 CCAAATCTAAAAGAGGACGGACG 59.383 47.826 0.00 0.00 0.00 4.79
131 132 2.580966 ATCTAAAAGAGGACGGACGC 57.419 50.000 0.00 0.00 0.00 5.19
132 133 1.250328 TCTAAAAGAGGACGGACGCA 58.750 50.000 0.00 0.00 0.00 5.24
133 134 1.201647 TCTAAAAGAGGACGGACGCAG 59.798 52.381 0.00 0.00 0.00 5.18
134 135 0.245539 TAAAAGAGGACGGACGCAGG 59.754 55.000 0.00 0.00 0.00 4.85
135 136 2.450479 AAAAGAGGACGGACGCAGGG 62.450 60.000 0.00 0.00 0.00 4.45
153 154 3.047877 CAGGCGACCGACCCAAAC 61.048 66.667 0.00 0.00 0.00 2.93
154 155 3.552384 AGGCGACCGACCCAAACA 61.552 61.111 0.00 0.00 0.00 2.83
155 156 3.047877 GGCGACCGACCCAAACAG 61.048 66.667 0.00 0.00 0.00 3.16
156 157 2.029964 GCGACCGACCCAAACAGA 59.970 61.111 0.00 0.00 0.00 3.41
157 158 1.375523 GCGACCGACCCAAACAGAT 60.376 57.895 0.00 0.00 0.00 2.90
158 159 0.108520 GCGACCGACCCAAACAGATA 60.109 55.000 0.00 0.00 0.00 1.98
159 160 1.673626 GCGACCGACCCAAACAGATAA 60.674 52.381 0.00 0.00 0.00 1.75
160 161 2.690786 CGACCGACCCAAACAGATAAA 58.309 47.619 0.00 0.00 0.00 1.40
161 162 3.068560 CGACCGACCCAAACAGATAAAA 58.931 45.455 0.00 0.00 0.00 1.52
162 163 3.499157 CGACCGACCCAAACAGATAAAAA 59.501 43.478 0.00 0.00 0.00 1.94
178 179 2.309898 AAAAACAGACGAAATCGCCG 57.690 45.000 2.15 0.00 44.43 6.46
179 180 1.223187 AAAACAGACGAAATCGCCGT 58.777 45.000 2.15 0.00 44.43 5.68
184 185 4.609995 ACGAAATCGCCGTCCATT 57.390 50.000 2.15 0.00 44.43 3.16
185 186 2.849081 ACGAAATCGCCGTCCATTT 58.151 47.368 2.15 0.00 44.43 2.32
186 187 0.446222 ACGAAATCGCCGTCCATTTG 59.554 50.000 2.15 0.00 44.43 2.32
187 188 0.248054 CGAAATCGCCGTCCATTTGG 60.248 55.000 0.00 0.00 0.00 3.28
188 189 1.091537 GAAATCGCCGTCCATTTGGA 58.908 50.000 0.00 0.00 43.08 3.53
197 198 2.292866 TCCATTTGGATCGACCCGT 58.707 52.632 0.00 0.00 39.78 5.28
198 199 0.616371 TCCATTTGGATCGACCCGTT 59.384 50.000 0.00 0.00 39.78 4.44
199 200 0.732571 CCATTTGGATCGACCCGTTG 59.267 55.000 0.00 0.00 37.39 4.10
200 201 0.732571 CATTTGGATCGACCCGTTGG 59.267 55.000 0.00 0.00 38.00 3.77
201 202 0.616371 ATTTGGATCGACCCGTTGGA 59.384 50.000 0.00 0.00 38.00 3.53
202 203 0.036765 TTTGGATCGACCCGTTGGAG 60.037 55.000 0.00 0.00 38.00 3.86
203 204 1.189524 TTGGATCGACCCGTTGGAGT 61.190 55.000 0.00 0.00 38.00 3.85
204 205 1.189524 TGGATCGACCCGTTGGAGTT 61.190 55.000 0.00 0.00 38.00 3.01
205 206 0.739813 GGATCGACCCGTTGGAGTTG 60.740 60.000 0.00 0.00 34.81 3.16
206 207 1.359459 GATCGACCCGTTGGAGTTGC 61.359 60.000 0.00 0.00 34.81 4.17
207 208 1.827399 ATCGACCCGTTGGAGTTGCT 61.827 55.000 0.00 0.00 34.81 3.91
208 209 2.027625 CGACCCGTTGGAGTTGCTC 61.028 63.158 0.00 0.00 34.81 4.26
209 210 1.371558 GACCCGTTGGAGTTGCTCT 59.628 57.895 0.00 0.00 34.81 4.09
210 211 0.606604 GACCCGTTGGAGTTGCTCTA 59.393 55.000 0.00 0.00 34.81 2.43
211 212 1.001633 GACCCGTTGGAGTTGCTCTAA 59.998 52.381 0.00 0.00 34.81 2.10
212 213 1.002087 ACCCGTTGGAGTTGCTCTAAG 59.998 52.381 0.00 0.00 31.92 2.18
213 214 1.079503 CCGTTGGAGTTGCTCTAAGC 58.920 55.000 0.00 0.00 42.82 3.09
214 215 1.338200 CCGTTGGAGTTGCTCTAAGCT 60.338 52.381 0.11 0.00 42.97 3.74
215 216 2.417719 CGTTGGAGTTGCTCTAAGCTT 58.582 47.619 3.48 3.48 42.97 3.74
216 217 2.413453 CGTTGGAGTTGCTCTAAGCTTC 59.587 50.000 0.00 0.00 42.97 3.86
217 218 2.744741 GTTGGAGTTGCTCTAAGCTTCC 59.255 50.000 0.00 0.00 42.97 3.46
218 219 1.066858 TGGAGTTGCTCTAAGCTTCCG 60.067 52.381 0.00 0.00 42.97 4.30
219 220 1.066787 GGAGTTGCTCTAAGCTTCCGT 60.067 52.381 0.00 0.00 42.97 4.69
220 221 2.613223 GGAGTTGCTCTAAGCTTCCGTT 60.613 50.000 0.00 0.00 42.97 4.44
221 222 2.413453 GAGTTGCTCTAAGCTTCCGTTG 59.587 50.000 0.00 0.00 42.97 4.10
222 223 1.135944 GTTGCTCTAAGCTTCCGTTGC 60.136 52.381 0.00 2.53 42.97 4.17
223 224 0.673644 TGCTCTAAGCTTCCGTTGCC 60.674 55.000 0.00 0.00 42.97 4.52
224 225 1.369839 GCTCTAAGCTTCCGTTGCCC 61.370 60.000 0.00 0.00 38.45 5.36
225 226 0.744771 CTCTAAGCTTCCGTTGCCCC 60.745 60.000 0.00 0.00 0.00 5.80
226 227 2.046700 TAAGCTTCCGTTGCCCCG 60.047 61.111 0.00 0.00 0.00 5.73
234 235 2.897207 CGTTGCCCCGGACAGATA 59.103 61.111 0.73 0.00 0.00 1.98
235 236 1.445942 CGTTGCCCCGGACAGATAT 59.554 57.895 0.73 0.00 0.00 1.63
236 237 0.179056 CGTTGCCCCGGACAGATATT 60.179 55.000 0.73 0.00 0.00 1.28
237 238 1.745827 CGTTGCCCCGGACAGATATTT 60.746 52.381 0.73 0.00 0.00 1.40
238 239 2.375146 GTTGCCCCGGACAGATATTTT 58.625 47.619 0.73 0.00 0.00 1.82
239 240 2.341846 TGCCCCGGACAGATATTTTC 57.658 50.000 0.73 0.00 0.00 2.29
240 241 1.133915 TGCCCCGGACAGATATTTTCC 60.134 52.381 0.73 0.00 0.00 3.13
241 242 1.143073 GCCCCGGACAGATATTTTCCT 59.857 52.381 0.73 0.00 0.00 3.36
242 243 2.422945 GCCCCGGACAGATATTTTCCTT 60.423 50.000 0.73 0.00 0.00 3.36
243 244 3.214328 CCCCGGACAGATATTTTCCTTG 58.786 50.000 0.73 0.00 0.00 3.61
244 245 3.118038 CCCCGGACAGATATTTTCCTTGA 60.118 47.826 0.73 0.00 0.00 3.02
245 246 4.523083 CCCGGACAGATATTTTCCTTGAA 58.477 43.478 0.73 0.00 0.00 2.69
246 247 4.335594 CCCGGACAGATATTTTCCTTGAAC 59.664 45.833 0.73 0.00 0.00 3.18
247 248 5.186198 CCGGACAGATATTTTCCTTGAACT 58.814 41.667 0.00 0.00 0.00 3.01
248 249 5.065218 CCGGACAGATATTTTCCTTGAACTG 59.935 44.000 0.00 0.00 0.00 3.16
249 250 5.447818 CGGACAGATATTTTCCTTGAACTGC 60.448 44.000 0.00 0.00 0.00 4.40
250 251 5.649831 GGACAGATATTTTCCTTGAACTGCT 59.350 40.000 0.00 0.00 0.00 4.24
251 252 6.151817 GGACAGATATTTTCCTTGAACTGCTT 59.848 38.462 0.00 0.00 0.00 3.91
252 253 7.150783 ACAGATATTTTCCTTGAACTGCTTC 57.849 36.000 0.00 0.00 0.00 3.86
253 254 6.716628 ACAGATATTTTCCTTGAACTGCTTCA 59.283 34.615 0.00 0.00 34.39 3.02
254 255 7.395489 ACAGATATTTTCCTTGAACTGCTTCAT 59.605 33.333 0.00 0.00 36.26 2.57
255 256 8.248945 CAGATATTTTCCTTGAACTGCTTCATT 58.751 33.333 0.00 0.00 36.26 2.57
256 257 8.465201 AGATATTTTCCTTGAACTGCTTCATTC 58.535 33.333 0.00 0.00 36.26 2.67
257 258 5.850557 TTTTCCTTGAACTGCTTCATTCA 57.149 34.783 0.00 0.00 36.26 2.57
258 259 5.443185 TTTCCTTGAACTGCTTCATTCAG 57.557 39.130 0.00 0.00 36.26 3.02
259 260 3.415212 TCCTTGAACTGCTTCATTCAGG 58.585 45.455 0.52 0.52 36.26 3.86
260 261 2.094854 CCTTGAACTGCTTCATTCAGGC 60.095 50.000 0.00 0.00 36.26 4.85
261 262 2.275134 TGAACTGCTTCATTCAGGCA 57.725 45.000 0.00 0.00 35.94 4.75
264 265 2.869636 CTGCTTCATTCAGGCAGCT 58.130 52.632 0.00 0.00 45.04 4.24
265 266 0.452184 CTGCTTCATTCAGGCAGCTG 59.548 55.000 10.11 10.11 45.04 4.24
266 267 0.251033 TGCTTCATTCAGGCAGCTGT 60.251 50.000 16.64 0.00 33.15 4.40
267 268 0.450983 GCTTCATTCAGGCAGCTGTC 59.549 55.000 11.28 11.28 0.00 3.51
268 269 1.093159 CTTCATTCAGGCAGCTGTCC 58.907 55.000 16.31 16.49 0.00 4.02
269 270 0.322816 TTCATTCAGGCAGCTGTCCC 60.323 55.000 16.31 8.64 0.00 4.46
270 271 1.001764 CATTCAGGCAGCTGTCCCA 60.002 57.895 16.31 0.00 0.00 4.37
271 272 0.395311 CATTCAGGCAGCTGTCCCAT 60.395 55.000 16.31 1.21 0.00 4.00
272 273 0.333993 ATTCAGGCAGCTGTCCCATT 59.666 50.000 16.31 0.00 0.00 3.16
273 274 0.609957 TTCAGGCAGCTGTCCCATTG 60.610 55.000 16.31 6.84 0.00 2.82
274 275 1.001764 CAGGCAGCTGTCCCATTGA 60.002 57.895 16.31 0.00 0.00 2.57
275 276 0.609957 CAGGCAGCTGTCCCATTGAA 60.610 55.000 16.31 0.00 0.00 2.69
276 277 0.333993 AGGCAGCTGTCCCATTGAAT 59.666 50.000 16.31 0.00 0.00 2.57
277 278 1.188863 GGCAGCTGTCCCATTGAATT 58.811 50.000 16.64 0.00 0.00 2.17
278 279 1.134907 GGCAGCTGTCCCATTGAATTG 60.135 52.381 16.64 0.00 0.00 2.32
279 280 1.738030 GCAGCTGTCCCATTGAATTGC 60.738 52.381 16.64 0.00 0.00 3.56
280 281 1.546923 CAGCTGTCCCATTGAATTGCA 59.453 47.619 5.25 0.00 0.00 4.08
281 282 2.028839 CAGCTGTCCCATTGAATTGCAA 60.029 45.455 5.25 0.00 41.53 4.08
282 283 2.633967 AGCTGTCCCATTGAATTGCAAA 59.366 40.909 1.71 0.00 40.48 3.68
283 284 2.997986 GCTGTCCCATTGAATTGCAAAG 59.002 45.455 1.71 0.00 40.48 2.77
284 285 3.592059 CTGTCCCATTGAATTGCAAAGG 58.408 45.455 1.71 0.00 43.34 3.11
285 286 2.289569 TGTCCCATTGAATTGCAAAGGC 60.290 45.455 1.71 0.00 42.58 4.35
296 297 2.676744 GCAAAGGCACAAACACACC 58.323 52.632 0.00 0.00 40.72 4.16
297 298 1.145162 GCAAAGGCACAAACACACCG 61.145 55.000 0.00 0.00 40.72 4.94
298 299 1.140804 AAAGGCACAAACACACCGC 59.859 52.632 0.00 0.00 0.00 5.68
299 300 1.319614 AAAGGCACAAACACACCGCT 61.320 50.000 0.00 0.00 0.00 5.52
300 301 2.003658 AAGGCACAAACACACCGCTG 62.004 55.000 0.00 0.00 0.00 5.18
301 302 2.655044 GCACAAACACACCGCTGC 60.655 61.111 0.00 0.00 0.00 5.25
302 303 2.026014 CACAAACACACCGCTGCC 59.974 61.111 0.00 0.00 0.00 4.85
303 304 3.582120 ACAAACACACCGCTGCCG 61.582 61.111 0.00 0.00 0.00 5.69
315 316 4.845580 CTGCCGGCTCGCCTGATT 62.846 66.667 29.70 0.00 0.00 2.57
316 317 4.838152 TGCCGGCTCGCCTGATTC 62.838 66.667 29.70 0.00 0.00 2.52
317 318 4.537433 GCCGGCTCGCCTGATTCT 62.537 66.667 22.15 0.00 0.00 2.40
318 319 3.129300 CCGGCTCGCCTGATTCTA 58.871 61.111 6.35 0.00 0.00 2.10
319 320 1.300233 CCGGCTCGCCTGATTCTAC 60.300 63.158 6.35 0.00 0.00 2.59
320 321 1.658717 CGGCTCGCCTGATTCTACG 60.659 63.158 6.35 0.00 0.00 3.51
321 322 1.437986 GGCTCGCCTGATTCTACGT 59.562 57.895 0.00 0.00 0.00 3.57
322 323 0.595310 GGCTCGCCTGATTCTACGTC 60.595 60.000 0.00 0.00 0.00 4.34
323 324 0.382515 GCTCGCCTGATTCTACGTCT 59.617 55.000 0.00 0.00 0.00 4.18
324 325 1.598430 GCTCGCCTGATTCTACGTCTC 60.598 57.143 0.00 0.00 0.00 3.36
325 326 0.656259 TCGCCTGATTCTACGTCTCG 59.344 55.000 0.00 0.00 0.00 4.04
326 327 0.930742 CGCCTGATTCTACGTCTCGC 60.931 60.000 0.00 0.00 0.00 5.03
327 328 0.595310 GCCTGATTCTACGTCTCGCC 60.595 60.000 0.00 0.00 0.00 5.54
328 329 0.030908 CCTGATTCTACGTCTCGCCC 59.969 60.000 0.00 0.00 0.00 6.13
329 330 0.738975 CTGATTCTACGTCTCGCCCA 59.261 55.000 0.00 0.00 0.00 5.36
330 331 1.134367 CTGATTCTACGTCTCGCCCAA 59.866 52.381 0.00 0.00 0.00 4.12
331 332 1.546923 TGATTCTACGTCTCGCCCAAA 59.453 47.619 0.00 0.00 0.00 3.28
332 333 2.028839 TGATTCTACGTCTCGCCCAAAA 60.029 45.455 0.00 0.00 0.00 2.44
333 334 2.074547 TTCTACGTCTCGCCCAAAAG 57.925 50.000 0.00 0.00 0.00 2.27
334 335 0.389426 TCTACGTCTCGCCCAAAAGC 60.389 55.000 0.00 0.00 0.00 3.51
335 336 0.389948 CTACGTCTCGCCCAAAAGCT 60.390 55.000 0.00 0.00 0.00 3.74
336 337 0.889994 TACGTCTCGCCCAAAAGCTA 59.110 50.000 0.00 0.00 0.00 3.32
337 338 0.389948 ACGTCTCGCCCAAAAGCTAG 60.390 55.000 0.00 0.00 0.00 3.42
338 339 0.108804 CGTCTCGCCCAAAAGCTAGA 60.109 55.000 0.00 0.00 32.64 2.43
339 340 1.471676 CGTCTCGCCCAAAAGCTAGAT 60.472 52.381 0.00 0.00 36.99 1.98
340 341 2.633488 GTCTCGCCCAAAAGCTAGATT 58.367 47.619 0.00 0.00 36.99 2.40
341 342 3.010420 GTCTCGCCCAAAAGCTAGATTT 58.990 45.455 0.00 0.00 36.99 2.17
342 343 3.440522 GTCTCGCCCAAAAGCTAGATTTT 59.559 43.478 12.82 12.82 36.99 1.82
343 344 4.079253 TCTCGCCCAAAAGCTAGATTTTT 58.921 39.130 15.79 7.64 30.32 1.94
344 345 4.082787 TCTCGCCCAAAAGCTAGATTTTTG 60.083 41.667 15.79 17.51 42.38 2.44
345 346 2.667969 CGCCCAAAAGCTAGATTTTTGC 59.332 45.455 15.79 18.29 41.75 3.68
346 347 3.002791 GCCCAAAAGCTAGATTTTTGCC 58.997 45.455 15.79 0.00 41.75 4.52
347 348 3.306989 GCCCAAAAGCTAGATTTTTGCCT 60.307 43.478 15.79 0.00 41.75 4.75
348 349 4.803924 GCCCAAAAGCTAGATTTTTGCCTT 60.804 41.667 15.79 0.00 41.75 4.35
349 350 4.931601 CCCAAAAGCTAGATTTTTGCCTTC 59.068 41.667 15.79 0.00 41.75 3.46
350 351 4.931601 CCAAAAGCTAGATTTTTGCCTTCC 59.068 41.667 15.79 0.00 41.75 3.46
351 352 4.808414 AAAGCTAGATTTTTGCCTTCCC 57.192 40.909 0.00 0.00 0.00 3.97
352 353 2.739943 AGCTAGATTTTTGCCTTCCCC 58.260 47.619 0.00 0.00 0.00 4.81
353 354 1.405463 GCTAGATTTTTGCCTTCCCCG 59.595 52.381 0.00 0.00 0.00 5.73
354 355 2.024414 CTAGATTTTTGCCTTCCCCGG 58.976 52.381 0.00 0.00 0.00 5.73
362 363 3.979497 CCTTCCCCGGCCCTGTTT 61.979 66.667 0.00 0.00 0.00 2.83
363 364 2.361230 CTTCCCCGGCCCTGTTTC 60.361 66.667 0.00 0.00 0.00 2.78
364 365 2.856988 TTCCCCGGCCCTGTTTCT 60.857 61.111 0.00 0.00 0.00 2.52
365 366 2.426305 CTTCCCCGGCCCTGTTTCTT 62.426 60.000 0.00 0.00 0.00 2.52
366 367 2.014033 TTCCCCGGCCCTGTTTCTTT 62.014 55.000 0.00 0.00 0.00 2.52
367 368 1.977009 CCCCGGCCCTGTTTCTTTC 60.977 63.158 0.00 0.00 0.00 2.62
368 369 1.074951 CCCGGCCCTGTTTCTTTCT 59.925 57.895 0.00 0.00 0.00 2.52
369 370 0.326927 CCCGGCCCTGTTTCTTTCTA 59.673 55.000 0.00 0.00 0.00 2.10
370 371 1.450025 CCGGCCCTGTTTCTTTCTAC 58.550 55.000 0.00 0.00 0.00 2.59
371 372 1.450025 CGGCCCTGTTTCTTTCTACC 58.550 55.000 0.00 0.00 0.00 3.18
372 373 1.271163 CGGCCCTGTTTCTTTCTACCA 60.271 52.381 0.00 0.00 0.00 3.25
373 374 2.618045 CGGCCCTGTTTCTTTCTACCAT 60.618 50.000 0.00 0.00 0.00 3.55
374 375 3.431415 GGCCCTGTTTCTTTCTACCATT 58.569 45.455 0.00 0.00 0.00 3.16
375 376 3.193479 GGCCCTGTTTCTTTCTACCATTG 59.807 47.826 0.00 0.00 0.00 2.82
376 377 3.367395 GCCCTGTTTCTTTCTACCATTGC 60.367 47.826 0.00 0.00 0.00 3.56
377 378 3.193479 CCCTGTTTCTTTCTACCATTGCC 59.807 47.826 0.00 0.00 0.00 4.52
378 379 3.826157 CCTGTTTCTTTCTACCATTGCCA 59.174 43.478 0.00 0.00 0.00 4.92
379 380 4.463891 CCTGTTTCTTTCTACCATTGCCAT 59.536 41.667 0.00 0.00 0.00 4.40
380 381 5.389859 TGTTTCTTTCTACCATTGCCATG 57.610 39.130 0.00 0.00 0.00 3.66
381 382 4.176271 GTTTCTTTCTACCATTGCCATGC 58.824 43.478 0.00 0.00 0.00 4.06
382 383 3.084536 TCTTTCTACCATTGCCATGCA 57.915 42.857 0.00 0.00 36.47 3.96
383 384 3.634504 TCTTTCTACCATTGCCATGCAT 58.365 40.909 0.00 0.00 38.76 3.96
384 385 3.382227 TCTTTCTACCATTGCCATGCATG 59.618 43.478 20.19 20.19 38.76 4.06
385 386 1.034356 TCTACCATTGCCATGCATGC 58.966 50.000 21.69 11.82 38.76 4.06
386 387 0.318360 CTACCATTGCCATGCATGCG 60.318 55.000 21.69 15.04 38.76 4.73
387 388 2.352704 TACCATTGCCATGCATGCGC 62.353 55.000 24.69 24.69 38.76 6.09
388 389 2.964925 CATTGCCATGCATGCGCC 60.965 61.111 26.88 16.49 38.76 6.53
389 390 4.230002 ATTGCCATGCATGCGCCC 62.230 61.111 26.88 14.53 38.76 6.13
406 407 3.909662 CCGTCCAGGGCAGAAATG 58.090 61.111 0.00 0.00 35.97 2.32
407 408 1.299648 CCGTCCAGGGCAGAAATGA 59.700 57.895 0.00 0.00 35.97 2.57
408 409 0.107017 CCGTCCAGGGCAGAAATGAT 60.107 55.000 0.00 0.00 35.97 2.45
409 410 1.019673 CGTCCAGGGCAGAAATGATG 58.980 55.000 0.00 0.00 0.00 3.07
410 411 1.407299 CGTCCAGGGCAGAAATGATGA 60.407 52.381 0.00 0.00 0.00 2.92
411 412 2.747467 CGTCCAGGGCAGAAATGATGAT 60.747 50.000 0.00 0.00 0.00 2.45
412 413 2.621998 GTCCAGGGCAGAAATGATGATG 59.378 50.000 0.00 0.00 0.00 3.07
413 414 2.510800 TCCAGGGCAGAAATGATGATGA 59.489 45.455 0.00 0.00 0.00 2.92
414 415 2.621998 CCAGGGCAGAAATGATGATGAC 59.378 50.000 0.00 0.00 0.00 3.06
415 416 3.552875 CAGGGCAGAAATGATGATGACT 58.447 45.455 0.00 0.00 0.00 3.41
416 417 3.564644 CAGGGCAGAAATGATGATGACTC 59.435 47.826 0.00 0.00 0.00 3.36
417 418 2.547211 GGGCAGAAATGATGATGACTCG 59.453 50.000 0.00 0.00 0.00 4.18
418 419 3.201290 GGCAGAAATGATGATGACTCGT 58.799 45.455 0.00 0.00 0.00 4.18
419 420 3.624861 GGCAGAAATGATGATGACTCGTT 59.375 43.478 0.00 0.00 0.00 3.85
420 421 4.495349 GGCAGAAATGATGATGACTCGTTG 60.495 45.833 0.00 0.00 0.00 4.10
421 422 4.093998 GCAGAAATGATGATGACTCGTTGT 59.906 41.667 0.00 0.00 0.00 3.32
422 423 5.726138 GCAGAAATGATGATGACTCGTTGTC 60.726 44.000 4.78 4.78 45.54 3.18
430 431 2.070861 GACTCGTTGTCATGTCCGC 58.929 57.895 0.00 0.00 44.73 5.54
431 432 1.352156 GACTCGTTGTCATGTCCGCC 61.352 60.000 0.00 0.00 44.73 6.13
432 433 1.079819 CTCGTTGTCATGTCCGCCT 60.080 57.895 0.00 0.00 0.00 5.52
433 434 1.078759 CTCGTTGTCATGTCCGCCTC 61.079 60.000 0.00 0.00 0.00 4.70
434 435 1.374125 CGTTGTCATGTCCGCCTCA 60.374 57.895 0.00 0.00 0.00 3.86
435 436 0.740868 CGTTGTCATGTCCGCCTCAT 60.741 55.000 0.00 0.00 0.00 2.90
436 437 1.453155 GTTGTCATGTCCGCCTCATT 58.547 50.000 0.00 0.00 0.00 2.57
437 438 1.812571 GTTGTCATGTCCGCCTCATTT 59.187 47.619 0.00 0.00 0.00 2.32
438 439 1.737838 TGTCATGTCCGCCTCATTTC 58.262 50.000 0.00 0.00 0.00 2.17
439 440 1.017387 GTCATGTCCGCCTCATTTCC 58.983 55.000 0.00 0.00 0.00 3.13
440 441 0.107214 TCATGTCCGCCTCATTTCCC 60.107 55.000 0.00 0.00 0.00 3.97
441 442 0.394216 CATGTCCGCCTCATTTCCCA 60.394 55.000 0.00 0.00 0.00 4.37
442 443 0.394352 ATGTCCGCCTCATTTCCCAC 60.394 55.000 0.00 0.00 0.00 4.61
443 444 1.002624 GTCCGCCTCATTTCCCACA 60.003 57.895 0.00 0.00 0.00 4.17
444 445 0.608035 GTCCGCCTCATTTCCCACAA 60.608 55.000 0.00 0.00 0.00 3.33
445 446 0.111446 TCCGCCTCATTTCCCACAAA 59.889 50.000 0.00 0.00 0.00 2.83
446 447 0.965439 CCGCCTCATTTCCCACAAAA 59.035 50.000 0.00 0.00 0.00 2.44
447 448 1.067635 CCGCCTCATTTCCCACAAAAG 60.068 52.381 0.00 0.00 0.00 2.27
448 449 1.885887 CGCCTCATTTCCCACAAAAGA 59.114 47.619 0.00 0.00 0.00 2.52
449 450 2.493278 CGCCTCATTTCCCACAAAAGAT 59.507 45.455 0.00 0.00 0.00 2.40
450 451 3.428045 CGCCTCATTTCCCACAAAAGATC 60.428 47.826 0.00 0.00 0.00 2.75
451 452 3.766051 GCCTCATTTCCCACAAAAGATCT 59.234 43.478 0.00 0.00 0.00 2.75
452 453 4.142293 GCCTCATTTCCCACAAAAGATCTC 60.142 45.833 0.00 0.00 0.00 2.75
453 454 4.400567 CCTCATTTCCCACAAAAGATCTCC 59.599 45.833 0.00 0.00 0.00 3.71
454 455 4.009675 TCATTTCCCACAAAAGATCTCCG 58.990 43.478 0.00 0.00 0.00 4.63
455 456 1.821216 TTCCCACAAAAGATCTCCGC 58.179 50.000 0.00 0.00 0.00 5.54
456 457 0.984230 TCCCACAAAAGATCTCCGCT 59.016 50.000 0.00 0.00 0.00 5.52
457 458 1.066143 TCCCACAAAAGATCTCCGCTC 60.066 52.381 0.00 0.00 0.00 5.03
458 459 1.373570 CCACAAAAGATCTCCGCTCC 58.626 55.000 0.00 0.00 0.00 4.70
459 460 1.339055 CCACAAAAGATCTCCGCTCCA 60.339 52.381 0.00 0.00 0.00 3.86
460 461 2.636830 CACAAAAGATCTCCGCTCCAT 58.363 47.619 0.00 0.00 0.00 3.41
461 462 3.012518 CACAAAAGATCTCCGCTCCATT 58.987 45.455 0.00 0.00 0.00 3.16
462 463 3.441572 CACAAAAGATCTCCGCTCCATTT 59.558 43.478 0.00 0.00 0.00 2.32
463 464 4.635765 CACAAAAGATCTCCGCTCCATTTA 59.364 41.667 0.00 0.00 0.00 1.40
464 465 5.297776 CACAAAAGATCTCCGCTCCATTTAT 59.702 40.000 0.00 0.00 0.00 1.40
465 466 5.529060 ACAAAAGATCTCCGCTCCATTTATC 59.471 40.000 0.00 0.00 0.00 1.75
466 467 5.559148 AAAGATCTCCGCTCCATTTATCT 57.441 39.130 0.00 0.00 0.00 1.98
467 468 5.559148 AAGATCTCCGCTCCATTTATCTT 57.441 39.130 0.00 0.00 0.00 2.40
468 469 5.559148 AGATCTCCGCTCCATTTATCTTT 57.441 39.130 0.00 0.00 0.00 2.52
469 470 5.934781 AGATCTCCGCTCCATTTATCTTTT 58.065 37.500 0.00 0.00 0.00 2.27
470 471 6.360618 AGATCTCCGCTCCATTTATCTTTTT 58.639 36.000 0.00 0.00 0.00 1.94
471 472 5.818136 TCTCCGCTCCATTTATCTTTTTG 57.182 39.130 0.00 0.00 0.00 2.44
472 473 4.096382 TCTCCGCTCCATTTATCTTTTTGC 59.904 41.667 0.00 0.00 0.00 3.68
473 474 3.130340 TCCGCTCCATTTATCTTTTTGCC 59.870 43.478 0.00 0.00 0.00 4.52
474 475 3.119173 CCGCTCCATTTATCTTTTTGCCA 60.119 43.478 0.00 0.00 0.00 4.92
475 476 4.441913 CCGCTCCATTTATCTTTTTGCCAT 60.442 41.667 0.00 0.00 0.00 4.40
476 477 4.741676 CGCTCCATTTATCTTTTTGCCATC 59.258 41.667 0.00 0.00 0.00 3.51
477 478 4.741676 GCTCCATTTATCTTTTTGCCATCG 59.258 41.667 0.00 0.00 0.00 3.84
478 479 5.679638 GCTCCATTTATCTTTTTGCCATCGT 60.680 40.000 0.00 0.00 0.00 3.73
479 480 5.649557 TCCATTTATCTTTTTGCCATCGTG 58.350 37.500 0.00 0.00 0.00 4.35
480 481 4.805192 CCATTTATCTTTTTGCCATCGTGG 59.195 41.667 0.25 0.25 41.55 4.94
490 491 3.458872 CCATCGTGGCACATACAGT 57.541 52.632 19.09 0.00 44.52 3.55
491 492 2.595124 CCATCGTGGCACATACAGTA 57.405 50.000 19.09 0.00 44.52 2.74
492 493 2.473816 CCATCGTGGCACATACAGTAG 58.526 52.381 19.09 0.00 44.52 2.57
493 494 1.860950 CATCGTGGCACATACAGTAGC 59.139 52.381 19.09 0.00 44.52 3.58
494 495 0.892063 TCGTGGCACATACAGTAGCA 59.108 50.000 19.09 0.00 44.52 3.49
495 496 1.273886 TCGTGGCACATACAGTAGCAA 59.726 47.619 19.09 0.00 44.52 3.91
496 497 2.073056 CGTGGCACATACAGTAGCAAA 58.927 47.619 19.09 0.00 44.52 3.68
497 498 2.482336 CGTGGCACATACAGTAGCAAAA 59.518 45.455 19.09 0.00 44.52 2.44
498 499 3.058570 CGTGGCACATACAGTAGCAAAAA 60.059 43.478 19.09 0.00 44.52 1.94
499 500 4.379394 CGTGGCACATACAGTAGCAAAAAT 60.379 41.667 19.09 0.00 44.52 1.82
500 501 5.469479 GTGGCACATACAGTAGCAAAAATT 58.531 37.500 13.86 0.00 44.52 1.82
501 502 6.616947 GTGGCACATACAGTAGCAAAAATTA 58.383 36.000 13.86 0.00 44.52 1.40
502 503 7.087639 GTGGCACATACAGTAGCAAAAATTAA 58.912 34.615 13.86 0.00 44.52 1.40
503 504 7.596995 GTGGCACATACAGTAGCAAAAATTAAA 59.403 33.333 13.86 0.00 44.52 1.52
504 505 8.144478 TGGCACATACAGTAGCAAAAATTAAAA 58.856 29.630 0.00 0.00 0.00 1.52
505 506 8.432359 GGCACATACAGTAGCAAAAATTAAAAC 58.568 33.333 0.00 0.00 0.00 2.43
506 507 8.973378 GCACATACAGTAGCAAAAATTAAAACA 58.027 29.630 0.00 0.00 0.00 2.83
512 513 9.660180 ACAGTAGCAAAAATTAAAACAAAAGGA 57.340 25.926 0.00 0.00 0.00 3.36
514 515 9.325198 AGTAGCAAAAATTAAAACAAAAGGAGG 57.675 29.630 0.00 0.00 0.00 4.30
515 516 9.320352 GTAGCAAAAATTAAAACAAAAGGAGGA 57.680 29.630 0.00 0.00 0.00 3.71
516 517 8.800370 AGCAAAAATTAAAACAAAAGGAGGAA 57.200 26.923 0.00 0.00 0.00 3.36
517 518 9.237187 AGCAAAAATTAAAACAAAAGGAGGAAA 57.763 25.926 0.00 0.00 0.00 3.13
529 530 9.546428 AACAAAAGGAGGAAATCTTTTTATGTG 57.454 29.630 0.00 0.00 43.23 3.21
530 531 8.923270 ACAAAAGGAGGAAATCTTTTTATGTGA 58.077 29.630 0.00 0.00 43.23 3.58
531 532 9.196552 CAAAAGGAGGAAATCTTTTTATGTGAC 57.803 33.333 0.00 0.00 43.23 3.67
532 533 6.743575 AGGAGGAAATCTTTTTATGTGACG 57.256 37.500 0.00 0.00 0.00 4.35
533 534 6.238648 AGGAGGAAATCTTTTTATGTGACGT 58.761 36.000 0.00 0.00 0.00 4.34
534 535 6.149474 AGGAGGAAATCTTTTTATGTGACGTG 59.851 38.462 0.00 0.00 0.00 4.49
535 536 5.699839 AGGAAATCTTTTTATGTGACGTGC 58.300 37.500 0.00 0.00 0.00 5.34
536 537 5.240623 AGGAAATCTTTTTATGTGACGTGCA 59.759 36.000 0.00 0.00 0.00 4.57
537 538 5.569059 GGAAATCTTTTTATGTGACGTGCAG 59.431 40.000 0.00 0.00 0.00 4.41
538 539 5.689383 AATCTTTTTATGTGACGTGCAGT 57.311 34.783 0.00 0.00 0.00 4.40
549 550 2.466866 CGTGCAGTCGATACGTACG 58.533 57.895 15.01 15.01 34.37 3.67
550 551 1.518522 CGTGCAGTCGATACGTACGC 61.519 60.000 16.72 0.00 34.13 4.42
551 552 0.247974 GTGCAGTCGATACGTACGCT 60.248 55.000 16.72 2.31 0.00 5.07
552 553 0.247934 TGCAGTCGATACGTACGCTG 60.248 55.000 16.72 14.01 37.66 5.18
553 554 0.928908 GCAGTCGATACGTACGCTGG 60.929 60.000 16.72 4.60 36.37 4.85
554 555 0.928908 CAGTCGATACGTACGCTGGC 60.929 60.000 16.72 4.07 34.26 4.85
555 556 1.656569 GTCGATACGTACGCTGGCC 60.657 63.158 16.72 0.00 0.00 5.36
556 557 2.724721 CGATACGTACGCTGGCCG 60.725 66.667 16.72 8.36 44.21 6.13
557 558 2.354305 GATACGTACGCTGGCCGG 60.354 66.667 16.72 7.41 42.52 6.13
558 559 4.580551 ATACGTACGCTGGCCGGC 62.581 66.667 27.67 27.67 42.52 6.13
574 575 2.746277 GCGACAGGAACCGGCAAT 60.746 61.111 0.00 0.00 0.00 3.56
575 576 1.448893 GCGACAGGAACCGGCAATA 60.449 57.895 0.00 0.00 0.00 1.90
576 577 1.702491 GCGACAGGAACCGGCAATAC 61.702 60.000 0.00 0.00 0.00 1.89
577 578 0.108329 CGACAGGAACCGGCAATACT 60.108 55.000 0.00 0.00 0.00 2.12
578 579 1.674817 CGACAGGAACCGGCAATACTT 60.675 52.381 0.00 0.00 0.00 2.24
579 580 2.007608 GACAGGAACCGGCAATACTTC 58.992 52.381 0.00 0.00 0.00 3.01
580 581 1.628846 ACAGGAACCGGCAATACTTCT 59.371 47.619 0.00 0.00 0.00 2.85
581 582 2.039879 ACAGGAACCGGCAATACTTCTT 59.960 45.455 0.00 0.00 0.00 2.52
582 583 3.081804 CAGGAACCGGCAATACTTCTTT 58.918 45.455 0.00 0.00 0.00 2.52
583 584 3.506067 CAGGAACCGGCAATACTTCTTTT 59.494 43.478 0.00 0.00 0.00 2.27
584 585 4.022329 CAGGAACCGGCAATACTTCTTTTT 60.022 41.667 0.00 0.00 0.00 1.94
604 605 1.448985 TTTTTGAGAATCGGAGCCGG 58.551 50.000 9.29 0.00 38.61 6.13
605 606 1.024579 TTTTGAGAATCGGAGCCGGC 61.025 55.000 21.89 21.89 38.61 6.13
606 607 2.178876 TTTGAGAATCGGAGCCGGCA 62.179 55.000 31.54 8.23 38.61 5.69
607 608 2.178876 TTGAGAATCGGAGCCGGCAA 62.179 55.000 31.54 11.54 38.61 4.52
608 609 1.227674 GAGAATCGGAGCCGGCAAT 60.228 57.895 31.54 9.09 40.25 3.56
609 610 0.033504 GAGAATCGGAGCCGGCAATA 59.966 55.000 31.54 11.53 40.25 1.90
610 611 0.249911 AGAATCGGAGCCGGCAATAC 60.250 55.000 31.54 16.31 40.25 1.89
611 612 0.249911 GAATCGGAGCCGGCAATACT 60.250 55.000 31.54 7.13 40.25 2.12
612 613 0.180406 AATCGGAGCCGGCAATACTT 59.820 50.000 31.54 13.45 40.25 2.24
613 614 0.532862 ATCGGAGCCGGCAATACTTG 60.533 55.000 31.54 10.81 40.25 3.16
614 615 1.449601 CGGAGCCGGCAATACTTGT 60.450 57.895 31.54 4.27 35.56 3.16
615 616 1.024579 CGGAGCCGGCAATACTTGTT 61.025 55.000 31.54 3.33 35.56 2.83
616 617 0.733150 GGAGCCGGCAATACTTGTTC 59.267 55.000 31.54 13.84 0.00 3.18
617 618 0.733150 GAGCCGGCAATACTTGTTCC 59.267 55.000 31.54 0.00 0.00 3.62
618 619 0.328258 AGCCGGCAATACTTGTTCCT 59.672 50.000 31.54 0.00 0.00 3.36
619 620 0.733150 GCCGGCAATACTTGTTCCTC 59.267 55.000 24.80 0.00 0.00 3.71
620 621 1.006832 CCGGCAATACTTGTTCCTCG 58.993 55.000 0.00 0.00 0.00 4.63
621 622 0.373716 CGGCAATACTTGTTCCTCGC 59.626 55.000 0.00 0.00 0.00 5.03
622 623 0.733150 GGCAATACTTGTTCCTCGCC 59.267 55.000 0.00 0.00 0.00 5.54
623 624 1.448985 GCAATACTTGTTCCTCGCCA 58.551 50.000 0.00 0.00 0.00 5.69
624 625 1.130561 GCAATACTTGTTCCTCGCCAC 59.869 52.381 0.00 0.00 0.00 5.01
625 626 1.393539 CAATACTTGTTCCTCGCCACG 59.606 52.381 0.00 0.00 0.00 4.94
626 627 0.606604 ATACTTGTTCCTCGCCACGT 59.393 50.000 0.00 0.00 0.00 4.49
627 628 1.246649 TACTTGTTCCTCGCCACGTA 58.753 50.000 0.00 0.00 0.00 3.57
628 629 0.390124 ACTTGTTCCTCGCCACGTAA 59.610 50.000 0.00 0.00 0.00 3.18
629 630 1.202557 ACTTGTTCCTCGCCACGTAAA 60.203 47.619 0.00 0.00 0.00 2.01
630 631 1.193874 CTTGTTCCTCGCCACGTAAAC 59.806 52.381 0.00 0.00 0.00 2.01
631 632 0.104487 TGTTCCTCGCCACGTAAACA 59.896 50.000 0.00 0.00 0.00 2.83
632 633 1.219646 GTTCCTCGCCACGTAAACAA 58.780 50.000 0.00 0.00 0.00 2.83
633 634 1.598601 GTTCCTCGCCACGTAAACAAA 59.401 47.619 0.00 0.00 0.00 2.83
634 635 1.950828 TCCTCGCCACGTAAACAAAA 58.049 45.000 0.00 0.00 0.00 2.44
635 636 2.286872 TCCTCGCCACGTAAACAAAAA 58.713 42.857 0.00 0.00 0.00 1.94
636 637 2.879646 TCCTCGCCACGTAAACAAAAAT 59.120 40.909 0.00 0.00 0.00 1.82
637 638 2.977169 CCTCGCCACGTAAACAAAAATG 59.023 45.455 0.00 0.00 0.00 2.32
638 639 2.977169 CTCGCCACGTAAACAAAAATGG 59.023 45.455 0.00 0.00 0.00 3.16
639 640 2.358267 TCGCCACGTAAACAAAAATGGT 59.642 40.909 0.00 0.00 0.00 3.55
640 641 2.469516 CGCCACGTAAACAAAAATGGTG 59.530 45.455 0.00 0.00 0.00 4.17
641 642 2.797719 GCCACGTAAACAAAAATGGTGG 59.202 45.455 3.05 3.05 44.72 4.61
642 643 3.385577 CCACGTAAACAAAAATGGTGGG 58.614 45.455 0.00 0.00 39.72 4.61
643 644 3.181474 CCACGTAAACAAAAATGGTGGGT 60.181 43.478 0.00 0.00 39.72 4.51
644 645 4.434520 CACGTAAACAAAAATGGTGGGTT 58.565 39.130 0.00 0.00 0.00 4.11
645 646 5.451520 CCACGTAAACAAAAATGGTGGGTTA 60.452 40.000 0.00 0.00 39.72 2.85
646 647 5.459434 CACGTAAACAAAAATGGTGGGTTAC 59.541 40.000 0.00 0.00 0.00 2.50
647 648 5.360429 ACGTAAACAAAAATGGTGGGTTACT 59.640 36.000 0.00 0.00 0.00 2.24
648 649 6.545298 ACGTAAACAAAAATGGTGGGTTACTA 59.455 34.615 0.00 0.00 0.00 1.82
649 650 7.079475 CGTAAACAAAAATGGTGGGTTACTAG 58.921 38.462 0.00 0.00 0.00 2.57
650 651 7.255208 CGTAAACAAAAATGGTGGGTTACTAGT 60.255 37.037 0.00 0.00 0.00 2.57
651 652 9.065798 GTAAACAAAAATGGTGGGTTACTAGTA 57.934 33.333 0.00 0.00 0.00 1.82
652 653 8.715190 AAACAAAAATGGTGGGTTACTAGTAT 57.285 30.769 2.79 0.00 0.00 2.12
653 654 7.696992 ACAAAAATGGTGGGTTACTAGTATG 57.303 36.000 2.79 0.00 0.00 2.39
654 655 6.661805 ACAAAAATGGTGGGTTACTAGTATGG 59.338 38.462 2.79 0.00 0.00 2.74
655 656 6.397217 AAAATGGTGGGTTACTAGTATGGT 57.603 37.500 2.79 0.00 0.00 3.55
656 657 6.397217 AAATGGTGGGTTACTAGTATGGTT 57.603 37.500 2.79 0.00 0.00 3.67
657 658 7.513560 AAATGGTGGGTTACTAGTATGGTTA 57.486 36.000 2.79 0.00 0.00 2.85
658 659 6.742559 ATGGTGGGTTACTAGTATGGTTAG 57.257 41.667 2.79 0.00 0.00 2.34
659 660 5.592795 TGGTGGGTTACTAGTATGGTTAGT 58.407 41.667 2.79 0.00 35.62 2.24
660 661 6.024893 TGGTGGGTTACTAGTATGGTTAGTT 58.975 40.000 2.79 0.00 33.60 2.24
661 662 6.501453 TGGTGGGTTACTAGTATGGTTAGTTT 59.499 38.462 2.79 0.00 33.60 2.66
662 663 7.017452 TGGTGGGTTACTAGTATGGTTAGTTTT 59.983 37.037 2.79 0.00 33.60 2.43
663 664 7.884877 GGTGGGTTACTAGTATGGTTAGTTTTT 59.115 37.037 2.79 0.00 33.60 1.94
702 703 8.747538 ATCAAGTGGTAGTATTGTTTAATCCC 57.252 34.615 0.00 0.00 0.00 3.85
703 704 7.114095 TCAAGTGGTAGTATTGTTTAATCCCC 58.886 38.462 0.00 0.00 0.00 4.81
704 705 6.645884 AGTGGTAGTATTGTTTAATCCCCA 57.354 37.500 0.00 0.00 0.00 4.96
705 706 6.420638 AGTGGTAGTATTGTTTAATCCCCAC 58.579 40.000 0.00 0.00 39.07 4.61
706 707 5.295045 GTGGTAGTATTGTTTAATCCCCACG 59.705 44.000 0.00 0.00 30.52 4.94
707 708 5.189342 TGGTAGTATTGTTTAATCCCCACGA 59.811 40.000 0.00 0.00 0.00 4.35
708 709 5.525012 GGTAGTATTGTTTAATCCCCACGAC 59.475 44.000 0.00 0.00 0.00 4.34
709 710 5.168647 AGTATTGTTTAATCCCCACGACA 57.831 39.130 0.00 0.00 0.00 4.35
710 711 4.939439 AGTATTGTTTAATCCCCACGACAC 59.061 41.667 0.00 0.00 0.00 3.67
711 712 2.932855 TGTTTAATCCCCACGACACA 57.067 45.000 0.00 0.00 0.00 3.72
712 713 3.210232 TGTTTAATCCCCACGACACAA 57.790 42.857 0.00 0.00 0.00 3.33
713 714 3.552875 TGTTTAATCCCCACGACACAAA 58.447 40.909 0.00 0.00 0.00 2.83
714 715 3.315749 TGTTTAATCCCCACGACACAAAC 59.684 43.478 0.00 0.00 0.00 2.93
715 716 2.932855 TAATCCCCACGACACAAACA 57.067 45.000 0.00 0.00 0.00 2.83
716 717 2.286365 AATCCCCACGACACAAACAT 57.714 45.000 0.00 0.00 0.00 2.71
717 718 2.286365 ATCCCCACGACACAAACATT 57.714 45.000 0.00 0.00 0.00 2.71
718 719 1.313772 TCCCCACGACACAAACATTG 58.686 50.000 0.00 0.00 0.00 2.82
719 720 0.318614 CCCCACGACACAAACATTGC 60.319 55.000 0.00 0.00 0.00 3.56
720 721 0.383590 CCCACGACACAAACATTGCA 59.616 50.000 0.00 0.00 0.00 4.08
721 722 1.000385 CCCACGACACAAACATTGCAT 60.000 47.619 0.00 0.00 0.00 3.96
722 723 2.318578 CCACGACACAAACATTGCATC 58.681 47.619 0.00 0.00 0.00 3.91
723 724 2.030893 CCACGACACAAACATTGCATCT 60.031 45.455 0.00 0.00 0.00 2.90
724 725 2.975193 CACGACACAAACATTGCATCTG 59.025 45.455 0.00 0.00 0.00 2.90
725 726 1.980844 CGACACAAACATTGCATCTGC 59.019 47.619 0.00 0.00 42.50 4.26
787 789 2.374184 TGAGTTGGTTGACAGTTTGGG 58.626 47.619 0.00 0.00 0.00 4.12
791 793 0.464735 TGGTTGACAGTTTGGGACCG 60.465 55.000 0.00 0.00 0.00 4.79
808 810 3.602483 GACCGCTACTTCAAAATACCCA 58.398 45.455 0.00 0.00 0.00 4.51
818 820 5.829391 ACTTCAAAATACCCAAACTACGGTT 59.171 36.000 0.00 0.00 37.24 4.44
851 853 0.930726 AAGGGGTTCACTTTGGTCCA 59.069 50.000 0.00 0.00 0.00 4.02
957 960 4.180377 AGGTGAATACTAGTCCATCCGA 57.820 45.455 0.00 0.00 0.00 4.55
964 970 7.010275 GTGAATACTAGTCCATCCGAGTTTTTC 59.990 40.741 0.00 0.00 0.00 2.29
1020 1079 3.041940 CGGGAGCGCGTCAAGTTT 61.042 61.111 8.43 0.00 0.00 2.66
1234 1301 1.614241 CGTCAAGTACCTCCAGGGGG 61.614 65.000 2.59 2.59 40.27 5.40
1250 1317 3.998672 GGTGGACGTCAAGCCCGA 61.999 66.667 18.91 0.00 0.00 5.14
1339 1849 0.909133 TCCTGTCCATAGCTGTGGCA 60.909 55.000 23.86 21.48 41.70 4.92
1411 2117 5.395325 AAATTCGATGAGCGTATGAAGTG 57.605 39.130 0.00 0.00 41.80 3.16
1485 2191 3.832527 AGGTTTGTGGAGCAAGTACAAT 58.167 40.909 0.00 0.00 38.47 2.71
1576 2390 8.473358 TGATTCCCTTCGTTCATAGTATCTAA 57.527 34.615 0.00 0.00 0.00 2.10
1723 2537 9.145865 GGATATAATCAAACTGTAGCTTAGAGC 57.854 37.037 0.00 0.00 42.84 4.09
1782 2596 3.470709 ACTGGGAAATGATGTAGCATCG 58.529 45.455 4.89 0.00 0.00 3.84
1906 2720 8.677148 TTATATACTCCCTTTGCATGTTTCTC 57.323 34.615 0.00 0.00 0.00 2.87
1907 2721 3.228188 ACTCCCTTTGCATGTTTCTCA 57.772 42.857 0.00 0.00 0.00 3.27
1908 2722 3.771216 ACTCCCTTTGCATGTTTCTCAT 58.229 40.909 0.00 0.00 37.22 2.90
1925 2739 9.314133 TGTTTCTCATGTATGCCTAGATATACT 57.686 33.333 13.81 0.00 32.37 2.12
1926 2740 9.579768 GTTTCTCATGTATGCCTAGATATACTG 57.420 37.037 13.81 10.68 32.37 2.74
1927 2741 8.885693 TTCTCATGTATGCCTAGATATACTGT 57.114 34.615 13.81 0.00 32.37 3.55
1928 2742 9.975218 TTCTCATGTATGCCTAGATATACTGTA 57.025 33.333 13.81 0.00 32.37 2.74
1929 2743 9.975218 TCTCATGTATGCCTAGATATACTGTAA 57.025 33.333 13.81 0.21 32.37 2.41
1937 2751 9.712305 ATGCCTAGATATACTGTAAACATGTTC 57.288 33.333 12.39 0.49 0.00 3.18
1938 2752 8.700973 TGCCTAGATATACTGTAAACATGTTCA 58.299 33.333 12.39 5.67 0.00 3.18
1939 2753 9.712305 GCCTAGATATACTGTAAACATGTTCAT 57.288 33.333 12.39 0.00 0.00 2.57
1946 2760 6.826893 ACTGTAAACATGTTCATTGTTTGC 57.173 33.333 12.39 10.22 44.63 3.68
1947 2761 6.572519 ACTGTAAACATGTTCATTGTTTGCT 58.427 32.000 12.39 0.00 44.72 3.91
1948 2762 6.697019 ACTGTAAACATGTTCATTGTTTGCTC 59.303 34.615 12.39 6.52 44.72 4.26
1949 2763 6.567959 TGTAAACATGTTCATTGTTTGCTCA 58.432 32.000 12.39 8.32 44.72 4.26
1950 2764 7.208777 TGTAAACATGTTCATTGTTTGCTCAT 58.791 30.769 12.39 0.00 44.72 2.90
1951 2765 6.533819 AAACATGTTCATTGTTTGCTCATG 57.466 33.333 12.39 0.00 43.65 3.07
1952 2766 5.204409 ACATGTTCATTGTTTGCTCATGT 57.796 34.783 0.00 0.00 40.73 3.21
1953 2767 6.330004 ACATGTTCATTGTTTGCTCATGTA 57.670 33.333 0.00 0.00 42.12 2.29
1954 2768 6.927416 ACATGTTCATTGTTTGCTCATGTAT 58.073 32.000 0.00 0.00 42.12 2.29
1955 2769 6.809689 ACATGTTCATTGTTTGCTCATGTATG 59.190 34.615 0.00 0.00 42.12 2.39
1956 2770 5.162794 TGTTCATTGTTTGCTCATGTATGC 58.837 37.500 0.00 0.00 0.00 3.14
1957 2771 4.374843 TCATTGTTTGCTCATGTATGCC 57.625 40.909 0.00 0.00 0.00 4.40
1958 2772 4.018490 TCATTGTTTGCTCATGTATGCCT 58.982 39.130 0.00 0.00 0.00 4.75
1959 2773 5.192176 TCATTGTTTGCTCATGTATGCCTA 58.808 37.500 0.00 0.00 0.00 3.93
1960 2774 5.297527 TCATTGTTTGCTCATGTATGCCTAG 59.702 40.000 0.00 0.00 0.00 3.02
1961 2775 4.486125 TGTTTGCTCATGTATGCCTAGA 57.514 40.909 0.00 0.00 0.00 2.43
1962 2776 4.191544 TGTTTGCTCATGTATGCCTAGAC 58.808 43.478 0.00 0.00 0.00 2.59
1963 2777 4.191544 GTTTGCTCATGTATGCCTAGACA 58.808 43.478 0.00 0.00 31.77 3.41
1964 2778 4.486125 TTGCTCATGTATGCCTAGACAA 57.514 40.909 0.00 0.00 30.87 3.18
1965 2779 4.063998 TGCTCATGTATGCCTAGACAAG 57.936 45.455 0.00 0.00 30.87 3.16
1978 2792 5.362556 CCTAGACAAGGTGACACATTTTG 57.637 43.478 8.08 10.80 40.94 2.44
1979 2793 3.715628 AGACAAGGTGACACATTTTGC 57.284 42.857 8.08 5.74 0.00 3.68
1980 2794 3.023119 AGACAAGGTGACACATTTTGCA 58.977 40.909 8.08 0.00 0.00 4.08
1981 2795 3.067180 AGACAAGGTGACACATTTTGCAG 59.933 43.478 8.08 0.00 0.00 4.41
1982 2796 2.760092 ACAAGGTGACACATTTTGCAGT 59.240 40.909 8.08 0.00 0.00 4.40
1983 2797 3.181487 ACAAGGTGACACATTTTGCAGTC 60.181 43.478 8.08 0.00 0.00 3.51
1984 2798 2.936202 AGGTGACACATTTTGCAGTCT 58.064 42.857 8.08 0.00 30.21 3.24
1985 2799 2.620115 AGGTGACACATTTTGCAGTCTG 59.380 45.455 8.08 0.00 30.21 3.51
1986 2800 2.287788 GGTGACACATTTTGCAGTCTGG 60.288 50.000 8.08 0.00 30.21 3.86
1987 2801 2.618241 GTGACACATTTTGCAGTCTGGA 59.382 45.455 0.00 0.00 30.21 3.86
1988 2802 2.880268 TGACACATTTTGCAGTCTGGAG 59.120 45.455 1.14 0.00 30.21 3.86
1989 2803 2.880890 GACACATTTTGCAGTCTGGAGT 59.119 45.455 1.14 0.00 0.00 3.85
1990 2804 4.065088 GACACATTTTGCAGTCTGGAGTA 58.935 43.478 1.14 0.00 0.00 2.59
1991 2805 4.067896 ACACATTTTGCAGTCTGGAGTAG 58.932 43.478 1.14 0.00 0.00 2.57
1992 2806 4.202357 ACACATTTTGCAGTCTGGAGTAGA 60.202 41.667 1.14 0.00 0.00 2.59
2004 2818 5.885230 TCTGGAGTAGACATTTTGCATTG 57.115 39.130 0.00 0.00 0.00 2.82
2116 2930 4.892345 TCCCAGTCAGAAGTGAGATATGAG 59.108 45.833 0.00 0.00 31.53 2.90
2121 2935 4.340666 GTCAGAAGTGAGATATGAGCCTCA 59.659 45.833 0.00 0.00 37.11 3.86
2185 2999 2.771943 TCTTTGGTGTCACCTTGTCTCT 59.228 45.455 22.56 0.00 39.58 3.10
2186 3000 2.910688 TTGGTGTCACCTTGTCTCTC 57.089 50.000 22.56 0.00 39.58 3.20
2187 3001 1.048601 TGGTGTCACCTTGTCTCTCC 58.951 55.000 22.56 0.00 39.58 3.71
2188 3002 1.343069 GGTGTCACCTTGTCTCTCCT 58.657 55.000 15.22 0.00 34.73 3.69
2189 3003 1.694696 GGTGTCACCTTGTCTCTCCTT 59.305 52.381 15.22 0.00 34.73 3.36
2190 3004 2.289133 GGTGTCACCTTGTCTCTCCTTC 60.289 54.545 15.22 0.00 34.73 3.46
2356 3172 4.154918 CGCAGAGATGGCTTTAAAAAGTCT 59.845 41.667 8.40 1.98 41.12 3.24
2370 3186 8.964420 TTTAAAAAGTCTGCAATGCATACTAC 57.036 30.769 23.34 12.81 43.39 2.73
2371 3187 6.824305 AAAAAGTCTGCAATGCATACTACT 57.176 33.333 23.34 14.61 43.39 2.57
2372 3188 6.428385 AAAAGTCTGCAATGCATACTACTC 57.572 37.500 23.34 0.00 43.39 2.59
2373 3189 4.065321 AGTCTGCAATGCATACTACTCC 57.935 45.455 22.10 0.00 42.61 3.85
2374 3190 3.452264 AGTCTGCAATGCATACTACTCCA 59.548 43.478 22.10 0.00 42.61 3.86
2375 3191 3.806521 GTCTGCAATGCATACTACTCCAG 59.193 47.826 15.21 0.00 38.13 3.86
2376 3192 3.452264 TCTGCAATGCATACTACTCCAGT 59.548 43.478 8.91 0.00 38.13 4.00
2377 3193 3.797039 TGCAATGCATACTACTCCAGTC 58.203 45.455 2.72 0.00 34.25 3.51
2378 3194 3.452264 TGCAATGCATACTACTCCAGTCT 59.548 43.478 2.72 0.00 34.25 3.24
2379 3195 4.649218 TGCAATGCATACTACTCCAGTCTA 59.351 41.667 2.72 0.00 34.25 2.59
2380 3196 5.221322 TGCAATGCATACTACTCCAGTCTAG 60.221 44.000 2.72 0.00 34.25 2.43
2381 3197 5.010112 GCAATGCATACTACTCCAGTCTAGA 59.990 44.000 0.00 0.00 38.80 2.43
2382 3198 6.461648 GCAATGCATACTACTCCAGTCTAGAA 60.462 42.308 0.00 0.00 38.80 2.10
2383 3199 6.642707 ATGCATACTACTCCAGTCTAGAAC 57.357 41.667 0.00 0.00 38.80 3.01
2384 3200 5.756918 TGCATACTACTCCAGTCTAGAACT 58.243 41.667 0.00 0.00 38.80 3.01
2385 3201 5.823570 TGCATACTACTCCAGTCTAGAACTC 59.176 44.000 0.00 0.00 38.80 3.01
2386 3202 5.239963 GCATACTACTCCAGTCTAGAACTCC 59.760 48.000 0.00 0.00 38.80 3.85
2387 3203 4.931027 ACTACTCCAGTCTAGAACTCCA 57.069 45.455 0.00 0.00 35.45 3.86
2388 3204 5.258216 ACTACTCCAGTCTAGAACTCCAA 57.742 43.478 0.00 0.00 35.45 3.53
2389 3205 5.642165 ACTACTCCAGTCTAGAACTCCAAA 58.358 41.667 0.00 0.00 35.45 3.28
2390 3206 5.712917 ACTACTCCAGTCTAGAACTCCAAAG 59.287 44.000 0.00 0.00 35.45 2.77
2391 3207 3.835395 ACTCCAGTCTAGAACTCCAAAGG 59.165 47.826 0.00 0.00 35.45 3.11
2392 3208 4.090090 CTCCAGTCTAGAACTCCAAAGGA 58.910 47.826 0.00 0.00 35.45 3.36
2406 3222 6.062258 CTCCAAAGGAGTATTAACCAAGGA 57.938 41.667 4.89 0.00 44.25 3.36
2407 3223 6.062258 TCCAAAGGAGTATTAACCAAGGAG 57.938 41.667 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.702494 TGCATTCAAACATATTGTCAAATAACA 57.298 25.926 0.00 0.00 32.06 2.41
12 13 9.269453 TGATTTGCATTCAAACATATTGTCAAA 57.731 25.926 0.00 0.00 44.11 2.69
13 14 8.828688 TGATTTGCATTCAAACATATTGTCAA 57.171 26.923 0.00 0.00 44.11 3.18
14 15 8.828688 TTGATTTGCATTCAAACATATTGTCA 57.171 26.923 9.47 0.00 44.11 3.58
15 16 9.697250 CATTGATTTGCATTCAAACATATTGTC 57.303 29.630 14.40 0.00 44.11 3.18
16 17 9.221933 ACATTGATTTGCATTCAAACATATTGT 57.778 25.926 14.40 10.83 44.11 2.71
28 29 8.757789 CGCTCAATATTTACATTGATTTGCATT 58.242 29.630 0.00 0.00 42.49 3.56
29 30 7.383029 CCGCTCAATATTTACATTGATTTGCAT 59.617 33.333 0.00 0.00 42.49 3.96
30 31 6.696583 CCGCTCAATATTTACATTGATTTGCA 59.303 34.615 0.00 0.00 42.49 4.08
31 32 6.346040 GCCGCTCAATATTTACATTGATTTGC 60.346 38.462 0.00 0.23 42.49 3.68
32 33 6.144402 GGCCGCTCAATATTTACATTGATTTG 59.856 38.462 0.00 0.00 42.49 2.32
33 34 6.183360 TGGCCGCTCAATATTTACATTGATTT 60.183 34.615 0.00 0.00 42.49 2.17
34 35 5.301551 TGGCCGCTCAATATTTACATTGATT 59.698 36.000 0.00 0.00 42.49 2.57
35 36 4.826733 TGGCCGCTCAATATTTACATTGAT 59.173 37.500 0.00 0.00 42.49 2.57
36 37 4.203226 TGGCCGCTCAATATTTACATTGA 58.797 39.130 0.00 0.00 41.49 2.57
37 38 4.539870 CTGGCCGCTCAATATTTACATTG 58.460 43.478 0.00 0.00 37.27 2.82
38 39 3.004734 GCTGGCCGCTCAATATTTACATT 59.995 43.478 11.61 0.00 35.14 2.71
39 40 2.554032 GCTGGCCGCTCAATATTTACAT 59.446 45.455 11.61 0.00 35.14 2.29
40 41 1.946768 GCTGGCCGCTCAATATTTACA 59.053 47.619 11.61 0.00 35.14 2.41
41 42 1.266989 GGCTGGCCGCTCAATATTTAC 59.733 52.381 17.07 0.00 39.13 2.01
42 43 1.604604 GGCTGGCCGCTCAATATTTA 58.395 50.000 17.07 0.00 39.13 1.40
43 44 2.419057 GGCTGGCCGCTCAATATTT 58.581 52.632 17.07 0.00 39.13 1.40
44 45 4.164258 GGCTGGCCGCTCAATATT 57.836 55.556 17.07 0.00 39.13 1.28
64 65 1.665916 CTCATATGTGCCGGCGAGG 60.666 63.158 23.90 8.91 44.97 4.63
65 66 0.941463 GACTCATATGTGCCGGCGAG 60.941 60.000 23.90 22.10 0.00 5.03
66 67 1.067416 GACTCATATGTGCCGGCGA 59.933 57.895 23.90 11.77 0.00 5.54
67 68 1.217585 CTGACTCATATGTGCCGGCG 61.218 60.000 23.90 6.13 0.00 6.46
68 69 1.502163 GCTGACTCATATGTGCCGGC 61.502 60.000 22.73 22.73 0.00 6.13
69 70 0.179076 TGCTGACTCATATGTGCCGG 60.179 55.000 0.00 0.00 0.00 6.13
70 71 0.933097 GTGCTGACTCATATGTGCCG 59.067 55.000 1.90 0.00 0.00 5.69
71 72 2.028420 TGTGCTGACTCATATGTGCC 57.972 50.000 1.90 0.00 0.00 5.01
72 73 4.348656 CAATTGTGCTGACTCATATGTGC 58.651 43.478 1.90 2.21 0.00 4.57
73 74 4.732647 GCCAATTGTGCTGACTCATATGTG 60.733 45.833 4.43 2.63 0.00 3.21
74 75 3.379372 GCCAATTGTGCTGACTCATATGT 59.621 43.478 4.43 0.00 0.00 2.29
75 76 3.379057 TGCCAATTGTGCTGACTCATATG 59.621 43.478 16.52 0.00 0.00 1.78
76 77 3.379372 GTGCCAATTGTGCTGACTCATAT 59.621 43.478 16.52 0.00 0.00 1.78
77 78 2.749076 GTGCCAATTGTGCTGACTCATA 59.251 45.455 16.52 0.00 0.00 2.15
78 79 1.542915 GTGCCAATTGTGCTGACTCAT 59.457 47.619 16.52 0.00 0.00 2.90
79 80 0.953727 GTGCCAATTGTGCTGACTCA 59.046 50.000 16.52 0.00 0.00 3.41
80 81 0.110056 CGTGCCAATTGTGCTGACTC 60.110 55.000 16.52 5.27 0.00 3.36
81 82 1.951510 CGTGCCAATTGTGCTGACT 59.048 52.632 16.52 0.00 0.00 3.41
82 83 1.730547 GCGTGCCAATTGTGCTGAC 60.731 57.895 16.52 8.89 0.00 3.51
83 84 0.605050 TAGCGTGCCAATTGTGCTGA 60.605 50.000 17.01 0.30 37.12 4.26
84 85 0.454957 GTAGCGTGCCAATTGTGCTG 60.455 55.000 17.01 11.86 37.12 4.41
85 86 1.586154 GGTAGCGTGCCAATTGTGCT 61.586 55.000 16.52 15.12 39.59 4.40
86 87 1.154035 GGTAGCGTGCCAATTGTGC 60.154 57.895 4.43 8.21 0.00 4.57
87 88 1.134487 CGGTAGCGTGCCAATTGTG 59.866 57.895 6.07 0.00 0.00 3.33
88 89 0.392461 ATCGGTAGCGTGCCAATTGT 60.392 50.000 14.79 0.00 0.00 2.71
89 90 0.304705 GATCGGTAGCGTGCCAATTG 59.695 55.000 14.79 0.00 0.00 2.32
90 91 0.814010 GGATCGGTAGCGTGCCAATT 60.814 55.000 14.79 0.00 0.00 2.32
91 92 1.227556 GGATCGGTAGCGTGCCAAT 60.228 57.895 14.79 0.00 0.00 3.16
92 93 2.173758 TTGGATCGGTAGCGTGCCAA 62.174 55.000 27.05 27.05 33.38 4.52
93 94 2.173758 TTTGGATCGGTAGCGTGCCA 62.174 55.000 20.86 20.86 0.00 4.92
94 95 0.814010 ATTTGGATCGGTAGCGTGCC 60.814 55.000 14.79 16.19 0.00 5.01
95 96 0.582005 GATTTGGATCGGTAGCGTGC 59.418 55.000 14.79 7.74 0.00 5.34
96 97 2.225068 AGATTTGGATCGGTAGCGTG 57.775 50.000 14.79 0.00 37.37 5.34
97 98 4.395959 TTTAGATTTGGATCGGTAGCGT 57.604 40.909 14.79 1.45 37.37 5.07
98 99 5.047847 TCTTTTAGATTTGGATCGGTAGCG 58.952 41.667 8.29 8.29 37.37 4.26
99 100 5.467063 CCTCTTTTAGATTTGGATCGGTAGC 59.533 44.000 0.00 0.00 37.37 3.58
100 101 6.702282 GTCCTCTTTTAGATTTGGATCGGTAG 59.298 42.308 0.00 0.00 37.37 3.18
101 102 6.579865 GTCCTCTTTTAGATTTGGATCGGTA 58.420 40.000 0.00 0.00 37.37 4.02
102 103 5.429130 GTCCTCTTTTAGATTTGGATCGGT 58.571 41.667 0.00 0.00 37.37 4.69
103 104 4.508124 CGTCCTCTTTTAGATTTGGATCGG 59.492 45.833 0.00 0.00 37.37 4.18
104 105 4.508124 CCGTCCTCTTTTAGATTTGGATCG 59.492 45.833 0.00 0.00 37.37 3.69
105 106 5.524281 GTCCGTCCTCTTTTAGATTTGGATC 59.476 44.000 0.00 0.00 0.00 3.36
106 107 5.429130 GTCCGTCCTCTTTTAGATTTGGAT 58.571 41.667 0.00 0.00 0.00 3.41
107 108 4.619863 CGTCCGTCCTCTTTTAGATTTGGA 60.620 45.833 0.00 0.00 0.00 3.53
108 109 3.617263 CGTCCGTCCTCTTTTAGATTTGG 59.383 47.826 0.00 0.00 0.00 3.28
109 110 3.062234 GCGTCCGTCCTCTTTTAGATTTG 59.938 47.826 0.00 0.00 0.00 2.32
110 111 3.259902 GCGTCCGTCCTCTTTTAGATTT 58.740 45.455 0.00 0.00 0.00 2.17
111 112 2.232941 TGCGTCCGTCCTCTTTTAGATT 59.767 45.455 0.00 0.00 0.00 2.40
112 113 1.822990 TGCGTCCGTCCTCTTTTAGAT 59.177 47.619 0.00 0.00 0.00 1.98
113 114 1.201647 CTGCGTCCGTCCTCTTTTAGA 59.798 52.381 0.00 0.00 0.00 2.10
114 115 1.630148 CTGCGTCCGTCCTCTTTTAG 58.370 55.000 0.00 0.00 0.00 1.85
115 116 0.245539 CCTGCGTCCGTCCTCTTTTA 59.754 55.000 0.00 0.00 0.00 1.52
116 117 1.004918 CCTGCGTCCGTCCTCTTTT 60.005 57.895 0.00 0.00 0.00 2.27
117 118 2.657237 CCTGCGTCCGTCCTCTTT 59.343 61.111 0.00 0.00 0.00 2.52
118 119 3.382832 CCCTGCGTCCGTCCTCTT 61.383 66.667 0.00 0.00 0.00 2.85
136 137 3.047877 GTTTGGGTCGGTCGCCTG 61.048 66.667 4.47 0.00 0.00 4.85
137 138 3.530910 CTGTTTGGGTCGGTCGCCT 62.531 63.158 4.47 0.00 0.00 5.52
138 139 2.798148 ATCTGTTTGGGTCGGTCGCC 62.798 60.000 0.00 0.00 0.00 5.54
139 140 0.108520 TATCTGTTTGGGTCGGTCGC 60.109 55.000 0.00 0.00 0.00 5.19
140 141 2.373540 TTATCTGTTTGGGTCGGTCG 57.626 50.000 0.00 0.00 0.00 4.79
159 160 1.600485 ACGGCGATTTCGTCTGTTTTT 59.400 42.857 16.62 0.00 42.59 1.94
160 161 1.223187 ACGGCGATTTCGTCTGTTTT 58.777 45.000 16.62 0.00 42.59 2.43
161 162 2.908817 ACGGCGATTTCGTCTGTTT 58.091 47.368 16.62 0.00 42.59 2.83
162 163 4.667420 ACGGCGATTTCGTCTGTT 57.333 50.000 16.62 0.00 42.59 3.16
167 168 0.446222 CAAATGGACGGCGATTTCGT 59.554 50.000 16.62 0.00 44.03 3.85
168 169 0.248054 CCAAATGGACGGCGATTTCG 60.248 55.000 16.62 0.00 39.01 3.46
169 170 1.091537 TCCAAATGGACGGCGATTTC 58.908 50.000 16.62 0.00 39.78 2.17
170 171 3.257935 TCCAAATGGACGGCGATTT 57.742 47.368 16.62 5.28 39.78 2.17
180 181 0.732571 CAACGGGTCGATCCAAATGG 59.267 55.000 16.61 0.00 38.11 3.16
181 182 0.732571 CCAACGGGTCGATCCAAATG 59.267 55.000 16.61 9.83 38.11 2.32
182 183 0.616371 TCCAACGGGTCGATCCAAAT 59.384 50.000 16.61 0.00 38.11 2.32
183 184 0.036765 CTCCAACGGGTCGATCCAAA 60.037 55.000 16.61 0.00 38.11 3.28
184 185 1.189524 ACTCCAACGGGTCGATCCAA 61.190 55.000 16.61 0.00 38.11 3.53
185 186 1.189524 AACTCCAACGGGTCGATCCA 61.190 55.000 16.61 0.00 38.11 3.41
186 187 0.739813 CAACTCCAACGGGTCGATCC 60.740 60.000 4.00 4.00 34.93 3.36
187 188 1.359459 GCAACTCCAACGGGTCGATC 61.359 60.000 0.00 0.00 34.93 3.69
188 189 1.375523 GCAACTCCAACGGGTCGAT 60.376 57.895 0.00 0.00 34.93 3.59
189 190 2.029964 GCAACTCCAACGGGTCGA 59.970 61.111 0.00 0.00 34.93 4.20
190 191 2.027625 GAGCAACTCCAACGGGTCG 61.028 63.158 0.00 0.00 34.93 4.79
191 192 0.606604 TAGAGCAACTCCAACGGGTC 59.393 55.000 0.00 0.00 34.93 4.46
192 193 1.002087 CTTAGAGCAACTCCAACGGGT 59.998 52.381 0.00 0.00 34.93 5.28
193 194 1.726853 CTTAGAGCAACTCCAACGGG 58.273 55.000 0.00 0.00 0.00 5.28
194 195 1.079503 GCTTAGAGCAACTCCAACGG 58.920 55.000 0.00 0.00 41.89 4.44
195 196 2.086054 AGCTTAGAGCAACTCCAACG 57.914 50.000 2.47 0.00 45.56 4.10
196 197 2.744741 GGAAGCTTAGAGCAACTCCAAC 59.255 50.000 0.00 0.00 45.56 3.77
197 198 2.612972 CGGAAGCTTAGAGCAACTCCAA 60.613 50.000 0.00 0.00 45.56 3.53
198 199 1.066858 CGGAAGCTTAGAGCAACTCCA 60.067 52.381 0.00 0.00 45.56 3.86
199 200 1.066787 ACGGAAGCTTAGAGCAACTCC 60.067 52.381 0.00 4.57 45.56 3.85
200 201 2.371910 ACGGAAGCTTAGAGCAACTC 57.628 50.000 0.00 0.00 45.56 3.01
201 202 2.417719 CAACGGAAGCTTAGAGCAACT 58.582 47.619 0.00 0.00 45.56 3.16
202 203 1.135944 GCAACGGAAGCTTAGAGCAAC 60.136 52.381 0.00 0.00 45.56 4.17
203 204 1.156736 GCAACGGAAGCTTAGAGCAA 58.843 50.000 0.00 0.00 45.56 3.91
204 205 0.673644 GGCAACGGAAGCTTAGAGCA 60.674 55.000 0.00 0.00 45.56 4.26
205 206 1.369839 GGGCAACGGAAGCTTAGAGC 61.370 60.000 0.00 6.96 38.78 4.09
206 207 0.744771 GGGGCAACGGAAGCTTAGAG 60.745 60.000 0.00 0.00 37.60 2.43
207 208 1.298667 GGGGCAACGGAAGCTTAGA 59.701 57.895 0.00 0.00 37.60 2.10
208 209 2.106683 CGGGGCAACGGAAGCTTAG 61.107 63.158 0.00 0.00 37.60 2.18
209 210 2.046700 CGGGGCAACGGAAGCTTA 60.047 61.111 0.00 0.00 37.60 3.09
217 218 0.179056 AATATCTGTCCGGGGCAACG 60.179 55.000 1.61 0.00 37.60 4.10
218 219 2.052782 AAATATCTGTCCGGGGCAAC 57.947 50.000 1.61 0.00 0.00 4.17
219 220 2.650322 GAAAATATCTGTCCGGGGCAA 58.350 47.619 1.61 0.00 0.00 4.52
220 221 1.133915 GGAAAATATCTGTCCGGGGCA 60.134 52.381 0.00 0.00 0.00 5.36
221 222 1.143073 AGGAAAATATCTGTCCGGGGC 59.857 52.381 0.00 0.00 36.49 5.80
222 223 3.118038 TCAAGGAAAATATCTGTCCGGGG 60.118 47.826 0.00 0.00 36.49 5.73
223 224 4.150897 TCAAGGAAAATATCTGTCCGGG 57.849 45.455 0.00 0.00 36.49 5.73
224 225 5.065218 CAGTTCAAGGAAAATATCTGTCCGG 59.935 44.000 0.00 0.00 36.49 5.14
225 226 5.447818 GCAGTTCAAGGAAAATATCTGTCCG 60.448 44.000 0.00 0.00 36.49 4.79
226 227 5.649831 AGCAGTTCAAGGAAAATATCTGTCC 59.350 40.000 0.00 0.00 0.00 4.02
227 228 6.749923 AGCAGTTCAAGGAAAATATCTGTC 57.250 37.500 0.00 0.00 0.00 3.51
228 229 6.716628 TGAAGCAGTTCAAGGAAAATATCTGT 59.283 34.615 0.00 0.00 39.85 3.41
229 230 7.149569 TGAAGCAGTTCAAGGAAAATATCTG 57.850 36.000 0.00 0.00 39.85 2.90
230 231 7.951347 ATGAAGCAGTTCAAGGAAAATATCT 57.049 32.000 0.00 0.00 45.88 1.98
231 232 8.246180 TGAATGAAGCAGTTCAAGGAAAATATC 58.754 33.333 0.00 0.00 45.88 1.63
232 233 8.125978 TGAATGAAGCAGTTCAAGGAAAATAT 57.874 30.769 0.00 0.00 45.88 1.28
233 234 7.309377 CCTGAATGAAGCAGTTCAAGGAAAATA 60.309 37.037 0.62 0.00 45.88 1.40
234 235 6.409524 TGAATGAAGCAGTTCAAGGAAAAT 57.590 33.333 0.00 0.00 45.88 1.82
235 236 5.221303 CCTGAATGAAGCAGTTCAAGGAAAA 60.221 40.000 0.62 0.00 45.88 2.29
236 237 4.279169 CCTGAATGAAGCAGTTCAAGGAAA 59.721 41.667 0.62 0.00 45.88 3.13
237 238 3.822735 CCTGAATGAAGCAGTTCAAGGAA 59.177 43.478 0.62 0.00 45.88 3.36
238 239 3.415212 CCTGAATGAAGCAGTTCAAGGA 58.585 45.455 0.62 0.00 45.88 3.36
239 240 2.094854 GCCTGAATGAAGCAGTTCAAGG 60.095 50.000 0.00 2.10 45.88 3.61
240 241 2.555325 TGCCTGAATGAAGCAGTTCAAG 59.445 45.455 0.00 0.00 45.88 3.02
241 242 2.555325 CTGCCTGAATGAAGCAGTTCAA 59.445 45.455 3.12 0.00 45.88 2.69
242 243 2.275134 TGCCTGAATGAAGCAGTTCA 57.725 45.000 0.00 0.00 46.81 3.18
247 248 0.251033 ACAGCTGCCTGAATGAAGCA 60.251 50.000 15.27 0.00 41.77 3.91
248 249 0.450983 GACAGCTGCCTGAATGAAGC 59.549 55.000 15.27 0.00 41.77 3.86
249 250 1.093159 GGACAGCTGCCTGAATGAAG 58.907 55.000 15.27 0.00 41.77 3.02
250 251 0.322816 GGGACAGCTGCCTGAATGAA 60.323 55.000 15.27 0.00 41.77 2.57
251 252 1.300963 GGGACAGCTGCCTGAATGA 59.699 57.895 15.27 0.00 41.77 2.57
252 253 1.001764 TGGGACAGCTGCCTGAATG 60.002 57.895 15.27 0.00 41.77 2.67
253 254 3.499406 TGGGACAGCTGCCTGAAT 58.501 55.556 15.27 0.00 41.77 2.57
263 264 4.170973 GCCTTTGCAATTCAATGGGACAG 61.171 47.826 0.00 0.00 45.30 3.51
264 265 2.289569 GCCTTTGCAATTCAATGGGACA 60.290 45.455 0.00 0.00 45.30 4.02
265 266 2.289569 TGCCTTTGCAATTCAATGGGAC 60.290 45.455 0.00 7.94 46.66 4.46
266 267 1.976404 TGCCTTTGCAATTCAATGGGA 59.024 42.857 0.00 13.74 46.66 4.37
267 268 2.476126 TGCCTTTGCAATTCAATGGG 57.524 45.000 0.00 11.49 46.66 4.00
278 279 1.145162 CGGTGTGTTTGTGCCTTTGC 61.145 55.000 0.00 0.00 38.26 3.68
279 280 1.145162 GCGGTGTGTTTGTGCCTTTG 61.145 55.000 0.00 0.00 0.00 2.77
280 281 1.140804 GCGGTGTGTTTGTGCCTTT 59.859 52.632 0.00 0.00 0.00 3.11
281 282 1.752694 AGCGGTGTGTTTGTGCCTT 60.753 52.632 0.00 0.00 0.00 4.35
282 283 2.124320 AGCGGTGTGTTTGTGCCT 60.124 55.556 0.00 0.00 0.00 4.75
283 284 2.026014 CAGCGGTGTGTTTGTGCC 59.974 61.111 6.41 0.00 0.00 5.01
284 285 2.655044 GCAGCGGTGTGTTTGTGC 60.655 61.111 17.07 0.00 0.00 4.57
285 286 2.026014 GGCAGCGGTGTGTTTGTG 59.974 61.111 17.07 0.00 0.00 3.33
286 287 3.582120 CGGCAGCGGTGTGTTTGT 61.582 61.111 17.07 0.00 0.00 2.83
287 288 4.326766 CCGGCAGCGGTGTGTTTG 62.327 66.667 17.07 1.90 0.00 2.93
301 302 1.300233 GTAGAATCAGGCGAGCCGG 60.300 63.158 8.63 8.28 41.95 6.13
302 303 1.658717 CGTAGAATCAGGCGAGCCG 60.659 63.158 8.63 4.17 41.95 5.52
303 304 0.595310 GACGTAGAATCAGGCGAGCC 60.595 60.000 5.89 5.89 0.00 4.70
304 305 0.382515 AGACGTAGAATCAGGCGAGC 59.617 55.000 0.00 0.00 0.00 5.03
305 306 1.333347 CGAGACGTAGAATCAGGCGAG 60.333 57.143 0.00 0.00 0.00 5.03
306 307 0.656259 CGAGACGTAGAATCAGGCGA 59.344 55.000 0.00 0.00 0.00 5.54
307 308 0.930742 GCGAGACGTAGAATCAGGCG 60.931 60.000 0.00 0.00 0.00 5.52
308 309 0.595310 GGCGAGACGTAGAATCAGGC 60.595 60.000 0.00 0.00 0.00 4.85
309 310 0.030908 GGGCGAGACGTAGAATCAGG 59.969 60.000 0.00 0.00 0.00 3.86
310 311 0.738975 TGGGCGAGACGTAGAATCAG 59.261 55.000 0.00 0.00 0.00 2.90
311 312 1.179152 TTGGGCGAGACGTAGAATCA 58.821 50.000 0.00 0.00 0.00 2.57
312 313 2.288961 TTTGGGCGAGACGTAGAATC 57.711 50.000 0.00 0.00 0.00 2.52
313 314 2.618053 CTTTTGGGCGAGACGTAGAAT 58.382 47.619 0.00 0.00 0.00 2.40
314 315 1.938016 GCTTTTGGGCGAGACGTAGAA 60.938 52.381 0.00 0.00 0.00 2.10
315 316 0.389426 GCTTTTGGGCGAGACGTAGA 60.389 55.000 0.00 0.00 0.00 2.59
316 317 0.389948 AGCTTTTGGGCGAGACGTAG 60.390 55.000 0.00 0.00 37.29 3.51
317 318 0.889994 TAGCTTTTGGGCGAGACGTA 59.110 50.000 0.00 0.00 37.29 3.57
318 319 0.389948 CTAGCTTTTGGGCGAGACGT 60.390 55.000 0.00 0.00 37.16 4.34
319 320 0.108804 TCTAGCTTTTGGGCGAGACG 60.109 55.000 0.00 0.00 38.62 4.18
320 321 2.317530 ATCTAGCTTTTGGGCGAGAC 57.682 50.000 0.00 0.00 44.15 3.36
321 322 3.350219 AAATCTAGCTTTTGGGCGAGA 57.650 42.857 0.00 2.25 45.07 4.04
322 323 4.168760 CAAAAATCTAGCTTTTGGGCGAG 58.831 43.478 16.35 0.00 39.19 5.03
323 324 3.613910 GCAAAAATCTAGCTTTTGGGCGA 60.614 43.478 21.58 0.00 41.82 5.54
324 325 2.667969 GCAAAAATCTAGCTTTTGGGCG 59.332 45.455 21.58 8.28 41.82 6.13
325 326 3.002791 GGCAAAAATCTAGCTTTTGGGC 58.997 45.455 21.58 18.61 41.82 5.36
326 327 4.541973 AGGCAAAAATCTAGCTTTTGGG 57.458 40.909 21.58 12.47 41.82 4.12
327 328 4.931601 GGAAGGCAAAAATCTAGCTTTTGG 59.068 41.667 21.58 13.90 41.82 3.28
328 329 4.931601 GGGAAGGCAAAAATCTAGCTTTTG 59.068 41.667 18.41 18.41 43.53 2.44
329 330 4.020218 GGGGAAGGCAAAAATCTAGCTTTT 60.020 41.667 0.00 0.00 0.00 2.27
330 331 3.515502 GGGGAAGGCAAAAATCTAGCTTT 59.484 43.478 0.00 0.00 0.00 3.51
331 332 3.099905 GGGGAAGGCAAAAATCTAGCTT 58.900 45.455 0.00 0.00 0.00 3.74
332 333 2.739943 GGGGAAGGCAAAAATCTAGCT 58.260 47.619 0.00 0.00 0.00 3.32
333 334 1.405463 CGGGGAAGGCAAAAATCTAGC 59.595 52.381 0.00 0.00 0.00 3.42
334 335 2.024414 CCGGGGAAGGCAAAAATCTAG 58.976 52.381 0.00 0.00 0.00 2.43
335 336 2.137810 CCGGGGAAGGCAAAAATCTA 57.862 50.000 0.00 0.00 0.00 1.98
336 337 2.976099 CCGGGGAAGGCAAAAATCT 58.024 52.632 0.00 0.00 0.00 2.40
345 346 3.938637 GAAACAGGGCCGGGGAAGG 62.939 68.421 8.94 0.00 0.00 3.46
346 347 2.361230 GAAACAGGGCCGGGGAAG 60.361 66.667 8.94 0.00 0.00 3.46
347 348 2.014033 AAAGAAACAGGGCCGGGGAA 62.014 55.000 8.94 0.00 0.00 3.97
348 349 2.420466 GAAAGAAACAGGGCCGGGGA 62.420 60.000 8.94 0.00 0.00 4.81
349 350 1.977009 GAAAGAAACAGGGCCGGGG 60.977 63.158 8.94 0.00 0.00 5.73
350 351 0.326927 TAGAAAGAAACAGGGCCGGG 59.673 55.000 8.94 2.25 0.00 5.73
351 352 1.450025 GTAGAAAGAAACAGGGCCGG 58.550 55.000 0.79 0.79 0.00 6.13
352 353 1.271163 TGGTAGAAAGAAACAGGGCCG 60.271 52.381 0.00 0.00 0.00 6.13
353 354 2.579410 TGGTAGAAAGAAACAGGGCC 57.421 50.000 0.00 0.00 0.00 5.80
354 355 3.367395 GCAATGGTAGAAAGAAACAGGGC 60.367 47.826 0.00 0.00 0.00 5.19
355 356 3.193479 GGCAATGGTAGAAAGAAACAGGG 59.807 47.826 0.00 0.00 0.00 4.45
356 357 3.826157 TGGCAATGGTAGAAAGAAACAGG 59.174 43.478 0.00 0.00 0.00 4.00
357 358 5.404946 CATGGCAATGGTAGAAAGAAACAG 58.595 41.667 0.00 0.00 0.00 3.16
358 359 4.321899 GCATGGCAATGGTAGAAAGAAACA 60.322 41.667 2.54 0.00 34.09 2.83
359 360 4.176271 GCATGGCAATGGTAGAAAGAAAC 58.824 43.478 2.54 0.00 34.09 2.78
360 361 3.831333 TGCATGGCAATGGTAGAAAGAAA 59.169 39.130 2.54 0.00 34.76 2.52
361 362 3.429492 TGCATGGCAATGGTAGAAAGAA 58.571 40.909 2.54 0.00 34.76 2.52
362 363 3.084536 TGCATGGCAATGGTAGAAAGA 57.915 42.857 2.54 0.00 34.76 2.52
363 364 3.713288 CATGCATGGCAATGGTAGAAAG 58.287 45.455 19.40 0.00 43.62 2.62
364 365 2.159071 GCATGCATGGCAATGGTAGAAA 60.159 45.455 27.34 0.00 43.62 2.52
365 366 1.409790 GCATGCATGGCAATGGTAGAA 59.590 47.619 27.34 0.00 43.62 2.10
366 367 1.034356 GCATGCATGGCAATGGTAGA 58.966 50.000 27.34 0.00 43.62 2.59
367 368 0.318360 CGCATGCATGGCAATGGTAG 60.318 55.000 27.34 0.00 43.62 3.18
368 369 1.734748 CGCATGCATGGCAATGGTA 59.265 52.632 27.34 0.00 43.62 3.25
369 370 2.497293 CGCATGCATGGCAATGGT 59.503 55.556 27.34 0.00 43.62 3.55
370 371 2.964925 GCGCATGCATGGCAATGG 60.965 61.111 27.34 8.63 43.62 3.16
371 372 2.964925 GGCGCATGCATGGCAATG 60.965 61.111 29.23 9.83 43.62 2.82
372 373 4.230002 GGGCGCATGCATGGCAAT 62.230 61.111 29.23 0.00 43.62 3.56
389 390 0.107017 ATCATTTCTGCCCTGGACGG 60.107 55.000 0.00 0.00 0.00 4.79
390 391 1.019673 CATCATTTCTGCCCTGGACG 58.980 55.000 0.00 0.00 0.00 4.79
391 392 2.425143 TCATCATTTCTGCCCTGGAC 57.575 50.000 0.00 0.00 0.00 4.02
392 393 2.510800 TCATCATCATTTCTGCCCTGGA 59.489 45.455 0.00 0.00 0.00 3.86
393 394 2.621998 GTCATCATCATTTCTGCCCTGG 59.378 50.000 0.00 0.00 0.00 4.45
394 395 3.552875 AGTCATCATCATTTCTGCCCTG 58.447 45.455 0.00 0.00 0.00 4.45
395 396 3.743584 CGAGTCATCATCATTTCTGCCCT 60.744 47.826 0.00 0.00 0.00 5.19
396 397 2.547211 CGAGTCATCATCATTTCTGCCC 59.453 50.000 0.00 0.00 0.00 5.36
397 398 3.201290 ACGAGTCATCATCATTTCTGCC 58.799 45.455 0.00 0.00 0.00 4.85
398 399 4.093998 ACAACGAGTCATCATCATTTCTGC 59.906 41.667 0.00 0.00 0.00 4.26
399 400 5.791367 ACAACGAGTCATCATCATTTCTG 57.209 39.130 0.00 0.00 0.00 3.02
413 414 1.374252 GGCGGACATGACAACGAGT 60.374 57.895 0.00 0.00 0.00 4.18
414 415 1.078759 GAGGCGGACATGACAACGAG 61.079 60.000 0.00 0.00 0.00 4.18
415 416 1.080093 GAGGCGGACATGACAACGA 60.080 57.895 0.00 0.00 0.00 3.85
416 417 0.740868 ATGAGGCGGACATGACAACG 60.741 55.000 0.00 0.00 0.00 4.10
417 418 1.453155 AATGAGGCGGACATGACAAC 58.547 50.000 0.00 0.00 0.00 3.32
418 419 2.083774 GAAATGAGGCGGACATGACAA 58.916 47.619 0.00 0.00 0.00 3.18
419 420 1.678728 GGAAATGAGGCGGACATGACA 60.679 52.381 0.00 0.00 0.00 3.58
420 421 1.017387 GGAAATGAGGCGGACATGAC 58.983 55.000 0.00 0.00 0.00 3.06
421 422 0.107214 GGGAAATGAGGCGGACATGA 60.107 55.000 0.00 0.00 0.00 3.07
422 423 0.394216 TGGGAAATGAGGCGGACATG 60.394 55.000 0.00 0.00 0.00 3.21
423 424 0.394352 GTGGGAAATGAGGCGGACAT 60.394 55.000 0.00 0.00 0.00 3.06
424 425 1.002624 GTGGGAAATGAGGCGGACA 60.003 57.895 0.00 0.00 0.00 4.02
425 426 0.608035 TTGTGGGAAATGAGGCGGAC 60.608 55.000 0.00 0.00 0.00 4.79
426 427 0.111446 TTTGTGGGAAATGAGGCGGA 59.889 50.000 0.00 0.00 0.00 5.54
427 428 0.965439 TTTTGTGGGAAATGAGGCGG 59.035 50.000 0.00 0.00 0.00 6.13
428 429 1.885887 TCTTTTGTGGGAAATGAGGCG 59.114 47.619 0.00 0.00 0.00 5.52
429 430 3.766051 AGATCTTTTGTGGGAAATGAGGC 59.234 43.478 0.00 0.00 0.00 4.70
430 431 4.400567 GGAGATCTTTTGTGGGAAATGAGG 59.599 45.833 0.00 0.00 0.00 3.86
431 432 4.095483 CGGAGATCTTTTGTGGGAAATGAG 59.905 45.833 0.00 0.00 0.00 2.90
432 433 4.009675 CGGAGATCTTTTGTGGGAAATGA 58.990 43.478 0.00 0.00 0.00 2.57
433 434 3.428045 GCGGAGATCTTTTGTGGGAAATG 60.428 47.826 0.00 0.00 0.00 2.32
434 435 2.755103 GCGGAGATCTTTTGTGGGAAAT 59.245 45.455 0.00 0.00 0.00 2.17
435 436 2.159382 GCGGAGATCTTTTGTGGGAAA 58.841 47.619 0.00 0.00 0.00 3.13
436 437 1.351017 AGCGGAGATCTTTTGTGGGAA 59.649 47.619 0.00 0.00 0.00 3.97
437 438 0.984230 AGCGGAGATCTTTTGTGGGA 59.016 50.000 0.00 0.00 0.00 4.37
438 439 1.373570 GAGCGGAGATCTTTTGTGGG 58.626 55.000 0.00 0.00 41.28 4.61
439 440 1.339055 TGGAGCGGAGATCTTTTGTGG 60.339 52.381 0.00 0.00 45.45 4.17
440 441 2.099141 TGGAGCGGAGATCTTTTGTG 57.901 50.000 0.00 0.00 45.45 3.33
441 442 3.356529 AATGGAGCGGAGATCTTTTGT 57.643 42.857 0.00 0.00 45.45 2.83
442 443 5.762218 AGATAAATGGAGCGGAGATCTTTTG 59.238 40.000 0.00 0.00 45.45 2.44
443 444 5.934781 AGATAAATGGAGCGGAGATCTTTT 58.065 37.500 0.00 0.00 45.45 2.27
444 445 5.559148 AGATAAATGGAGCGGAGATCTTT 57.441 39.130 0.00 0.00 45.45 2.52
445 446 5.559148 AAGATAAATGGAGCGGAGATCTT 57.441 39.130 0.00 0.00 45.45 2.40
446 447 5.559148 AAAGATAAATGGAGCGGAGATCT 57.441 39.130 0.00 0.00 45.45 2.75
447 448 6.433766 CAAAAAGATAAATGGAGCGGAGATC 58.566 40.000 0.00 0.00 45.39 2.75
448 449 5.221126 GCAAAAAGATAAATGGAGCGGAGAT 60.221 40.000 0.00 0.00 0.00 2.75
449 450 4.096382 GCAAAAAGATAAATGGAGCGGAGA 59.904 41.667 0.00 0.00 0.00 3.71
450 451 4.354587 GCAAAAAGATAAATGGAGCGGAG 58.645 43.478 0.00 0.00 0.00 4.63
451 452 3.130340 GGCAAAAAGATAAATGGAGCGGA 59.870 43.478 0.00 0.00 0.00 5.54
452 453 3.119173 TGGCAAAAAGATAAATGGAGCGG 60.119 43.478 0.00 0.00 0.00 5.52
453 454 4.108699 TGGCAAAAAGATAAATGGAGCG 57.891 40.909 0.00 0.00 0.00 5.03
454 455 4.741676 CGATGGCAAAAAGATAAATGGAGC 59.258 41.667 0.00 0.00 0.00 4.70
455 456 5.745294 CACGATGGCAAAAAGATAAATGGAG 59.255 40.000 0.00 0.00 0.00 3.86
456 457 5.394005 CCACGATGGCAAAAAGATAAATGGA 60.394 40.000 0.00 0.00 0.00 3.41
457 458 4.805192 CCACGATGGCAAAAAGATAAATGG 59.195 41.667 0.00 0.00 0.00 3.16
458 459 5.954434 CCACGATGGCAAAAAGATAAATG 57.046 39.130 0.00 0.00 0.00 2.32
472 473 2.473816 CTACTGTATGTGCCACGATGG 58.526 52.381 0.00 0.00 41.55 3.51
473 474 1.860950 GCTACTGTATGTGCCACGATG 59.139 52.381 0.00 0.00 0.00 3.84
474 475 1.480545 TGCTACTGTATGTGCCACGAT 59.519 47.619 0.00 0.00 0.00 3.73
475 476 0.892063 TGCTACTGTATGTGCCACGA 59.108 50.000 0.00 0.00 0.00 4.35
476 477 1.720805 TTGCTACTGTATGTGCCACG 58.279 50.000 0.00 0.00 0.00 4.94
477 478 4.497473 TTTTTGCTACTGTATGTGCCAC 57.503 40.909 0.00 0.00 0.00 5.01
478 479 5.720371 AATTTTTGCTACTGTATGTGCCA 57.280 34.783 0.00 0.00 0.00 4.92
479 480 8.432359 GTTTTAATTTTTGCTACTGTATGTGCC 58.568 33.333 0.00 0.00 0.00 5.01
480 481 8.973378 TGTTTTAATTTTTGCTACTGTATGTGC 58.027 29.630 0.00 0.00 0.00 4.57
486 487 9.660180 TCCTTTTGTTTTAATTTTTGCTACTGT 57.340 25.926 0.00 0.00 0.00 3.55
488 489 9.325198 CCTCCTTTTGTTTTAATTTTTGCTACT 57.675 29.630 0.00 0.00 0.00 2.57
489 490 9.320352 TCCTCCTTTTGTTTTAATTTTTGCTAC 57.680 29.630 0.00 0.00 0.00 3.58
490 491 9.892130 TTCCTCCTTTTGTTTTAATTTTTGCTA 57.108 25.926 0.00 0.00 0.00 3.49
491 492 8.800370 TTCCTCCTTTTGTTTTAATTTTTGCT 57.200 26.923 0.00 0.00 0.00 3.91
503 504 9.546428 CACATAAAAAGATTTCCTCCTTTTGTT 57.454 29.630 0.00 0.00 40.49 2.83
504 505 8.923270 TCACATAAAAAGATTTCCTCCTTTTGT 58.077 29.630 0.00 0.00 40.49 2.83
505 506 9.196552 GTCACATAAAAAGATTTCCTCCTTTTG 57.803 33.333 0.00 0.00 40.49 2.44
506 507 8.082242 CGTCACATAAAAAGATTTCCTCCTTTT 58.918 33.333 0.00 0.00 42.42 2.27
507 508 7.230712 ACGTCACATAAAAAGATTTCCTCCTTT 59.769 33.333 0.00 0.00 34.39 3.11
508 509 6.715264 ACGTCACATAAAAAGATTTCCTCCTT 59.285 34.615 0.00 0.00 0.00 3.36
509 510 6.149474 CACGTCACATAAAAAGATTTCCTCCT 59.851 38.462 0.00 0.00 0.00 3.69
510 511 6.314784 CACGTCACATAAAAAGATTTCCTCC 58.685 40.000 0.00 0.00 0.00 4.30
511 512 5.795441 GCACGTCACATAAAAAGATTTCCTC 59.205 40.000 0.00 0.00 0.00 3.71
512 513 5.240623 TGCACGTCACATAAAAAGATTTCCT 59.759 36.000 0.00 0.00 0.00 3.36
513 514 5.457140 TGCACGTCACATAAAAAGATTTCC 58.543 37.500 0.00 0.00 0.00 3.13
514 515 6.142817 ACTGCACGTCACATAAAAAGATTTC 58.857 36.000 0.00 0.00 0.00 2.17
515 516 6.072112 ACTGCACGTCACATAAAAAGATTT 57.928 33.333 0.00 0.00 0.00 2.17
516 517 5.614668 CGACTGCACGTCACATAAAAAGATT 60.615 40.000 14.09 0.00 42.98 2.40
517 518 4.143115 CGACTGCACGTCACATAAAAAGAT 60.143 41.667 14.09 0.00 42.98 2.40
518 519 3.183574 CGACTGCACGTCACATAAAAAGA 59.816 43.478 14.09 0.00 42.98 2.52
519 520 3.183574 TCGACTGCACGTCACATAAAAAG 59.816 43.478 14.09 0.00 42.98 2.27
520 521 3.124560 TCGACTGCACGTCACATAAAAA 58.875 40.909 14.09 0.00 42.98 1.94
521 522 2.745102 TCGACTGCACGTCACATAAAA 58.255 42.857 14.09 0.00 42.98 1.52
522 523 2.425578 TCGACTGCACGTCACATAAA 57.574 45.000 14.09 0.00 42.98 1.40
523 524 2.647529 ATCGACTGCACGTCACATAA 57.352 45.000 14.09 0.00 42.98 1.90
524 525 2.538132 CGTATCGACTGCACGTCACATA 60.538 50.000 14.09 8.17 42.98 2.29
525 526 1.794076 CGTATCGACTGCACGTCACAT 60.794 52.381 14.09 8.88 42.98 3.21
526 527 0.453782 CGTATCGACTGCACGTCACA 60.454 55.000 14.09 0.00 42.98 3.58
527 528 0.453950 ACGTATCGACTGCACGTCAC 60.454 55.000 14.09 5.63 45.05 3.67
528 529 1.077915 TACGTATCGACTGCACGTCA 58.922 50.000 16.44 4.98 45.05 4.35
529 530 1.450717 GTACGTATCGACTGCACGTC 58.549 55.000 16.44 3.24 45.05 4.34
531 532 1.518522 GCGTACGTATCGACTGCACG 61.519 60.000 17.90 9.05 41.32 5.34
532 533 0.247974 AGCGTACGTATCGACTGCAC 60.248 55.000 17.90 0.00 0.00 4.57
533 534 0.247934 CAGCGTACGTATCGACTGCA 60.248 55.000 17.90 0.00 0.00 4.41
534 535 0.928908 CCAGCGTACGTATCGACTGC 60.929 60.000 17.90 7.89 34.16 4.40
535 536 0.928908 GCCAGCGTACGTATCGACTG 60.929 60.000 17.90 13.47 34.73 3.51
536 537 1.354506 GCCAGCGTACGTATCGACT 59.645 57.895 17.90 0.65 0.00 4.18
537 538 1.656569 GGCCAGCGTACGTATCGAC 60.657 63.158 17.90 0.31 0.00 4.20
538 539 2.717485 GGCCAGCGTACGTATCGA 59.283 61.111 17.90 0.00 0.00 3.59
539 540 2.724721 CGGCCAGCGTACGTATCG 60.725 66.667 17.90 10.16 0.00 2.92
540 541 2.354305 CCGGCCAGCGTACGTATC 60.354 66.667 17.90 0.00 0.00 2.24
541 542 4.580551 GCCGGCCAGCGTACGTAT 62.581 66.667 18.11 2.97 0.00 3.06
556 557 2.862674 TATTGCCGGTTCCTGTCGCC 62.863 60.000 1.90 0.00 0.00 5.54
557 558 1.448893 TATTGCCGGTTCCTGTCGC 60.449 57.895 1.90 0.00 0.00 5.19
558 559 0.108329 AGTATTGCCGGTTCCTGTCG 60.108 55.000 1.90 0.00 0.00 4.35
559 560 2.007608 GAAGTATTGCCGGTTCCTGTC 58.992 52.381 1.90 0.00 0.00 3.51
560 561 1.628846 AGAAGTATTGCCGGTTCCTGT 59.371 47.619 1.90 0.00 0.00 4.00
561 562 2.403252 AGAAGTATTGCCGGTTCCTG 57.597 50.000 1.90 0.00 0.00 3.86
562 563 3.434940 AAAGAAGTATTGCCGGTTCCT 57.565 42.857 1.90 0.00 0.00 3.36
563 564 4.514781 AAAAAGAAGTATTGCCGGTTCC 57.485 40.909 1.90 0.00 0.00 3.62
585 586 1.448985 CCGGCTCCGATTCTCAAAAA 58.551 50.000 10.28 0.00 42.83 1.94
586 587 1.024579 GCCGGCTCCGATTCTCAAAA 61.025 55.000 22.15 0.00 42.83 2.44
587 588 1.449601 GCCGGCTCCGATTCTCAAA 60.450 57.895 22.15 0.00 42.83 2.69
588 589 2.178876 TTGCCGGCTCCGATTCTCAA 62.179 55.000 29.70 6.16 42.83 3.02
589 590 1.971505 ATTGCCGGCTCCGATTCTCA 61.972 55.000 29.70 0.00 42.83 3.27
590 591 0.033504 TATTGCCGGCTCCGATTCTC 59.966 55.000 29.70 0.00 42.83 2.87
591 592 0.249911 GTATTGCCGGCTCCGATTCT 60.250 55.000 29.70 5.49 42.83 2.40
592 593 0.249911 AGTATTGCCGGCTCCGATTC 60.250 55.000 29.70 13.47 42.83 2.52
593 594 0.180406 AAGTATTGCCGGCTCCGATT 59.820 50.000 29.70 14.18 42.83 3.34
594 595 0.532862 CAAGTATTGCCGGCTCCGAT 60.533 55.000 29.70 17.74 40.39 4.18
595 596 1.153449 CAAGTATTGCCGGCTCCGA 60.153 57.895 29.70 11.47 40.39 4.55
596 597 3.409856 CAAGTATTGCCGGCTCCG 58.590 61.111 29.70 5.06 40.39 4.63
606 607 1.001633 ACGTGGCGAGGAACAAGTATT 59.998 47.619 0.00 0.00 0.00 1.89
607 608 0.606604 ACGTGGCGAGGAACAAGTAT 59.393 50.000 0.00 0.00 0.00 2.12
608 609 1.246649 TACGTGGCGAGGAACAAGTA 58.753 50.000 0.00 0.00 31.93 2.24
609 610 0.390124 TTACGTGGCGAGGAACAAGT 59.610 50.000 0.00 0.00 33.96 3.16
610 611 1.193874 GTTTACGTGGCGAGGAACAAG 59.806 52.381 0.00 0.00 0.00 3.16
611 612 1.219646 GTTTACGTGGCGAGGAACAA 58.780 50.000 0.00 0.00 0.00 2.83
612 613 0.104487 TGTTTACGTGGCGAGGAACA 59.896 50.000 0.00 0.00 0.00 3.18
613 614 1.219646 TTGTTTACGTGGCGAGGAAC 58.780 50.000 0.00 0.00 0.00 3.62
614 615 1.950828 TTTGTTTACGTGGCGAGGAA 58.049 45.000 0.00 0.00 0.00 3.36
615 616 1.950828 TTTTGTTTACGTGGCGAGGA 58.049 45.000 0.00 0.00 0.00 3.71
616 617 2.759538 TTTTTGTTTACGTGGCGAGG 57.240 45.000 0.00 0.00 0.00 4.63
617 618 2.977169 CCATTTTTGTTTACGTGGCGAG 59.023 45.455 0.00 0.00 0.00 5.03
618 619 2.358267 ACCATTTTTGTTTACGTGGCGA 59.642 40.909 0.00 0.00 0.00 5.54
619 620 2.469516 CACCATTTTTGTTTACGTGGCG 59.530 45.455 0.00 0.00 0.00 5.69
620 621 2.797719 CCACCATTTTTGTTTACGTGGC 59.202 45.455 0.00 0.00 33.51 5.01
621 622 3.181474 ACCCACCATTTTTGTTTACGTGG 60.181 43.478 0.00 0.00 39.19 4.94
622 623 4.048241 ACCCACCATTTTTGTTTACGTG 57.952 40.909 0.00 0.00 0.00 4.49
623 624 4.739587 AACCCACCATTTTTGTTTACGT 57.260 36.364 0.00 0.00 0.00 3.57
624 625 5.834169 AGTAACCCACCATTTTTGTTTACG 58.166 37.500 0.00 0.00 0.00 3.18
625 626 7.944061 ACTAGTAACCCACCATTTTTGTTTAC 58.056 34.615 0.00 0.00 0.00 2.01
626 627 9.810870 ATACTAGTAACCCACCATTTTTGTTTA 57.189 29.630 6.70 0.00 0.00 2.01
627 628 8.581578 CATACTAGTAACCCACCATTTTTGTTT 58.418 33.333 6.70 0.00 0.00 2.83
628 629 7.177744 CCATACTAGTAACCCACCATTTTTGTT 59.822 37.037 6.70 0.00 0.00 2.83
629 630 6.661805 CCATACTAGTAACCCACCATTTTTGT 59.338 38.462 6.70 0.00 0.00 2.83
630 631 6.661805 ACCATACTAGTAACCCACCATTTTTG 59.338 38.462 6.70 0.00 0.00 2.44
631 632 6.796648 ACCATACTAGTAACCCACCATTTTT 58.203 36.000 6.70 0.00 0.00 1.94
632 633 6.397217 ACCATACTAGTAACCCACCATTTT 57.603 37.500 6.70 0.00 0.00 1.82
633 634 6.397217 AACCATACTAGTAACCCACCATTT 57.603 37.500 6.70 0.00 0.00 2.32
634 635 6.675303 ACTAACCATACTAGTAACCCACCATT 59.325 38.462 6.70 0.00 0.00 3.16
635 636 6.207532 ACTAACCATACTAGTAACCCACCAT 58.792 40.000 6.70 0.00 0.00 3.55
636 637 5.592795 ACTAACCATACTAGTAACCCACCA 58.407 41.667 6.70 0.00 0.00 4.17
637 638 6.550938 AACTAACCATACTAGTAACCCACC 57.449 41.667 6.70 0.00 0.00 4.61
638 639 8.853077 AAAAACTAACCATACTAGTAACCCAC 57.147 34.615 6.70 0.00 0.00 4.61
676 677 9.185680 GGGATTAAACAATACTACCACTTGATT 57.814 33.333 0.00 0.00 0.00 2.57
677 678 7.778382 GGGGATTAAACAATACTACCACTTGAT 59.222 37.037 0.00 0.00 0.00 2.57
678 679 7.114095 GGGGATTAAACAATACTACCACTTGA 58.886 38.462 0.00 0.00 0.00 3.02
679 680 6.887545 TGGGGATTAAACAATACTACCACTTG 59.112 38.462 0.00 0.00 0.00 3.16
680 681 6.888088 GTGGGGATTAAACAATACTACCACTT 59.112 38.462 0.00 0.00 40.94 3.16
681 682 6.420638 GTGGGGATTAAACAATACTACCACT 58.579 40.000 0.00 0.00 40.94 4.00
682 683 5.295045 CGTGGGGATTAAACAATACTACCAC 59.705 44.000 0.00 0.00 40.78 4.16
683 684 5.189342 TCGTGGGGATTAAACAATACTACCA 59.811 40.000 0.00 0.00 0.00 3.25
684 685 5.525012 GTCGTGGGGATTAAACAATACTACC 59.475 44.000 0.00 0.00 0.00 3.18
685 686 6.036408 GTGTCGTGGGGATTAAACAATACTAC 59.964 42.308 0.00 0.00 0.00 2.73
686 687 6.108015 GTGTCGTGGGGATTAAACAATACTA 58.892 40.000 0.00 0.00 0.00 1.82
687 688 4.939439 GTGTCGTGGGGATTAAACAATACT 59.061 41.667 0.00 0.00 0.00 2.12
688 689 4.696402 TGTGTCGTGGGGATTAAACAATAC 59.304 41.667 0.00 0.00 0.00 1.89
689 690 4.907809 TGTGTCGTGGGGATTAAACAATA 58.092 39.130 0.00 0.00 0.00 1.90
690 691 3.757270 TGTGTCGTGGGGATTAAACAAT 58.243 40.909 0.00 0.00 0.00 2.71
691 692 3.210232 TGTGTCGTGGGGATTAAACAA 57.790 42.857 0.00 0.00 0.00 2.83
692 693 2.932855 TGTGTCGTGGGGATTAAACA 57.067 45.000 0.00 0.00 0.00 2.83
693 694 3.315749 TGTTTGTGTCGTGGGGATTAAAC 59.684 43.478 0.00 0.00 0.00 2.01
694 695 3.552875 TGTTTGTGTCGTGGGGATTAAA 58.447 40.909 0.00 0.00 0.00 1.52
695 696 3.210232 TGTTTGTGTCGTGGGGATTAA 57.790 42.857 0.00 0.00 0.00 1.40
696 697 2.932855 TGTTTGTGTCGTGGGGATTA 57.067 45.000 0.00 0.00 0.00 1.75
697 698 2.286365 ATGTTTGTGTCGTGGGGATT 57.714 45.000 0.00 0.00 0.00 3.01
698 699 1.885887 CAATGTTTGTGTCGTGGGGAT 59.114 47.619 0.00 0.00 0.00 3.85
699 700 1.313772 CAATGTTTGTGTCGTGGGGA 58.686 50.000 0.00 0.00 0.00 4.81
700 701 0.318614 GCAATGTTTGTGTCGTGGGG 60.319 55.000 0.00 0.00 0.00 4.96
701 702 0.383590 TGCAATGTTTGTGTCGTGGG 59.616 50.000 0.00 0.00 0.00 4.61
702 703 2.030893 AGATGCAATGTTTGTGTCGTGG 60.031 45.455 0.00 0.00 0.00 4.94
703 704 2.975193 CAGATGCAATGTTTGTGTCGTG 59.025 45.455 0.00 0.00 0.00 4.35
704 705 2.605338 GCAGATGCAATGTTTGTGTCGT 60.605 45.455 0.00 0.00 41.59 4.34
705 706 1.980844 GCAGATGCAATGTTTGTGTCG 59.019 47.619 0.00 0.00 41.59 4.35
737 738 7.653767 AGTGACCTACAGTAAATTTTTCTCG 57.346 36.000 0.00 0.00 0.00 4.04
765 767 3.194542 CCCAAACTGTCAACCAACTCAAA 59.805 43.478 0.00 0.00 0.00 2.69
787 789 3.602483 TGGGTATTTTGAAGTAGCGGTC 58.398 45.455 0.00 0.00 0.00 4.79
791 793 6.402875 CCGTAGTTTGGGTATTTTGAAGTAGC 60.403 42.308 0.00 0.00 0.00 3.58
818 820 1.666553 CCCTTGCGCAAGTACGTGA 60.667 57.895 39.50 11.55 36.72 4.35
896 898 4.648626 AAAGCGAGCTGGCAGCCA 62.649 61.111 34.33 15.23 43.77 4.75
987 1045 2.803670 CGCATGACGTCGACGGTT 60.804 61.111 37.89 21.38 44.95 4.44
1015 1074 1.592223 CGAGGGAGCGGAGAAACTT 59.408 57.895 0.00 0.00 0.00 2.66
1078 1143 3.044305 GTTCTTGCGGACGCTGCT 61.044 61.111 18.04 0.00 42.51 4.24
1234 1301 2.737376 GTCGGGCTTGACGTCCAC 60.737 66.667 14.12 1.80 37.17 4.02
1339 1849 0.773644 AGAGCATGTGAACCCCTTGT 59.226 50.000 0.00 0.00 0.00 3.16
1367 2073 2.093816 TGCATCAGAGTAGTTGAGCAGG 60.094 50.000 0.00 0.00 30.67 4.85
1411 2117 3.390135 TCTTCAACTCCAATCGTGTCAC 58.610 45.455 0.00 0.00 0.00 3.67
1485 2191 7.425003 TCTTCCATATCCTCATCATCCTCATA 58.575 38.462 0.00 0.00 0.00 2.15
1592 2406 6.421801 GCTCAAGACATAAATGCAAGTTTGTT 59.578 34.615 0.00 0.00 0.00 2.83
1710 2524 8.955388 TGAATATATCAGAGCTCTAAGCTACAG 58.045 37.037 17.75 1.02 42.14 2.74
1750 2564 6.014327 ACATCATTTCCCAGTTAAACAAGCAT 60.014 34.615 0.00 0.00 0.00 3.79
1782 2596 5.619981 GCCAAATGTGTCAGTAACAAGGATC 60.620 44.000 0.00 0.00 40.31 3.36
1882 2696 7.801104 TGAGAAACATGCAAAGGGAGTATATA 58.199 34.615 0.00 0.00 0.00 0.86
1902 2716 8.885693 ACAGTATATCTAGGCATACATGAGAA 57.114 34.615 0.00 0.00 31.33 2.87
1903 2717 9.975218 TTACAGTATATCTAGGCATACATGAGA 57.025 33.333 0.00 0.00 31.33 3.27
1911 2725 9.712305 GAACATGTTTACAGTATATCTAGGCAT 57.288 33.333 13.36 0.00 0.00 4.40
1912 2726 8.700973 TGAACATGTTTACAGTATATCTAGGCA 58.299 33.333 13.36 0.00 0.00 4.75
1913 2727 9.712305 ATGAACATGTTTACAGTATATCTAGGC 57.288 33.333 13.36 0.00 0.00 3.93
1920 2734 9.619316 GCAAACAATGAACATGTTTACAGTATA 57.381 29.630 13.36 0.00 46.30 1.47
1921 2735 8.359642 AGCAAACAATGAACATGTTTACAGTAT 58.640 29.630 13.36 0.00 46.30 2.12
1922 2736 7.711846 AGCAAACAATGAACATGTTTACAGTA 58.288 30.769 13.36 0.00 46.30 2.74
1923 2737 6.572519 AGCAAACAATGAACATGTTTACAGT 58.427 32.000 13.36 8.01 46.30 3.55
1924 2738 6.696583 TGAGCAAACAATGAACATGTTTACAG 59.303 34.615 13.36 7.37 46.30 2.74
1925 2739 6.567959 TGAGCAAACAATGAACATGTTTACA 58.432 32.000 13.36 7.50 46.30 2.41
1926 2740 7.169645 ACATGAGCAAACAATGAACATGTTTAC 59.830 33.333 13.36 1.09 46.30 2.01
1927 2741 7.208777 ACATGAGCAAACAATGAACATGTTTA 58.791 30.769 13.36 9.29 46.30 2.01
1929 2743 5.603596 ACATGAGCAAACAATGAACATGTT 58.396 33.333 11.78 11.78 45.64 2.71
1930 2744 5.204409 ACATGAGCAAACAATGAACATGT 57.796 34.783 0.00 0.00 44.45 3.21
1931 2745 6.237728 GCATACATGAGCAAACAATGAACATG 60.238 38.462 0.00 0.00 43.31 3.21
1932 2746 5.808540 GCATACATGAGCAAACAATGAACAT 59.191 36.000 0.00 0.00 0.00 2.71
1933 2747 5.162794 GCATACATGAGCAAACAATGAACA 58.837 37.500 0.00 0.00 0.00 3.18
1934 2748 4.563976 GGCATACATGAGCAAACAATGAAC 59.436 41.667 0.00 0.00 0.00 3.18
1935 2749 4.463539 AGGCATACATGAGCAAACAATGAA 59.536 37.500 0.00 0.00 0.00 2.57
1936 2750 4.018490 AGGCATACATGAGCAAACAATGA 58.982 39.130 0.00 0.00 0.00 2.57
1937 2751 4.380841 AGGCATACATGAGCAAACAATG 57.619 40.909 0.00 0.00 0.00 2.82
1938 2752 5.297776 GTCTAGGCATACATGAGCAAACAAT 59.702 40.000 0.00 0.00 0.00 2.71
1939 2753 4.635765 GTCTAGGCATACATGAGCAAACAA 59.364 41.667 0.00 0.00 0.00 2.83
1940 2754 4.191544 GTCTAGGCATACATGAGCAAACA 58.808 43.478 0.00 0.00 0.00 2.83
1941 2755 4.191544 TGTCTAGGCATACATGAGCAAAC 58.808 43.478 0.00 0.00 0.00 2.93
1942 2756 4.486125 TGTCTAGGCATACATGAGCAAA 57.514 40.909 0.00 0.00 0.00 3.68
1943 2757 4.445453 CTTGTCTAGGCATACATGAGCAA 58.555 43.478 0.00 0.00 0.00 3.91
1944 2758 3.181462 CCTTGTCTAGGCATACATGAGCA 60.181 47.826 0.00 0.00 37.17 4.26
1945 2759 3.397482 CCTTGTCTAGGCATACATGAGC 58.603 50.000 0.00 0.00 37.17 4.26
1957 2771 4.275689 TGCAAAATGTGTCACCTTGTCTAG 59.724 41.667 0.00 0.00 0.00 2.43
1958 2772 4.203226 TGCAAAATGTGTCACCTTGTCTA 58.797 39.130 0.00 0.00 0.00 2.59
1959 2773 3.023119 TGCAAAATGTGTCACCTTGTCT 58.977 40.909 0.00 0.00 0.00 3.41
1960 2774 3.181487 ACTGCAAAATGTGTCACCTTGTC 60.181 43.478 0.00 0.39 0.00 3.18
1961 2775 2.760092 ACTGCAAAATGTGTCACCTTGT 59.240 40.909 0.00 0.00 0.00 3.16
1962 2776 3.067180 AGACTGCAAAATGTGTCACCTTG 59.933 43.478 0.00 3.19 32.41 3.61
1963 2777 3.067180 CAGACTGCAAAATGTGTCACCTT 59.933 43.478 0.00 0.00 32.41 3.50
1964 2778 2.620115 CAGACTGCAAAATGTGTCACCT 59.380 45.455 0.00 0.00 32.41 4.00
1965 2779 2.287788 CCAGACTGCAAAATGTGTCACC 60.288 50.000 0.00 0.00 32.41 4.02
1966 2780 2.618241 TCCAGACTGCAAAATGTGTCAC 59.382 45.455 0.00 0.00 32.41 3.67
1967 2781 2.880268 CTCCAGACTGCAAAATGTGTCA 59.120 45.455 0.00 0.00 32.41 3.58
1968 2782 2.880890 ACTCCAGACTGCAAAATGTGTC 59.119 45.455 0.00 0.00 0.00 3.67
1969 2783 2.936202 ACTCCAGACTGCAAAATGTGT 58.064 42.857 0.00 0.00 0.00 3.72
1970 2784 4.318332 TCTACTCCAGACTGCAAAATGTG 58.682 43.478 0.00 0.00 0.00 3.21
1971 2785 4.623932 TCTACTCCAGACTGCAAAATGT 57.376 40.909 0.00 0.00 0.00 2.71
1982 2796 5.316167 ACAATGCAAAATGTCTACTCCAGA 58.684 37.500 0.00 0.00 0.00 3.86
1983 2797 5.633830 ACAATGCAAAATGTCTACTCCAG 57.366 39.130 0.00 0.00 0.00 3.86
1984 2798 5.769662 AGAACAATGCAAAATGTCTACTCCA 59.230 36.000 0.00 0.00 0.00 3.86
1985 2799 6.072508 TCAGAACAATGCAAAATGTCTACTCC 60.073 38.462 0.00 0.00 0.00 3.85
1986 2800 6.902341 TCAGAACAATGCAAAATGTCTACTC 58.098 36.000 0.00 0.00 0.00 2.59
1987 2801 6.882610 TCAGAACAATGCAAAATGTCTACT 57.117 33.333 0.00 0.00 0.00 2.57
1988 2802 7.596248 ACATTCAGAACAATGCAAAATGTCTAC 59.404 33.333 0.00 0.00 37.28 2.59
1989 2803 7.595875 CACATTCAGAACAATGCAAAATGTCTA 59.404 33.333 0.00 0.00 37.28 2.59
1990 2804 6.422701 CACATTCAGAACAATGCAAAATGTCT 59.577 34.615 0.00 0.00 37.28 3.41
1991 2805 6.421501 TCACATTCAGAACAATGCAAAATGTC 59.578 34.615 0.00 0.00 37.28 3.06
1992 2806 6.282167 TCACATTCAGAACAATGCAAAATGT 58.718 32.000 0.00 0.00 37.28 2.71
1993 2807 6.772770 TCACATTCAGAACAATGCAAAATG 57.227 33.333 0.00 0.00 37.28 2.32
1994 2808 7.496591 AGTTTCACATTCAGAACAATGCAAAAT 59.503 29.630 0.00 0.00 37.28 1.82
1995 2809 6.817641 AGTTTCACATTCAGAACAATGCAAAA 59.182 30.769 0.00 0.00 37.28 2.44
1996 2810 6.256104 CAGTTTCACATTCAGAACAATGCAAA 59.744 34.615 0.00 0.00 37.28 3.68
1997 2811 5.749588 CAGTTTCACATTCAGAACAATGCAA 59.250 36.000 0.00 0.00 37.28 4.08
1998 2812 5.283294 CAGTTTCACATTCAGAACAATGCA 58.717 37.500 0.00 0.00 37.28 3.96
1999 2813 4.149396 GCAGTTTCACATTCAGAACAATGC 59.851 41.667 0.00 0.00 37.28 3.56
2000 2814 5.283294 TGCAGTTTCACATTCAGAACAATG 58.717 37.500 0.00 0.00 39.35 2.82
2001 2815 5.518848 TGCAGTTTCACATTCAGAACAAT 57.481 34.783 0.00 0.00 0.00 2.71
2002 2816 4.979943 TGCAGTTTCACATTCAGAACAA 57.020 36.364 0.00 0.00 0.00 2.83
2003 2817 5.518848 AATGCAGTTTCACATTCAGAACA 57.481 34.783 0.00 0.00 30.81 3.18
2004 2818 7.272084 GTCATAATGCAGTTTCACATTCAGAAC 59.728 37.037 0.00 0.00 37.63 3.01
2105 2919 6.128336 GCATTAACATGAGGCTCATATCTCAC 60.128 42.308 28.39 12.53 42.00 3.51
2116 2930 1.406539 CAGGTGGCATTAACATGAGGC 59.593 52.381 0.00 0.00 31.11 4.70
2165 2979 3.134458 GAGAGACAAGGTGACACCAAAG 58.866 50.000 26.30 16.72 41.95 2.77
2199 3013 6.590292 TCATAAGAAAATGACAAGGTCGACTC 59.410 38.462 16.46 5.51 34.95 3.36
2241 3057 9.569167 CGTAGTCTAGTGAAATAAACTCAATCA 57.431 33.333 0.00 0.00 0.00 2.57
2356 3172 3.452264 AGACTGGAGTAGTATGCATTGCA 59.548 43.478 14.72 14.72 40.94 4.08
2370 3186 4.090090 TCCTTTGGAGTTCTAGACTGGAG 58.910 47.826 0.00 0.00 39.19 3.86
2371 3187 4.090090 CTCCTTTGGAGTTCTAGACTGGA 58.910 47.826 5.50 0.00 44.25 3.86
2372 3188 4.464069 CTCCTTTGGAGTTCTAGACTGG 57.536 50.000 5.50 0.00 44.25 4.00
2384 3200 6.062258 CTCCTTGGTTAATACTCCTTTGGA 57.938 41.667 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.