Multiple sequence alignment - TraesCS2A01G278100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G278100 chr2A 100.000 5101 0 0 1 5101 461028363 461033463 0.000000e+00 9420.0
1 TraesCS2A01G278100 chr2A 100.000 296 0 0 5316 5611 461033678 461033973 1.060000e-151 547.0
2 TraesCS2A01G278100 chr2A 92.308 130 8 2 2142 2270 606523804 606523676 3.450000e-42 183.0
3 TraesCS2A01G278100 chr2A 77.826 230 24 16 5322 5524 15013428 15013657 3.550000e-22 117.0
4 TraesCS2A01G278100 chr2D 93.584 2151 75 14 1 2141 347453781 347455878 0.000000e+00 3149.0
5 TraesCS2A01G278100 chr2D 94.427 1615 73 6 2259 3858 347455915 347457527 0.000000e+00 2468.0
6 TraesCS2A01G278100 chr2D 94.603 1260 45 12 3857 5101 347457609 347458860 0.000000e+00 1929.0
7 TraesCS2A01G278100 chr2D 91.538 130 10 1 2131 2260 443245921 443246049 1.610000e-40 178.0
8 TraesCS2A01G278100 chr2D 91.176 68 6 0 5460 5527 485647328 485647261 5.990000e-15 93.5
9 TraesCS2A01G278100 chr2B 93.665 1626 73 13 2259 3858 412745539 412747160 0.000000e+00 2405.0
10 TraesCS2A01G278100 chr2B 91.830 1432 59 13 1 1406 412743422 412744821 0.000000e+00 1943.0
11 TraesCS2A01G278100 chr2B 94.211 1261 51 10 3857 5101 412747242 412748496 0.000000e+00 1905.0
12 TraesCS2A01G278100 chr2B 94.085 710 23 2 1433 2141 412744811 412745502 0.000000e+00 1061.0
13 TraesCS2A01G278100 chr3B 86.697 436 36 6 3482 3899 769543861 769544292 1.100000e-126 464.0
14 TraesCS2A01G278100 chr3B 90.909 88 8 0 5524 5611 401795966 401795879 9.870000e-23 119.0
15 TraesCS2A01G278100 chr3B 89.773 88 9 0 5524 5611 321749441 321749354 4.590000e-21 113.0
16 TraesCS2A01G278100 chr3B 82.292 96 12 3 5434 5524 554995389 554995294 1.680000e-10 78.7
17 TraesCS2A01G278100 chr7D 93.333 120 6 2 2141 2259 417915548 417915430 5.780000e-40 176.0
18 TraesCS2A01G278100 chr7D 85.542 83 8 2 3295 3377 63446950 63446872 3.600000e-12 84.2
19 TraesCS2A01G278100 chr7A 90.909 132 8 4 2142 2271 674351201 674351072 2.080000e-39 174.0
20 TraesCS2A01G278100 chr7A 81.148 122 18 3 3295 3415 66237049 66236932 5.990000e-15 93.5
21 TraesCS2A01G278100 chr7A 75.877 228 27 14 5323 5523 619904668 619904442 2.150000e-14 91.6
22 TraesCS2A01G278100 chr7A 83.505 97 8 6 5434 5524 657524373 657524467 3.600000e-12 84.2
23 TraesCS2A01G278100 chr1D 90.299 134 11 2 2141 2273 116548458 116548326 2.080000e-39 174.0
24 TraesCS2A01G278100 chr1D 92.562 121 7 2 2142 2260 307235527 307235407 7.470000e-39 172.0
25 TraesCS2A01G278100 chr1D 89.888 89 9 0 5523 5611 127602041 127601953 1.280000e-21 115.0
26 TraesCS2A01G278100 chr1D 91.463 82 7 0 5524 5605 173008260 173008341 4.590000e-21 113.0
27 TraesCS2A01G278100 chr5D 91.870 123 9 1 2138 2260 2138696 2138575 2.690000e-38 171.0
28 TraesCS2A01G278100 chr5D 80.233 172 17 10 5371 5527 41433112 41432943 4.590000e-21 113.0
29 TraesCS2A01G278100 chr5D 85.714 70 7 3 5328 5394 104432811 104432880 2.800000e-08 71.3
30 TraesCS2A01G278100 chr3A 91.270 126 10 1 2134 2259 114241543 114241419 2.690000e-38 171.0
31 TraesCS2A01G278100 chr1A 87.857 140 11 5 2142 2280 498452785 498452651 5.820000e-35 159.0
32 TraesCS2A01G278100 chr4A 89.888 89 9 0 5516 5604 171224645 171224733 1.280000e-21 115.0
33 TraesCS2A01G278100 chr7B 89.773 88 9 0 5524 5611 479834862 479834775 4.590000e-21 113.0
34 TraesCS2A01G278100 chr7B 81.890 127 19 3 3295 3420 3851050 3850927 2.770000e-18 104.0
35 TraesCS2A01G278100 chr7B 92.308 65 5 0 5460 5524 103886052 103885988 5.990000e-15 93.5
36 TraesCS2A01G278100 chr6D 91.463 82 7 0 5524 5605 153883748 153883829 4.590000e-21 113.0
37 TraesCS2A01G278100 chr4B 91.463 82 7 0 5524 5605 75292494 75292575 4.590000e-21 113.0
38 TraesCS2A01G278100 chr4B 91.463 82 7 0 5524 5605 431115400 431115481 4.590000e-21 113.0
39 TraesCS2A01G278100 chr4B 75.877 228 31 12 5323 5527 468644947 468644721 1.660000e-15 95.3
40 TraesCS2A01G278100 chr4B 78.431 153 19 11 5381 5524 40146666 40146813 2.780000e-13 87.9
41 TraesCS2A01G278100 chr3D 94.118 68 4 0 5460 5527 84922873 84922806 2.770000e-18 104.0
42 TraesCS2A01G278100 chr1B 83.696 92 8 6 5434 5519 520239916 520239826 4.660000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G278100 chr2A 461028363 461033973 5610 False 4983.500000 9420 100.000000 1 5611 2 chr2A.!!$F2 5610
1 TraesCS2A01G278100 chr2D 347453781 347458860 5079 False 2515.333333 3149 94.204667 1 5101 3 chr2D.!!$F2 5100
2 TraesCS2A01G278100 chr2B 412743422 412748496 5074 False 1828.500000 2405 93.447750 1 5101 4 chr2B.!!$F1 5100

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 179 0.521291 CCGTGAATGGCGTGAAACAT 59.479 50.0 0.0 0.0 35.74 2.71 F
388 390 0.760572 GGTTTGCCGCCCCTATACTA 59.239 55.0 0.0 0.0 0.00 1.82 F
2154 2184 0.969894 CCATCATACTCCCTCCGTCC 59.030 60.0 0.0 0.0 0.00 4.79 F
2248 2278 1.110518 TGGGACAAGTTTTTCCGGGC 61.111 55.0 0.0 0.0 31.92 6.13 F
3492 3535 0.803380 GCTTGCCGATTGCCATTCAC 60.803 55.0 0.0 0.0 40.16 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1691 1720 0.388907 CTGCAAAATTGGCCACCTCG 60.389 55.000 3.88 0.0 0.00 4.63 R
2247 2277 0.750850 TTACTGCATACTCCCTCCGC 59.249 55.000 0.00 0.0 0.00 5.54 R
3480 3523 1.106285 GTCCTGGGTGAATGGCAATC 58.894 55.000 0.00 0.0 0.00 2.67 R
3881 4021 3.503748 GCACTAAGCCTTTCATCACAAGT 59.496 43.478 0.00 0.0 37.23 3.16 R
5428 5584 0.181824 GCGATTAAGGGGCAAGGGTA 59.818 55.000 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 6.996879 ACTCATCTAGTTAGATTGCCTACGTA 59.003 38.462 0.00 0.00 40.91 3.57
130 131 1.278238 GTCTCCGCACACTAAATCCG 58.722 55.000 0.00 0.00 0.00 4.18
173 174 2.358125 CACCCGTGAATGGCGTGA 60.358 61.111 4.91 0.00 34.19 4.35
178 179 0.521291 CCGTGAATGGCGTGAAACAT 59.479 50.000 0.00 0.00 35.74 2.71
179 180 1.735018 CCGTGAATGGCGTGAAACATA 59.265 47.619 0.00 0.00 35.74 2.29
180 181 2.475519 CCGTGAATGGCGTGAAACATAC 60.476 50.000 0.00 0.00 35.74 2.39
181 182 2.415168 CGTGAATGGCGTGAAACATACT 59.585 45.455 0.00 0.00 35.74 2.12
182 183 3.724716 CGTGAATGGCGTGAAACATACTG 60.725 47.826 0.00 0.00 35.74 2.74
219 220 9.265901 CCAAGTAGAAACGAATCATATTCTCAT 57.734 33.333 0.00 0.00 34.24 2.90
233 234 3.921119 TTCTCATGATTTGTGTGTGCC 57.079 42.857 0.00 0.00 0.00 5.01
296 298 2.696506 GGTGGTACAACTAAGCAGTCC 58.303 52.381 0.00 0.00 46.61 3.85
297 299 2.302157 GGTGGTACAACTAAGCAGTCCT 59.698 50.000 0.00 0.00 46.61 3.85
298 300 3.326747 GTGGTACAACTAAGCAGTCCTG 58.673 50.000 0.00 0.00 44.16 3.86
337 339 7.606839 AGCAAATTAGTGGAGTACCTTTACTTC 59.393 37.037 0.00 0.00 38.77 3.01
388 390 0.760572 GGTTTGCCGCCCCTATACTA 59.239 55.000 0.00 0.00 0.00 1.82
450 452 5.659440 AAGTTTGACACAAGACATTTGGT 57.341 34.783 0.00 0.00 0.00 3.67
590 593 8.326680 ACGAGTTTCTCTTCTAGGCTATATAC 57.673 38.462 0.00 0.00 0.00 1.47
648 669 7.914537 ACTTTTCTGAAATAGCGAAAAACTG 57.085 32.000 3.31 0.00 36.54 3.16
668 692 2.612212 TGAAACAACTTCTTGAGGACGC 59.388 45.455 0.00 0.00 34.86 5.19
761 787 4.520492 CAGCCCACAGTTTCTGATTACTTT 59.480 41.667 3.70 0.00 35.18 2.66
872 899 8.256356 TCCTGAAAATCCCAATTAAAAGAACA 57.744 30.769 0.00 0.00 0.00 3.18
898 925 7.093858 ACAAGGTCCTAGTGTTCTAGTGAATAC 60.094 40.741 0.00 0.00 42.30 1.89
1157 1184 8.129001 TGCCTCCCTCCTATATCTATTTCAATA 58.871 37.037 0.00 0.00 0.00 1.90
1186 1213 7.624360 TTTCTCGCATACAAGGTGATTTAAT 57.376 32.000 0.00 0.00 0.00 1.40
1382 1411 2.175878 ACAGCAAAGGCACTCAGTAG 57.824 50.000 0.00 0.00 44.61 2.57
1497 1526 7.171337 GTGTAGTTTGGTAGTTTTTACATCGGA 59.829 37.037 0.00 0.00 0.00 4.55
1540 1569 4.216411 AGTGTCCGTGCTTATACCATTT 57.784 40.909 0.00 0.00 0.00 2.32
1588 1617 6.269077 TCCTCACAATACTAGAACACAGGAAA 59.731 38.462 0.00 0.00 0.00 3.13
1691 1720 1.538047 TTCTTGCAGTGATTCTGGGC 58.462 50.000 0.00 0.00 43.78 5.36
1801 1830 2.128771 TGCCATCCTTTCTAAGCCAC 57.871 50.000 0.00 0.00 0.00 5.01
1807 1836 4.098501 CCATCCTTTCTAAGCCACAATTCC 59.901 45.833 0.00 0.00 0.00 3.01
1938 1967 4.681025 GTGCATTATGTGTTGTTGGTTCAG 59.319 41.667 0.00 0.00 0.00 3.02
1972 2001 1.027357 CATGCCCCGATGGAAAGAAG 58.973 55.000 0.00 0.00 35.39 2.85
2053 2082 8.267894 TCAAGTCCTTAAATAATTCTAGCTGCT 58.732 33.333 7.57 7.57 0.00 4.24
2074 2104 7.214467 TGCTATTTGTCTTAGTTTCCCTTTG 57.786 36.000 0.00 0.00 0.00 2.77
2085 2115 8.576442 TCTTAGTTTCCCTTTGAATGAATGTTC 58.424 33.333 0.00 0.00 31.67 3.18
2144 2174 9.014297 GCTTTATAGCCAATTTACCATCATACT 57.986 33.333 0.00 0.00 41.74 2.12
2146 2176 9.515226 TTTATAGCCAATTTACCATCATACTCC 57.485 33.333 0.00 0.00 0.00 3.85
2147 2177 4.729868 AGCCAATTTACCATCATACTCCC 58.270 43.478 0.00 0.00 0.00 4.30
2149 2179 4.762251 GCCAATTTACCATCATACTCCCTC 59.238 45.833 0.00 0.00 0.00 4.30
2150 2180 5.316987 CCAATTTACCATCATACTCCCTCC 58.683 45.833 0.00 0.00 0.00 4.30
2152 2182 3.323774 TTACCATCATACTCCCTCCGT 57.676 47.619 0.00 0.00 0.00 4.69
2153 2183 1.705873 ACCATCATACTCCCTCCGTC 58.294 55.000 0.00 0.00 0.00 4.79
2154 2184 0.969894 CCATCATACTCCCTCCGTCC 59.030 60.000 0.00 0.00 0.00 4.79
2155 2185 1.704641 CATCATACTCCCTCCGTCCA 58.295 55.000 0.00 0.00 0.00 4.02
2156 2186 2.039418 CATCATACTCCCTCCGTCCAA 58.961 52.381 0.00 0.00 0.00 3.53
2157 2187 2.241281 TCATACTCCCTCCGTCCAAA 57.759 50.000 0.00 0.00 0.00 3.28
2159 2189 2.907696 TCATACTCCCTCCGTCCAAAAA 59.092 45.455 0.00 0.00 0.00 1.94
2185 2215 9.492730 AAATTTGTCCCTTAAATGGATGTATCT 57.507 29.630 0.00 0.00 33.65 1.98
2187 2217 9.799106 ATTTGTCCCTTAAATGGATGTATCTAG 57.201 33.333 0.00 0.00 33.65 2.43
2188 2218 6.769512 TGTCCCTTAAATGGATGTATCTAGC 58.230 40.000 0.00 0.00 33.65 3.42
2189 2219 6.328934 TGTCCCTTAAATGGATGTATCTAGCA 59.671 38.462 0.00 0.00 33.65 3.49
2190 2220 6.651225 GTCCCTTAAATGGATGTATCTAGCAC 59.349 42.308 0.00 0.00 33.65 4.40
2191 2221 5.940470 CCCTTAAATGGATGTATCTAGCACC 59.060 44.000 0.00 0.00 0.00 5.01
2192 2222 6.465751 CCCTTAAATGGATGTATCTAGCACCA 60.466 42.308 0.00 0.00 0.00 4.17
2193 2223 6.998074 CCTTAAATGGATGTATCTAGCACCAA 59.002 38.462 0.00 0.00 0.00 3.67
2194 2224 7.173907 CCTTAAATGGATGTATCTAGCACCAAG 59.826 40.741 0.00 0.00 0.00 3.61
2195 2225 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
2196 2226 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
2197 2227 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
2198 2228 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
2199 2229 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
2200 2230 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
2212 2242 6.810911 CACCAAGTTAGTGCTAGATACATCT 58.189 40.000 0.00 0.00 40.86 2.90
2213 2243 7.941919 CACCAAGTTAGTGCTAGATACATCTA 58.058 38.462 0.00 0.00 38.32 1.98
2214 2244 8.580720 CACCAAGTTAGTGCTAGATACATCTAT 58.419 37.037 0.00 0.00 38.60 1.98
2215 2245 9.148879 ACCAAGTTAGTGCTAGATACATCTATT 57.851 33.333 0.00 0.00 38.60 1.73
2216 2246 9.988815 CCAAGTTAGTGCTAGATACATCTATTT 57.011 33.333 0.00 0.00 38.60 1.40
2232 2262 5.920193 TCTATTTGATGGAAAAGCTTGGG 57.080 39.130 0.00 0.00 0.00 4.12
2233 2263 5.579047 TCTATTTGATGGAAAAGCTTGGGA 58.421 37.500 0.00 0.00 0.00 4.37
2234 2264 4.541973 ATTTGATGGAAAAGCTTGGGAC 57.458 40.909 0.00 0.00 0.00 4.46
2235 2265 2.673775 TGATGGAAAAGCTTGGGACA 57.326 45.000 0.00 0.00 0.00 4.02
2247 2277 3.119225 TGGGACAAGTTTTTCCGGG 57.881 52.632 0.00 0.00 31.92 5.73
2248 2278 1.110518 TGGGACAAGTTTTTCCGGGC 61.111 55.000 0.00 0.00 31.92 6.13
2249 2279 1.284715 GGACAAGTTTTTCCGGGCG 59.715 57.895 0.00 0.00 0.00 6.13
2250 2280 1.284715 GACAAGTTTTTCCGGGCGG 59.715 57.895 0.00 0.00 0.00 6.13
2251 2281 1.152922 ACAAGTTTTTCCGGGCGGA 60.153 52.632 0.00 0.00 43.52 5.54
2252 2282 1.170290 ACAAGTTTTTCCGGGCGGAG 61.170 55.000 0.00 0.00 46.06 4.63
2253 2283 1.602605 AAGTTTTTCCGGGCGGAGG 60.603 57.895 0.00 0.00 46.06 4.30
2254 2284 3.060000 GTTTTTCCGGGCGGAGGG 61.060 66.667 0.00 0.00 46.06 4.30
2255 2285 3.250734 TTTTTCCGGGCGGAGGGA 61.251 61.111 0.00 0.00 46.06 4.20
2256 2286 3.262448 TTTTTCCGGGCGGAGGGAG 62.262 63.158 0.00 0.00 46.06 4.30
2323 2353 9.816787 TTAGTTTCATATTTTTCCCAAGTAGGT 57.183 29.630 0.00 0.00 34.66 3.08
2441 2471 6.211587 TCATTCTTTTAATGGATGGCAGTG 57.788 37.500 0.00 0.00 0.00 3.66
2485 2515 9.461312 AGAAACAAAATGCTACATACAGGAATA 57.539 29.630 0.00 0.00 0.00 1.75
2523 2554 8.751302 AACAGTTTCAATTCGTTACTTGTTTT 57.249 26.923 0.00 0.00 0.00 2.43
2688 2729 3.735746 GCAACAGTCTTTATGTTTGTGGC 59.264 43.478 0.00 0.00 38.80 5.01
2782 2823 1.740025 GTGCTGGCAGGTTTCATAGTC 59.260 52.381 17.64 0.00 0.00 2.59
2851 2892 2.037902 TGTTCACCATACCGAGCAAAGA 59.962 45.455 0.00 0.00 0.00 2.52
2884 2925 5.276631 CGCGTATGTTGCAATATGTTCACTA 60.277 40.000 17.97 0.00 0.00 2.74
2887 2928 7.643764 GCGTATGTTGCAATATGTTCACTATTT 59.356 33.333 17.97 0.00 0.00 1.40
2933 2974 3.550437 ACATCATACCAGGACTTGAGC 57.450 47.619 0.00 0.00 0.00 4.26
3060 3101 6.322456 TGAACCAATTTGTCTACATCCAAACA 59.678 34.615 0.00 0.00 33.73 2.83
3171 3212 8.929746 CAACTGAAGTATACTGCCATACATATG 58.070 37.037 6.06 0.00 34.42 1.78
3186 3227 8.298854 GCCATACATATGAATTGCATTACTTCA 58.701 33.333 10.38 0.00 38.44 3.02
3212 3253 4.761975 CCTAACCTACAGTATTCCGCAAA 58.238 43.478 0.00 0.00 0.00 3.68
3294 3335 4.481112 GCAAGCGGGCATTCCACG 62.481 66.667 0.00 0.00 34.36 4.94
3334 3375 8.424918 AGTATATCAAAAGTCAGTCCTATGTGG 58.575 37.037 0.00 0.00 37.10 4.17
3358 3399 9.793259 TGGATCTAAAATAAAAGCTATACTGGG 57.207 33.333 0.00 0.00 0.00 4.45
3420 3463 2.756760 CTGCTTGCATCCCAAACTACAT 59.243 45.455 0.00 0.00 31.94 2.29
3480 3523 2.030363 TGTTAACAAAGGATGCTTGCCG 60.030 45.455 5.64 0.00 0.00 5.69
3492 3535 0.803380 GCTTGCCGATTGCCATTCAC 60.803 55.000 0.00 0.00 40.16 3.18
3525 3568 8.909671 CATTTTCTGAGAAGTAAAGTTTGATGC 58.090 33.333 0.00 0.00 0.00 3.91
3572 3615 7.695618 GTCTACAATCTCAGACATCAATTTTGC 59.304 37.037 0.00 0.00 40.74 3.68
3636 3682 5.317733 ACTCTACTGATGAGTGTACAAGC 57.682 43.478 0.00 0.00 42.46 4.01
3639 3685 3.045601 ACTGATGAGTGTACAAGCACC 57.954 47.619 0.00 0.00 40.04 5.01
3735 3792 3.941483 GGTGTGCACAATATACTGCTCTT 59.059 43.478 23.59 0.00 34.29 2.85
3772 3829 2.231235 TCTCATTGCAGACGTCTAAGCA 59.769 45.455 22.55 22.55 34.79 3.91
3992 4133 1.005294 TCTTTCGAGCACGGCGTTAC 61.005 55.000 11.19 5.61 40.21 2.50
3993 4134 1.279527 CTTTCGAGCACGGCGTTACA 61.280 55.000 11.19 0.00 40.21 2.41
4067 4208 0.735978 TCAATACAGCTGTGGTCGCG 60.736 55.000 29.57 11.30 0.00 5.87
4093 4234 7.391554 GCCTGTATATTATGTGATGTTCACCAT 59.608 37.037 5.27 2.59 46.40 3.55
4173 4314 9.630098 CTTTTGTAGTTTCATGAATGCAATAGT 57.370 29.630 9.40 0.00 0.00 2.12
4197 4338 7.495279 AGTTTTTAGCAGTTTCATGAATGCAAA 59.505 29.630 27.36 22.00 41.14 3.68
4295 4436 9.512435 AATGTGTTCACTACGATACTACATAAC 57.488 33.333 4.59 0.00 0.00 1.89
4344 4485 8.012957 ACTAGTGATATTGACTCGAAATTCCT 57.987 34.615 0.00 0.00 0.00 3.36
4347 4488 7.978982 AGTGATATTGACTCGAAATTCCTTTG 58.021 34.615 0.00 0.00 0.00 2.77
4391 4532 8.488651 AAGGACTTGAATAAATTGGTACGTAG 57.511 34.615 0.00 0.00 0.00 3.51
4412 4553 6.637254 CGTAGTATTGACTTATGAATGCGACT 59.363 38.462 0.00 0.00 37.10 4.18
4413 4554 7.801783 CGTAGTATTGACTTATGAATGCGACTA 59.198 37.037 0.00 0.00 37.10 2.59
4432 4574 5.333645 CGACTAGATAGCATTTGATGGTTGC 60.334 44.000 0.00 0.00 41.83 4.17
4444 4586 7.857885 GCATTTGATGGTTGCTACTTTACTATC 59.142 37.037 0.00 0.00 33.61 2.08
4499 4641 1.762708 CAAGTGAGGTGTGTGGGTTT 58.237 50.000 0.00 0.00 0.00 3.27
4664 4806 6.482835 TCAAAACACATACTCTTGTTGAACG 58.517 36.000 0.00 0.00 36.08 3.95
4748 4890 6.179756 TCAATTGCAGCTTCACTTATAGGAA 58.820 36.000 0.00 0.00 0.00 3.36
4903 5045 8.607713 TCAGTTTAGGGAAACACTTATATTCCA 58.392 33.333 6.16 0.00 46.30 3.53
4916 5058 9.733556 ACACTTATATTCCATTGTAGTTGTGAA 57.266 29.630 0.00 0.00 0.00 3.18
4969 5111 4.330620 TCGCTAAATTCGGGATGTTAACAC 59.669 41.667 11.22 5.10 0.00 3.32
4994 5136 5.448632 CGGGGTAGTAATTCTGATGCAAAAC 60.449 44.000 0.00 0.00 0.00 2.43
5018 5160 6.156256 ACATACTTATGGAACTACAGAGGCAA 59.844 38.462 1.43 0.00 38.00 4.52
5019 5161 5.091261 ACTTATGGAACTACAGAGGCAAG 57.909 43.478 0.00 0.00 0.00 4.01
5020 5162 4.080863 ACTTATGGAACTACAGAGGCAAGG 60.081 45.833 0.00 0.00 0.00 3.61
5021 5163 0.324943 TGGAACTACAGAGGCAAGGC 59.675 55.000 0.00 0.00 0.00 4.35
5022 5164 0.324943 GGAACTACAGAGGCAAGGCA 59.675 55.000 0.00 0.00 0.00 4.75
5050 5192 6.589907 AGTTAAGTGGAGTTTTTGCTTGTTTG 59.410 34.615 0.00 0.00 0.00 2.93
5056 5199 3.205338 AGTTTTTGCTTGTTTGGATGCC 58.795 40.909 0.00 0.00 0.00 4.40
5062 5205 1.673626 GCTTGTTTGGATGCCACCATG 60.674 52.381 0.00 0.00 39.82 3.66
5336 5492 3.512496 TGCTTATATACATCCGACCCCA 58.488 45.455 0.00 0.00 0.00 4.96
5337 5493 4.101114 TGCTTATATACATCCGACCCCAT 58.899 43.478 0.00 0.00 0.00 4.00
5338 5494 4.534500 TGCTTATATACATCCGACCCCATT 59.466 41.667 0.00 0.00 0.00 3.16
5339 5495 5.013704 TGCTTATATACATCCGACCCCATTT 59.986 40.000 0.00 0.00 0.00 2.32
5340 5496 5.944007 GCTTATATACATCCGACCCCATTTT 59.056 40.000 0.00 0.00 0.00 1.82
5341 5497 6.433093 GCTTATATACATCCGACCCCATTTTT 59.567 38.462 0.00 0.00 0.00 1.94
5365 5521 8.455598 TTTTTAAGTCCGCACATTAAAATAGC 57.544 30.769 7.15 0.00 37.88 2.97
5366 5522 4.632538 AAGTCCGCACATTAAAATAGCC 57.367 40.909 0.00 0.00 0.00 3.93
5367 5523 2.612212 AGTCCGCACATTAAAATAGCCG 59.388 45.455 0.00 0.00 0.00 5.52
5368 5524 1.332375 TCCGCACATTAAAATAGCCGC 59.668 47.619 0.00 0.00 0.00 6.53
5369 5525 1.064803 CCGCACATTAAAATAGCCGCA 59.935 47.619 0.00 0.00 0.00 5.69
5370 5526 2.287547 CCGCACATTAAAATAGCCGCAT 60.288 45.455 0.00 0.00 0.00 4.73
5371 5527 3.058570 CCGCACATTAAAATAGCCGCATA 60.059 43.478 0.00 0.00 0.00 3.14
5372 5528 4.379394 CCGCACATTAAAATAGCCGCATAT 60.379 41.667 0.00 0.00 0.00 1.78
5373 5529 5.163804 CCGCACATTAAAATAGCCGCATATA 60.164 40.000 0.00 0.00 0.00 0.86
5374 5530 6.458206 CCGCACATTAAAATAGCCGCATATAT 60.458 38.462 0.00 0.00 0.00 0.86
5375 5531 7.254624 CCGCACATTAAAATAGCCGCATATATA 60.255 37.037 0.00 0.00 0.00 0.86
5376 5532 7.793888 CGCACATTAAAATAGCCGCATATATAG 59.206 37.037 0.00 0.00 0.00 1.31
5377 5533 8.612619 GCACATTAAAATAGCCGCATATATAGT 58.387 33.333 0.00 0.00 0.00 2.12
5407 5563 9.726438 AAATAGTTCAAATGCAGTAGTAGTTCT 57.274 29.630 0.00 0.00 0.00 3.01
5408 5564 8.934507 ATAGTTCAAATGCAGTAGTAGTTCTC 57.065 34.615 0.00 0.00 0.00 2.87
5409 5565 6.759272 AGTTCAAATGCAGTAGTAGTTCTCA 58.241 36.000 0.00 0.00 0.00 3.27
5410 5566 7.390027 AGTTCAAATGCAGTAGTAGTTCTCAT 58.610 34.615 0.00 0.00 0.00 2.90
5411 5567 7.880195 AGTTCAAATGCAGTAGTAGTTCTCATT 59.120 33.333 0.00 0.00 0.00 2.57
5412 5568 9.151471 GTTCAAATGCAGTAGTAGTTCTCATTA 57.849 33.333 0.00 0.00 0.00 1.90
5413 5569 8.932945 TCAAATGCAGTAGTAGTTCTCATTAG 57.067 34.615 0.00 0.00 0.00 1.73
5414 5570 8.749354 TCAAATGCAGTAGTAGTTCTCATTAGA 58.251 33.333 0.00 0.00 0.00 2.10
5415 5571 9.371136 CAAATGCAGTAGTAGTTCTCATTAGAA 57.629 33.333 0.00 0.00 39.47 2.10
5416 5572 9.944376 AAATGCAGTAGTAGTTCTCATTAGAAA 57.056 29.630 0.00 0.00 43.30 2.52
5417 5573 9.944376 AATGCAGTAGTAGTTCTCATTAGAAAA 57.056 29.630 0.00 0.00 43.30 2.29
5418 5574 8.988064 TGCAGTAGTAGTTCTCATTAGAAAAG 57.012 34.615 0.00 0.00 43.30 2.27
5419 5575 8.585881 TGCAGTAGTAGTTCTCATTAGAAAAGT 58.414 33.333 0.00 0.00 43.30 2.66
5420 5576 9.425577 GCAGTAGTAGTTCTCATTAGAAAAGTT 57.574 33.333 0.00 0.00 43.30 2.66
5437 5593 7.611770 AGAAAAGTTCAAATATTACCCTTGCC 58.388 34.615 0.00 0.00 0.00 4.52
5438 5594 5.932619 AAGTTCAAATATTACCCTTGCCC 57.067 39.130 0.00 0.00 0.00 5.36
5439 5595 4.286707 AGTTCAAATATTACCCTTGCCCC 58.713 43.478 0.00 0.00 0.00 5.80
5440 5596 4.016572 AGTTCAAATATTACCCTTGCCCCT 60.017 41.667 0.00 0.00 0.00 4.79
5441 5597 4.618378 TCAAATATTACCCTTGCCCCTT 57.382 40.909 0.00 0.00 0.00 3.95
5442 5598 5.735733 TCAAATATTACCCTTGCCCCTTA 57.264 39.130 0.00 0.00 0.00 2.69
5443 5599 6.093617 TCAAATATTACCCTTGCCCCTTAA 57.906 37.500 0.00 0.00 0.00 1.85
5444 5600 6.688554 TCAAATATTACCCTTGCCCCTTAAT 58.311 36.000 0.00 0.00 0.00 1.40
5445 5601 6.780522 TCAAATATTACCCTTGCCCCTTAATC 59.219 38.462 0.00 0.00 0.00 1.75
5446 5602 2.721425 TTACCCTTGCCCCTTAATCG 57.279 50.000 0.00 0.00 0.00 3.34
5447 5603 0.181824 TACCCTTGCCCCTTAATCGC 59.818 55.000 0.00 0.00 0.00 4.58
5448 5604 1.828224 CCCTTGCCCCTTAATCGCC 60.828 63.158 0.00 0.00 0.00 5.54
5449 5605 1.077068 CCTTGCCCCTTAATCGCCA 60.077 57.895 0.00 0.00 0.00 5.69
5450 5606 0.682855 CCTTGCCCCTTAATCGCCAA 60.683 55.000 0.00 0.00 0.00 4.52
5451 5607 1.402787 CTTGCCCCTTAATCGCCAAT 58.597 50.000 0.00 0.00 0.00 3.16
5452 5608 2.582052 CTTGCCCCTTAATCGCCAATA 58.418 47.619 0.00 0.00 0.00 1.90
5453 5609 2.270352 TGCCCCTTAATCGCCAATAG 57.730 50.000 0.00 0.00 0.00 1.73
5454 5610 1.771854 TGCCCCTTAATCGCCAATAGA 59.228 47.619 0.00 0.00 0.00 1.98
5455 5611 2.375174 TGCCCCTTAATCGCCAATAGAT 59.625 45.455 0.00 0.00 0.00 1.98
5456 5612 2.749621 GCCCCTTAATCGCCAATAGATG 59.250 50.000 0.00 0.00 0.00 2.90
5457 5613 2.749621 CCCCTTAATCGCCAATAGATGC 59.250 50.000 0.00 0.00 0.00 3.91
5458 5614 3.560025 CCCCTTAATCGCCAATAGATGCT 60.560 47.826 0.00 0.00 0.00 3.79
5459 5615 4.074970 CCCTTAATCGCCAATAGATGCTT 58.925 43.478 0.00 0.00 0.00 3.91
5460 5616 4.154918 CCCTTAATCGCCAATAGATGCTTC 59.845 45.833 0.00 0.00 0.00 3.86
5461 5617 4.756642 CCTTAATCGCCAATAGATGCTTCA 59.243 41.667 2.07 0.00 0.00 3.02
5462 5618 5.106791 CCTTAATCGCCAATAGATGCTTCAG 60.107 44.000 2.07 0.00 0.00 3.02
5463 5619 3.758755 ATCGCCAATAGATGCTTCAGA 57.241 42.857 2.07 0.00 0.00 3.27
5464 5620 3.758755 TCGCCAATAGATGCTTCAGAT 57.241 42.857 2.07 0.00 0.00 2.90
5465 5621 3.657634 TCGCCAATAGATGCTTCAGATC 58.342 45.455 2.07 0.00 0.00 2.75
5466 5622 3.323115 TCGCCAATAGATGCTTCAGATCT 59.677 43.478 2.07 0.00 34.47 2.75
5467 5623 4.063689 CGCCAATAGATGCTTCAGATCTT 58.936 43.478 0.00 0.00 32.32 2.40
5468 5624 4.152045 CGCCAATAGATGCTTCAGATCTTC 59.848 45.833 0.00 0.00 32.32 2.87
5469 5625 4.455190 GCCAATAGATGCTTCAGATCTTCC 59.545 45.833 0.00 0.00 32.32 3.46
5470 5626 5.745476 GCCAATAGATGCTTCAGATCTTCCT 60.745 44.000 0.00 0.00 32.32 3.36
5471 5627 6.297582 CCAATAGATGCTTCAGATCTTCCTT 58.702 40.000 0.00 0.00 32.32 3.36
5472 5628 6.427547 CCAATAGATGCTTCAGATCTTCCTTC 59.572 42.308 0.00 0.00 32.32 3.46
5473 5629 6.744175 ATAGATGCTTCAGATCTTCCTTCA 57.256 37.500 0.00 0.00 32.32 3.02
5474 5630 5.026038 AGATGCTTCAGATCTTCCTTCAG 57.974 43.478 0.00 0.00 0.00 3.02
5475 5631 4.470664 AGATGCTTCAGATCTTCCTTCAGT 59.529 41.667 0.00 0.00 0.00 3.41
5476 5632 4.630644 TGCTTCAGATCTTCCTTCAGTT 57.369 40.909 0.00 0.00 0.00 3.16
5477 5633 5.745312 TGCTTCAGATCTTCCTTCAGTTA 57.255 39.130 0.00 0.00 0.00 2.24
5478 5634 5.482908 TGCTTCAGATCTTCCTTCAGTTAC 58.517 41.667 0.00 0.00 0.00 2.50
5479 5635 5.247110 TGCTTCAGATCTTCCTTCAGTTACT 59.753 40.000 0.00 0.00 0.00 2.24
5480 5636 6.169800 GCTTCAGATCTTCCTTCAGTTACTT 58.830 40.000 0.00 0.00 0.00 2.24
5481 5637 6.091986 GCTTCAGATCTTCCTTCAGTTACTTG 59.908 42.308 0.00 0.00 0.00 3.16
5482 5638 6.672266 TCAGATCTTCCTTCAGTTACTTGT 57.328 37.500 0.00 0.00 0.00 3.16
5483 5639 6.459066 TCAGATCTTCCTTCAGTTACTTGTG 58.541 40.000 0.00 0.00 0.00 3.33
5484 5640 6.267699 TCAGATCTTCCTTCAGTTACTTGTGA 59.732 38.462 0.00 0.00 0.00 3.58
5485 5641 6.589523 CAGATCTTCCTTCAGTTACTTGTGAG 59.410 42.308 0.00 0.00 0.00 3.51
5486 5642 5.871396 TCTTCCTTCAGTTACTTGTGAGT 57.129 39.130 0.00 0.00 39.97 3.41
5487 5643 6.235231 TCTTCCTTCAGTTACTTGTGAGTT 57.765 37.500 0.00 0.00 37.33 3.01
5488 5644 6.049149 TCTTCCTTCAGTTACTTGTGAGTTG 58.951 40.000 0.00 0.00 37.33 3.16
5489 5645 5.353394 TCCTTCAGTTACTTGTGAGTTGT 57.647 39.130 0.00 0.00 37.33 3.32
5490 5646 5.741011 TCCTTCAGTTACTTGTGAGTTGTT 58.259 37.500 0.00 0.00 37.33 2.83
5491 5647 5.815740 TCCTTCAGTTACTTGTGAGTTGTTC 59.184 40.000 0.00 0.00 37.33 3.18
5492 5648 5.276868 CCTTCAGTTACTTGTGAGTTGTTCG 60.277 44.000 0.00 0.00 37.33 3.95
5493 5649 5.001237 TCAGTTACTTGTGAGTTGTTCGA 57.999 39.130 0.00 0.00 37.33 3.71
5494 5650 5.597806 TCAGTTACTTGTGAGTTGTTCGAT 58.402 37.500 0.00 0.00 37.33 3.59
5495 5651 5.462068 TCAGTTACTTGTGAGTTGTTCGATG 59.538 40.000 0.00 0.00 37.33 3.84
5496 5652 4.211374 AGTTACTTGTGAGTTGTTCGATGC 59.789 41.667 0.00 0.00 37.33 3.91
5497 5653 2.838736 ACTTGTGAGTTGTTCGATGCT 58.161 42.857 0.00 0.00 29.87 3.79
5498 5654 2.545526 ACTTGTGAGTTGTTCGATGCTG 59.454 45.455 0.00 0.00 29.87 4.41
5499 5655 2.524569 TGTGAGTTGTTCGATGCTGA 57.475 45.000 0.00 0.00 0.00 4.26
5500 5656 2.832563 TGTGAGTTGTTCGATGCTGAA 58.167 42.857 0.00 0.00 0.00 3.02
5501 5657 3.402110 TGTGAGTTGTTCGATGCTGAAT 58.598 40.909 0.00 0.00 0.00 2.57
5502 5658 3.814842 TGTGAGTTGTTCGATGCTGAATT 59.185 39.130 0.00 0.00 0.00 2.17
5503 5659 4.275689 TGTGAGTTGTTCGATGCTGAATTT 59.724 37.500 0.00 0.00 0.00 1.82
5504 5660 4.614284 GTGAGTTGTTCGATGCTGAATTTG 59.386 41.667 0.00 0.00 0.00 2.32
5505 5661 4.275689 TGAGTTGTTCGATGCTGAATTTGT 59.724 37.500 0.00 0.00 0.00 2.83
5506 5662 5.186996 AGTTGTTCGATGCTGAATTTGTT 57.813 34.783 0.00 0.00 0.00 2.83
5507 5663 4.977963 AGTTGTTCGATGCTGAATTTGTTG 59.022 37.500 0.00 0.00 0.00 3.33
5508 5664 4.827304 TGTTCGATGCTGAATTTGTTGA 57.173 36.364 0.00 0.00 0.00 3.18
5509 5665 5.375417 TGTTCGATGCTGAATTTGTTGAT 57.625 34.783 0.00 0.00 0.00 2.57
5510 5666 5.155643 TGTTCGATGCTGAATTTGTTGATG 58.844 37.500 0.00 0.00 0.00 3.07
5511 5667 3.761657 TCGATGCTGAATTTGTTGATGC 58.238 40.909 0.00 0.00 0.00 3.91
5512 5668 3.190953 TCGATGCTGAATTTGTTGATGCA 59.809 39.130 0.00 0.00 0.00 3.96
5513 5669 4.109766 CGATGCTGAATTTGTTGATGCAT 58.890 39.130 0.00 0.00 41.51 3.96
5514 5670 4.565166 CGATGCTGAATTTGTTGATGCATT 59.435 37.500 0.00 0.00 39.36 3.56
5515 5671 5.062934 CGATGCTGAATTTGTTGATGCATTT 59.937 36.000 0.00 0.00 39.36 2.32
5516 5672 5.599359 TGCTGAATTTGTTGATGCATTTG 57.401 34.783 0.00 0.00 0.00 2.32
5517 5673 5.298347 TGCTGAATTTGTTGATGCATTTGA 58.702 33.333 0.00 0.00 0.00 2.69
5518 5674 5.758784 TGCTGAATTTGTTGATGCATTTGAA 59.241 32.000 0.00 0.00 0.00 2.69
5519 5675 6.075280 GCTGAATTTGTTGATGCATTTGAAC 58.925 36.000 0.00 5.49 0.00 3.18
5520 5676 6.292973 GCTGAATTTGTTGATGCATTTGAACA 60.293 34.615 0.00 8.14 0.00 3.18
5521 5677 7.549615 TGAATTTGTTGATGCATTTGAACAA 57.450 28.000 20.23 20.23 36.71 2.83
5522 5678 7.982224 TGAATTTGTTGATGCATTTGAACAAA 58.018 26.923 28.68 28.68 46.63 2.83
5523 5679 7.909121 TGAATTTGTTGATGCATTTGAACAAAC 59.091 29.630 28.90 22.39 45.87 2.93
5524 5680 6.732531 TTTGTTGATGCATTTGAACAAACA 57.267 29.167 25.83 14.97 41.19 2.83
5525 5681 5.715429 TGTTGATGCATTTGAACAAACAC 57.285 34.783 14.19 0.00 32.51 3.32
5526 5682 5.417811 TGTTGATGCATTTGAACAAACACT 58.582 33.333 14.19 0.00 32.51 3.55
5527 5683 6.567959 TGTTGATGCATTTGAACAAACACTA 58.432 32.000 14.19 0.00 32.51 2.74
5528 5684 6.696583 TGTTGATGCATTTGAACAAACACTAG 59.303 34.615 14.19 0.00 32.51 2.57
5529 5685 6.389830 TGATGCATTTGAACAAACACTAGT 57.610 33.333 0.00 0.00 32.51 2.57
5530 5686 7.503521 TGATGCATTTGAACAAACACTAGTA 57.496 32.000 0.00 0.00 32.51 1.82
5531 5687 7.359595 TGATGCATTTGAACAAACACTAGTAC 58.640 34.615 0.00 0.00 32.51 2.73
5532 5688 5.743467 TGCATTTGAACAAACACTAGTACG 58.257 37.500 0.00 0.00 32.51 3.67
5533 5689 4.611366 GCATTTGAACAAACACTAGTACGC 59.389 41.667 0.00 0.00 32.51 4.42
5534 5690 5.743467 CATTTGAACAAACACTAGTACGCA 58.257 37.500 0.00 0.00 32.51 5.24
5535 5691 5.994887 TTTGAACAAACACTAGTACGCAT 57.005 34.783 0.00 0.00 0.00 4.73
5536 5692 5.994887 TTGAACAAACACTAGTACGCATT 57.005 34.783 0.00 0.00 0.00 3.56
5537 5693 5.337219 TGAACAAACACTAGTACGCATTG 57.663 39.130 0.00 0.00 0.00 2.82
5538 5694 4.212425 TGAACAAACACTAGTACGCATTGG 59.788 41.667 0.00 0.00 0.00 3.16
5539 5695 3.735591 ACAAACACTAGTACGCATTGGT 58.264 40.909 0.00 0.00 0.00 3.67
5540 5696 3.744426 ACAAACACTAGTACGCATTGGTC 59.256 43.478 0.00 0.00 0.00 4.02
5541 5697 2.667473 ACACTAGTACGCATTGGTCC 57.333 50.000 0.00 0.00 0.00 4.46
5542 5698 2.176889 ACACTAGTACGCATTGGTCCT 58.823 47.619 0.00 0.00 0.00 3.85
5543 5699 3.359033 ACACTAGTACGCATTGGTCCTA 58.641 45.455 0.00 0.00 0.00 2.94
5544 5700 3.958798 ACACTAGTACGCATTGGTCCTAT 59.041 43.478 0.00 0.00 0.00 2.57
5545 5701 4.202121 ACACTAGTACGCATTGGTCCTATG 60.202 45.833 8.78 8.78 0.00 2.23
5546 5702 2.240493 AGTACGCATTGGTCCTATGC 57.760 50.000 23.66 23.66 43.80 3.14
5547 5703 1.484653 AGTACGCATTGGTCCTATGCA 59.515 47.619 29.69 14.52 46.77 3.96
5548 5704 2.093181 AGTACGCATTGGTCCTATGCAA 60.093 45.455 29.69 18.41 46.77 4.08
5549 5705 1.832883 ACGCATTGGTCCTATGCAAA 58.167 45.000 29.69 0.00 46.77 3.68
5550 5706 1.472480 ACGCATTGGTCCTATGCAAAC 59.528 47.619 29.69 8.35 46.77 2.93
5551 5707 1.531677 CGCATTGGTCCTATGCAAACG 60.532 52.381 29.69 15.01 46.77 3.60
5552 5708 1.742831 GCATTGGTCCTATGCAAACGA 59.257 47.619 27.12 0.00 45.93 3.85
5553 5709 2.358898 GCATTGGTCCTATGCAAACGAT 59.641 45.455 27.12 0.00 45.93 3.73
5554 5710 3.181487 GCATTGGTCCTATGCAAACGATT 60.181 43.478 27.12 0.00 45.93 3.34
5555 5711 4.677779 GCATTGGTCCTATGCAAACGATTT 60.678 41.667 27.12 0.00 45.93 2.17
5556 5712 5.410067 CATTGGTCCTATGCAAACGATTTT 58.590 37.500 0.08 0.00 0.00 1.82
5557 5713 5.461032 TTGGTCCTATGCAAACGATTTTT 57.539 34.783 0.00 0.00 0.00 1.94
5558 5714 6.576662 TTGGTCCTATGCAAACGATTTTTA 57.423 33.333 0.00 0.00 0.00 1.52
5559 5715 6.576662 TGGTCCTATGCAAACGATTTTTAA 57.423 33.333 0.00 0.00 0.00 1.52
5560 5716 6.383415 TGGTCCTATGCAAACGATTTTTAAC 58.617 36.000 0.00 0.00 0.00 2.01
5561 5717 5.803461 GGTCCTATGCAAACGATTTTTAACC 59.197 40.000 0.00 0.00 0.00 2.85
5562 5718 5.803461 GTCCTATGCAAACGATTTTTAACCC 59.197 40.000 0.00 0.00 0.00 4.11
5563 5719 5.105675 TCCTATGCAAACGATTTTTAACCCC 60.106 40.000 0.00 0.00 0.00 4.95
5564 5720 4.882842 ATGCAAACGATTTTTAACCCCT 57.117 36.364 0.00 0.00 0.00 4.79
5565 5721 4.674281 TGCAAACGATTTTTAACCCCTT 57.326 36.364 0.00 0.00 0.00 3.95
5566 5722 5.024785 TGCAAACGATTTTTAACCCCTTT 57.975 34.783 0.00 0.00 0.00 3.11
5567 5723 5.429130 TGCAAACGATTTTTAACCCCTTTT 58.571 33.333 0.00 0.00 0.00 2.27
5568 5724 5.524281 TGCAAACGATTTTTAACCCCTTTTC 59.476 36.000 0.00 0.00 0.00 2.29
5569 5725 5.332732 GCAAACGATTTTTAACCCCTTTTCG 60.333 40.000 0.00 0.00 0.00 3.46
5570 5726 3.904571 ACGATTTTTAACCCCTTTTCGC 58.095 40.909 0.00 0.00 0.00 4.70
5571 5727 2.912345 CGATTTTTAACCCCTTTTCGCG 59.088 45.455 0.00 0.00 0.00 5.87
5572 5728 3.365164 CGATTTTTAACCCCTTTTCGCGA 60.365 43.478 3.71 3.71 0.00 5.87
5573 5729 4.673320 CGATTTTTAACCCCTTTTCGCGAT 60.673 41.667 10.88 0.00 0.00 4.58
5574 5730 3.562567 TTTTAACCCCTTTTCGCGATG 57.437 42.857 10.88 3.21 0.00 3.84
5575 5731 2.476126 TTAACCCCTTTTCGCGATGA 57.524 45.000 10.88 0.00 0.00 2.92
5576 5732 1.729284 TAACCCCTTTTCGCGATGAC 58.271 50.000 10.88 0.00 0.00 3.06
5577 5733 0.250553 AACCCCTTTTCGCGATGACA 60.251 50.000 10.88 0.00 0.00 3.58
5578 5734 0.035439 ACCCCTTTTCGCGATGACAT 60.035 50.000 10.88 0.00 0.00 3.06
5579 5735 1.094785 CCCCTTTTCGCGATGACATT 58.905 50.000 10.88 0.00 0.00 2.71
5580 5736 1.472480 CCCCTTTTCGCGATGACATTT 59.528 47.619 10.88 0.00 0.00 2.32
5581 5737 2.518949 CCCTTTTCGCGATGACATTTG 58.481 47.619 10.88 0.00 0.00 2.32
5582 5738 2.518949 CCTTTTCGCGATGACATTTGG 58.481 47.619 10.88 0.26 0.00 3.28
5583 5739 2.161410 CCTTTTCGCGATGACATTTGGA 59.839 45.455 10.88 0.00 0.00 3.53
5584 5740 3.365868 CCTTTTCGCGATGACATTTGGAA 60.366 43.478 10.88 0.00 0.00 3.53
5585 5741 2.892373 TTCGCGATGACATTTGGAAC 57.108 45.000 10.88 0.00 0.00 3.62
5586 5742 1.083489 TCGCGATGACATTTGGAACC 58.917 50.000 3.71 0.00 0.00 3.62
5587 5743 0.247655 CGCGATGACATTTGGAACCG 60.248 55.000 0.00 0.00 0.00 4.44
5588 5744 0.802494 GCGATGACATTTGGAACCGT 59.198 50.000 0.00 0.00 0.00 4.83
5589 5745 1.199097 GCGATGACATTTGGAACCGTT 59.801 47.619 0.00 0.00 0.00 4.44
5590 5746 2.850321 CGATGACATTTGGAACCGTTG 58.150 47.619 0.00 0.00 0.00 4.10
5591 5747 2.595386 GATGACATTTGGAACCGTTGC 58.405 47.619 0.00 0.00 0.00 4.17
5592 5748 0.671251 TGACATTTGGAACCGTTGCC 59.329 50.000 0.00 0.00 0.00 4.52
5593 5749 0.671251 GACATTTGGAACCGTTGCCA 59.329 50.000 0.00 0.00 0.00 4.92
5594 5750 1.067821 GACATTTGGAACCGTTGCCAA 59.932 47.619 9.71 9.71 42.11 4.52
5595 5751 1.068434 ACATTTGGAACCGTTGCCAAG 59.932 47.619 12.18 7.30 44.30 3.61
5596 5752 1.068434 CATTTGGAACCGTTGCCAAGT 59.932 47.619 12.18 8.80 44.30 3.16
5597 5753 0.457851 TTTGGAACCGTTGCCAAGTG 59.542 50.000 12.18 0.00 44.30 3.16
5598 5754 0.394488 TTGGAACCGTTGCCAAGTGA 60.394 50.000 9.71 0.00 39.14 3.41
5599 5755 0.817634 TGGAACCGTTGCCAAGTGAG 60.818 55.000 0.00 0.00 0.00 3.51
5600 5756 0.818040 GGAACCGTTGCCAAGTGAGT 60.818 55.000 0.00 0.00 0.00 3.41
5601 5757 0.307760 GAACCGTTGCCAAGTGAGTG 59.692 55.000 0.00 0.00 0.00 3.51
5602 5758 0.393808 AACCGTTGCCAAGTGAGTGT 60.394 50.000 0.00 0.00 0.00 3.55
5603 5759 1.095228 ACCGTTGCCAAGTGAGTGTG 61.095 55.000 0.00 0.00 0.00 3.82
5604 5760 1.648720 CGTTGCCAAGTGAGTGTGG 59.351 57.895 0.00 0.00 38.00 4.17
5605 5761 0.813610 CGTTGCCAAGTGAGTGTGGA 60.814 55.000 0.00 0.00 37.03 4.02
5606 5762 0.663153 GTTGCCAAGTGAGTGTGGAC 59.337 55.000 0.00 0.00 37.03 4.02
5607 5763 0.254462 TTGCCAAGTGAGTGTGGACA 59.746 50.000 0.00 0.00 37.03 4.02
5608 5764 0.254462 TGCCAAGTGAGTGTGGACAA 59.746 50.000 0.00 0.00 37.03 3.18
5609 5765 1.133823 TGCCAAGTGAGTGTGGACAAT 60.134 47.619 0.00 0.00 37.03 2.71
5610 5766 2.105649 TGCCAAGTGAGTGTGGACAATA 59.894 45.455 0.00 0.00 37.03 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.041235 ACGTAGGCAATCTAACTAGATGAGTAC 60.041 40.741 0.00 0.00 41.96 2.73
34 35 1.248785 TGCGCTCTCCGGAAGTAAGT 61.249 55.000 9.73 0.00 37.44 2.24
173 174 4.744259 TTGGAAGCCACGTACAGTATGTTT 60.744 41.667 2.36 0.00 39.24 2.83
178 179 1.965643 ACTTGGAAGCCACGTACAGTA 59.034 47.619 0.00 0.00 34.18 2.74
179 180 0.756903 ACTTGGAAGCCACGTACAGT 59.243 50.000 0.00 0.00 34.18 3.55
180 181 2.230508 TCTACTTGGAAGCCACGTACAG 59.769 50.000 0.00 0.00 37.24 2.74
181 182 2.241160 TCTACTTGGAAGCCACGTACA 58.759 47.619 0.00 0.00 37.24 2.90
182 183 3.308438 TTCTACTTGGAAGCCACGTAC 57.692 47.619 0.00 0.00 37.24 3.67
219 220 3.833304 TGCGGCACACACAAATCA 58.167 50.000 0.00 0.00 0.00 2.57
233 234 2.095567 CCAGATTTTGAACAGGAGTGCG 60.096 50.000 0.00 0.00 0.00 5.34
291 293 3.070018 CTGAACCTTAGTTGCAGGACTG 58.930 50.000 1.14 0.00 35.94 3.51
292 294 2.551071 GCTGAACCTTAGTTGCAGGACT 60.551 50.000 0.00 0.00 35.94 3.85
293 295 1.807142 GCTGAACCTTAGTTGCAGGAC 59.193 52.381 0.00 0.00 35.94 3.85
294 296 1.419762 TGCTGAACCTTAGTTGCAGGA 59.580 47.619 0.00 0.00 35.94 3.86
295 297 1.896220 TGCTGAACCTTAGTTGCAGG 58.104 50.000 0.00 0.00 35.94 4.85
296 298 3.988379 TTTGCTGAACCTTAGTTGCAG 57.012 42.857 0.00 0.00 36.57 4.41
297 299 4.935352 AATTTGCTGAACCTTAGTTGCA 57.065 36.364 0.00 0.00 35.94 4.08
298 300 5.858581 CACTAATTTGCTGAACCTTAGTTGC 59.141 40.000 0.00 0.00 35.94 4.17
299 301 6.206634 TCCACTAATTTGCTGAACCTTAGTTG 59.793 38.462 0.00 0.00 35.94 3.16
300 302 6.303839 TCCACTAATTTGCTGAACCTTAGTT 58.696 36.000 0.00 0.00 39.54 2.24
301 303 5.876357 TCCACTAATTTGCTGAACCTTAGT 58.124 37.500 0.00 0.00 33.97 2.24
302 304 5.940470 ACTCCACTAATTTGCTGAACCTTAG 59.060 40.000 0.00 0.00 0.00 2.18
303 305 5.876357 ACTCCACTAATTTGCTGAACCTTA 58.124 37.500 0.00 0.00 0.00 2.69
304 306 4.729868 ACTCCACTAATTTGCTGAACCTT 58.270 39.130 0.00 0.00 0.00 3.50
305 307 4.373156 ACTCCACTAATTTGCTGAACCT 57.627 40.909 0.00 0.00 0.00 3.50
337 339 2.880890 CTCAAAGGAACCAGGACAACAG 59.119 50.000 0.00 0.00 0.00 3.16
438 440 5.165676 CCATCATTCACACCAAATGTCTTG 58.834 41.667 0.00 0.00 40.64 3.02
450 452 2.170166 GGAGGCAAACCATCATTCACA 58.830 47.619 0.00 0.00 39.06 3.58
648 669 2.031944 GGCGTCCTCAAGAAGTTGTTTC 60.032 50.000 0.00 0.00 34.98 2.78
668 692 3.320541 CCTGCTACTGATAGAGAACCTGG 59.679 52.174 0.00 0.00 0.00 4.45
769 795 8.462016 ACAGATATGCATCCAAAGTCTTAAAAC 58.538 33.333 0.19 0.00 0.00 2.43
820 846 9.386122 ACAGGTCCATATAGAAATGTAGAAGAT 57.614 33.333 0.00 0.00 0.00 2.40
872 899 4.737578 TCACTAGAACACTAGGACCTTGT 58.262 43.478 0.00 0.00 38.23 3.16
1165 1192 6.603237 TCATTAAATCACCTTGTATGCGAG 57.397 37.500 0.00 0.00 0.00 5.03
1246 1274 6.270927 CCTCCAGAACCTATAAATCATGAGGA 59.729 42.308 0.09 0.00 36.23 3.71
1352 1381 0.996727 CTTTGCTGTAACGCCAACGC 60.997 55.000 0.00 0.00 45.53 4.84
1382 1411 8.794335 AGAAAAGACAATTGGGTTAGTATCTC 57.206 34.615 10.83 0.00 0.00 2.75
1434 1463 4.448537 TTTGTGTGGGAACAAAAGTCAG 57.551 40.909 0.23 0.00 44.79 3.51
1446 1475 7.442364 ACATCTATTCGAAGATATTTGTGTGGG 59.558 37.037 3.35 0.00 34.40 4.61
1532 1561 8.280258 TCCATCCTTCTTCTCATAAATGGTAT 57.720 34.615 0.00 0.00 35.14 2.73
1540 1569 5.471424 AGGTGATCCATCCTTCTTCTCATA 58.529 41.667 0.00 0.00 35.89 2.15
1631 1660 8.839310 ACATTACTTCAAGCCTACATCATATC 57.161 34.615 0.00 0.00 0.00 1.63
1632 1661 9.632638 AAACATTACTTCAAGCCTACATCATAT 57.367 29.630 0.00 0.00 0.00 1.78
1634 1663 7.944729 AAACATTACTTCAAGCCTACATCAT 57.055 32.000 0.00 0.00 0.00 2.45
1635 1664 9.109393 GATAAACATTACTTCAAGCCTACATCA 57.891 33.333 0.00 0.00 0.00 3.07
1636 1665 8.276325 CGATAAACATTACTTCAAGCCTACATC 58.724 37.037 0.00 0.00 0.00 3.06
1637 1666 7.254795 GCGATAAACATTACTTCAAGCCTACAT 60.255 37.037 0.00 0.00 0.00 2.29
1638 1667 6.036735 GCGATAAACATTACTTCAAGCCTACA 59.963 38.462 0.00 0.00 0.00 2.74
1639 1668 6.258068 AGCGATAAACATTACTTCAAGCCTAC 59.742 38.462 0.00 0.00 0.00 3.18
1640 1669 6.346096 AGCGATAAACATTACTTCAAGCCTA 58.654 36.000 0.00 0.00 0.00 3.93
1641 1670 5.186198 AGCGATAAACATTACTTCAAGCCT 58.814 37.500 0.00 0.00 0.00 4.58
1642 1671 5.294552 AGAGCGATAAACATTACTTCAAGCC 59.705 40.000 0.00 0.00 0.00 4.35
1643 1672 6.351327 AGAGCGATAAACATTACTTCAAGC 57.649 37.500 0.00 0.00 0.00 4.01
1691 1720 0.388907 CTGCAAAATTGGCCACCTCG 60.389 55.000 3.88 0.00 0.00 4.63
1801 1830 5.902681 TCTACTATCAGTTCACCGGAATTG 58.097 41.667 9.46 0.00 40.86 2.32
1807 1836 6.255887 GGAAACATTCTACTATCAGTTCACCG 59.744 42.308 0.00 0.00 0.00 4.94
1938 1967 4.620982 GGGGCATGCAAAACTATATCAAC 58.379 43.478 21.36 0.00 0.00 3.18
1972 2001 7.301054 CCATATTTCGCTAACTGAATCAATCC 58.699 38.462 0.00 0.00 0.00 3.01
2042 2071 9.103861 GAAACTAAGACAAATAGCAGCTAGAAT 57.896 33.333 8.43 0.00 0.00 2.40
2053 2082 9.581289 TCATTCAAAGGGAAACTAAGACAAATA 57.419 29.630 0.00 0.00 39.39 1.40
2058 2087 7.886338 ACATTCATTCAAAGGGAAACTAAGAC 58.114 34.615 0.00 0.00 39.39 3.01
2061 2090 8.243961 TGAACATTCATTCAAAGGGAAACTAA 57.756 30.769 0.00 0.00 39.39 2.24
2126 2156 4.729868 AGGGAGTATGATGGTAAATTGGC 58.270 43.478 0.00 0.00 0.00 4.52
2159 2189 9.492730 AGATACATCCATTTAAGGGACAAATTT 57.507 29.630 0.00 0.00 37.23 1.82
2161 2191 9.799106 CTAGATACATCCATTTAAGGGACAAAT 57.201 33.333 0.00 0.00 37.23 2.32
2164 2194 6.328934 TGCTAGATACATCCATTTAAGGGACA 59.671 38.462 0.00 0.00 37.23 4.02
2166 2196 6.239887 GGTGCTAGATACATCCATTTAAGGGA 60.240 42.308 0.00 0.00 39.14 4.20
2167 2197 5.940470 GGTGCTAGATACATCCATTTAAGGG 59.060 44.000 0.00 0.00 0.00 3.95
2168 2198 6.533730 TGGTGCTAGATACATCCATTTAAGG 58.466 40.000 0.00 0.00 0.00 2.69
2169 2199 7.716998 ACTTGGTGCTAGATACATCCATTTAAG 59.283 37.037 0.00 0.00 0.00 1.85
2170 2200 7.573710 ACTTGGTGCTAGATACATCCATTTAA 58.426 34.615 0.00 0.00 0.00 1.52
2171 2201 7.136822 ACTTGGTGCTAGATACATCCATTTA 57.863 36.000 0.00 0.00 0.00 1.40
2174 2204 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
2175 2205 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2187 2217 7.470147 TAGATGTATCTAGCACTAACTTGGTGC 60.470 40.741 19.67 19.67 46.34 5.01
2188 2218 6.810911 AGATGTATCTAGCACTAACTTGGTG 58.189 40.000 0.97 0.97 34.85 4.17
2189 2219 8.713708 ATAGATGTATCTAGCACTAACTTGGT 57.286 34.615 7.57 0.00 42.20 3.67
2190 2220 9.988815 AAATAGATGTATCTAGCACTAACTTGG 57.011 33.333 7.57 0.00 42.20 3.61
2209 2239 6.097412 GTCCCAAGCTTTTCCATCAAATAGAT 59.903 38.462 0.00 0.00 37.48 1.98
2210 2240 5.418840 GTCCCAAGCTTTTCCATCAAATAGA 59.581 40.000 0.00 0.00 0.00 1.98
2211 2241 5.185635 TGTCCCAAGCTTTTCCATCAAATAG 59.814 40.000 0.00 0.00 0.00 1.73
2212 2242 5.083122 TGTCCCAAGCTTTTCCATCAAATA 58.917 37.500 0.00 0.00 0.00 1.40
2213 2243 3.903090 TGTCCCAAGCTTTTCCATCAAAT 59.097 39.130 0.00 0.00 0.00 2.32
2214 2244 3.303938 TGTCCCAAGCTTTTCCATCAAA 58.696 40.909 0.00 0.00 0.00 2.69
2215 2245 2.956132 TGTCCCAAGCTTTTCCATCAA 58.044 42.857 0.00 0.00 0.00 2.57
2216 2246 2.673775 TGTCCCAAGCTTTTCCATCA 57.326 45.000 0.00 0.00 0.00 3.07
2217 2247 2.893489 ACTTGTCCCAAGCTTTTCCATC 59.107 45.455 0.00 0.00 0.00 3.51
2218 2248 2.962859 ACTTGTCCCAAGCTTTTCCAT 58.037 42.857 0.00 0.00 0.00 3.41
2219 2249 2.452600 ACTTGTCCCAAGCTTTTCCA 57.547 45.000 0.00 0.00 0.00 3.53
2220 2250 3.819564 AAACTTGTCCCAAGCTTTTCC 57.180 42.857 0.00 0.00 0.00 3.13
2221 2251 4.570772 GGAAAAACTTGTCCCAAGCTTTTC 59.429 41.667 24.02 24.02 39.62 2.29
2222 2252 4.513442 GGAAAAACTTGTCCCAAGCTTTT 58.487 39.130 14.51 14.51 30.80 2.27
2223 2253 3.430236 CGGAAAAACTTGTCCCAAGCTTT 60.430 43.478 0.00 2.23 0.00 3.51
2224 2254 2.100749 CGGAAAAACTTGTCCCAAGCTT 59.899 45.455 0.00 0.00 0.00 3.74
2225 2255 1.681264 CGGAAAAACTTGTCCCAAGCT 59.319 47.619 3.96 0.00 0.00 3.74
2226 2256 1.269569 CCGGAAAAACTTGTCCCAAGC 60.270 52.381 0.00 0.00 0.00 4.01
2227 2257 1.339929 CCCGGAAAAACTTGTCCCAAG 59.660 52.381 0.73 2.54 0.00 3.61
2228 2258 1.404843 CCCGGAAAAACTTGTCCCAA 58.595 50.000 0.73 0.00 0.00 4.12
2229 2259 1.110518 GCCCGGAAAAACTTGTCCCA 61.111 55.000 0.73 0.00 0.00 4.37
2230 2260 1.663739 GCCCGGAAAAACTTGTCCC 59.336 57.895 0.73 0.00 0.00 4.46
2231 2261 1.284715 CGCCCGGAAAAACTTGTCC 59.715 57.895 0.73 0.00 0.00 4.02
2232 2262 1.167781 TCCGCCCGGAAAAACTTGTC 61.168 55.000 0.73 0.00 42.05 3.18
2233 2263 1.152922 TCCGCCCGGAAAAACTTGT 60.153 52.632 0.73 0.00 42.05 3.16
2234 2264 1.579429 CTCCGCCCGGAAAAACTTG 59.421 57.895 0.73 0.00 44.66 3.16
2235 2265 1.602605 CCTCCGCCCGGAAAAACTT 60.603 57.895 0.73 0.00 44.66 2.66
2236 2266 2.033602 CCTCCGCCCGGAAAAACT 59.966 61.111 0.73 0.00 44.66 2.66
2237 2267 3.060000 CCCTCCGCCCGGAAAAAC 61.060 66.667 0.73 0.00 44.66 2.43
2238 2268 3.250734 TCCCTCCGCCCGGAAAAA 61.251 61.111 0.73 0.00 44.66 1.94
2239 2269 3.712907 CTCCCTCCGCCCGGAAAA 61.713 66.667 0.73 0.00 44.66 2.29
2240 2270 2.884179 ATACTCCCTCCGCCCGGAAA 62.884 60.000 0.73 0.00 44.66 3.13
2241 2271 3.384555 ATACTCCCTCCGCCCGGAA 62.385 63.158 0.73 0.00 44.66 4.30
2242 2272 3.829226 ATACTCCCTCCGCCCGGA 61.829 66.667 0.73 9.31 42.90 5.14
2243 2273 3.616721 CATACTCCCTCCGCCCGG 61.617 72.222 0.00 0.00 0.00 5.73
2244 2274 4.301027 GCATACTCCCTCCGCCCG 62.301 72.222 0.00 0.00 0.00 6.13
2245 2275 3.161450 TGCATACTCCCTCCGCCC 61.161 66.667 0.00 0.00 0.00 6.13
2246 2276 1.113517 TACTGCATACTCCCTCCGCC 61.114 60.000 0.00 0.00 0.00 6.13
2247 2277 0.750850 TTACTGCATACTCCCTCCGC 59.249 55.000 0.00 0.00 0.00 5.54
2248 2278 5.407407 AATATTACTGCATACTCCCTCCG 57.593 43.478 0.00 0.00 0.00 4.63
2249 2279 7.454225 AGAAAATATTACTGCATACTCCCTCC 58.546 38.462 0.00 0.00 0.00 4.30
2250 2280 9.998106 TTAGAAAATATTACTGCATACTCCCTC 57.002 33.333 0.00 0.00 0.00 4.30
2251 2281 9.780186 GTTAGAAAATATTACTGCATACTCCCT 57.220 33.333 0.00 0.00 0.00 4.20
2252 2282 9.780186 AGTTAGAAAATATTACTGCATACTCCC 57.220 33.333 0.00 0.00 0.00 4.30
2279 2309 5.367945 ACTAACTGGAAAACTCTGGTGAA 57.632 39.130 0.00 0.00 0.00 3.18
2354 2384 6.183360 GCGGCTAACAGAAGGATATTCTTTTT 60.183 38.462 0.00 0.00 0.00 1.94
2441 2471 4.701956 TTCTTAAAGCCAATGCAGTAGC 57.298 40.909 0.00 0.00 41.13 3.58
2447 2477 5.852755 GCATTTTGTTTCTTAAAGCCAATGC 59.147 36.000 0.00 0.00 35.79 3.56
2449 2479 7.930865 TGTAGCATTTTGTTTCTTAAAGCCAAT 59.069 29.630 0.00 0.00 0.00 3.16
2507 2537 6.622549 TGTCCACAAAAACAAGTAACGAATT 58.377 32.000 0.00 0.00 0.00 2.17
2601 2633 9.101655 GTGTAACACCATATACTTTTTACGGAT 57.898 33.333 0.00 0.00 36.32 4.18
2672 2712 8.082242 AGAAAACATAGCCACAAACATAAAGAC 58.918 33.333 0.00 0.00 0.00 3.01
2688 2729 9.014297 ACTGAAAAAGTGGGATAGAAAACATAG 57.986 33.333 0.00 0.00 37.88 2.23
2748 2789 3.940852 TGCCAGCACAGATTATAGTTGTG 59.059 43.478 8.26 8.26 43.78 3.33
2749 2790 4.194640 CTGCCAGCACAGATTATAGTTGT 58.805 43.478 0.00 0.00 40.25 3.32
2782 2823 3.539604 AGCTACAGCCAAGCAAGAATAG 58.460 45.455 5.46 0.00 42.62 1.73
2851 2892 2.250188 GCAACATACGCGAGCATTTTT 58.750 42.857 15.93 0.00 0.00 1.94
2863 2904 9.236691 CCAAATAGTGAACATATTGCAACATAC 57.763 33.333 0.00 0.00 0.00 2.39
2884 2925 3.447950 ACCTACCGTAAGAGACCCAAAT 58.552 45.455 0.00 0.00 43.02 2.32
2887 2928 2.610438 AACCTACCGTAAGAGACCCA 57.390 50.000 0.00 0.00 43.02 4.51
2933 2974 5.572896 GGGCGTTCTAAATCAATTTGAACAG 59.427 40.000 19.19 15.34 37.48 3.16
3012 3053 6.932400 TCACTCCGTTAAATGAGAGCTTTAAA 59.068 34.615 8.96 0.00 31.75 1.52
3171 3212 3.026694 AGGCCCTGAAGTAATGCAATTC 58.973 45.455 0.00 0.00 37.87 2.17
3186 3227 3.315596 GGAATACTGTAGGTTAGGCCCT 58.684 50.000 0.00 0.00 38.26 5.19
3216 3257 9.689501 AGAATATTGGCAATTCCATTTCAATTT 57.310 25.926 19.21 0.00 46.04 1.82
3223 3264 9.151177 AGTGATAAGAATATTGGCAATTCCATT 57.849 29.630 19.21 11.98 46.04 3.16
3241 3282 9.692749 TTTGTCTGTAGTTGTTCTAGTGATAAG 57.307 33.333 0.00 0.00 0.00 1.73
3244 3285 6.929606 GGTTTGTCTGTAGTTGTTCTAGTGAT 59.070 38.462 0.00 0.00 0.00 3.06
3294 3335 7.801716 TTTGATATACTTGTATGTGGGCTTC 57.198 36.000 3.75 0.00 0.00 3.86
3387 3430 1.134401 TGCAAGCAGGAGCCTACATAC 60.134 52.381 0.00 0.00 43.56 2.39
3420 3463 5.931146 GGAATTACAACCATTGCACATTCAA 59.069 36.000 0.00 0.00 30.82 2.69
3480 3523 1.106285 GTCCTGGGTGAATGGCAATC 58.894 55.000 0.00 0.00 0.00 2.67
3492 3535 4.026356 ACTTCTCAGAAAATGTCCTGGG 57.974 45.455 0.00 0.00 32.30 4.45
3525 3568 9.495754 GTAGACATGCTTAAAAAGATTGCTAAG 57.504 33.333 0.00 0.00 0.00 2.18
3546 3589 7.695618 GCAAAATTGATGTCTGAGATTGTAGAC 59.304 37.037 0.00 0.00 42.77 2.59
3617 3663 4.177026 GGTGCTTGTACACTCATCAGTAG 58.823 47.826 0.00 0.00 40.52 2.57
3735 3792 6.183360 TGCAATGAGATATTTCAGACGAGGTA 60.183 38.462 2.10 0.00 0.00 3.08
3842 3899 4.756084 AACTTCTAGCTCACAAATGTGC 57.244 40.909 8.67 0.00 45.25 4.57
3881 4021 3.503748 GCACTAAGCCTTTCATCACAAGT 59.496 43.478 0.00 0.00 37.23 3.16
3961 4102 5.024555 GTGCTCGAAAGATGCAAATTACTC 58.975 41.667 0.00 0.00 42.68 2.59
3992 4133 9.810231 GGAAAAGTTGTTGTTGCAAATATATTG 57.190 29.630 0.00 0.00 0.00 1.90
3993 4134 8.998377 GGGAAAAGTTGTTGTTGCAAATATATT 58.002 29.630 0.00 0.00 0.00 1.28
4014 4155 4.039852 GGCCTGAAAATAACACAAGGGAAA 59.960 41.667 0.00 0.00 0.00 3.13
4173 4314 7.783090 TTTGCATTCATGAAACTGCTAAAAA 57.217 28.000 26.26 18.45 35.66 1.94
4197 4338 7.790782 TGGGAAAATGGCTAACTAGAAAATT 57.209 32.000 0.00 0.00 0.00 1.82
4295 4436 4.337274 TCATAGTGCTGCATTTCAGAATGG 59.663 41.667 5.27 0.00 45.72 3.16
4383 4524 7.149015 CGCATTCATAAGTCAATACTACGTACC 60.149 40.741 0.00 0.00 33.75 3.34
4384 4525 7.588854 TCGCATTCATAAGTCAATACTACGTAC 59.411 37.037 0.00 0.00 33.75 3.67
4391 4532 8.749841 ATCTAGTCGCATTCATAAGTCAATAC 57.250 34.615 0.00 0.00 0.00 1.89
4407 4548 4.310769 ACCATCAAATGCTATCTAGTCGC 58.689 43.478 0.00 0.00 0.00 5.19
4432 4574 4.261656 CCCAGTCCTGCGATAGTAAAGTAG 60.262 50.000 0.00 0.00 39.35 2.57
4444 4586 1.943116 CTGAGAGTCCCAGTCCTGCG 61.943 65.000 0.00 0.00 0.00 5.18
4499 4641 1.963855 CCCCGCAACAATCGTCACA 60.964 57.895 0.00 0.00 0.00 3.58
4664 4806 8.644374 ATGTTAGGGAGATCTCTATGTTAGAC 57.356 38.462 21.81 10.46 0.00 2.59
4694 4836 4.141274 TGGACTGAGATTCCAAAAGTTCCA 60.141 41.667 0.00 0.00 40.35 3.53
4762 4904 7.996098 ATTGTTAATGTGCTAAACCAGTACT 57.004 32.000 0.00 0.00 40.30 2.73
4781 4923 9.944376 ACGCATATATGTAGATCCTTAATTGTT 57.056 29.630 14.14 0.00 0.00 2.83
4865 5007 5.054477 TCCCTAAACTGAAGAAACGTCAAG 58.946 41.667 0.00 0.00 0.00 3.02
4969 5111 2.104111 TGCATCAGAATTACTACCCCGG 59.896 50.000 0.00 0.00 0.00 5.73
4994 5136 6.161855 TGCCTCTGTAGTTCCATAAGTATG 57.838 41.667 0.00 0.00 0.00 2.39
5018 5160 2.031495 ACTCCACTTAACTCCTGCCT 57.969 50.000 0.00 0.00 0.00 4.75
5019 5161 2.861147 AACTCCACTTAACTCCTGCC 57.139 50.000 0.00 0.00 0.00 4.85
5020 5162 4.793028 GCAAAAACTCCACTTAACTCCTGC 60.793 45.833 0.00 0.00 0.00 4.85
5021 5163 4.580580 AGCAAAAACTCCACTTAACTCCTG 59.419 41.667 0.00 0.00 0.00 3.86
5022 5164 4.793201 AGCAAAAACTCCACTTAACTCCT 58.207 39.130 0.00 0.00 0.00 3.69
5050 5192 2.741433 ATGCATCATGGTGGCATCC 58.259 52.632 8.33 0.00 44.41 3.51
5056 5199 8.326680 TGTACTATAAATGATGCATCATGGTG 57.673 34.615 36.37 25.85 46.22 4.17
5315 5471 3.512496 TGGGGTCGGATGTATATAAGCA 58.488 45.455 0.00 0.00 0.00 3.91
5316 5472 4.755266 ATGGGGTCGGATGTATATAAGC 57.245 45.455 0.00 0.00 0.00 3.09
5317 5473 7.996098 AAAAATGGGGTCGGATGTATATAAG 57.004 36.000 0.00 0.00 0.00 1.73
5340 5496 7.542824 GGCTATTTTAATGTGCGGACTTAAAAA 59.457 33.333 25.16 19.79 37.67 1.94
5341 5497 7.030768 GGCTATTTTAATGTGCGGACTTAAAA 58.969 34.615 24.37 24.37 38.18 1.52
5342 5498 6.557110 GGCTATTTTAATGTGCGGACTTAAA 58.443 36.000 8.99 13.05 0.00 1.52
5343 5499 5.220700 CGGCTATTTTAATGTGCGGACTTAA 60.221 40.000 8.99 7.95 0.00 1.85
5344 5500 4.271533 CGGCTATTTTAATGTGCGGACTTA 59.728 41.667 8.99 1.89 0.00 2.24
5345 5501 3.064820 CGGCTATTTTAATGTGCGGACTT 59.935 43.478 8.99 0.00 0.00 3.01
5346 5502 2.612212 CGGCTATTTTAATGTGCGGACT 59.388 45.455 8.99 0.00 0.00 3.85
5347 5503 2.853281 GCGGCTATTTTAATGTGCGGAC 60.853 50.000 0.00 0.00 0.00 4.79
5348 5504 1.332375 GCGGCTATTTTAATGTGCGGA 59.668 47.619 0.00 0.00 0.00 5.54
5349 5505 1.064803 TGCGGCTATTTTAATGTGCGG 59.935 47.619 0.00 0.00 0.00 5.69
5350 5506 2.466870 TGCGGCTATTTTAATGTGCG 57.533 45.000 0.00 0.00 0.00 5.34
5351 5507 8.612619 ACTATATATGCGGCTATTTTAATGTGC 58.387 33.333 0.00 0.00 0.00 4.57
5381 5537 9.726438 AGAACTACTACTGCATTTGAACTATTT 57.274 29.630 0.00 0.00 0.00 1.40
5382 5538 9.372369 GAGAACTACTACTGCATTTGAACTATT 57.628 33.333 0.00 0.00 0.00 1.73
5383 5539 8.531982 TGAGAACTACTACTGCATTTGAACTAT 58.468 33.333 0.00 0.00 0.00 2.12
5384 5540 7.892609 TGAGAACTACTACTGCATTTGAACTA 58.107 34.615 0.00 0.00 0.00 2.24
5385 5541 6.759272 TGAGAACTACTACTGCATTTGAACT 58.241 36.000 0.00 0.00 0.00 3.01
5386 5542 7.602517 ATGAGAACTACTACTGCATTTGAAC 57.397 36.000 0.00 0.00 0.00 3.18
5387 5543 9.371136 CTAATGAGAACTACTACTGCATTTGAA 57.629 33.333 0.00 0.00 0.00 2.69
5388 5544 8.749354 TCTAATGAGAACTACTACTGCATTTGA 58.251 33.333 0.00 0.00 0.00 2.69
5389 5545 8.932945 TCTAATGAGAACTACTACTGCATTTG 57.067 34.615 0.00 0.00 0.00 2.32
5390 5546 9.944376 TTTCTAATGAGAACTACTACTGCATTT 57.056 29.630 0.00 0.00 41.52 2.32
5391 5547 9.944376 TTTTCTAATGAGAACTACTACTGCATT 57.056 29.630 0.00 0.00 41.52 3.56
5392 5548 9.593134 CTTTTCTAATGAGAACTACTACTGCAT 57.407 33.333 0.00 0.00 41.52 3.96
5393 5549 8.585881 ACTTTTCTAATGAGAACTACTACTGCA 58.414 33.333 0.00 0.00 41.52 4.41
5394 5550 8.989653 ACTTTTCTAATGAGAACTACTACTGC 57.010 34.615 0.00 0.00 41.52 4.40
5411 5567 8.745590 GGCAAGGGTAATATTTGAACTTTTCTA 58.254 33.333 0.00 0.00 0.00 2.10
5412 5568 7.310423 GGGCAAGGGTAATATTTGAACTTTTCT 60.310 37.037 0.00 0.00 0.00 2.52
5413 5569 6.816640 GGGCAAGGGTAATATTTGAACTTTTC 59.183 38.462 0.00 0.00 0.00 2.29
5414 5570 6.296202 GGGGCAAGGGTAATATTTGAACTTTT 60.296 38.462 0.00 0.00 0.00 2.27
5415 5571 5.188948 GGGGCAAGGGTAATATTTGAACTTT 59.811 40.000 0.00 0.00 0.00 2.66
5416 5572 4.714802 GGGGCAAGGGTAATATTTGAACTT 59.285 41.667 0.00 0.00 0.00 2.66
5417 5573 4.016572 AGGGGCAAGGGTAATATTTGAACT 60.017 41.667 0.00 0.00 0.00 3.01
5418 5574 4.286707 AGGGGCAAGGGTAATATTTGAAC 58.713 43.478 0.00 0.00 0.00 3.18
5419 5575 4.618378 AGGGGCAAGGGTAATATTTGAA 57.382 40.909 0.00 0.00 0.00 2.69
5420 5576 4.618378 AAGGGGCAAGGGTAATATTTGA 57.382 40.909 0.00 0.00 0.00 2.69
5421 5577 6.294508 CGATTAAGGGGCAAGGGTAATATTTG 60.295 42.308 0.00 0.00 0.00 2.32
5422 5578 5.773176 CGATTAAGGGGCAAGGGTAATATTT 59.227 40.000 0.00 0.00 0.00 1.40
5423 5579 5.321927 CGATTAAGGGGCAAGGGTAATATT 58.678 41.667 0.00 0.00 0.00 1.28
5424 5580 4.809691 GCGATTAAGGGGCAAGGGTAATAT 60.810 45.833 0.00 0.00 0.00 1.28
5425 5581 3.497227 GCGATTAAGGGGCAAGGGTAATA 60.497 47.826 0.00 0.00 0.00 0.98
5426 5582 2.751816 GCGATTAAGGGGCAAGGGTAAT 60.752 50.000 0.00 0.00 0.00 1.89
5427 5583 1.409101 GCGATTAAGGGGCAAGGGTAA 60.409 52.381 0.00 0.00 0.00 2.85
5428 5584 0.181824 GCGATTAAGGGGCAAGGGTA 59.818 55.000 0.00 0.00 0.00 3.69
5429 5585 1.076995 GCGATTAAGGGGCAAGGGT 60.077 57.895 0.00 0.00 0.00 4.34
5430 5586 1.828224 GGCGATTAAGGGGCAAGGG 60.828 63.158 0.00 0.00 0.00 3.95
5431 5587 0.682855 TTGGCGATTAAGGGGCAAGG 60.683 55.000 11.84 0.00 42.78 3.61
5432 5588 2.880770 TTGGCGATTAAGGGGCAAG 58.119 52.632 11.84 0.00 42.78 4.01
5434 5590 1.771854 TCTATTGGCGATTAAGGGGCA 59.228 47.619 0.00 1.29 36.89 5.36
5435 5591 2.561478 TCTATTGGCGATTAAGGGGC 57.439 50.000 0.00 0.00 0.00 5.80
5436 5592 2.749621 GCATCTATTGGCGATTAAGGGG 59.250 50.000 0.00 0.00 0.00 4.79
5437 5593 3.679389 AGCATCTATTGGCGATTAAGGG 58.321 45.455 0.00 0.00 34.54 3.95
5438 5594 4.756642 TGAAGCATCTATTGGCGATTAAGG 59.243 41.667 0.00 0.00 34.54 2.69
5439 5595 5.698089 TCTGAAGCATCTATTGGCGATTAAG 59.302 40.000 0.00 0.00 34.54 1.85
5440 5596 5.610398 TCTGAAGCATCTATTGGCGATTAA 58.390 37.500 0.00 0.00 34.54 1.40
5441 5597 5.213891 TCTGAAGCATCTATTGGCGATTA 57.786 39.130 0.00 0.00 34.54 1.75
5442 5598 4.077300 TCTGAAGCATCTATTGGCGATT 57.923 40.909 0.00 0.00 34.54 3.34
5443 5599 3.758755 TCTGAAGCATCTATTGGCGAT 57.241 42.857 0.00 0.00 34.54 4.58
5444 5600 3.323115 AGATCTGAAGCATCTATTGGCGA 59.677 43.478 0.00 0.00 34.54 5.54
5445 5601 3.661944 AGATCTGAAGCATCTATTGGCG 58.338 45.455 0.00 0.00 34.54 5.69
5446 5602 4.455190 GGAAGATCTGAAGCATCTATTGGC 59.545 45.833 0.00 0.00 29.97 4.52
5447 5603 5.867330 AGGAAGATCTGAAGCATCTATTGG 58.133 41.667 0.00 0.00 29.97 3.16
5448 5604 6.990939 TGAAGGAAGATCTGAAGCATCTATTG 59.009 38.462 0.00 0.00 29.97 1.90
5449 5605 7.134362 TGAAGGAAGATCTGAAGCATCTATT 57.866 36.000 0.00 0.00 29.97 1.73
5450 5606 6.327104 ACTGAAGGAAGATCTGAAGCATCTAT 59.673 38.462 0.00 0.00 29.97 1.98
5451 5607 5.660417 ACTGAAGGAAGATCTGAAGCATCTA 59.340 40.000 0.00 0.00 29.97 1.98
5452 5608 4.470664 ACTGAAGGAAGATCTGAAGCATCT 59.529 41.667 0.00 0.00 31.51 2.90
5453 5609 4.768583 ACTGAAGGAAGATCTGAAGCATC 58.231 43.478 0.00 0.00 0.00 3.91
5454 5610 4.840716 ACTGAAGGAAGATCTGAAGCAT 57.159 40.909 0.00 0.00 0.00 3.79
5455 5611 4.630644 AACTGAAGGAAGATCTGAAGCA 57.369 40.909 0.00 0.00 0.00 3.91
5456 5612 5.729510 AGTAACTGAAGGAAGATCTGAAGC 58.270 41.667 0.00 0.00 0.00 3.86
5457 5613 7.117523 CACAAGTAACTGAAGGAAGATCTGAAG 59.882 40.741 0.00 0.00 0.00 3.02
5458 5614 6.931281 CACAAGTAACTGAAGGAAGATCTGAA 59.069 38.462 0.00 0.00 0.00 3.02
5459 5615 6.267699 TCACAAGTAACTGAAGGAAGATCTGA 59.732 38.462 0.00 0.00 0.00 3.27
5460 5616 6.459066 TCACAAGTAACTGAAGGAAGATCTG 58.541 40.000 0.00 0.00 0.00 2.90
5461 5617 6.268847 ACTCACAAGTAACTGAAGGAAGATCT 59.731 38.462 0.00 0.00 32.59 2.75
5462 5618 6.459923 ACTCACAAGTAACTGAAGGAAGATC 58.540 40.000 0.00 0.00 32.59 2.75
5463 5619 6.426646 ACTCACAAGTAACTGAAGGAAGAT 57.573 37.500 0.00 0.00 32.59 2.40
5464 5620 5.871396 ACTCACAAGTAACTGAAGGAAGA 57.129 39.130 0.00 0.00 32.59 2.87
5465 5621 5.817816 ACAACTCACAAGTAACTGAAGGAAG 59.182 40.000 0.00 0.00 33.48 3.46
5466 5622 5.741011 ACAACTCACAAGTAACTGAAGGAA 58.259 37.500 0.00 0.00 33.48 3.36
5467 5623 5.353394 ACAACTCACAAGTAACTGAAGGA 57.647 39.130 0.00 0.00 33.48 3.36
5468 5624 5.276868 CGAACAACTCACAAGTAACTGAAGG 60.277 44.000 0.00 0.00 33.48 3.46
5469 5625 5.518847 TCGAACAACTCACAAGTAACTGAAG 59.481 40.000 0.00 0.00 33.48 3.02
5470 5626 5.412640 TCGAACAACTCACAAGTAACTGAA 58.587 37.500 0.00 0.00 33.48 3.02
5471 5627 5.001237 TCGAACAACTCACAAGTAACTGA 57.999 39.130 0.00 0.00 33.48 3.41
5472 5628 5.670097 CATCGAACAACTCACAAGTAACTG 58.330 41.667 0.00 0.00 33.48 3.16
5473 5629 4.211374 GCATCGAACAACTCACAAGTAACT 59.789 41.667 0.00 0.00 33.48 2.24
5474 5630 4.211374 AGCATCGAACAACTCACAAGTAAC 59.789 41.667 0.00 0.00 33.48 2.50
5475 5631 4.211164 CAGCATCGAACAACTCACAAGTAA 59.789 41.667 0.00 0.00 33.48 2.24
5476 5632 3.740832 CAGCATCGAACAACTCACAAGTA 59.259 43.478 0.00 0.00 33.48 2.24
5477 5633 2.545526 CAGCATCGAACAACTCACAAGT 59.454 45.455 0.00 0.00 37.32 3.16
5478 5634 2.802247 TCAGCATCGAACAACTCACAAG 59.198 45.455 0.00 0.00 0.00 3.16
5479 5635 2.832563 TCAGCATCGAACAACTCACAA 58.167 42.857 0.00 0.00 0.00 3.33
5480 5636 2.524569 TCAGCATCGAACAACTCACA 57.475 45.000 0.00 0.00 0.00 3.58
5481 5637 4.410492 AATTCAGCATCGAACAACTCAC 57.590 40.909 0.00 0.00 0.00 3.51
5482 5638 4.275689 ACAAATTCAGCATCGAACAACTCA 59.724 37.500 0.00 0.00 0.00 3.41
5483 5639 4.787598 ACAAATTCAGCATCGAACAACTC 58.212 39.130 0.00 0.00 0.00 3.01
5484 5640 4.836125 ACAAATTCAGCATCGAACAACT 57.164 36.364 0.00 0.00 0.00 3.16
5485 5641 4.975502 TCAACAAATTCAGCATCGAACAAC 59.024 37.500 0.00 0.00 0.00 3.32
5486 5642 5.180367 TCAACAAATTCAGCATCGAACAA 57.820 34.783 0.00 0.00 0.00 2.83
5487 5643 4.827304 TCAACAAATTCAGCATCGAACA 57.173 36.364 0.00 0.00 0.00 3.18
5488 5644 4.030977 GCATCAACAAATTCAGCATCGAAC 59.969 41.667 0.00 0.00 0.00 3.95
5489 5645 4.168014 GCATCAACAAATTCAGCATCGAA 58.832 39.130 0.00 0.00 0.00 3.71
5490 5646 3.190953 TGCATCAACAAATTCAGCATCGA 59.809 39.130 0.00 0.00 0.00 3.59
5491 5647 3.503891 TGCATCAACAAATTCAGCATCG 58.496 40.909 0.00 0.00 0.00 3.84
5492 5648 6.091577 TCAAATGCATCAACAAATTCAGCATC 59.908 34.615 0.00 0.00 40.00 3.91
5493 5649 5.935206 TCAAATGCATCAACAAATTCAGCAT 59.065 32.000 0.00 0.00 42.40 3.79
5494 5650 5.298347 TCAAATGCATCAACAAATTCAGCA 58.702 33.333 0.00 0.00 34.78 4.41
5495 5651 5.849357 TCAAATGCATCAACAAATTCAGC 57.151 34.783 0.00 0.00 0.00 4.26
5496 5652 7.179927 TGTTCAAATGCATCAACAAATTCAG 57.820 32.000 13.62 0.00 0.00 3.02
5497 5653 7.549615 TTGTTCAAATGCATCAACAAATTCA 57.450 28.000 20.81 6.34 36.14 2.57
5498 5654 7.909121 TGTTTGTTCAAATGCATCAACAAATTC 59.091 29.630 28.79 22.23 45.57 2.17
5499 5655 7.697291 GTGTTTGTTCAAATGCATCAACAAATT 59.303 29.630 28.79 8.91 45.57 1.82
5500 5656 7.066043 AGTGTTTGTTCAAATGCATCAACAAAT 59.934 29.630 28.79 19.08 45.57 2.32
5501 5657 6.370994 AGTGTTTGTTCAAATGCATCAACAAA 59.629 30.769 25.62 25.62 43.21 2.83
5502 5658 5.873712 AGTGTTTGTTCAAATGCATCAACAA 59.126 32.000 19.86 19.86 37.04 2.83
5503 5659 5.417811 AGTGTTTGTTCAAATGCATCAACA 58.582 33.333 12.49 12.49 0.00 3.33
5504 5660 5.971895 AGTGTTTGTTCAAATGCATCAAC 57.028 34.783 0.00 4.44 0.00 3.18
5505 5661 6.804677 ACTAGTGTTTGTTCAAATGCATCAA 58.195 32.000 0.00 0.00 0.00 2.57
5506 5662 6.389830 ACTAGTGTTTGTTCAAATGCATCA 57.610 33.333 0.00 0.00 0.00 3.07
5507 5663 6.519761 CGTACTAGTGTTTGTTCAAATGCATC 59.480 38.462 5.39 0.00 0.00 3.91
5508 5664 6.370593 CGTACTAGTGTTTGTTCAAATGCAT 58.629 36.000 5.39 0.00 0.00 3.96
5509 5665 5.743467 CGTACTAGTGTTTGTTCAAATGCA 58.257 37.500 5.39 0.00 0.00 3.96
5510 5666 4.611366 GCGTACTAGTGTTTGTTCAAATGC 59.389 41.667 5.39 0.00 0.00 3.56
5511 5667 5.743467 TGCGTACTAGTGTTTGTTCAAATG 58.257 37.500 5.39 0.00 0.00 2.32
5512 5668 5.994887 TGCGTACTAGTGTTTGTTCAAAT 57.005 34.783 5.39 0.00 0.00 2.32
5513 5669 5.994887 ATGCGTACTAGTGTTTGTTCAAA 57.005 34.783 5.39 0.00 0.00 2.69
5514 5670 5.277586 CCAATGCGTACTAGTGTTTGTTCAA 60.278 40.000 5.39 0.00 0.00 2.69
5515 5671 4.212425 CCAATGCGTACTAGTGTTTGTTCA 59.788 41.667 5.39 0.00 0.00 3.18
5516 5672 4.212636 ACCAATGCGTACTAGTGTTTGTTC 59.787 41.667 5.39 0.00 0.00 3.18
5517 5673 4.131596 ACCAATGCGTACTAGTGTTTGTT 58.868 39.130 5.39 0.00 0.00 2.83
5518 5674 3.735591 ACCAATGCGTACTAGTGTTTGT 58.264 40.909 5.39 0.00 0.00 2.83
5519 5675 3.124636 GGACCAATGCGTACTAGTGTTTG 59.875 47.826 5.39 2.38 0.00 2.93
5520 5676 3.007614 AGGACCAATGCGTACTAGTGTTT 59.992 43.478 5.39 0.00 0.00 2.83
5521 5677 2.565834 AGGACCAATGCGTACTAGTGTT 59.434 45.455 5.39 0.00 0.00 3.32
5522 5678 2.176889 AGGACCAATGCGTACTAGTGT 58.823 47.619 5.39 0.00 0.00 3.55
5523 5679 2.961526 AGGACCAATGCGTACTAGTG 57.038 50.000 5.39 0.00 0.00 2.74
5524 5680 3.243771 GCATAGGACCAATGCGTACTAGT 60.244 47.826 0.00 0.00 40.27 2.57
5525 5681 3.318017 GCATAGGACCAATGCGTACTAG 58.682 50.000 0.00 0.00 40.27 2.57
5526 5682 3.380479 GCATAGGACCAATGCGTACTA 57.620 47.619 0.00 0.00 40.27 1.82
5527 5683 2.240493 GCATAGGACCAATGCGTACT 57.760 50.000 0.00 0.00 40.27 2.73
5533 5689 4.637483 AATCGTTTGCATAGGACCAATG 57.363 40.909 1.57 0.00 0.00 2.82
5534 5690 5.659440 AAAATCGTTTGCATAGGACCAAT 57.341 34.783 1.57 0.00 0.00 3.16
5535 5691 5.461032 AAAAATCGTTTGCATAGGACCAA 57.539 34.783 1.57 0.00 0.00 3.67
5536 5692 6.383415 GTTAAAAATCGTTTGCATAGGACCA 58.617 36.000 1.57 0.00 0.00 4.02
5537 5693 5.803461 GGTTAAAAATCGTTTGCATAGGACC 59.197 40.000 1.57 0.00 0.00 4.46
5538 5694 5.803461 GGGTTAAAAATCGTTTGCATAGGAC 59.197 40.000 1.57 0.00 0.00 3.85
5539 5695 5.105675 GGGGTTAAAAATCGTTTGCATAGGA 60.106 40.000 2.04 2.04 0.00 2.94
5540 5696 5.105513 AGGGGTTAAAAATCGTTTGCATAGG 60.106 40.000 0.00 0.00 0.00 2.57
5541 5697 5.961272 AGGGGTTAAAAATCGTTTGCATAG 58.039 37.500 0.00 0.00 0.00 2.23
5542 5698 5.986501 AGGGGTTAAAAATCGTTTGCATA 57.013 34.783 0.00 0.00 0.00 3.14
5543 5699 4.882842 AGGGGTTAAAAATCGTTTGCAT 57.117 36.364 0.00 0.00 0.00 3.96
5544 5700 4.674281 AAGGGGTTAAAAATCGTTTGCA 57.326 36.364 0.00 0.00 0.00 4.08
5545 5701 5.332732 CGAAAAGGGGTTAAAAATCGTTTGC 60.333 40.000 0.00 0.00 0.00 3.68
5546 5702 5.332732 GCGAAAAGGGGTTAAAAATCGTTTG 60.333 40.000 0.00 0.00 0.00 2.93
5547 5703 4.746115 GCGAAAAGGGGTTAAAAATCGTTT 59.254 37.500 0.00 0.00 0.00 3.60
5548 5704 4.300803 GCGAAAAGGGGTTAAAAATCGTT 58.699 39.130 0.00 0.00 0.00 3.85
5549 5705 3.609879 CGCGAAAAGGGGTTAAAAATCGT 60.610 43.478 0.00 0.00 0.00 3.73
5550 5706 2.912345 CGCGAAAAGGGGTTAAAAATCG 59.088 45.455 0.00 0.00 0.00 3.34
5551 5707 4.163458 TCGCGAAAAGGGGTTAAAAATC 57.837 40.909 6.20 0.00 0.00 2.17
5552 5708 4.218852 TCATCGCGAAAAGGGGTTAAAAAT 59.781 37.500 15.24 0.00 0.00 1.82
5553 5709 3.568853 TCATCGCGAAAAGGGGTTAAAAA 59.431 39.130 15.24 0.00 0.00 1.94
5554 5710 3.058085 GTCATCGCGAAAAGGGGTTAAAA 60.058 43.478 15.24 0.00 0.00 1.52
5555 5711 2.485038 GTCATCGCGAAAAGGGGTTAAA 59.515 45.455 15.24 0.00 0.00 1.52
5556 5712 2.078392 GTCATCGCGAAAAGGGGTTAA 58.922 47.619 15.24 0.00 0.00 2.01
5557 5713 1.002201 TGTCATCGCGAAAAGGGGTTA 59.998 47.619 15.24 0.00 0.00 2.85
5558 5714 0.250553 TGTCATCGCGAAAAGGGGTT 60.251 50.000 15.24 0.00 0.00 4.11
5559 5715 0.035439 ATGTCATCGCGAAAAGGGGT 60.035 50.000 15.24 0.00 0.00 4.95
5560 5716 1.094785 AATGTCATCGCGAAAAGGGG 58.905 50.000 15.24 0.00 0.00 4.79
5561 5717 2.518949 CAAATGTCATCGCGAAAAGGG 58.481 47.619 15.24 0.32 0.00 3.95
5562 5718 2.161410 TCCAAATGTCATCGCGAAAAGG 59.839 45.455 15.24 7.11 0.00 3.11
5563 5719 3.469899 TCCAAATGTCATCGCGAAAAG 57.530 42.857 15.24 6.56 0.00 2.27
5564 5720 3.560503 GTTCCAAATGTCATCGCGAAAA 58.439 40.909 15.24 0.02 0.00 2.29
5565 5721 2.095466 GGTTCCAAATGTCATCGCGAAA 60.095 45.455 15.24 0.49 0.00 3.46
5566 5722 1.466950 GGTTCCAAATGTCATCGCGAA 59.533 47.619 15.24 0.00 0.00 4.70
5567 5723 1.083489 GGTTCCAAATGTCATCGCGA 58.917 50.000 13.09 13.09 0.00 5.87
5568 5724 0.247655 CGGTTCCAAATGTCATCGCG 60.248 55.000 0.00 0.00 0.00 5.87
5569 5725 0.802494 ACGGTTCCAAATGTCATCGC 59.198 50.000 0.00 0.00 0.00 4.58
5570 5726 2.850321 CAACGGTTCCAAATGTCATCG 58.150 47.619 0.00 0.00 0.00 3.84
5571 5727 2.595386 GCAACGGTTCCAAATGTCATC 58.405 47.619 0.00 0.00 0.00 2.92
5572 5728 1.272212 GGCAACGGTTCCAAATGTCAT 59.728 47.619 0.00 0.00 0.00 3.06
5573 5729 0.671251 GGCAACGGTTCCAAATGTCA 59.329 50.000 0.00 0.00 0.00 3.58
5574 5730 0.671251 TGGCAACGGTTCCAAATGTC 59.329 50.000 0.00 0.00 42.51 3.06
5575 5731 1.068434 CTTGGCAACGGTTCCAAATGT 59.932 47.619 5.94 0.00 41.35 2.71
5576 5732 1.068434 ACTTGGCAACGGTTCCAAATG 59.932 47.619 5.94 0.00 41.35 2.32
5577 5733 1.068434 CACTTGGCAACGGTTCCAAAT 59.932 47.619 5.94 0.00 41.35 2.32
5578 5734 0.457851 CACTTGGCAACGGTTCCAAA 59.542 50.000 5.94 0.00 41.35 3.28
5579 5735 0.394488 TCACTTGGCAACGGTTCCAA 60.394 50.000 4.05 4.05 39.81 3.53
5580 5736 0.817634 CTCACTTGGCAACGGTTCCA 60.818 55.000 0.00 0.00 42.51 3.53
5581 5737 0.818040 ACTCACTTGGCAACGGTTCC 60.818 55.000 0.00 0.00 42.51 3.62
5582 5738 0.307760 CACTCACTTGGCAACGGTTC 59.692 55.000 0.00 0.00 42.51 3.62
5583 5739 0.393808 ACACTCACTTGGCAACGGTT 60.394 50.000 0.00 0.00 42.51 4.44
5584 5740 1.095228 CACACTCACTTGGCAACGGT 61.095 55.000 0.00 0.00 42.51 4.83
5585 5741 1.648720 CACACTCACTTGGCAACGG 59.351 57.895 0.00 0.00 42.51 4.44
5586 5742 0.813610 TCCACACTCACTTGGCAACG 60.814 55.000 0.00 0.00 42.51 4.10
5587 5743 0.663153 GTCCACACTCACTTGGCAAC 59.337 55.000 0.00 0.00 32.37 4.17
5588 5744 0.254462 TGTCCACACTCACTTGGCAA 59.746 50.000 0.00 0.00 32.37 4.52
5589 5745 0.254462 TTGTCCACACTCACTTGGCA 59.746 50.000 0.00 0.00 32.37 4.92
5590 5746 1.609208 ATTGTCCACACTCACTTGGC 58.391 50.000 0.00 0.00 32.37 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.