Multiple sequence alignment - TraesCS2A01G280200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G280200 chr2A 100.000 4850 0 0 1 4850 468301528 468296679 0.000000e+00 8957
1 TraesCS2A01G280200 chr2A 95.556 90 2 2 4648 4735 71206689 71206600 5.060000e-30 143
2 TraesCS2A01G280200 chr2A 95.556 90 2 2 4648 4735 71259319 71259230 5.060000e-30 143
3 TraesCS2A01G280200 chr6B 94.808 4295 167 26 72 4350 144954577 144958831 0.000000e+00 6645
4 TraesCS2A01G280200 chr6B 90.000 110 7 3 4643 4750 672159261 672159154 6.550000e-29 139
5 TraesCS2A01G280200 chr6A 95.547 3773 132 20 603 4351 137335400 137339160 0.000000e+00 6004
6 TraesCS2A01G280200 chr6A 94.639 2947 114 20 78 2992 201756399 201759333 0.000000e+00 4527
7 TraesCS2A01G280200 chr6A 97.783 1624 30 5 2470 4088 577735415 577737037 0.000000e+00 2795
8 TraesCS2A01G280200 chr6A 97.727 88 2 0 3023 3110 201759331 201759418 8.410000e-33 152
9 TraesCS2A01G280200 chr2D 93.528 4033 198 23 71 4088 465150263 465154247 0.000000e+00 5943
10 TraesCS2A01G280200 chr2D 93.377 302 17 1 4350 4651 350753716 350753418 1.240000e-120 444
11 TraesCS2A01G280200 chr2D 96.581 117 4 0 4732 4848 350753419 350753303 1.380000e-45 195
12 TraesCS2A01G280200 chr2D 97.260 73 2 0 1 73 350753816 350753744 1.830000e-24 124
13 TraesCS2A01G280200 chr4A 94.780 3755 146 20 610 4352 583958291 583954575 0.000000e+00 5803
14 TraesCS2A01G280200 chr4A 94.852 2156 94 9 2203 4352 583960985 583958841 0.000000e+00 3350
15 TraesCS2A01G280200 chr4A 93.957 877 29 12 610 1486 583962920 583962068 0.000000e+00 1304
16 TraesCS2A01G280200 chr4A 98.261 115 2 0 76 190 583963059 583962945 8.230000e-48 202
17 TraesCS2A01G280200 chr2B 94.277 3792 169 30 603 4362 289896716 289892941 0.000000e+00 5757
18 TraesCS2A01G280200 chr2B 92.058 277 18 2 4350 4626 416822963 416822691 2.120000e-103 387
19 TraesCS2A01G280200 chr2B 96.581 117 4 0 4732 4848 416822678 416822562 1.380000e-45 195
20 TraesCS2A01G280200 chr2B 98.630 73 1 0 1 73 416823032 416822960 3.940000e-26 130
21 TraesCS2A01G280200 chr7A 95.065 2979 100 18 76 3043 577208616 577211558 0.000000e+00 4643
22 TraesCS2A01G280200 chr7A 94.546 2952 120 21 72 2992 654302831 654305772 0.000000e+00 4521
23 TraesCS2A01G280200 chr7A 94.602 1167 57 5 3188 4350 577211951 577213115 0.000000e+00 1801
24 TraesCS2A01G280200 chr3D 97.927 1833 31 5 1307 3134 18300171 18302001 0.000000e+00 3168
25 TraesCS2A01G280200 chr3D 98.270 1156 18 2 3197 4352 18302002 18303155 0.000000e+00 2023
26 TraesCS2A01G280200 chrUn 94.455 1587 54 20 186 1764 389146193 389147753 0.000000e+00 2412
27 TraesCS2A01G280200 chr7B 96.667 90 1 2 4645 4733 92400575 92400663 1.090000e-31 148
28 TraesCS2A01G280200 chr7B 93.069 101 4 3 4645 4742 536260638 536260538 1.410000e-30 145
29 TraesCS2A01G280200 chr5D 92.233 103 6 2 4633 4733 491871569 491871671 1.410000e-30 145
30 TraesCS2A01G280200 chr3B 93.069 101 4 3 4645 4742 23095356 23095256 1.410000e-30 145
31 TraesCS2A01G280200 chr3B 85.185 135 11 9 4604 4733 11978728 11978598 3.940000e-26 130
32 TraesCS2A01G280200 chr4B 92.308 104 2 6 4650 4749 592079807 592079908 5.060000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G280200 chr2A 468296679 468301528 4849 True 8957.000000 8957 100.000000 1 4850 1 chr2A.!!$R3 4849
1 TraesCS2A01G280200 chr6B 144954577 144958831 4254 False 6645.000000 6645 94.808000 72 4350 1 chr6B.!!$F1 4278
2 TraesCS2A01G280200 chr6A 137335400 137339160 3760 False 6004.000000 6004 95.547000 603 4351 1 chr6A.!!$F1 3748
3 TraesCS2A01G280200 chr6A 577735415 577737037 1622 False 2795.000000 2795 97.783000 2470 4088 1 chr6A.!!$F2 1618
4 TraesCS2A01G280200 chr6A 201756399 201759418 3019 False 2339.500000 4527 96.183000 78 3110 2 chr6A.!!$F3 3032
5 TraesCS2A01G280200 chr2D 465150263 465154247 3984 False 5943.000000 5943 93.528000 71 4088 1 chr2D.!!$F1 4017
6 TraesCS2A01G280200 chr2D 350753303 350753816 513 True 254.333333 444 95.739333 1 4848 3 chr2D.!!$R1 4847
7 TraesCS2A01G280200 chr4A 583954575 583963059 8484 True 2664.750000 5803 95.462500 76 4352 4 chr4A.!!$R1 4276
8 TraesCS2A01G280200 chr2B 289892941 289896716 3775 True 5757.000000 5757 94.277000 603 4362 1 chr2B.!!$R1 3759
9 TraesCS2A01G280200 chr7A 654302831 654305772 2941 False 4521.000000 4521 94.546000 72 2992 1 chr7A.!!$F1 2920
10 TraesCS2A01G280200 chr7A 577208616 577213115 4499 False 3222.000000 4643 94.833500 76 4350 2 chr7A.!!$F2 4274
11 TraesCS2A01G280200 chr3D 18300171 18303155 2984 False 2595.500000 3168 98.098500 1307 4352 2 chr3D.!!$F1 3045
12 TraesCS2A01G280200 chrUn 389146193 389147753 1560 False 2412.000000 2412 94.455000 186 1764 1 chrUn.!!$F1 1578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 3807 0.984230 GAACCAGACCAGATCCACCA 59.016 55.000 0.0 0.0 0.00 4.17 F
2071 6379 1.268899 CACTAAGGACAACGGTCGAGT 59.731 52.381 0.0 0.0 45.28 4.18 F
2455 6763 5.132897 TCCATGTTTAGACATTTTGTGCC 57.867 39.130 0.0 0.0 43.92 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2261 6569 0.464735 ATCACTCTCTCGGTCGGAGG 60.465 60.000 7.50 0.0 43.34 4.30 R
2881 7194 1.341531 CGAAACCATATCCGCTCCTCT 59.658 52.381 0.00 0.0 0.00 3.69 R
4430 8996 0.103937 GAGAGAGGCCGGATGACAAG 59.896 60.000 5.05 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
231 3068 1.674057 CGCTCACTTTCCCCTCACT 59.326 57.895 0.00 0.00 0.00 3.41
247 3084 2.429930 CTGTTCGCCCCAACAGGA 59.570 61.111 6.79 0.00 46.57 3.86
396 3807 0.984230 GAACCAGACCAGATCCACCA 59.016 55.000 0.00 0.00 0.00 4.17
480 3988 1.836999 TACCCAATCGCCTGCAGTGT 61.837 55.000 13.81 0.00 0.00 3.55
541 4049 1.315690 TTCTAGATGCGAGGGGTACG 58.684 55.000 0.00 0.00 0.00 3.67
665 4900 7.601508 ACGGTTCAGAGTTATTTTAGTACCTTG 59.398 37.037 0.00 0.00 0.00 3.61
785 5022 3.636231 CACGGTGGGAGGGCTGAA 61.636 66.667 0.00 0.00 0.00 3.02
873 5114 4.588951 ACAATAGAAGTCACACACCTCTGA 59.411 41.667 0.00 0.00 0.00 3.27
877 5118 5.808366 AGAAGTCACACACCTCTGAATAA 57.192 39.130 0.00 0.00 0.00 1.40
878 5119 5.542779 AGAAGTCACACACCTCTGAATAAC 58.457 41.667 0.00 0.00 0.00 1.89
880 5121 5.552870 AGTCACACACCTCTGAATAACTT 57.447 39.130 0.00 0.00 0.00 2.66
881 5122 6.665992 AGTCACACACCTCTGAATAACTTA 57.334 37.500 0.00 0.00 0.00 2.24
882 5123 7.246171 AGTCACACACCTCTGAATAACTTAT 57.754 36.000 0.00 0.00 0.00 1.73
883 5124 8.362464 AGTCACACACCTCTGAATAACTTATA 57.638 34.615 0.00 0.00 0.00 0.98
884 5125 8.982723 AGTCACACACCTCTGAATAACTTATAT 58.017 33.333 0.00 0.00 0.00 0.86
1139 5438 4.021368 AGCTAAACGTGTCAAGTATGGTCT 60.021 41.667 0.00 0.00 0.00 3.85
1416 5715 9.654663 GAGACAGTGAGTAGGTATTTTAACATT 57.345 33.333 0.00 0.00 0.00 2.71
1428 5727 5.950758 ATTTTAACATTGTCCTACGTGCA 57.049 34.783 0.00 0.00 0.00 4.57
1843 6149 6.418057 TCCAGAAGGTAATTGCACATTTTT 57.582 33.333 0.00 0.00 35.89 1.94
2035 6342 2.301346 ACCTGTCCAAAAGAGCTGTTG 58.699 47.619 0.00 0.00 0.00 3.33
2071 6379 1.268899 CACTAAGGACAACGGTCGAGT 59.731 52.381 0.00 0.00 45.28 4.18
2455 6763 5.132897 TCCATGTTTAGACATTTTGTGCC 57.867 39.130 0.00 0.00 43.92 5.01
2881 7194 4.844349 AGTGGATAAAGCTAGCAAAGGA 57.156 40.909 18.83 0.00 0.00 3.36
3127 7441 7.871853 ACCACTGTCAAAATATTCACTTACAC 58.128 34.615 0.00 0.00 0.00 2.90
3783 8344 3.058224 GCGTCCAGACTTTTAATGCTTGT 60.058 43.478 0.00 0.00 0.00 3.16
3819 8380 1.623081 CGCACAAGTACGACGGCAAT 61.623 55.000 0.00 0.00 0.00 3.56
3891 8452 4.429108 TCTTTTGGCAAGTGCTTTTGTAC 58.571 39.130 0.00 0.00 41.70 2.90
3897 8458 3.120649 GGCAAGTGCTTTTGTACTCTACG 60.121 47.826 2.85 0.00 44.55 3.51
4112 8676 7.066142 AGTAAATTATGCCCATGGTATGACAA 58.934 34.615 11.73 0.00 0.00 3.18
4353 8919 3.698040 CTGCAAACCAATCAGCCTCTATT 59.302 43.478 0.00 0.00 0.00 1.73
4355 8921 4.527816 TGCAAACCAATCAGCCTCTATTTT 59.472 37.500 0.00 0.00 0.00 1.82
4356 8922 5.105063 GCAAACCAATCAGCCTCTATTTTC 58.895 41.667 0.00 0.00 0.00 2.29
4362 8928 7.357471 ACCAATCAGCCTCTATTTTCCTATTT 58.643 34.615 0.00 0.00 0.00 1.40
4363 8929 8.502738 ACCAATCAGCCTCTATTTTCCTATTTA 58.497 33.333 0.00 0.00 0.00 1.40
4364 8930 9.525826 CCAATCAGCCTCTATTTTCCTATTTAT 57.474 33.333 0.00 0.00 0.00 1.40
4367 8933 9.746457 ATCAGCCTCTATTTTCCTATTTATTCC 57.254 33.333 0.00 0.00 0.00 3.01
4368 8934 8.164070 TCAGCCTCTATTTTCCTATTTATTCCC 58.836 37.037 0.00 0.00 0.00 3.97
4369 8935 8.166726 CAGCCTCTATTTTCCTATTTATTCCCT 58.833 37.037 0.00 0.00 0.00 4.20
4370 8936 9.406662 AGCCTCTATTTTCCTATTTATTCCCTA 57.593 33.333 0.00 0.00 0.00 3.53
4371 8937 9.451002 GCCTCTATTTTCCTATTTATTCCCTAC 57.549 37.037 0.00 0.00 0.00 3.18
4377 8943 9.642343 ATTTTCCTATTTATTCCCTACTCAACC 57.358 33.333 0.00 0.00 0.00 3.77
4378 8944 8.401955 TTTCCTATTTATTCCCTACTCAACCT 57.598 34.615 0.00 0.00 0.00 3.50
4379 8945 8.401955 TTCCTATTTATTCCCTACTCAACCTT 57.598 34.615 0.00 0.00 0.00 3.50
4380 8946 7.802117 TCCTATTTATTCCCTACTCAACCTTG 58.198 38.462 0.00 0.00 0.00 3.61
4381 8947 6.998673 CCTATTTATTCCCTACTCAACCTTGG 59.001 42.308 0.00 0.00 0.00 3.61
4382 8948 5.853572 TTTATTCCCTACTCAACCTTGGT 57.146 39.130 0.00 0.00 0.00 3.67
4383 8949 6.956102 TTTATTCCCTACTCAACCTTGGTA 57.044 37.500 0.00 0.00 0.00 3.25
4384 8950 4.838904 ATTCCCTACTCAACCTTGGTAC 57.161 45.455 0.00 0.00 0.00 3.34
4385 8951 3.263369 TCCCTACTCAACCTTGGTACA 57.737 47.619 0.00 0.00 0.00 2.90
4407 8973 9.827411 GTACAAGTACCAATGAAATTTCTCTTC 57.173 33.333 18.64 4.10 31.22 2.87
4408 8974 8.463930 ACAAGTACCAATGAAATTTCTCTTCA 57.536 30.769 18.64 0.00 31.22 3.02
4409 8975 9.082313 ACAAGTACCAATGAAATTTCTCTTCAT 57.918 29.630 18.64 1.85 43.70 2.57
4410 8976 9.350357 CAAGTACCAATGAAATTTCTCTTCATG 57.650 33.333 18.64 8.51 41.56 3.07
4411 8977 7.542025 AGTACCAATGAAATTTCTCTTCATGC 58.458 34.615 18.64 4.76 41.56 4.06
4412 8978 6.349243 ACCAATGAAATTTCTCTTCATGCA 57.651 33.333 18.64 0.00 41.56 3.96
4413 8979 6.942976 ACCAATGAAATTTCTCTTCATGCAT 58.057 32.000 18.64 0.00 41.56 3.96
4414 8980 7.039882 ACCAATGAAATTTCTCTTCATGCATC 58.960 34.615 18.64 0.00 41.56 3.91
4415 8981 6.479001 CCAATGAAATTTCTCTTCATGCATCC 59.521 38.462 18.64 0.00 41.56 3.51
4416 8982 7.265673 CAATGAAATTTCTCTTCATGCATCCT 58.734 34.615 18.64 0.00 41.56 3.24
4417 8983 8.410912 CAATGAAATTTCTCTTCATGCATCCTA 58.589 33.333 18.64 0.00 41.56 2.94
4418 8984 7.563888 TGAAATTTCTCTTCATGCATCCTAG 57.436 36.000 18.64 0.00 0.00 3.02
4419 8985 7.114754 TGAAATTTCTCTTCATGCATCCTAGT 58.885 34.615 18.64 0.00 0.00 2.57
4420 8986 7.281774 TGAAATTTCTCTTCATGCATCCTAGTC 59.718 37.037 18.64 0.00 0.00 2.59
4421 8987 4.679373 TTCTCTTCATGCATCCTAGTCC 57.321 45.455 0.00 0.00 0.00 3.85
4422 8988 2.968574 TCTCTTCATGCATCCTAGTCCC 59.031 50.000 0.00 0.00 0.00 4.46
4423 8989 2.971330 CTCTTCATGCATCCTAGTCCCT 59.029 50.000 0.00 0.00 0.00 4.20
4424 8990 3.387962 TCTTCATGCATCCTAGTCCCTT 58.612 45.455 0.00 0.00 0.00 3.95
4425 8991 3.389329 TCTTCATGCATCCTAGTCCCTTC 59.611 47.826 0.00 0.00 0.00 3.46
4426 8992 1.688735 TCATGCATCCTAGTCCCTTCG 59.311 52.381 0.00 0.00 0.00 3.79
4427 8993 1.688735 CATGCATCCTAGTCCCTTCGA 59.311 52.381 0.00 0.00 0.00 3.71
4428 8994 1.403814 TGCATCCTAGTCCCTTCGAG 58.596 55.000 0.00 0.00 0.00 4.04
4429 8995 1.342076 TGCATCCTAGTCCCTTCGAGT 60.342 52.381 0.00 0.00 0.00 4.18
4430 8996 1.338655 GCATCCTAGTCCCTTCGAGTC 59.661 57.143 0.00 0.00 0.00 3.36
4431 8997 2.938838 CATCCTAGTCCCTTCGAGTCT 58.061 52.381 0.00 0.00 0.00 3.24
4432 8998 3.292460 CATCCTAGTCCCTTCGAGTCTT 58.708 50.000 0.00 0.00 0.00 3.01
4433 8999 2.724454 TCCTAGTCCCTTCGAGTCTTG 58.276 52.381 0.00 0.00 0.00 3.02
4434 9000 2.041350 TCCTAGTCCCTTCGAGTCTTGT 59.959 50.000 0.00 0.00 0.00 3.16
4435 9001 2.424246 CCTAGTCCCTTCGAGTCTTGTC 59.576 54.545 0.00 0.00 0.00 3.18
4436 9002 1.996798 AGTCCCTTCGAGTCTTGTCA 58.003 50.000 0.00 0.00 0.00 3.58
4437 9003 2.530701 AGTCCCTTCGAGTCTTGTCAT 58.469 47.619 0.00 0.00 0.00 3.06
4438 9004 2.494073 AGTCCCTTCGAGTCTTGTCATC 59.506 50.000 0.00 0.00 0.00 2.92
4439 9005 1.825474 TCCCTTCGAGTCTTGTCATCC 59.175 52.381 0.00 0.00 0.00 3.51
4440 9006 1.469940 CCCTTCGAGTCTTGTCATCCG 60.470 57.143 0.00 0.00 0.00 4.18
4441 9007 1.469940 CCTTCGAGTCTTGTCATCCGG 60.470 57.143 0.00 0.00 0.00 5.14
4442 9008 0.108804 TTCGAGTCTTGTCATCCGGC 60.109 55.000 0.00 0.00 0.00 6.13
4443 9009 1.519455 CGAGTCTTGTCATCCGGCC 60.519 63.158 0.00 0.00 0.00 6.13
4444 9010 1.901085 GAGTCTTGTCATCCGGCCT 59.099 57.895 0.00 0.00 0.00 5.19
4445 9011 0.179097 GAGTCTTGTCATCCGGCCTC 60.179 60.000 0.00 0.00 0.00 4.70
4446 9012 0.616111 AGTCTTGTCATCCGGCCTCT 60.616 55.000 0.00 0.00 0.00 3.69
4447 9013 0.179097 GTCTTGTCATCCGGCCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
4448 9014 0.324738 TCTTGTCATCCGGCCTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
4449 9015 0.103937 CTTGTCATCCGGCCTCTCTC 59.896 60.000 0.00 0.00 0.00 3.20
4450 9016 1.330655 TTGTCATCCGGCCTCTCTCC 61.331 60.000 0.00 0.00 0.00 3.71
4451 9017 1.758514 GTCATCCGGCCTCTCTCCA 60.759 63.158 0.00 0.00 0.00 3.86
4452 9018 1.456518 TCATCCGGCCTCTCTCCAG 60.457 63.158 0.00 0.00 0.00 3.86
4453 9019 2.841988 ATCCGGCCTCTCTCCAGC 60.842 66.667 0.00 0.00 0.00 4.85
4457 9023 2.686835 GGCCTCTCTCCAGCCAGT 60.687 66.667 0.00 0.00 46.34 4.00
4458 9024 1.381872 GGCCTCTCTCCAGCCAGTA 60.382 63.158 0.00 0.00 46.34 2.74
4459 9025 0.762461 GGCCTCTCTCCAGCCAGTAT 60.762 60.000 0.00 0.00 46.34 2.12
4460 9026 1.127343 GCCTCTCTCCAGCCAGTATT 58.873 55.000 0.00 0.00 0.00 1.89
4461 9027 1.488393 GCCTCTCTCCAGCCAGTATTT 59.512 52.381 0.00 0.00 0.00 1.40
4462 9028 2.700897 GCCTCTCTCCAGCCAGTATTTA 59.299 50.000 0.00 0.00 0.00 1.40
4463 9029 3.493524 GCCTCTCTCCAGCCAGTATTTAC 60.494 52.174 0.00 0.00 0.00 2.01
4464 9030 3.070302 CCTCTCTCCAGCCAGTATTTACC 59.930 52.174 0.00 0.00 0.00 2.85
4465 9031 3.039011 TCTCTCCAGCCAGTATTTACCC 58.961 50.000 0.00 0.00 0.00 3.69
4466 9032 2.104963 CTCTCCAGCCAGTATTTACCCC 59.895 54.545 0.00 0.00 0.00 4.95
4467 9033 2.127708 CTCCAGCCAGTATTTACCCCT 58.872 52.381 0.00 0.00 0.00 4.79
4468 9034 3.051650 TCTCCAGCCAGTATTTACCCCTA 60.052 47.826 0.00 0.00 0.00 3.53
4469 9035 3.910627 CTCCAGCCAGTATTTACCCCTAT 59.089 47.826 0.00 0.00 0.00 2.57
4470 9036 3.650942 TCCAGCCAGTATTTACCCCTATG 59.349 47.826 0.00 0.00 0.00 2.23
4471 9037 3.650942 CCAGCCAGTATTTACCCCTATGA 59.349 47.826 0.00 0.00 0.00 2.15
4472 9038 4.104102 CCAGCCAGTATTTACCCCTATGAA 59.896 45.833 0.00 0.00 0.00 2.57
4473 9039 5.063880 CAGCCAGTATTTACCCCTATGAAC 58.936 45.833 0.00 0.00 0.00 3.18
4474 9040 4.975794 AGCCAGTATTTACCCCTATGAACT 59.024 41.667 0.00 0.00 0.00 3.01
4475 9041 5.432060 AGCCAGTATTTACCCCTATGAACTT 59.568 40.000 0.00 0.00 0.00 2.66
4476 9042 6.069029 AGCCAGTATTTACCCCTATGAACTTT 60.069 38.462 0.00 0.00 0.00 2.66
4477 9043 7.128263 AGCCAGTATTTACCCCTATGAACTTTA 59.872 37.037 0.00 0.00 0.00 1.85
4478 9044 7.444487 GCCAGTATTTACCCCTATGAACTTTAG 59.556 40.741 0.00 0.00 0.00 1.85
4479 9045 7.444487 CCAGTATTTACCCCTATGAACTTTAGC 59.556 40.741 0.00 0.00 0.00 3.09
4480 9046 8.211629 CAGTATTTACCCCTATGAACTTTAGCT 58.788 37.037 0.00 0.00 0.00 3.32
4481 9047 8.430431 AGTATTTACCCCTATGAACTTTAGCTC 58.570 37.037 0.00 0.00 0.00 4.09
4482 9048 3.821421 ACCCCTATGAACTTTAGCTCG 57.179 47.619 0.00 0.00 0.00 5.03
4483 9049 3.105283 ACCCCTATGAACTTTAGCTCGT 58.895 45.455 0.00 0.00 0.00 4.18
4484 9050 4.284178 ACCCCTATGAACTTTAGCTCGTA 58.716 43.478 0.00 0.00 0.00 3.43
4485 9051 4.713321 ACCCCTATGAACTTTAGCTCGTAA 59.287 41.667 0.00 0.00 0.00 3.18
4486 9052 5.048507 CCCCTATGAACTTTAGCTCGTAAC 58.951 45.833 0.00 0.00 0.00 2.50
4487 9053 5.394883 CCCCTATGAACTTTAGCTCGTAACA 60.395 44.000 0.00 0.00 0.00 2.41
4488 9054 6.103997 CCCTATGAACTTTAGCTCGTAACAA 58.896 40.000 0.00 0.00 0.00 2.83
4489 9055 6.761714 CCCTATGAACTTTAGCTCGTAACAAT 59.238 38.462 0.00 0.00 0.00 2.71
4490 9056 7.254455 CCCTATGAACTTTAGCTCGTAACAATG 60.254 40.741 0.00 0.00 0.00 2.82
4491 9057 7.277981 CCTATGAACTTTAGCTCGTAACAATGT 59.722 37.037 0.00 0.00 0.00 2.71
4492 9058 6.223138 TGAACTTTAGCTCGTAACAATGTG 57.777 37.500 0.00 0.00 0.00 3.21
4493 9059 5.986741 TGAACTTTAGCTCGTAACAATGTGA 59.013 36.000 0.00 0.00 0.00 3.58
4494 9060 6.145534 TGAACTTTAGCTCGTAACAATGTGAG 59.854 38.462 0.00 0.00 0.00 3.51
4502 9068 6.739900 CTCGTAACAATGTGAGCTACTATG 57.260 41.667 0.00 0.00 0.00 2.23
4503 9069 6.445357 TCGTAACAATGTGAGCTACTATGA 57.555 37.500 0.00 0.00 0.00 2.15
4504 9070 7.039313 TCGTAACAATGTGAGCTACTATGAT 57.961 36.000 0.00 0.00 0.00 2.45
4505 9071 7.139392 TCGTAACAATGTGAGCTACTATGATC 58.861 38.462 0.00 0.00 0.00 2.92
4506 9072 6.918022 CGTAACAATGTGAGCTACTATGATCA 59.082 38.462 0.00 0.00 0.00 2.92
4507 9073 7.114106 CGTAACAATGTGAGCTACTATGATCAG 59.886 40.741 0.09 0.00 32.75 2.90
4508 9074 6.477053 ACAATGTGAGCTACTATGATCAGT 57.523 37.500 0.09 0.00 32.75 3.41
4509 9075 6.279123 ACAATGTGAGCTACTATGATCAGTG 58.721 40.000 0.09 0.00 32.75 3.66
4510 9076 6.097412 ACAATGTGAGCTACTATGATCAGTGA 59.903 38.462 0.09 0.00 32.75 3.41
4511 9077 5.764487 TGTGAGCTACTATGATCAGTGAG 57.236 43.478 0.09 0.96 32.75 3.51
4512 9078 5.440610 TGTGAGCTACTATGATCAGTGAGA 58.559 41.667 0.09 0.00 32.75 3.27
4513 9079 5.530543 TGTGAGCTACTATGATCAGTGAGAG 59.469 44.000 0.09 0.00 32.75 3.20
4514 9080 5.530915 GTGAGCTACTATGATCAGTGAGAGT 59.469 44.000 0.09 2.30 32.75 3.24
4515 9081 5.762711 TGAGCTACTATGATCAGTGAGAGTC 59.237 44.000 0.09 0.00 0.00 3.36
4516 9082 5.070001 AGCTACTATGATCAGTGAGAGTCC 58.930 45.833 0.09 0.00 0.00 3.85
4517 9083 4.824537 GCTACTATGATCAGTGAGAGTCCA 59.175 45.833 0.09 0.00 0.00 4.02
4518 9084 5.048782 GCTACTATGATCAGTGAGAGTCCAG 60.049 48.000 0.09 0.00 0.00 3.86
4519 9085 3.636300 ACTATGATCAGTGAGAGTCCAGC 59.364 47.826 0.09 0.00 0.00 4.85
4520 9086 0.813821 TGATCAGTGAGAGTCCAGCG 59.186 55.000 0.00 0.00 0.00 5.18
4521 9087 0.527385 GATCAGTGAGAGTCCAGCGC 60.527 60.000 0.00 0.00 0.00 5.92
4522 9088 1.253593 ATCAGTGAGAGTCCAGCGCA 61.254 55.000 11.47 0.00 0.00 6.09
4523 9089 1.445754 CAGTGAGAGTCCAGCGCAG 60.446 63.158 11.47 0.00 0.00 5.18
4524 9090 2.125753 GTGAGAGTCCAGCGCAGG 60.126 66.667 13.53 13.53 0.00 4.85
4525 9091 2.283173 TGAGAGTCCAGCGCAGGA 60.283 61.111 18.72 18.72 34.64 3.86
4526 9092 2.346541 TGAGAGTCCAGCGCAGGAG 61.347 63.158 23.25 1.60 38.64 3.69
4527 9093 3.073735 AGAGTCCAGCGCAGGAGG 61.074 66.667 23.25 11.81 38.64 4.30
4528 9094 3.386237 GAGTCCAGCGCAGGAGGT 61.386 66.667 23.25 12.69 38.64 3.85
4529 9095 2.037367 AGTCCAGCGCAGGAGGTA 59.963 61.111 23.25 0.00 38.64 3.08
4530 9096 1.381872 AGTCCAGCGCAGGAGGTAT 60.382 57.895 23.25 5.88 38.64 2.73
4531 9097 0.106167 AGTCCAGCGCAGGAGGTATA 60.106 55.000 23.25 0.00 38.64 1.47
4532 9098 0.032267 GTCCAGCGCAGGAGGTATAC 59.968 60.000 23.25 6.03 38.64 1.47
4533 9099 0.106167 TCCAGCGCAGGAGGTATACT 60.106 55.000 18.72 0.00 32.77 2.12
4534 9100 1.144298 TCCAGCGCAGGAGGTATACTA 59.856 52.381 18.72 0.00 32.77 1.82
4535 9101 1.961394 CCAGCGCAGGAGGTATACTAA 59.039 52.381 14.67 0.00 0.00 2.24
4536 9102 2.563179 CCAGCGCAGGAGGTATACTAAT 59.437 50.000 14.67 0.00 0.00 1.73
4537 9103 3.367498 CCAGCGCAGGAGGTATACTAATC 60.367 52.174 14.67 0.00 0.00 1.75
4538 9104 3.255888 CAGCGCAGGAGGTATACTAATCA 59.744 47.826 11.47 0.00 0.00 2.57
4539 9105 4.081972 CAGCGCAGGAGGTATACTAATCAT 60.082 45.833 11.47 0.00 0.00 2.45
4540 9106 4.158764 AGCGCAGGAGGTATACTAATCATC 59.841 45.833 11.47 0.00 0.00 2.92
4541 9107 4.082190 GCGCAGGAGGTATACTAATCATCA 60.082 45.833 0.30 0.00 0.00 3.07
4542 9108 5.566826 GCGCAGGAGGTATACTAATCATCAA 60.567 44.000 0.30 0.00 0.00 2.57
4543 9109 6.634805 CGCAGGAGGTATACTAATCATCAAT 58.365 40.000 2.25 0.00 0.00 2.57
4544 9110 6.533012 CGCAGGAGGTATACTAATCATCAATG 59.467 42.308 2.25 0.00 0.00 2.82
4545 9111 6.820656 GCAGGAGGTATACTAATCATCAATGG 59.179 42.308 2.25 0.00 0.00 3.16
4546 9112 7.527868 GCAGGAGGTATACTAATCATCAATGGT 60.528 40.741 2.25 0.00 0.00 3.55
4547 9113 9.035890 CAGGAGGTATACTAATCATCAATGGTA 57.964 37.037 2.25 0.00 0.00 3.25
4548 9114 9.615660 AGGAGGTATACTAATCATCAATGGTAA 57.384 33.333 2.25 0.00 0.00 2.85
4554 9120 8.978874 ATACTAATCATCAATGGTAAAGTGCA 57.021 30.769 0.00 0.00 0.00 4.57
4555 9121 7.701539 ACTAATCATCAATGGTAAAGTGCAA 57.298 32.000 0.00 0.00 0.00 4.08
4556 9122 7.538575 ACTAATCATCAATGGTAAAGTGCAAC 58.461 34.615 0.00 0.00 0.00 4.17
4557 9123 4.782019 TCATCAATGGTAAAGTGCAACC 57.218 40.909 0.00 0.00 37.80 3.77
4565 9131 4.528920 TGGTAAAGTGCAACCAAAGTAGT 58.471 39.130 5.49 0.00 42.74 2.73
4566 9132 4.577283 TGGTAAAGTGCAACCAAAGTAGTC 59.423 41.667 5.49 0.00 42.74 2.59
4567 9133 4.023450 GGTAAAGTGCAACCAAAGTAGTCC 60.023 45.833 0.21 0.00 37.80 3.85
4568 9134 3.290948 AAGTGCAACCAAAGTAGTCCA 57.709 42.857 0.00 0.00 37.80 4.02
4569 9135 2.851195 AGTGCAACCAAAGTAGTCCAG 58.149 47.619 0.00 0.00 37.80 3.86
4570 9136 2.438021 AGTGCAACCAAAGTAGTCCAGA 59.562 45.455 0.00 0.00 37.80 3.86
4571 9137 3.118038 AGTGCAACCAAAGTAGTCCAGAA 60.118 43.478 0.00 0.00 37.80 3.02
4572 9138 3.251004 GTGCAACCAAAGTAGTCCAGAAG 59.749 47.826 0.00 0.00 0.00 2.85
4573 9139 3.135712 TGCAACCAAAGTAGTCCAGAAGA 59.864 43.478 0.00 0.00 0.00 2.87
4574 9140 3.498777 GCAACCAAAGTAGTCCAGAAGAC 59.501 47.826 0.00 0.00 46.71 3.01
4586 9152 5.476752 GTCCAGAAGACAATATGACAAGC 57.523 43.478 0.00 0.00 45.55 4.01
4587 9153 4.333926 GTCCAGAAGACAATATGACAAGCC 59.666 45.833 0.00 0.00 45.55 4.35
4588 9154 3.310774 CCAGAAGACAATATGACAAGCCG 59.689 47.826 0.00 0.00 0.00 5.52
4589 9155 3.310774 CAGAAGACAATATGACAAGCCGG 59.689 47.826 0.00 0.00 0.00 6.13
4590 9156 1.668419 AGACAATATGACAAGCCGGC 58.332 50.000 21.89 21.89 0.00 6.13
4591 9157 0.304705 GACAATATGACAAGCCGGCG 59.695 55.000 23.20 10.77 0.00 6.46
4592 9158 0.107897 ACAATATGACAAGCCGGCGA 60.108 50.000 23.20 4.01 0.00 5.54
4593 9159 1.013596 CAATATGACAAGCCGGCGAA 58.986 50.000 23.20 6.40 0.00 4.70
4594 9160 1.603802 CAATATGACAAGCCGGCGAAT 59.396 47.619 23.20 10.34 0.00 3.34
4595 9161 2.805671 CAATATGACAAGCCGGCGAATA 59.194 45.455 23.20 15.35 0.00 1.75
4596 9162 2.605837 TATGACAAGCCGGCGAATAA 57.394 45.000 23.20 8.87 0.00 1.40
4597 9163 1.745232 ATGACAAGCCGGCGAATAAA 58.255 45.000 23.20 7.03 0.00 1.40
4598 9164 1.083489 TGACAAGCCGGCGAATAAAG 58.917 50.000 23.20 9.39 0.00 1.85
4599 9165 0.377203 GACAAGCCGGCGAATAAAGG 59.623 55.000 23.20 7.92 0.00 3.11
4600 9166 0.322187 ACAAGCCGGCGAATAAAGGT 60.322 50.000 23.20 8.58 0.00 3.50
4601 9167 0.098728 CAAGCCGGCGAATAAAGGTG 59.901 55.000 23.20 5.33 0.00 4.00
4602 9168 0.035820 AAGCCGGCGAATAAAGGTGA 60.036 50.000 23.20 0.00 0.00 4.02
4603 9169 0.035820 AGCCGGCGAATAAAGGTGAA 60.036 50.000 23.20 0.00 0.00 3.18
4604 9170 0.806241 GCCGGCGAATAAAGGTGAAA 59.194 50.000 12.58 0.00 0.00 2.69
4605 9171 1.202143 GCCGGCGAATAAAGGTGAAAG 60.202 52.381 12.58 0.00 0.00 2.62
4606 9172 1.202143 CCGGCGAATAAAGGTGAAAGC 60.202 52.381 9.30 0.00 0.00 3.51
4607 9173 1.466950 CGGCGAATAAAGGTGAAAGCA 59.533 47.619 0.00 0.00 36.26 3.91
4608 9174 2.095466 CGGCGAATAAAGGTGAAAGCAA 60.095 45.455 0.00 0.00 36.26 3.91
4609 9175 3.610585 CGGCGAATAAAGGTGAAAGCAAA 60.611 43.478 0.00 0.00 36.26 3.68
4610 9176 3.920412 GGCGAATAAAGGTGAAAGCAAAG 59.080 43.478 0.00 0.00 36.26 2.77
4611 9177 3.920412 GCGAATAAAGGTGAAAGCAAAGG 59.080 43.478 0.00 0.00 36.26 3.11
4612 9178 4.558697 GCGAATAAAGGTGAAAGCAAAGGT 60.559 41.667 0.00 0.00 36.26 3.50
4613 9179 5.528870 CGAATAAAGGTGAAAGCAAAGGTT 58.471 37.500 0.00 0.00 36.26 3.50
4614 9180 5.629435 CGAATAAAGGTGAAAGCAAAGGTTC 59.371 40.000 0.00 0.00 36.26 3.62
4615 9181 6.515035 CGAATAAAGGTGAAAGCAAAGGTTCT 60.515 38.462 0.00 0.00 36.26 3.01
4616 9182 6.731292 ATAAAGGTGAAAGCAAAGGTTCTT 57.269 33.333 0.00 0.00 36.26 2.52
4617 9183 7.833285 ATAAAGGTGAAAGCAAAGGTTCTTA 57.167 32.000 0.00 0.00 36.26 2.10
4618 9184 6.731292 AAAGGTGAAAGCAAAGGTTCTTAT 57.269 33.333 0.00 0.00 36.26 1.73
4619 9185 5.966742 AGGTGAAAGCAAAGGTTCTTATC 57.033 39.130 0.00 0.00 36.26 1.75
4620 9186 5.385198 AGGTGAAAGCAAAGGTTCTTATCA 58.615 37.500 0.00 0.00 36.26 2.15
4621 9187 5.833131 AGGTGAAAGCAAAGGTTCTTATCAA 59.167 36.000 0.00 0.00 36.26 2.57
4622 9188 6.015940 AGGTGAAAGCAAAGGTTCTTATCAAG 60.016 38.462 0.00 0.00 36.26 3.02
4623 9189 5.631096 GTGAAAGCAAAGGTTCTTATCAAGC 59.369 40.000 0.00 0.00 0.00 4.01
4624 9190 5.301551 TGAAAGCAAAGGTTCTTATCAAGCA 59.698 36.000 0.00 0.00 0.00 3.91
4625 9191 5.789643 AAGCAAAGGTTCTTATCAAGCAA 57.210 34.783 0.00 0.00 0.00 3.91
4626 9192 5.126396 AGCAAAGGTTCTTATCAAGCAAC 57.874 39.130 0.00 0.00 0.00 4.17
4627 9193 4.584325 AGCAAAGGTTCTTATCAAGCAACA 59.416 37.500 0.00 0.00 0.00 3.33
4628 9194 5.068987 AGCAAAGGTTCTTATCAAGCAACAA 59.931 36.000 0.00 0.00 0.00 2.83
4629 9195 5.175673 GCAAAGGTTCTTATCAAGCAACAAC 59.824 40.000 0.00 0.00 0.00 3.32
4630 9196 6.507023 CAAAGGTTCTTATCAAGCAACAACT 58.493 36.000 0.00 0.00 0.00 3.16
4631 9197 5.695851 AGGTTCTTATCAAGCAACAACTG 57.304 39.130 0.00 0.00 0.00 3.16
4632 9198 5.376625 AGGTTCTTATCAAGCAACAACTGA 58.623 37.500 0.00 0.00 0.00 3.41
4633 9199 5.827797 AGGTTCTTATCAAGCAACAACTGAA 59.172 36.000 0.00 0.00 0.00 3.02
4634 9200 5.915196 GGTTCTTATCAAGCAACAACTGAAC 59.085 40.000 0.00 0.00 0.00 3.18
4635 9201 6.459573 GGTTCTTATCAAGCAACAACTGAACA 60.460 38.462 0.00 0.00 33.85 3.18
4636 9202 6.691754 TCTTATCAAGCAACAACTGAACAA 57.308 33.333 0.00 0.00 0.00 2.83
4637 9203 6.728200 TCTTATCAAGCAACAACTGAACAAG 58.272 36.000 0.00 0.00 0.00 3.16
4638 9204 6.542005 TCTTATCAAGCAACAACTGAACAAGA 59.458 34.615 0.00 0.00 0.00 3.02
4639 9205 5.779529 ATCAAGCAACAACTGAACAAGAT 57.220 34.783 0.00 0.00 0.00 2.40
4640 9206 4.923893 TCAAGCAACAACTGAACAAGATG 58.076 39.130 0.00 0.00 34.91 2.90
4641 9207 4.398988 TCAAGCAACAACTGAACAAGATGT 59.601 37.500 0.00 0.00 43.26 3.06
4655 9221 5.153950 ACAAGATGTTCAGAACTACTCCC 57.846 43.478 14.51 0.00 0.00 4.30
4656 9222 4.841246 ACAAGATGTTCAGAACTACTCCCT 59.159 41.667 14.51 0.55 0.00 4.20
4657 9223 5.046950 ACAAGATGTTCAGAACTACTCCCTC 60.047 44.000 14.51 1.12 0.00 4.30
4658 9224 4.027437 AGATGTTCAGAACTACTCCCTCC 58.973 47.826 14.51 0.00 0.00 4.30
4659 9225 2.168496 TGTTCAGAACTACTCCCTCCG 58.832 52.381 14.51 0.00 0.00 4.63
4660 9226 2.169330 GTTCAGAACTACTCCCTCCGT 58.831 52.381 6.00 0.00 0.00 4.69
4661 9227 2.561858 GTTCAGAACTACTCCCTCCGTT 59.438 50.000 6.00 0.00 0.00 4.44
4662 9228 2.444421 TCAGAACTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 36.81 3.95
4663 9229 1.477295 CAGAACTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 37.15 3.62
4664 9230 1.076677 AGAACTACTCCCTCCGTTCCA 59.923 52.381 0.00 0.00 37.15 3.53
4665 9231 1.897802 GAACTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 31.89 3.53
4666 9232 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
4667 9233 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
4668 9234 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
4669 9235 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
4670 9236 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4671 9237 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4672 9238 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4673 9239 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4674 9240 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4675 9241 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4676 9242 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
4677 9243 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
4678 9244 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
4679 9245 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
4680 9246 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
4681 9247 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
4682 9248 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
4683 9249 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
4684 9250 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
4685 9251 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
4686 9252 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
4687 9253 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
4688 9254 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
4695 9261 9.915629 AGATGACTCAACTTTGTACTAACTTAG 57.084 33.333 0.00 0.00 0.00 2.18
4696 9262 9.694137 GATGACTCAACTTTGTACTAACTTAGT 57.306 33.333 6.68 6.68 42.68 2.24
4711 9277 7.432059 ACTAACTTAGTACAAGTTGAGTCACC 58.568 38.462 22.72 0.00 40.38 4.02
4712 9278 6.481434 AACTTAGTACAAGTTGAGTCACCT 57.519 37.500 10.54 0.00 38.88 4.00
4713 9279 7.592885 AACTTAGTACAAGTTGAGTCACCTA 57.407 36.000 10.54 0.00 38.88 3.08
4714 9280 7.778185 ACTTAGTACAAGTTGAGTCACCTAT 57.222 36.000 10.54 0.00 0.00 2.57
4715 9281 8.191534 ACTTAGTACAAGTTGAGTCACCTATT 57.808 34.615 10.54 0.00 0.00 1.73
4716 9282 8.648693 ACTTAGTACAAGTTGAGTCACCTATTT 58.351 33.333 10.54 0.00 0.00 1.40
4717 9283 9.490379 CTTAGTACAAGTTGAGTCACCTATTTT 57.510 33.333 10.54 0.00 0.00 1.82
4718 9284 7.730364 AGTACAAGTTGAGTCACCTATTTTG 57.270 36.000 10.54 0.00 0.00 2.44
4719 9285 6.710744 AGTACAAGTTGAGTCACCTATTTTGG 59.289 38.462 10.54 0.00 0.00 3.28
4720 9286 5.690865 ACAAGTTGAGTCACCTATTTTGGA 58.309 37.500 10.54 0.00 0.00 3.53
4721 9287 6.126409 ACAAGTTGAGTCACCTATTTTGGAA 58.874 36.000 10.54 0.00 0.00 3.53
4722 9288 6.039382 ACAAGTTGAGTCACCTATTTTGGAAC 59.961 38.462 10.54 0.00 0.00 3.62
4723 9289 4.755123 AGTTGAGTCACCTATTTTGGAACG 59.245 41.667 0.00 0.00 0.00 3.95
4724 9290 3.670625 TGAGTCACCTATTTTGGAACGG 58.329 45.455 0.00 0.00 0.00 4.44
4725 9291 3.325425 TGAGTCACCTATTTTGGAACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4726 9292 3.933332 GAGTCACCTATTTTGGAACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4727 9293 3.007635 GTCACCTATTTTGGAACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4728 9294 2.026636 TCACCTATTTTGGAACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4729 9295 2.026636 CACCTATTTTGGAACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4730 9296 2.238898 ACCTATTTTGGAACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4731 9297 2.238898 CCTATTTTGGAACGGAGGGAGT 59.761 50.000 0.00 0.00 0.00 3.85
4732 9298 3.453353 CCTATTTTGGAACGGAGGGAGTA 59.547 47.826 0.00 0.00 0.00 2.59
4733 9299 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
4734 9300 2.314071 TTTGGAACGGAGGGAGTAGA 57.686 50.000 0.00 0.00 0.00 2.59
4735 9301 1.553706 TTGGAACGGAGGGAGTAGAC 58.446 55.000 0.00 0.00 0.00 2.59
4736 9302 0.679002 TGGAACGGAGGGAGTAGACG 60.679 60.000 0.00 0.00 0.00 4.18
4737 9303 0.679321 GGAACGGAGGGAGTAGACGT 60.679 60.000 0.00 0.00 39.74 4.34
4738 9304 3.353342 AACGGAGGGAGTAGACGTT 57.647 52.632 0.00 0.00 42.17 3.99
4739 9305 2.359900 GAACGGAGGGAGTAGACGTTA 58.640 52.381 0.00 0.00 46.22 3.18
4740 9306 2.035530 ACGGAGGGAGTAGACGTTAG 57.964 55.000 0.00 0.00 33.54 2.34
4741 9307 1.556911 ACGGAGGGAGTAGACGTTAGA 59.443 52.381 0.00 0.00 33.54 2.10
4742 9308 1.939255 CGGAGGGAGTAGACGTTAGAC 59.061 57.143 0.00 0.00 0.00 2.59
4744 9310 2.419297 GGAGGGAGTAGACGTTAGACGA 60.419 54.545 7.54 0.00 46.05 4.20
4745 9311 2.865551 GAGGGAGTAGACGTTAGACGAG 59.134 54.545 7.54 0.00 46.05 4.18
4746 9312 2.499289 AGGGAGTAGACGTTAGACGAGA 59.501 50.000 7.54 0.00 46.05 4.04
4747 9313 3.055530 AGGGAGTAGACGTTAGACGAGAA 60.056 47.826 7.54 0.00 46.05 2.87
4748 9314 3.063316 GGGAGTAGACGTTAGACGAGAAC 59.937 52.174 7.54 2.33 46.05 3.01
4749 9315 3.681897 GGAGTAGACGTTAGACGAGAACA 59.318 47.826 7.54 0.00 46.05 3.18
4750 9316 4.435386 GGAGTAGACGTTAGACGAGAACAC 60.435 50.000 7.54 1.34 46.05 3.32
4751 9317 4.314121 AGTAGACGTTAGACGAGAACACT 58.686 43.478 7.54 0.95 46.05 3.55
4752 9318 5.473931 AGTAGACGTTAGACGAGAACACTA 58.526 41.667 7.54 0.00 46.05 2.74
4753 9319 4.925061 AGACGTTAGACGAGAACACTAG 57.075 45.455 7.54 0.00 46.05 2.57
4754 9320 3.683822 AGACGTTAGACGAGAACACTAGG 59.316 47.826 7.54 0.00 46.05 3.02
4755 9321 3.668447 ACGTTAGACGAGAACACTAGGA 58.332 45.455 7.54 0.00 46.05 2.94
4756 9322 3.434984 ACGTTAGACGAGAACACTAGGAC 59.565 47.826 7.54 0.00 46.05 3.85
4757 9323 3.683822 CGTTAGACGAGAACACTAGGACT 59.316 47.826 0.00 0.00 46.05 3.85
4758 9324 4.867047 CGTTAGACGAGAACACTAGGACTA 59.133 45.833 0.00 0.00 46.05 2.59
4759 9325 5.349817 CGTTAGACGAGAACACTAGGACTAA 59.650 44.000 0.00 0.00 46.05 2.24
4760 9326 6.128445 CGTTAGACGAGAACACTAGGACTAAA 60.128 42.308 0.00 0.00 46.05 1.85
4761 9327 7.571983 CGTTAGACGAGAACACTAGGACTAAAA 60.572 40.741 0.00 0.00 46.05 1.52
4762 9328 6.645790 AGACGAGAACACTAGGACTAAAAA 57.354 37.500 0.00 0.00 0.00 1.94
4763 9329 6.679843 AGACGAGAACACTAGGACTAAAAAG 58.320 40.000 0.00 0.00 0.00 2.27
4764 9330 5.228665 ACGAGAACACTAGGACTAAAAAGC 58.771 41.667 0.00 0.00 0.00 3.51
4765 9331 5.010820 ACGAGAACACTAGGACTAAAAAGCT 59.989 40.000 0.00 0.00 0.00 3.74
4766 9332 5.927115 CGAGAACACTAGGACTAAAAAGCTT 59.073 40.000 0.00 0.00 0.00 3.74
4767 9333 6.424207 CGAGAACACTAGGACTAAAAAGCTTT 59.576 38.462 5.69 5.69 0.00 3.51
4768 9334 7.597743 CGAGAACACTAGGACTAAAAAGCTTTA 59.402 37.037 13.10 0.00 0.00 1.85
4769 9335 8.834749 AGAACACTAGGACTAAAAAGCTTTAG 57.165 34.615 13.10 9.78 46.48 1.85
4770 9336 8.648693 AGAACACTAGGACTAAAAAGCTTTAGA 58.351 33.333 13.10 2.35 44.70 2.10
4771 9337 9.269453 GAACACTAGGACTAAAAAGCTTTAGAA 57.731 33.333 13.10 0.00 44.70 2.10
4772 9338 9.794719 AACACTAGGACTAAAAAGCTTTAGAAT 57.205 29.630 13.10 2.20 44.70 2.40
4773 9339 9.220767 ACACTAGGACTAAAAAGCTTTAGAATG 57.779 33.333 13.10 4.32 44.70 2.67
4774 9340 9.436957 CACTAGGACTAAAAAGCTTTAGAATGA 57.563 33.333 13.10 0.00 44.70 2.57
4775 9341 9.438228 ACTAGGACTAAAAAGCTTTAGAATGAC 57.562 33.333 13.10 1.08 44.70 3.06
4776 9342 9.436957 CTAGGACTAAAAAGCTTTAGAATGACA 57.563 33.333 13.10 0.00 44.70 3.58
4777 9343 8.691661 AGGACTAAAAAGCTTTAGAATGACAA 57.308 30.769 13.10 0.00 44.70 3.18
4778 9344 8.787852 AGGACTAAAAAGCTTTAGAATGACAAG 58.212 33.333 13.10 2.75 44.70 3.16
4779 9345 7.539022 GGACTAAAAAGCTTTAGAATGACAAGC 59.461 37.037 13.10 0.00 44.70 4.01
4780 9346 7.940850 ACTAAAAAGCTTTAGAATGACAAGCA 58.059 30.769 13.10 0.00 44.70 3.91
4781 9347 8.078596 ACTAAAAAGCTTTAGAATGACAAGCAG 58.921 33.333 13.10 0.00 44.70 4.24
4782 9348 4.431661 AAGCTTTAGAATGACAAGCAGC 57.568 40.909 0.00 0.00 44.57 5.25
4783 9349 3.683802 AGCTTTAGAATGACAAGCAGCT 58.316 40.909 5.95 0.00 44.57 4.24
4784 9350 4.836825 AGCTTTAGAATGACAAGCAGCTA 58.163 39.130 0.00 0.00 44.57 3.32
4785 9351 5.248640 AGCTTTAGAATGACAAGCAGCTAA 58.751 37.500 0.00 0.00 44.57 3.09
4786 9352 5.707298 AGCTTTAGAATGACAAGCAGCTAAA 59.293 36.000 0.00 0.00 44.57 1.85
4787 9353 5.797434 GCTTTAGAATGACAAGCAGCTAAAC 59.203 40.000 0.00 0.00 42.18 2.01
4788 9354 6.348868 GCTTTAGAATGACAAGCAGCTAAACT 60.349 38.462 0.00 0.00 42.18 2.66
4798 9364 2.100605 CAGCTAAACTGGTCCTGGAC 57.899 55.000 18.65 18.65 43.19 4.02
4799 9365 1.625818 CAGCTAAACTGGTCCTGGACT 59.374 52.381 25.01 8.66 43.19 3.85
4800 9366 2.039084 CAGCTAAACTGGTCCTGGACTT 59.961 50.000 25.01 14.33 43.19 3.01
4801 9367 2.303311 AGCTAAACTGGTCCTGGACTTC 59.697 50.000 25.01 11.08 32.47 3.01
4802 9368 2.303311 GCTAAACTGGTCCTGGACTTCT 59.697 50.000 25.01 9.19 32.47 2.85
4803 9369 2.938956 AAACTGGTCCTGGACTTCTG 57.061 50.000 25.01 15.49 32.47 3.02
4804 9370 1.059913 AACTGGTCCTGGACTTCTGG 58.940 55.000 25.01 13.20 35.98 3.86
4805 9371 0.104934 ACTGGTCCTGGACTTCTGGT 60.105 55.000 25.01 13.75 36.08 4.00
4806 9372 1.059913 CTGGTCCTGGACTTCTGGTT 58.940 55.000 25.01 0.00 36.08 3.67
4807 9373 2.257207 CTGGTCCTGGACTTCTGGTTA 58.743 52.381 25.01 2.96 36.08 2.85
4808 9374 2.637872 CTGGTCCTGGACTTCTGGTTAA 59.362 50.000 25.01 1.33 36.08 2.01
4809 9375 3.050089 TGGTCCTGGACTTCTGGTTAAA 58.950 45.455 25.01 0.00 36.08 1.52
4810 9376 3.181448 TGGTCCTGGACTTCTGGTTAAAC 60.181 47.826 25.01 5.68 36.08 2.01
4811 9377 3.064931 GTCCTGGACTTCTGGTTAAACG 58.935 50.000 19.53 0.00 36.08 3.60
4812 9378 1.804748 CCTGGACTTCTGGTTAAACGC 59.195 52.381 0.00 0.00 0.00 4.84
4813 9379 1.459592 CTGGACTTCTGGTTAAACGCG 59.540 52.381 3.53 3.53 0.00 6.01
4814 9380 1.068895 TGGACTTCTGGTTAAACGCGA 59.931 47.619 15.93 0.00 0.00 5.87
4815 9381 2.137523 GGACTTCTGGTTAAACGCGAA 58.862 47.619 15.93 0.00 0.00 4.70
4816 9382 2.545106 GGACTTCTGGTTAAACGCGAAA 59.455 45.455 15.93 0.26 0.00 3.46
4817 9383 3.538780 GACTTCTGGTTAAACGCGAAAC 58.461 45.455 15.93 13.92 0.00 2.78
4818 9384 2.937799 ACTTCTGGTTAAACGCGAAACA 59.062 40.909 15.93 4.53 0.00 2.83
4819 9385 3.562557 ACTTCTGGTTAAACGCGAAACAT 59.437 39.130 15.93 0.00 0.00 2.71
4820 9386 4.035909 ACTTCTGGTTAAACGCGAAACATT 59.964 37.500 15.93 1.96 0.00 2.71
4821 9387 5.236911 ACTTCTGGTTAAACGCGAAACATTA 59.763 36.000 15.93 0.91 0.00 1.90
4822 9388 5.866335 TCTGGTTAAACGCGAAACATTAT 57.134 34.783 15.93 0.00 0.00 1.28
4823 9389 6.964741 TCTGGTTAAACGCGAAACATTATA 57.035 33.333 15.93 0.00 0.00 0.98
4824 9390 7.542534 TCTGGTTAAACGCGAAACATTATAT 57.457 32.000 15.93 0.00 0.00 0.86
4825 9391 7.623770 TCTGGTTAAACGCGAAACATTATATC 58.376 34.615 15.93 0.62 0.00 1.63
4826 9392 7.493320 TCTGGTTAAACGCGAAACATTATATCT 59.507 33.333 15.93 0.00 0.00 1.98
4827 9393 7.976826 TGGTTAAACGCGAAACATTATATCTT 58.023 30.769 15.93 0.00 0.00 2.40
4828 9394 9.096160 TGGTTAAACGCGAAACATTATATCTTA 57.904 29.630 15.93 0.00 0.00 2.10
4833 9399 7.050281 ACGCGAAACATTATATCTTATCAGC 57.950 36.000 15.93 0.00 0.00 4.26
4834 9400 6.868864 ACGCGAAACATTATATCTTATCAGCT 59.131 34.615 15.93 0.00 0.00 4.24
4835 9401 7.062371 ACGCGAAACATTATATCTTATCAGCTC 59.938 37.037 15.93 0.00 0.00 4.09
4836 9402 7.062255 CGCGAAACATTATATCTTATCAGCTCA 59.938 37.037 0.00 0.00 0.00 4.26
4837 9403 8.165428 GCGAAACATTATATCTTATCAGCTCAC 58.835 37.037 0.00 0.00 0.00 3.51
4838 9404 9.196552 CGAAACATTATATCTTATCAGCTCACA 57.803 33.333 0.00 0.00 0.00 3.58
4840 9406 8.545229 AACATTATATCTTATCAGCTCACAGC 57.455 34.615 0.00 0.00 42.84 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 8.535335 CCAATTAGGCTCATAGCTCTATCTTTA 58.465 37.037 0.00 0.00 41.99 1.85
231 3068 0.916086 ATATCCTGTTGGGGCGAACA 59.084 50.000 0.00 1.37 34.64 3.18
247 3084 4.354662 GACGAAGGAGGATAAGGGGATAT 58.645 47.826 0.00 0.00 0.00 1.63
396 3807 3.997021 CACGAACTAACCTTGATTGCTCT 59.003 43.478 0.00 0.00 0.00 4.09
480 3988 0.611896 TGTGGCGTCAGATGAGAGGA 60.612 55.000 0.00 0.00 0.00 3.71
541 4049 4.187694 CAGATGCAAACTAAGAGAGACCC 58.812 47.826 0.00 0.00 0.00 4.46
665 4900 4.832590 AGCTTCAGATTTATGCAGATGC 57.167 40.909 0.00 0.00 42.50 3.91
815 5052 1.055040 ACTGCTCTGTCTTTCAGGCT 58.945 50.000 0.00 0.00 43.76 4.58
1103 5402 5.044558 CACGTTTAGCTCTATTCTTCCTCC 58.955 45.833 0.00 0.00 0.00 4.30
1139 5438 7.619698 TCCTCCAAATATCTCTCTTGACAAGTA 59.380 37.037 14.75 4.27 0.00 2.24
1374 5673 0.532573 TCTCCTCAGATCGCCACAAC 59.467 55.000 0.00 0.00 0.00 3.32
1416 5715 0.747852 TCACAAGTGCACGTAGGACA 59.252 50.000 12.01 0.00 41.69 4.02
1428 5727 1.414919 TCACGGGCTAACTTCACAAGT 59.585 47.619 0.00 0.00 45.46 3.16
2035 6342 0.608640 AGTGAGGAATGACGGTGGTC 59.391 55.000 0.00 0.00 43.71 4.02
2071 6379 4.220693 TCTTAATAGCTGCAAAGGCTCA 57.779 40.909 1.69 0.00 40.74 4.26
2261 6569 0.464735 ATCACTCTCTCGGTCGGAGG 60.465 60.000 7.50 0.00 43.34 4.30
2455 6763 9.483062 CGAAAAGAAAATTACAGAGCTAGATTG 57.517 33.333 0.00 0.00 0.00 2.67
2881 7194 1.341531 CGAAACCATATCCGCTCCTCT 59.658 52.381 0.00 0.00 0.00 3.69
3462 8023 3.261643 TCAGATTTGAGCTAGTGCCTTCA 59.738 43.478 0.00 0.00 40.80 3.02
3783 8344 2.095213 GTGCGCGAAATAATCAAGGACA 59.905 45.455 12.10 0.00 0.00 4.02
3891 8452 4.177026 AGTGCATGAAAAGCTACGTAGAG 58.823 43.478 26.53 3.52 0.00 2.43
4112 8676 5.676552 TCCAGTACATAATTTACACGCCAT 58.323 37.500 0.00 0.00 0.00 4.40
4353 8919 8.401955 AGGTTGAGTAGGGAATAAATAGGAAA 57.598 34.615 0.00 0.00 0.00 3.13
4355 8921 7.147373 CCAAGGTTGAGTAGGGAATAAATAGGA 60.147 40.741 0.00 0.00 0.00 2.94
4356 8922 6.998673 CCAAGGTTGAGTAGGGAATAAATAGG 59.001 42.308 0.00 0.00 0.00 2.57
4362 8928 5.343715 TGTACCAAGGTTGAGTAGGGAATA 58.656 41.667 0.00 0.00 0.00 1.75
4363 8929 4.172807 TGTACCAAGGTTGAGTAGGGAAT 58.827 43.478 0.00 0.00 0.00 3.01
4364 8930 3.589641 TGTACCAAGGTTGAGTAGGGAA 58.410 45.455 0.00 0.00 0.00 3.97
4365 8931 3.263369 TGTACCAAGGTTGAGTAGGGA 57.737 47.619 0.00 0.00 0.00 4.20
4366 8932 3.326880 ACTTGTACCAAGGTTGAGTAGGG 59.673 47.826 8.68 0.00 0.00 3.53
4367 8933 4.618920 ACTTGTACCAAGGTTGAGTAGG 57.381 45.455 8.68 0.00 0.00 3.18
4368 8934 5.011329 TGGTACTTGTACCAAGGTTGAGTAG 59.989 44.000 25.13 0.00 46.26 2.57
4369 8935 4.900652 TGGTACTTGTACCAAGGTTGAGTA 59.099 41.667 25.13 3.35 46.26 2.59
4370 8936 3.712733 TGGTACTTGTACCAAGGTTGAGT 59.287 43.478 25.13 2.44 46.26 3.41
4371 8937 4.345859 TGGTACTTGTACCAAGGTTGAG 57.654 45.455 25.13 0.00 46.26 3.02
4380 8946 8.336801 AGAGAAATTTCATTGGTACTTGTACC 57.663 34.615 19.99 19.83 40.48 3.34
4381 8947 9.827411 GAAGAGAAATTTCATTGGTACTTGTAC 57.173 33.333 19.99 2.55 0.00 2.90
4382 8948 9.567776 TGAAGAGAAATTTCATTGGTACTTGTA 57.432 29.630 19.99 3.74 30.03 2.41
4383 8949 8.463930 TGAAGAGAAATTTCATTGGTACTTGT 57.536 30.769 19.99 0.00 30.03 3.16
4384 8950 9.350357 CATGAAGAGAAATTTCATTGGTACTTG 57.650 33.333 19.99 8.73 41.91 3.16
4385 8951 8.031277 GCATGAAGAGAAATTTCATTGGTACTT 58.969 33.333 19.99 11.90 41.91 2.24
4386 8952 7.177216 TGCATGAAGAGAAATTTCATTGGTACT 59.823 33.333 19.99 5.07 41.91 2.73
4387 8953 7.315142 TGCATGAAGAGAAATTTCATTGGTAC 58.685 34.615 19.99 4.23 41.91 3.34
4388 8954 7.465353 TGCATGAAGAGAAATTTCATTGGTA 57.535 32.000 19.99 2.74 41.91 3.25
4389 8955 6.349243 TGCATGAAGAGAAATTTCATTGGT 57.651 33.333 19.99 0.00 41.91 3.67
4390 8956 6.479001 GGATGCATGAAGAGAAATTTCATTGG 59.521 38.462 19.99 7.51 41.91 3.16
4391 8957 7.265673 AGGATGCATGAAGAGAAATTTCATTG 58.734 34.615 19.99 8.73 41.91 2.82
4392 8958 7.419711 AGGATGCATGAAGAGAAATTTCATT 57.580 32.000 19.99 13.58 41.91 2.57
4393 8959 7.778853 ACTAGGATGCATGAAGAGAAATTTCAT 59.221 33.333 19.99 5.58 43.98 2.57
4394 8960 7.114754 ACTAGGATGCATGAAGAGAAATTTCA 58.885 34.615 19.99 0.00 38.76 2.69
4395 8961 7.255070 GGACTAGGATGCATGAAGAGAAATTTC 60.255 40.741 2.46 10.33 0.00 2.17
4396 8962 6.545298 GGACTAGGATGCATGAAGAGAAATTT 59.455 38.462 2.46 0.00 0.00 1.82
4397 8963 6.060788 GGACTAGGATGCATGAAGAGAAATT 58.939 40.000 2.46 0.00 0.00 1.82
4398 8964 5.455899 GGGACTAGGATGCATGAAGAGAAAT 60.456 44.000 2.46 0.00 0.00 2.17
4399 8965 4.141620 GGGACTAGGATGCATGAAGAGAAA 60.142 45.833 2.46 0.00 0.00 2.52
4400 8966 3.389329 GGGACTAGGATGCATGAAGAGAA 59.611 47.826 2.46 0.00 0.00 2.87
4401 8967 2.968574 GGGACTAGGATGCATGAAGAGA 59.031 50.000 2.46 0.00 0.00 3.10
4402 8968 2.971330 AGGGACTAGGATGCATGAAGAG 59.029 50.000 2.46 0.00 36.02 2.85
4403 8969 3.051940 AGGGACTAGGATGCATGAAGA 57.948 47.619 2.46 0.00 36.02 2.87
4404 8970 3.737850 GAAGGGACTAGGATGCATGAAG 58.262 50.000 2.46 0.44 38.49 3.02
4405 8971 2.103094 CGAAGGGACTAGGATGCATGAA 59.897 50.000 2.46 0.00 38.49 2.57
4406 8972 1.688735 CGAAGGGACTAGGATGCATGA 59.311 52.381 2.46 0.00 38.49 3.07
4407 8973 1.688735 TCGAAGGGACTAGGATGCATG 59.311 52.381 2.46 0.00 38.49 4.06
4408 8974 1.967066 CTCGAAGGGACTAGGATGCAT 59.033 52.381 0.00 0.00 38.49 3.96
4409 8975 1.342076 ACTCGAAGGGACTAGGATGCA 60.342 52.381 0.00 0.00 38.49 3.96
4410 8976 1.338655 GACTCGAAGGGACTAGGATGC 59.661 57.143 0.00 0.00 38.49 3.91
4411 8977 2.938838 AGACTCGAAGGGACTAGGATG 58.061 52.381 0.00 0.00 38.49 3.51
4412 8978 3.292460 CAAGACTCGAAGGGACTAGGAT 58.708 50.000 0.00 0.00 38.49 3.24
4413 8979 2.041350 ACAAGACTCGAAGGGACTAGGA 59.959 50.000 0.00 0.00 38.49 2.94
4414 8980 2.424246 GACAAGACTCGAAGGGACTAGG 59.576 54.545 0.00 0.00 38.49 3.02
4415 8981 3.082548 TGACAAGACTCGAAGGGACTAG 58.917 50.000 0.00 0.00 38.49 2.57
4416 8982 3.150458 TGACAAGACTCGAAGGGACTA 57.850 47.619 0.00 0.00 38.49 2.59
4418 8984 2.417515 GGATGACAAGACTCGAAGGGAC 60.418 54.545 0.00 0.00 0.00 4.46
4419 8985 1.825474 GGATGACAAGACTCGAAGGGA 59.175 52.381 0.00 0.00 0.00 4.20
4420 8986 1.469940 CGGATGACAAGACTCGAAGGG 60.470 57.143 0.00 0.00 0.00 3.95
4421 8987 1.469940 CCGGATGACAAGACTCGAAGG 60.470 57.143 0.00 0.00 0.00 3.46
4422 8988 1.914634 CCGGATGACAAGACTCGAAG 58.085 55.000 0.00 0.00 0.00 3.79
4423 8989 0.108804 GCCGGATGACAAGACTCGAA 60.109 55.000 5.05 0.00 0.00 3.71
4424 8990 1.511305 GCCGGATGACAAGACTCGA 59.489 57.895 5.05 0.00 0.00 4.04
4425 8991 1.519455 GGCCGGATGACAAGACTCG 60.519 63.158 5.05 0.00 0.00 4.18
4426 8992 0.179097 GAGGCCGGATGACAAGACTC 60.179 60.000 5.05 0.00 0.00 3.36
4427 8993 0.616111 AGAGGCCGGATGACAAGACT 60.616 55.000 5.05 0.00 0.00 3.24
4428 8994 0.179097 GAGAGGCCGGATGACAAGAC 60.179 60.000 5.05 0.00 0.00 3.01
4429 8995 0.324738 AGAGAGGCCGGATGACAAGA 60.325 55.000 5.05 0.00 0.00 3.02
4430 8996 0.103937 GAGAGAGGCCGGATGACAAG 59.896 60.000 5.05 0.00 0.00 3.16
4431 8997 1.330655 GGAGAGAGGCCGGATGACAA 61.331 60.000 5.05 0.00 0.00 3.18
4432 8998 1.758514 GGAGAGAGGCCGGATGACA 60.759 63.158 5.05 0.00 0.00 3.58
4433 8999 1.743321 CTGGAGAGAGGCCGGATGAC 61.743 65.000 5.05 0.00 33.45 3.06
4434 9000 1.456518 CTGGAGAGAGGCCGGATGA 60.457 63.158 5.05 0.00 33.45 2.92
4435 9001 3.136750 CTGGAGAGAGGCCGGATG 58.863 66.667 5.05 0.00 33.45 3.51
4436 9002 2.841988 GCTGGAGAGAGGCCGGAT 60.842 66.667 5.05 0.00 33.45 4.18
4440 9006 0.762461 ATACTGGCTGGAGAGAGGCC 60.762 60.000 0.00 0.00 45.45 5.19
4441 9007 1.127343 AATACTGGCTGGAGAGAGGC 58.873 55.000 0.00 0.00 38.99 4.70
4442 9008 3.070302 GGTAAATACTGGCTGGAGAGAGG 59.930 52.174 0.00 0.00 0.00 3.69
4443 9009 3.070302 GGGTAAATACTGGCTGGAGAGAG 59.930 52.174 0.00 0.00 0.00 3.20
4444 9010 3.039011 GGGTAAATACTGGCTGGAGAGA 58.961 50.000 0.00 0.00 0.00 3.10
4445 9011 2.104963 GGGGTAAATACTGGCTGGAGAG 59.895 54.545 0.00 0.00 0.00 3.20
4446 9012 2.124411 GGGGTAAATACTGGCTGGAGA 58.876 52.381 0.00 0.00 0.00 3.71
4447 9013 2.127708 AGGGGTAAATACTGGCTGGAG 58.872 52.381 0.00 0.00 0.00 3.86
4448 9014 2.280308 AGGGGTAAATACTGGCTGGA 57.720 50.000 0.00 0.00 0.00 3.86
4449 9015 3.650942 TCATAGGGGTAAATACTGGCTGG 59.349 47.826 0.00 0.00 0.00 4.85
4450 9016 4.974645 TCATAGGGGTAAATACTGGCTG 57.025 45.455 0.00 0.00 0.00 4.85
4451 9017 4.975794 AGTTCATAGGGGTAAATACTGGCT 59.024 41.667 0.00 0.00 0.00 4.75
4452 9018 5.306114 AGTTCATAGGGGTAAATACTGGC 57.694 43.478 0.00 0.00 0.00 4.85
4453 9019 7.444487 GCTAAAGTTCATAGGGGTAAATACTGG 59.556 40.741 0.00 0.00 0.00 4.00
4454 9020 8.211629 AGCTAAAGTTCATAGGGGTAAATACTG 58.788 37.037 0.00 0.00 0.00 2.74
4455 9021 8.333226 AGCTAAAGTTCATAGGGGTAAATACT 57.667 34.615 0.00 0.00 0.00 2.12
4456 9022 7.384387 CGAGCTAAAGTTCATAGGGGTAAATAC 59.616 40.741 0.00 0.00 0.00 1.89
4457 9023 7.070322 ACGAGCTAAAGTTCATAGGGGTAAATA 59.930 37.037 0.00 0.00 0.00 1.40
4458 9024 6.126854 ACGAGCTAAAGTTCATAGGGGTAAAT 60.127 38.462 0.00 0.00 0.00 1.40
4459 9025 5.188359 ACGAGCTAAAGTTCATAGGGGTAAA 59.812 40.000 0.00 0.00 0.00 2.01
4460 9026 4.713321 ACGAGCTAAAGTTCATAGGGGTAA 59.287 41.667 0.00 0.00 0.00 2.85
4461 9027 4.284178 ACGAGCTAAAGTTCATAGGGGTA 58.716 43.478 0.00 0.00 0.00 3.69
4462 9028 3.105283 ACGAGCTAAAGTTCATAGGGGT 58.895 45.455 0.00 0.00 0.00 4.95
4463 9029 3.821421 ACGAGCTAAAGTTCATAGGGG 57.179 47.619 0.00 0.00 0.00 4.79
4464 9030 5.657474 TGTTACGAGCTAAAGTTCATAGGG 58.343 41.667 0.00 0.00 0.00 3.53
4465 9031 7.277981 ACATTGTTACGAGCTAAAGTTCATAGG 59.722 37.037 0.00 0.00 0.00 2.57
4466 9032 8.110612 CACATTGTTACGAGCTAAAGTTCATAG 58.889 37.037 0.00 0.00 0.00 2.23
4467 9033 7.815549 TCACATTGTTACGAGCTAAAGTTCATA 59.184 33.333 0.00 0.00 0.00 2.15
4468 9034 6.649141 TCACATTGTTACGAGCTAAAGTTCAT 59.351 34.615 0.00 0.00 0.00 2.57
4469 9035 5.986741 TCACATTGTTACGAGCTAAAGTTCA 59.013 36.000 0.00 0.00 0.00 3.18
4470 9036 6.462073 TCACATTGTTACGAGCTAAAGTTC 57.538 37.500 0.00 0.00 0.00 3.01
4471 9037 5.107065 GCTCACATTGTTACGAGCTAAAGTT 60.107 40.000 16.34 0.00 45.86 2.66
4472 9038 4.389077 GCTCACATTGTTACGAGCTAAAGT 59.611 41.667 16.34 0.00 45.86 2.66
4473 9039 4.886971 GCTCACATTGTTACGAGCTAAAG 58.113 43.478 16.34 0.00 45.86 1.85
4474 9040 4.921470 GCTCACATTGTTACGAGCTAAA 57.079 40.909 16.34 0.00 45.86 1.85
4479 9045 6.495706 TCATAGTAGCTCACATTGTTACGAG 58.504 40.000 0.00 0.00 0.00 4.18
4480 9046 6.445357 TCATAGTAGCTCACATTGTTACGA 57.555 37.500 0.00 0.00 0.00 3.43
4481 9047 6.918022 TGATCATAGTAGCTCACATTGTTACG 59.082 38.462 0.00 0.00 0.00 3.18
4482 9048 7.923344 ACTGATCATAGTAGCTCACATTGTTAC 59.077 37.037 0.00 0.00 0.00 2.50
4483 9049 7.922811 CACTGATCATAGTAGCTCACATTGTTA 59.077 37.037 0.00 0.00 0.00 2.41
4484 9050 6.760298 CACTGATCATAGTAGCTCACATTGTT 59.240 38.462 0.00 0.00 0.00 2.83
4485 9051 6.097412 TCACTGATCATAGTAGCTCACATTGT 59.903 38.462 0.00 0.00 0.00 2.71
4486 9052 6.510536 TCACTGATCATAGTAGCTCACATTG 58.489 40.000 0.00 0.00 0.00 2.82
4487 9053 6.548993 TCTCACTGATCATAGTAGCTCACATT 59.451 38.462 0.00 0.00 0.00 2.71
4488 9054 6.067350 TCTCACTGATCATAGTAGCTCACAT 58.933 40.000 0.00 0.00 0.00 3.21
4489 9055 5.440610 TCTCACTGATCATAGTAGCTCACA 58.559 41.667 0.00 0.00 0.00 3.58
4490 9056 5.530915 ACTCTCACTGATCATAGTAGCTCAC 59.469 44.000 0.00 0.00 0.00 3.51
4491 9057 5.689835 ACTCTCACTGATCATAGTAGCTCA 58.310 41.667 0.00 0.00 0.00 4.26
4492 9058 5.181245 GGACTCTCACTGATCATAGTAGCTC 59.819 48.000 0.00 0.00 0.00 4.09
4493 9059 5.070001 GGACTCTCACTGATCATAGTAGCT 58.930 45.833 0.00 0.00 0.00 3.32
4494 9060 4.824537 TGGACTCTCACTGATCATAGTAGC 59.175 45.833 0.00 0.00 0.00 3.58
4495 9061 5.048782 GCTGGACTCTCACTGATCATAGTAG 60.049 48.000 0.00 0.00 0.00 2.57
4496 9062 4.824537 GCTGGACTCTCACTGATCATAGTA 59.175 45.833 0.00 0.00 0.00 1.82
4497 9063 3.636300 GCTGGACTCTCACTGATCATAGT 59.364 47.826 0.00 0.00 0.00 2.12
4498 9064 3.304592 CGCTGGACTCTCACTGATCATAG 60.305 52.174 0.00 0.00 0.00 2.23
4499 9065 2.620585 CGCTGGACTCTCACTGATCATA 59.379 50.000 0.00 0.00 0.00 2.15
4500 9066 1.408340 CGCTGGACTCTCACTGATCAT 59.592 52.381 0.00 0.00 0.00 2.45
4501 9067 0.813821 CGCTGGACTCTCACTGATCA 59.186 55.000 0.00 0.00 0.00 2.92
4502 9068 0.527385 GCGCTGGACTCTCACTGATC 60.527 60.000 0.00 0.00 0.00 2.92
4503 9069 1.253593 TGCGCTGGACTCTCACTGAT 61.254 55.000 9.73 0.00 0.00 2.90
4504 9070 1.871126 CTGCGCTGGACTCTCACTGA 61.871 60.000 9.73 0.00 0.00 3.41
4505 9071 1.445754 CTGCGCTGGACTCTCACTG 60.446 63.158 9.73 0.00 0.00 3.66
4506 9072 2.644212 CCTGCGCTGGACTCTCACT 61.644 63.158 27.72 0.00 0.00 3.41
4507 9073 2.125753 CCTGCGCTGGACTCTCAC 60.126 66.667 27.72 0.00 0.00 3.51
4508 9074 2.283173 TCCTGCGCTGGACTCTCA 60.283 61.111 29.82 8.95 0.00 3.27
4509 9075 2.493973 CTCCTGCGCTGGACTCTC 59.506 66.667 29.82 0.00 31.94 3.20
4510 9076 2.500815 TACCTCCTGCGCTGGACTCT 62.501 60.000 29.82 17.32 31.94 3.24
4511 9077 1.395826 ATACCTCCTGCGCTGGACTC 61.396 60.000 29.82 0.00 31.94 3.36
4512 9078 0.106167 TATACCTCCTGCGCTGGACT 60.106 55.000 29.82 19.90 31.94 3.85
4513 9079 0.032267 GTATACCTCCTGCGCTGGAC 59.968 60.000 29.82 16.91 31.94 4.02
4514 9080 0.106167 AGTATACCTCCTGCGCTGGA 60.106 55.000 30.96 30.96 34.52 3.86
4515 9081 1.617322 TAGTATACCTCCTGCGCTGG 58.383 55.000 26.06 26.06 0.00 4.85
4516 9082 3.255888 TGATTAGTATACCTCCTGCGCTG 59.744 47.826 9.73 8.47 0.00 5.18
4517 9083 3.497332 TGATTAGTATACCTCCTGCGCT 58.503 45.455 9.73 0.00 0.00 5.92
4518 9084 3.936372 TGATTAGTATACCTCCTGCGC 57.064 47.619 0.00 0.00 0.00 6.09
4519 9085 5.644977 TGATGATTAGTATACCTCCTGCG 57.355 43.478 0.00 0.00 0.00 5.18
4520 9086 6.820656 CCATTGATGATTAGTATACCTCCTGC 59.179 42.308 0.00 0.00 0.00 4.85
4521 9087 7.911651 ACCATTGATGATTAGTATACCTCCTG 58.088 38.462 0.00 0.00 0.00 3.86
4522 9088 9.615660 TTACCATTGATGATTAGTATACCTCCT 57.384 33.333 0.00 0.00 0.00 3.69
4529 9095 8.978874 TGCACTTTACCATTGATGATTAGTAT 57.021 30.769 0.00 0.00 0.00 2.12
4530 9096 8.673711 GTTGCACTTTACCATTGATGATTAGTA 58.326 33.333 0.00 0.00 0.00 1.82
4531 9097 7.362920 GGTTGCACTTTACCATTGATGATTAGT 60.363 37.037 0.21 0.00 34.48 2.24
4532 9098 6.974622 GGTTGCACTTTACCATTGATGATTAG 59.025 38.462 0.21 0.00 34.48 1.73
4533 9099 6.435591 TGGTTGCACTTTACCATTGATGATTA 59.564 34.615 3.79 0.00 39.44 1.75
4534 9100 5.245751 TGGTTGCACTTTACCATTGATGATT 59.754 36.000 3.79 0.00 39.44 2.57
4535 9101 4.771577 TGGTTGCACTTTACCATTGATGAT 59.228 37.500 3.79 0.00 39.44 2.45
4536 9102 4.148079 TGGTTGCACTTTACCATTGATGA 58.852 39.130 3.79 0.00 39.44 2.92
4537 9103 4.517952 TGGTTGCACTTTACCATTGATG 57.482 40.909 3.79 0.00 39.44 3.07
4538 9104 5.070313 ACTTTGGTTGCACTTTACCATTGAT 59.930 36.000 8.77 0.00 43.56 2.57
4539 9105 4.404073 ACTTTGGTTGCACTTTACCATTGA 59.596 37.500 8.77 0.00 43.56 2.57
4540 9106 4.692228 ACTTTGGTTGCACTTTACCATTG 58.308 39.130 8.77 7.45 43.56 2.82
4541 9107 5.596772 ACTACTTTGGTTGCACTTTACCATT 59.403 36.000 8.77 0.39 43.56 3.16
4542 9108 5.137551 ACTACTTTGGTTGCACTTTACCAT 58.862 37.500 8.77 0.00 43.56 3.55
4543 9109 4.528920 ACTACTTTGGTTGCACTTTACCA 58.471 39.130 3.79 3.79 42.48 3.25
4544 9110 4.023450 GGACTACTTTGGTTGCACTTTACC 60.023 45.833 0.00 0.00 34.93 2.85
4545 9111 4.577283 TGGACTACTTTGGTTGCACTTTAC 59.423 41.667 0.00 0.00 0.00 2.01
4546 9112 4.783055 TGGACTACTTTGGTTGCACTTTA 58.217 39.130 0.00 0.00 0.00 1.85
4547 9113 3.626930 TGGACTACTTTGGTTGCACTTT 58.373 40.909 0.00 0.00 0.00 2.66
4548 9114 3.118038 TCTGGACTACTTTGGTTGCACTT 60.118 43.478 0.00 0.00 0.00 3.16
4549 9115 2.438021 TCTGGACTACTTTGGTTGCACT 59.562 45.455 0.00 0.00 0.00 4.40
4550 9116 2.846193 TCTGGACTACTTTGGTTGCAC 58.154 47.619 0.00 0.00 0.00 4.57
4551 9117 3.135712 TCTTCTGGACTACTTTGGTTGCA 59.864 43.478 0.00 0.00 0.00 4.08
4552 9118 3.498777 GTCTTCTGGACTACTTTGGTTGC 59.501 47.826 0.00 0.00 41.46 4.17
4553 9119 4.703897 TGTCTTCTGGACTACTTTGGTTG 58.296 43.478 0.00 0.00 44.74 3.77
4554 9120 5.367945 TTGTCTTCTGGACTACTTTGGTT 57.632 39.130 0.00 0.00 44.74 3.67
4555 9121 5.568620 ATTGTCTTCTGGACTACTTTGGT 57.431 39.130 0.00 0.00 44.74 3.67
4556 9122 7.278868 GTCATATTGTCTTCTGGACTACTTTGG 59.721 40.741 0.00 0.00 44.74 3.28
4557 9123 7.819415 TGTCATATTGTCTTCTGGACTACTTTG 59.181 37.037 0.00 0.00 44.74 2.77
4558 9124 7.907389 TGTCATATTGTCTTCTGGACTACTTT 58.093 34.615 0.00 0.00 44.74 2.66
4559 9125 7.482169 TGTCATATTGTCTTCTGGACTACTT 57.518 36.000 0.00 0.00 44.74 2.24
4560 9126 7.482169 TTGTCATATTGTCTTCTGGACTACT 57.518 36.000 0.00 0.00 44.74 2.57
4561 9127 6.256757 GCTTGTCATATTGTCTTCTGGACTAC 59.743 42.308 0.00 0.00 44.74 2.73
4562 9128 6.341316 GCTTGTCATATTGTCTTCTGGACTA 58.659 40.000 0.00 0.00 44.74 2.59
4563 9129 5.181748 GCTTGTCATATTGTCTTCTGGACT 58.818 41.667 0.00 0.00 44.74 3.85
4564 9130 4.333926 GGCTTGTCATATTGTCTTCTGGAC 59.666 45.833 0.00 0.00 44.70 4.02
4565 9131 4.517285 GGCTTGTCATATTGTCTTCTGGA 58.483 43.478 0.00 0.00 0.00 3.86
4566 9132 3.310774 CGGCTTGTCATATTGTCTTCTGG 59.689 47.826 0.00 0.00 0.00 3.86
4567 9133 3.310774 CCGGCTTGTCATATTGTCTTCTG 59.689 47.826 0.00 0.00 0.00 3.02
4568 9134 3.535561 CCGGCTTGTCATATTGTCTTCT 58.464 45.455 0.00 0.00 0.00 2.85
4569 9135 2.032178 GCCGGCTTGTCATATTGTCTTC 59.968 50.000 22.15 0.00 0.00 2.87
4570 9136 2.017049 GCCGGCTTGTCATATTGTCTT 58.983 47.619 22.15 0.00 0.00 3.01
4571 9137 1.668419 GCCGGCTTGTCATATTGTCT 58.332 50.000 22.15 0.00 0.00 3.41
4572 9138 0.304705 CGCCGGCTTGTCATATTGTC 59.695 55.000 26.68 0.00 0.00 3.18
4573 9139 0.107897 TCGCCGGCTTGTCATATTGT 60.108 50.000 26.68 0.00 0.00 2.71
4574 9140 1.013596 TTCGCCGGCTTGTCATATTG 58.986 50.000 26.68 4.37 0.00 1.90
4575 9141 1.967319 ATTCGCCGGCTTGTCATATT 58.033 45.000 26.68 0.00 0.00 1.28
4576 9142 2.831685 TATTCGCCGGCTTGTCATAT 57.168 45.000 26.68 9.14 0.00 1.78
4577 9143 2.605837 TTATTCGCCGGCTTGTCATA 57.394 45.000 26.68 10.07 0.00 2.15
4578 9144 1.670811 CTTTATTCGCCGGCTTGTCAT 59.329 47.619 26.68 11.09 0.00 3.06
4579 9145 1.083489 CTTTATTCGCCGGCTTGTCA 58.917 50.000 26.68 2.12 0.00 3.58
4580 9146 0.377203 CCTTTATTCGCCGGCTTGTC 59.623 55.000 26.68 0.00 0.00 3.18
4581 9147 0.322187 ACCTTTATTCGCCGGCTTGT 60.322 50.000 26.68 12.22 0.00 3.16
4582 9148 0.098728 CACCTTTATTCGCCGGCTTG 59.901 55.000 26.68 10.37 0.00 4.01
4583 9149 0.035820 TCACCTTTATTCGCCGGCTT 60.036 50.000 26.68 11.84 0.00 4.35
4584 9150 0.035820 TTCACCTTTATTCGCCGGCT 60.036 50.000 26.68 8.66 0.00 5.52
4585 9151 0.806241 TTTCACCTTTATTCGCCGGC 59.194 50.000 19.07 19.07 0.00 6.13
4586 9152 1.202143 GCTTTCACCTTTATTCGCCGG 60.202 52.381 0.00 0.00 0.00 6.13
4587 9153 1.466950 TGCTTTCACCTTTATTCGCCG 59.533 47.619 0.00 0.00 0.00 6.46
4588 9154 3.569250 TTGCTTTCACCTTTATTCGCC 57.431 42.857 0.00 0.00 0.00 5.54
4589 9155 3.920412 CCTTTGCTTTCACCTTTATTCGC 59.080 43.478 0.00 0.00 0.00 4.70
4590 9156 5.121221 ACCTTTGCTTTCACCTTTATTCG 57.879 39.130 0.00 0.00 0.00 3.34
4591 9157 6.749139 AGAACCTTTGCTTTCACCTTTATTC 58.251 36.000 0.00 0.00 0.00 1.75
4592 9158 6.731292 AGAACCTTTGCTTTCACCTTTATT 57.269 33.333 0.00 0.00 0.00 1.40
4593 9159 6.731292 AAGAACCTTTGCTTTCACCTTTAT 57.269 33.333 0.00 0.00 0.00 1.40
4594 9160 7.504238 TGATAAGAACCTTTGCTTTCACCTTTA 59.496 33.333 0.00 0.00 0.00 1.85
4595 9161 6.323739 TGATAAGAACCTTTGCTTTCACCTTT 59.676 34.615 0.00 0.00 0.00 3.11
4596 9162 5.833131 TGATAAGAACCTTTGCTTTCACCTT 59.167 36.000 0.00 0.00 0.00 3.50
4597 9163 5.385198 TGATAAGAACCTTTGCTTTCACCT 58.615 37.500 0.00 0.00 0.00 4.00
4598 9164 5.705609 TGATAAGAACCTTTGCTTTCACC 57.294 39.130 0.00 0.00 0.00 4.02
4599 9165 5.631096 GCTTGATAAGAACCTTTGCTTTCAC 59.369 40.000 0.00 0.00 0.00 3.18
4600 9166 5.301551 TGCTTGATAAGAACCTTTGCTTTCA 59.698 36.000 0.00 0.00 0.00 2.69
4601 9167 5.772521 TGCTTGATAAGAACCTTTGCTTTC 58.227 37.500 0.00 0.00 0.00 2.62
4602 9168 5.789643 TGCTTGATAAGAACCTTTGCTTT 57.210 34.783 0.00 0.00 0.00 3.51
4603 9169 5.068987 TGTTGCTTGATAAGAACCTTTGCTT 59.931 36.000 0.00 0.00 0.00 3.91
4604 9170 4.584325 TGTTGCTTGATAAGAACCTTTGCT 59.416 37.500 0.00 0.00 0.00 3.91
4605 9171 4.870363 TGTTGCTTGATAAGAACCTTTGC 58.130 39.130 0.00 0.00 0.00 3.68
4606 9172 6.418819 CAGTTGTTGCTTGATAAGAACCTTTG 59.581 38.462 0.00 0.00 33.29 2.77
4607 9173 6.321181 TCAGTTGTTGCTTGATAAGAACCTTT 59.679 34.615 0.00 0.00 33.29 3.11
4608 9174 5.827797 TCAGTTGTTGCTTGATAAGAACCTT 59.172 36.000 0.00 0.00 33.29 3.50
4609 9175 5.376625 TCAGTTGTTGCTTGATAAGAACCT 58.623 37.500 0.00 0.00 33.29 3.50
4610 9176 5.689383 TCAGTTGTTGCTTGATAAGAACC 57.311 39.130 0.00 0.00 33.29 3.62
4611 9177 6.494842 TGTTCAGTTGTTGCTTGATAAGAAC 58.505 36.000 0.00 0.00 33.09 3.01
4612 9178 6.691754 TGTTCAGTTGTTGCTTGATAAGAA 57.308 33.333 0.00 0.00 0.00 2.52
4613 9179 6.542005 TCTTGTTCAGTTGTTGCTTGATAAGA 59.458 34.615 0.00 0.00 0.00 2.10
4614 9180 6.728200 TCTTGTTCAGTTGTTGCTTGATAAG 58.272 36.000 0.00 0.00 0.00 1.73
4615 9181 6.691754 TCTTGTTCAGTTGTTGCTTGATAA 57.308 33.333 0.00 0.00 0.00 1.75
4616 9182 6.262944 ACATCTTGTTCAGTTGTTGCTTGATA 59.737 34.615 0.00 0.00 32.29 2.15
4617 9183 5.068198 ACATCTTGTTCAGTTGTTGCTTGAT 59.932 36.000 0.00 0.00 32.29 2.57
4618 9184 4.398988 ACATCTTGTTCAGTTGTTGCTTGA 59.601 37.500 0.00 0.00 32.29 3.02
4619 9185 4.675510 ACATCTTGTTCAGTTGTTGCTTG 58.324 39.130 0.00 0.00 32.29 4.01
4620 9186 4.989279 ACATCTTGTTCAGTTGTTGCTT 57.011 36.364 0.00 0.00 32.29 3.91
4621 9187 4.989279 AACATCTTGTTCAGTTGTTGCT 57.011 36.364 0.00 0.00 41.84 3.91
4632 9198 5.308237 AGGGAGTAGTTCTGAACATCTTGTT 59.692 40.000 21.50 2.72 44.37 2.83
4633 9199 4.841246 AGGGAGTAGTTCTGAACATCTTGT 59.159 41.667 21.50 3.41 0.00 3.16
4634 9200 5.413309 AGGGAGTAGTTCTGAACATCTTG 57.587 43.478 21.50 0.00 0.00 3.02
4635 9201 4.468153 GGAGGGAGTAGTTCTGAACATCTT 59.532 45.833 21.50 4.46 0.00 2.40
4636 9202 4.027437 GGAGGGAGTAGTTCTGAACATCT 58.973 47.826 21.50 17.39 0.00 2.90
4637 9203 3.181485 CGGAGGGAGTAGTTCTGAACATC 60.181 52.174 21.50 15.17 0.00 3.06
4638 9204 2.761208 CGGAGGGAGTAGTTCTGAACAT 59.239 50.000 21.50 7.83 0.00 2.71
4639 9205 2.168496 CGGAGGGAGTAGTTCTGAACA 58.832 52.381 21.50 6.02 0.00 3.18
4640 9206 2.169330 ACGGAGGGAGTAGTTCTGAAC 58.831 52.381 12.54 12.54 0.00 3.18
4641 9207 2.599408 ACGGAGGGAGTAGTTCTGAA 57.401 50.000 0.00 0.00 0.00 3.02
4642 9208 2.444421 GAACGGAGGGAGTAGTTCTGA 58.556 52.381 0.55 0.00 39.66 3.27
4643 9209 1.477295 GGAACGGAGGGAGTAGTTCTG 59.523 57.143 7.05 0.00 41.72 3.02
4644 9210 1.076677 TGGAACGGAGGGAGTAGTTCT 59.923 52.381 7.05 0.00 41.72 3.01
4645 9211 1.553706 TGGAACGGAGGGAGTAGTTC 58.446 55.000 0.00 0.00 41.40 3.01
4646 9212 2.019807 TTGGAACGGAGGGAGTAGTT 57.980 50.000 0.00 0.00 0.00 2.24
4647 9213 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
4648 9214 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
4649 9215 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
4650 9216 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
4651 9217 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4652 9218 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4653 9219 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4654 9220 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
4655 9221 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
4656 9222 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
4657 9223 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
4658 9224 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
4659 9225 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
4660 9226 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
4661 9227 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
4662 9228 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
4669 9235 9.915629 CTAAGTTAGTACAAAGTTGAGTCATCT 57.084 33.333 1.40 0.00 0.00 2.90
4670 9236 9.694137 ACTAAGTTAGTACAAAGTTGAGTCATC 57.306 33.333 14.00 0.00 37.23 2.92
4685 9251 8.571336 GGTGACTCAACTTGTACTAAGTTAGTA 58.429 37.037 17.12 17.12 38.32 1.82
4686 9252 7.287235 AGGTGACTCAACTTGTACTAAGTTAGT 59.713 37.037 19.15 19.15 38.32 2.24
4687 9253 7.659186 AGGTGACTCAACTTGTACTAAGTTAG 58.341 38.462 17.39 8.41 38.32 2.34
4688 9254 7.592885 AGGTGACTCAACTTGTACTAAGTTA 57.407 36.000 17.39 9.48 38.32 2.24
4689 9255 6.481434 AGGTGACTCAACTTGTACTAAGTT 57.519 37.500 14.04 14.04 40.80 2.66
4690 9256 7.778185 ATAGGTGACTCAACTTGTACTAAGT 57.222 36.000 0.84 0.00 43.67 2.24
4691 9257 9.490379 AAAATAGGTGACTCAACTTGTACTAAG 57.510 33.333 0.84 0.00 43.67 2.18
4692 9258 9.268268 CAAAATAGGTGACTCAACTTGTACTAA 57.732 33.333 0.84 0.00 43.67 2.24
4693 9259 7.876068 CCAAAATAGGTGACTCAACTTGTACTA 59.124 37.037 0.84 0.00 43.67 1.82
4694 9260 6.710744 CCAAAATAGGTGACTCAACTTGTACT 59.289 38.462 0.84 0.00 43.67 2.73
4695 9261 6.708949 TCCAAAATAGGTGACTCAACTTGTAC 59.291 38.462 0.84 0.00 43.67 2.90
4696 9262 6.833041 TCCAAAATAGGTGACTCAACTTGTA 58.167 36.000 0.84 0.00 43.67 2.41
4697 9263 5.690865 TCCAAAATAGGTGACTCAACTTGT 58.309 37.500 0.84 0.00 43.67 3.16
4698 9264 6.438763 GTTCCAAAATAGGTGACTCAACTTG 58.561 40.000 0.84 0.00 43.67 3.16
4699 9265 5.238650 CGTTCCAAAATAGGTGACTCAACTT 59.761 40.000 0.84 0.00 43.67 2.66
4700 9266 4.755123 CGTTCCAAAATAGGTGACTCAACT 59.245 41.667 1.31 1.31 43.67 3.16
4701 9267 4.083484 CCGTTCCAAAATAGGTGACTCAAC 60.083 45.833 0.00 0.00 43.67 3.18
4702 9268 4.069304 CCGTTCCAAAATAGGTGACTCAA 58.931 43.478 0.00 0.00 43.67 3.02
4703 9269 3.325425 TCCGTTCCAAAATAGGTGACTCA 59.675 43.478 0.00 0.00 43.67 3.41
4704 9270 3.933332 CTCCGTTCCAAAATAGGTGACTC 59.067 47.826 0.00 0.00 43.67 3.36
4706 9272 3.007635 CCTCCGTTCCAAAATAGGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4707 9273 2.026636 CCCTCCGTTCCAAAATAGGTGA 60.027 50.000 0.00 0.00 0.00 4.02
4708 9274 2.026636 TCCCTCCGTTCCAAAATAGGTG 60.027 50.000 0.00 0.00 0.00 4.00
4709 9275 2.238898 CTCCCTCCGTTCCAAAATAGGT 59.761 50.000 0.00 0.00 0.00 3.08
4710 9276 2.238898 ACTCCCTCCGTTCCAAAATAGG 59.761 50.000 0.00 0.00 0.00 2.57
4711 9277 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4712 9278 4.161001 GTCTACTCCCTCCGTTCCAAAATA 59.839 45.833 0.00 0.00 0.00 1.40
4713 9279 3.055312 GTCTACTCCCTCCGTTCCAAAAT 60.055 47.826 0.00 0.00 0.00 1.82
4714 9280 2.301009 GTCTACTCCCTCCGTTCCAAAA 59.699 50.000 0.00 0.00 0.00 2.44
4715 9281 1.897802 GTCTACTCCCTCCGTTCCAAA 59.102 52.381 0.00 0.00 0.00 3.28
4716 9282 1.553706 GTCTACTCCCTCCGTTCCAA 58.446 55.000 0.00 0.00 0.00 3.53
4717 9283 0.679002 CGTCTACTCCCTCCGTTCCA 60.679 60.000 0.00 0.00 0.00 3.53
4718 9284 0.679321 ACGTCTACTCCCTCCGTTCC 60.679 60.000 0.00 0.00 0.00 3.62
4719 9285 1.172175 AACGTCTACTCCCTCCGTTC 58.828 55.000 0.00 0.00 37.16 3.95
4720 9286 2.026822 TCTAACGTCTACTCCCTCCGTT 60.027 50.000 0.00 0.00 43.35 4.44
4721 9287 1.556911 TCTAACGTCTACTCCCTCCGT 59.443 52.381 0.00 0.00 0.00 4.69
4722 9288 1.939255 GTCTAACGTCTACTCCCTCCG 59.061 57.143 0.00 0.00 0.00 4.63
4723 9289 1.939255 CGTCTAACGTCTACTCCCTCC 59.061 57.143 0.00 0.00 36.74 4.30
4724 9290 2.865551 CTCGTCTAACGTCTACTCCCTC 59.134 54.545 0.00 0.00 43.14 4.30
4725 9291 2.499289 TCTCGTCTAACGTCTACTCCCT 59.501 50.000 0.00 0.00 43.14 4.20
4726 9292 2.898705 TCTCGTCTAACGTCTACTCCC 58.101 52.381 0.00 0.00 43.14 4.30
4727 9293 3.681897 TGTTCTCGTCTAACGTCTACTCC 59.318 47.826 0.00 0.00 43.14 3.85
4728 9294 4.388469 AGTGTTCTCGTCTAACGTCTACTC 59.612 45.833 0.00 0.00 43.14 2.59
4729 9295 4.314121 AGTGTTCTCGTCTAACGTCTACT 58.686 43.478 0.00 0.00 43.14 2.57
4730 9296 4.660352 AGTGTTCTCGTCTAACGTCTAC 57.340 45.455 0.00 0.00 43.14 2.59
4731 9297 4.867047 CCTAGTGTTCTCGTCTAACGTCTA 59.133 45.833 0.00 0.00 43.14 2.59
4732 9298 3.683822 CCTAGTGTTCTCGTCTAACGTCT 59.316 47.826 0.00 0.00 43.14 4.18
4733 9299 3.681897 TCCTAGTGTTCTCGTCTAACGTC 59.318 47.826 0.00 0.00 43.14 4.34
4734 9300 3.434984 GTCCTAGTGTTCTCGTCTAACGT 59.565 47.826 0.00 0.00 43.14 3.99
4735 9301 3.683822 AGTCCTAGTGTTCTCGTCTAACG 59.316 47.826 0.00 0.00 44.19 3.18
4736 9302 6.734104 TTAGTCCTAGTGTTCTCGTCTAAC 57.266 41.667 0.00 0.00 0.00 2.34
4737 9303 7.750229 TTTTAGTCCTAGTGTTCTCGTCTAA 57.250 36.000 0.00 0.00 0.00 2.10
4738 9304 7.574592 GCTTTTTAGTCCTAGTGTTCTCGTCTA 60.575 40.741 0.00 0.00 0.00 2.59
4739 9305 6.645790 TTTTTAGTCCTAGTGTTCTCGTCT 57.354 37.500 0.00 0.00 0.00 4.18
4740 9306 5.345472 GCTTTTTAGTCCTAGTGTTCTCGTC 59.655 44.000 0.00 0.00 0.00 4.20
4741 9307 5.010820 AGCTTTTTAGTCCTAGTGTTCTCGT 59.989 40.000 0.00 0.00 0.00 4.18
4742 9308 5.471257 AGCTTTTTAGTCCTAGTGTTCTCG 58.529 41.667 0.00 0.00 0.00 4.04
4743 9309 7.731882 AAAGCTTTTTAGTCCTAGTGTTCTC 57.268 36.000 5.69 0.00 0.00 2.87
4744 9310 8.648693 TCTAAAGCTTTTTAGTCCTAGTGTTCT 58.351 33.333 18.47 0.00 36.26 3.01
4745 9311 8.828688 TCTAAAGCTTTTTAGTCCTAGTGTTC 57.171 34.615 18.47 0.00 36.26 3.18
4746 9312 9.794719 ATTCTAAAGCTTTTTAGTCCTAGTGTT 57.205 29.630 18.47 0.00 36.26 3.32
4747 9313 9.220767 CATTCTAAAGCTTTTTAGTCCTAGTGT 57.779 33.333 18.47 0.00 36.26 3.55
4748 9314 9.436957 TCATTCTAAAGCTTTTTAGTCCTAGTG 57.563 33.333 18.47 1.85 36.26 2.74
4749 9315 9.438228 GTCATTCTAAAGCTTTTTAGTCCTAGT 57.562 33.333 18.47 0.00 36.26 2.57
4750 9316 9.436957 TGTCATTCTAAAGCTTTTTAGTCCTAG 57.563 33.333 18.47 6.01 36.26 3.02
4751 9317 9.787435 TTGTCATTCTAAAGCTTTTTAGTCCTA 57.213 29.630 18.47 0.00 36.26 2.94
4752 9318 8.691661 TTGTCATTCTAAAGCTTTTTAGTCCT 57.308 30.769 18.47 0.00 36.26 3.85
4753 9319 7.539022 GCTTGTCATTCTAAAGCTTTTTAGTCC 59.461 37.037 18.47 1.58 42.40 3.85
4754 9320 8.076178 TGCTTGTCATTCTAAAGCTTTTTAGTC 58.924 33.333 18.47 3.67 45.21 2.59
4755 9321 7.940850 TGCTTGTCATTCTAAAGCTTTTTAGT 58.059 30.769 18.47 0.00 45.21 2.24
4756 9322 7.061557 GCTGCTTGTCATTCTAAAGCTTTTTAG 59.938 37.037 18.47 9.87 45.21 1.85
4757 9323 6.863126 GCTGCTTGTCATTCTAAAGCTTTTTA 59.137 34.615 18.47 2.87 45.21 1.52
4758 9324 5.693555 GCTGCTTGTCATTCTAAAGCTTTTT 59.306 36.000 18.47 0.00 45.21 1.94
4759 9325 5.010415 AGCTGCTTGTCATTCTAAAGCTTTT 59.990 36.000 18.47 1.58 45.21 2.27
4760 9326 4.522022 AGCTGCTTGTCATTCTAAAGCTTT 59.478 37.500 17.30 17.30 45.21 3.51
4761 9327 4.077822 AGCTGCTTGTCATTCTAAAGCTT 58.922 39.130 0.00 0.00 45.21 3.74
4762 9328 3.683802 AGCTGCTTGTCATTCTAAAGCT 58.316 40.909 0.00 0.00 45.21 3.74
4763 9329 5.551760 TTAGCTGCTTGTCATTCTAAAGC 57.448 39.130 7.79 0.00 45.20 3.51
4764 9330 7.020010 CAGTTTAGCTGCTTGTCATTCTAAAG 58.980 38.462 7.79 0.00 38.52 1.85
4765 9331 6.072508 CCAGTTTAGCTGCTTGTCATTCTAAA 60.073 38.462 7.79 0.00 43.71 1.85
4766 9332 5.412594 CCAGTTTAGCTGCTTGTCATTCTAA 59.587 40.000 7.79 0.00 43.71 2.10
4767 9333 4.937620 CCAGTTTAGCTGCTTGTCATTCTA 59.062 41.667 7.79 0.00 43.71 2.10
4768 9334 3.755378 CCAGTTTAGCTGCTTGTCATTCT 59.245 43.478 7.79 0.00 43.71 2.40
4769 9335 3.503748 ACCAGTTTAGCTGCTTGTCATTC 59.496 43.478 7.79 0.00 43.71 2.67
4770 9336 3.490348 ACCAGTTTAGCTGCTTGTCATT 58.510 40.909 7.79 0.00 43.71 2.57
4771 9337 3.077359 GACCAGTTTAGCTGCTTGTCAT 58.923 45.455 7.79 0.00 43.71 3.06
4772 9338 2.494059 GACCAGTTTAGCTGCTTGTCA 58.506 47.619 7.79 0.00 43.71 3.58
4773 9339 1.807142 GGACCAGTTTAGCTGCTTGTC 59.193 52.381 7.79 5.64 43.71 3.18
4774 9340 1.421646 AGGACCAGTTTAGCTGCTTGT 59.578 47.619 7.79 0.00 43.71 3.16
4775 9341 1.808945 CAGGACCAGTTTAGCTGCTTG 59.191 52.381 7.79 0.00 43.71 4.01
4776 9342 1.271597 CCAGGACCAGTTTAGCTGCTT 60.272 52.381 7.79 0.00 43.71 3.91
4777 9343 0.326264 CCAGGACCAGTTTAGCTGCT 59.674 55.000 7.57 7.57 43.71 4.24
4778 9344 0.324943 TCCAGGACCAGTTTAGCTGC 59.675 55.000 0.00 0.00 43.71 5.25
4779 9345 1.625818 AGTCCAGGACCAGTTTAGCTG 59.374 52.381 16.72 0.00 44.63 4.24
4780 9346 2.031495 AGTCCAGGACCAGTTTAGCT 57.969 50.000 16.72 0.00 32.18 3.32
4781 9347 2.303311 AGAAGTCCAGGACCAGTTTAGC 59.697 50.000 16.72 0.00 32.18 3.09
4782 9348 3.307059 CCAGAAGTCCAGGACCAGTTTAG 60.307 52.174 16.72 0.36 32.18 1.85
4783 9349 2.637872 CCAGAAGTCCAGGACCAGTTTA 59.362 50.000 16.72 0.00 32.18 2.01
4784 9350 1.421646 CCAGAAGTCCAGGACCAGTTT 59.578 52.381 16.72 3.58 32.18 2.66
4785 9351 1.059913 CCAGAAGTCCAGGACCAGTT 58.940 55.000 16.72 3.98 32.18 3.16
4786 9352 0.104934 ACCAGAAGTCCAGGACCAGT 60.105 55.000 16.72 1.53 32.18 4.00
4787 9353 1.059913 AACCAGAAGTCCAGGACCAG 58.940 55.000 16.72 3.73 32.18 4.00
4788 9354 2.409064 TAACCAGAAGTCCAGGACCA 57.591 50.000 16.72 0.00 32.18 4.02
4789 9355 3.409570 GTTTAACCAGAAGTCCAGGACC 58.590 50.000 16.72 1.54 32.18 4.46
4790 9356 3.064931 CGTTTAACCAGAAGTCCAGGAC 58.935 50.000 12.25 12.25 0.00 3.85
4791 9357 2.549349 GCGTTTAACCAGAAGTCCAGGA 60.549 50.000 0.00 0.00 0.00 3.86
4792 9358 1.804748 GCGTTTAACCAGAAGTCCAGG 59.195 52.381 0.00 0.00 0.00 4.45
4793 9359 1.459592 CGCGTTTAACCAGAAGTCCAG 59.540 52.381 0.00 0.00 0.00 3.86
4794 9360 1.068895 TCGCGTTTAACCAGAAGTCCA 59.931 47.619 5.77 0.00 0.00 4.02
4795 9361 1.787012 TCGCGTTTAACCAGAAGTCC 58.213 50.000 5.77 0.00 0.00 3.85
4796 9362 3.001533 TGTTTCGCGTTTAACCAGAAGTC 59.998 43.478 5.77 0.00 0.00 3.01
4797 9363 2.937799 TGTTTCGCGTTTAACCAGAAGT 59.062 40.909 5.77 0.00 0.00 3.01
4798 9364 3.595709 TGTTTCGCGTTTAACCAGAAG 57.404 42.857 5.77 0.00 0.00 2.85
4799 9365 4.555348 AATGTTTCGCGTTTAACCAGAA 57.445 36.364 5.77 0.00 0.00 3.02
4800 9366 5.866335 ATAATGTTTCGCGTTTAACCAGA 57.134 34.783 5.77 0.00 0.00 3.86
4801 9367 7.627340 AGATATAATGTTTCGCGTTTAACCAG 58.373 34.615 5.77 0.00 0.00 4.00
4802 9368 7.542534 AGATATAATGTTTCGCGTTTAACCA 57.457 32.000 5.77 0.00 0.00 3.67
4807 9373 8.009974 GCTGATAAGATATAATGTTTCGCGTTT 58.990 33.333 5.77 0.00 0.00 3.60
4808 9374 7.385205 AGCTGATAAGATATAATGTTTCGCGTT 59.615 33.333 5.77 0.00 0.00 4.84
4809 9375 6.868864 AGCTGATAAGATATAATGTTTCGCGT 59.131 34.615 5.77 0.00 0.00 6.01
4810 9376 7.062255 TGAGCTGATAAGATATAATGTTTCGCG 59.938 37.037 0.00 0.00 0.00 5.87
4811 9377 8.165428 GTGAGCTGATAAGATATAATGTTTCGC 58.835 37.037 0.00 0.00 0.00 4.70
4812 9378 9.196552 TGTGAGCTGATAAGATATAATGTTTCG 57.803 33.333 0.00 0.00 0.00 3.46
4814 9380 8.997323 GCTGTGAGCTGATAAGATATAATGTTT 58.003 33.333 0.00 0.00 38.45 2.83
4815 9381 8.545229 GCTGTGAGCTGATAAGATATAATGTT 57.455 34.615 0.00 0.00 38.45 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.