Multiple sequence alignment - TraesCS2A01G276900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G276900 chr2A 100.000 3767 0 0 1 3767 457935584 457939350 0.000000e+00 6957.0
1 TraesCS2A01G276900 chr2A 100.000 342 0 0 4146 4487 457939729 457940070 2.280000e-177 632.0
2 TraesCS2A01G276900 chr2B 95.911 2519 95 3 1026 3537 411498926 411496409 0.000000e+00 4074.0
3 TraesCS2A01G276900 chr2B 89.844 384 26 9 563 939 411502094 411501717 8.730000e-132 481.0
4 TraesCS2A01G276900 chr2D 96.133 2405 85 3 1026 3423 345834278 345831875 0.000000e+00 3919.0
5 TraesCS2A01G276900 chr2D 93.980 299 17 1 3414 3712 345831854 345831557 6.840000e-123 451.0
6 TraesCS2A01G276900 chr2D 82.432 296 20 13 744 1022 345834695 345834415 3.490000e-56 230.0
7 TraesCS2A01G276900 chr2D 90.845 142 13 0 5 146 345835462 345835321 1.650000e-44 191.0
8 TraesCS2A01G276900 chr3B 95.349 86 2 1 4394 4477 441609860 441609945 7.830000e-28 135.0
9 TraesCS2A01G276900 chr7D 90.909 66 5 1 4305 4369 182930843 182930908 2.220000e-13 87.9
10 TraesCS2A01G276900 chr1B 94.231 52 3 0 4312 4363 657498065 657498014 3.720000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G276900 chr2A 457935584 457940070 4486 False 3794.50 6957 100.0000 1 4487 2 chr2A.!!$F1 4486
1 TraesCS2A01G276900 chr2B 411496409 411502094 5685 True 2277.50 4074 92.8775 563 3537 2 chr2B.!!$R1 2974
2 TraesCS2A01G276900 chr2D 345831557 345835462 3905 True 1197.75 3919 90.8475 5 3712 4 chr2D.!!$R1 3707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 637 0.106519 GAGGGCTATGTTGGTGGCAT 60.107 55.0 0.0 0.0 0.0 4.40 F
1099 3908 0.250338 GTCCAGACCTTTCGCCTTGT 60.250 55.0 0.0 0.0 0.0 3.16 F
1815 4630 0.534203 TCGACAGTGTTTTGAGGGCC 60.534 55.0 0.0 0.0 0.0 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 4630 0.460284 ACGCTCCCATCTTTACGCAG 60.460 55.0 0.0 0.0 0.00 5.18 R
1941 4756 0.469705 AAACCAGCAAGGCATCACCA 60.470 50.0 0.0 0.0 43.14 4.17 R
3715 6561 0.179468 GAGGGGCATAACGGCTAACA 59.821 55.0 0.0 0.0 40.90 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.760035 ACGCGAGATGGCCGAAGT 61.760 61.111 15.93 0.00 0.00 3.01
32 33 0.673644 AGATGGCCGAAGTTTCACCG 60.674 55.000 0.00 0.00 0.00 4.94
36 37 1.161563 GGCCGAAGTTTCACCGTGAA 61.162 55.000 9.99 9.99 34.03 3.18
47 48 2.993937 TCACCGTGAAAACTTTCCAGT 58.006 42.857 0.00 0.00 36.36 4.00
81 82 0.392461 TGCGGGCATCAAACTAGACC 60.392 55.000 0.00 0.00 0.00 3.85
85 86 1.282157 GGGCATCAAACTAGACCCACT 59.718 52.381 0.00 0.00 37.30 4.00
146 147 2.703007 CCTAGAGCATGTAAGCCTCCTT 59.297 50.000 0.00 0.00 34.23 3.36
147 148 3.898123 CCTAGAGCATGTAAGCCTCCTTA 59.102 47.826 0.00 0.00 34.23 2.69
150 151 4.230455 AGAGCATGTAAGCCTCCTTAGAT 58.770 43.478 0.00 0.00 37.86 1.98
156 200 5.957771 TGTAAGCCTCCTTAGATGTGATT 57.042 39.130 0.00 0.00 34.35 2.57
158 202 6.817184 TGTAAGCCTCCTTAGATGTGATTAC 58.183 40.000 0.00 0.00 34.35 1.89
161 205 4.835615 AGCCTCCTTAGATGTGATTACGAT 59.164 41.667 0.00 0.00 0.00 3.73
172 216 2.107366 TGATTACGATGGGTGAGCTCA 58.893 47.619 13.74 13.74 0.00 4.26
187 231 2.121963 TCAAGGGTGAGGGGCTGT 60.122 61.111 0.00 0.00 0.00 4.40
190 234 2.895424 AAGGGTGAGGGGCTGTTCG 61.895 63.158 0.00 0.00 0.00 3.95
211 255 2.642254 TAGGACACACGGGGCTTCG 61.642 63.158 0.00 0.00 0.00 3.79
216 260 3.387947 ACACGGGGCTTCGGTAGG 61.388 66.667 0.00 0.00 0.00 3.18
225 269 0.535335 GCTTCGGTAGGACCACATCA 59.465 55.000 0.00 0.00 38.47 3.07
227 271 2.618053 CTTCGGTAGGACCACATCAAC 58.382 52.381 0.00 0.00 38.47 3.18
240 284 2.420022 CACATCAACCTTAGGAAAGCCG 59.580 50.000 4.77 0.00 39.96 5.52
250 294 1.280457 AGGAAAGCCGACAAGGAGAT 58.720 50.000 0.00 0.00 45.00 2.75
251 295 1.630878 AGGAAAGCCGACAAGGAGATT 59.369 47.619 0.00 0.00 45.00 2.40
253 297 2.615493 GGAAAGCCGACAAGGAGATTCA 60.615 50.000 0.00 0.00 45.00 2.57
257 301 1.205893 GCCGACAAGGAGATTCAGAGT 59.794 52.381 0.00 0.00 45.00 3.24
270 314 0.979665 TCAGAGTTTGCTGGAGGAGG 59.020 55.000 0.00 0.00 36.55 4.30
272 316 0.689623 AGAGTTTGCTGGAGGAGGTG 59.310 55.000 0.00 0.00 0.00 4.00
273 317 0.687354 GAGTTTGCTGGAGGAGGTGA 59.313 55.000 0.00 0.00 0.00 4.02
274 318 1.280421 GAGTTTGCTGGAGGAGGTGAT 59.720 52.381 0.00 0.00 0.00 3.06
275 319 1.280421 AGTTTGCTGGAGGAGGTGATC 59.720 52.381 0.00 0.00 0.00 2.92
276 320 0.250234 TTTGCTGGAGGAGGTGATCG 59.750 55.000 0.00 0.00 0.00 3.69
277 321 0.614697 TTGCTGGAGGAGGTGATCGA 60.615 55.000 0.00 0.00 0.00 3.59
278 322 0.397675 TGCTGGAGGAGGTGATCGAT 60.398 55.000 0.00 0.00 0.00 3.59
279 323 0.316841 GCTGGAGGAGGTGATCGATC 59.683 60.000 18.72 18.72 0.00 3.69
280 324 1.697284 CTGGAGGAGGTGATCGATCA 58.303 55.000 23.99 23.99 0.00 2.92
281 325 2.246469 CTGGAGGAGGTGATCGATCAT 58.754 52.381 29.53 16.00 39.30 2.45
298 342 1.003464 TCATGATGTGGTGGTGGTCAG 59.997 52.381 0.00 0.00 0.00 3.51
304 348 3.151906 GGTGGTGGTCAGCAGAGT 58.848 61.111 2.87 0.00 42.97 3.24
327 371 1.993370 GAGAAGACGATTTGGGTGTCG 59.007 52.381 0.00 0.00 43.13 4.35
329 373 0.395312 AAGACGATTTGGGTGTCGGT 59.605 50.000 0.00 0.00 41.87 4.69
330 374 0.320421 AGACGATTTGGGTGTCGGTG 60.320 55.000 0.00 0.00 41.87 4.94
331 375 0.320073 GACGATTTGGGTGTCGGTGA 60.320 55.000 0.00 0.00 41.87 4.02
332 376 0.601841 ACGATTTGGGTGTCGGTGAC 60.602 55.000 0.00 0.00 41.87 3.67
349 394 0.548510 GACTTAGGGCCTCCTGCATT 59.451 55.000 10.74 0.00 44.61 3.56
351 396 0.548031 CTTAGGGCCTCCTGCATTGA 59.452 55.000 10.74 0.00 44.61 2.57
360 405 2.950309 CCTCCTGCATTGATTCCTTCTG 59.050 50.000 0.00 0.00 0.00 3.02
371 416 5.042463 TGATTCCTTCTGTGTGGTTTACA 57.958 39.130 0.00 0.00 36.82 2.41
380 442 1.281656 GTGGTTTACACGCCTGCAC 59.718 57.895 0.00 0.00 40.85 4.57
385 447 1.240641 TTTACACGCCTGCACATGGG 61.241 55.000 0.00 0.00 0.00 4.00
387 449 4.720902 CACGCCTGCACATGGGGA 62.721 66.667 13.60 0.00 40.25 4.81
391 453 1.518774 GCCTGCACATGGGGATTTG 59.481 57.895 0.00 0.00 0.00 2.32
415 481 1.793714 CGTCAAGGTTGTTGTGTGCAC 60.794 52.381 10.75 10.75 0.00 4.57
427 493 1.299850 TGTGCACAAGAGACGACGG 60.300 57.895 19.28 0.00 0.00 4.79
429 495 3.470567 GCACAAGAGACGACGGCG 61.471 66.667 10.39 10.39 44.79 6.46
452 527 3.002246 TGAAACAAGCATCACTCGTGTTC 59.998 43.478 0.00 0.00 35.65 3.18
466 541 6.092396 TCACTCGTGTTCTCTCTATACAAGAC 59.908 42.308 0.00 0.00 0.00 3.01
471 546 6.183360 CGTGTTCTCTCTATACAAGACGAGAA 60.183 42.308 0.00 0.00 41.30 2.87
472 547 7.466185 CGTGTTCTCTCTATACAAGACGAGAAT 60.466 40.741 14.34 0.00 43.08 2.40
488 565 1.006043 AGAATGTGAGAGTCTCGGGGA 59.994 52.381 15.34 0.00 32.35 4.81
494 571 1.354705 TGAGAGTCTCGGGGAAGAAGA 59.645 52.381 15.34 0.00 32.35 2.87
520 597 5.294306 ACGCACAATGATTAGAATCGAATGT 59.706 36.000 0.00 1.00 38.26 2.71
522 599 5.842843 GCACAATGATTAGAATCGAATGTCG 59.157 40.000 0.00 0.00 42.10 4.35
525 602 6.037062 ACAATGATTAGAATCGAATGTCGCAA 59.963 34.615 0.00 0.00 40.21 4.85
535 612 2.699954 GAATGTCGCAAGGAGGAGAAA 58.300 47.619 0.00 0.00 38.47 2.52
536 613 3.274288 GAATGTCGCAAGGAGGAGAAAT 58.726 45.455 0.00 0.00 38.47 2.17
552 629 4.385754 GGAGAAATTGAGGAGGGCTATGTT 60.386 45.833 0.00 0.00 0.00 2.71
555 632 1.668826 TTGAGGAGGGCTATGTTGGT 58.331 50.000 0.00 0.00 0.00 3.67
556 633 0.911769 TGAGGAGGGCTATGTTGGTG 59.088 55.000 0.00 0.00 0.00 4.17
557 634 0.181350 GAGGAGGGCTATGTTGGTGG 59.819 60.000 0.00 0.00 0.00 4.61
558 635 1.453928 GGAGGGCTATGTTGGTGGC 60.454 63.158 0.00 0.00 0.00 5.01
559 636 1.302949 GAGGGCTATGTTGGTGGCA 59.697 57.895 0.00 0.00 0.00 4.92
560 637 0.106519 GAGGGCTATGTTGGTGGCAT 60.107 55.000 0.00 0.00 0.00 4.40
561 638 0.336048 AGGGCTATGTTGGTGGCATT 59.664 50.000 0.00 0.00 0.00 3.56
612 689 1.134401 TGTGCTCCGAGGATGATTTCC 60.134 52.381 0.00 0.00 45.85 3.13
628 705 0.601046 TTCCTGCTCAGTTGCACGAG 60.601 55.000 0.00 0.00 38.12 4.18
659 736 2.863484 TGCAGGGGTGGAATGGGT 60.863 61.111 0.00 0.00 0.00 4.51
709 791 3.810310 AGAGAGGCAAAAGATCTACCG 57.190 47.619 0.00 0.00 0.00 4.02
729 811 0.615331 GGGAGTCAAGCATGAGGTGA 59.385 55.000 0.00 0.00 35.88 4.02
760 842 1.818674 TGCTCGACAACTAGCTGATGA 59.181 47.619 0.00 0.00 39.53 2.92
761 843 2.231235 TGCTCGACAACTAGCTGATGAA 59.769 45.455 0.00 0.00 39.53 2.57
763 845 3.674682 GCTCGACAACTAGCTGATGAAGT 60.675 47.826 0.00 0.00 35.80 3.01
770 852 2.568956 ACTAGCTGATGAAGTTGGAGCA 59.431 45.455 0.00 0.00 31.80 4.26
771 853 2.110901 AGCTGATGAAGTTGGAGCAG 57.889 50.000 0.00 0.00 31.80 4.24
773 855 1.093159 CTGATGAAGTTGGAGCAGGC 58.907 55.000 0.00 0.00 0.00 4.85
779 861 2.371841 TGAAGTTGGAGCAGGCTAGAAA 59.628 45.455 0.00 0.00 0.00 2.52
810 892 0.394192 ATGGACGATGATGTGGCGAT 59.606 50.000 0.00 0.00 0.00 4.58
846 930 3.149436 TGTCAGCACTTCAGCAAAAAC 57.851 42.857 0.00 0.00 36.85 2.43
926 1017 6.874134 CGGTATCAATAATTGAGGGACTAAGG 59.126 42.308 0.00 0.00 43.98 2.69
958 1064 8.080417 GGGTTTTAAAGTTGAGAGACCATTTAC 58.920 37.037 4.34 0.00 0.00 2.01
961 1067 5.924475 AAAGTTGAGAGACCATTTACGTG 57.076 39.130 0.00 0.00 0.00 4.49
962 1068 3.926616 AGTTGAGAGACCATTTACGTGG 58.073 45.455 0.00 0.00 45.04 4.94
963 1069 3.000727 GTTGAGAGACCATTTACGTGGG 58.999 50.000 0.00 0.00 43.77 4.61
964 1070 2.531771 TGAGAGACCATTTACGTGGGA 58.468 47.619 0.00 0.00 43.77 4.37
967 1073 2.100916 AGAGACCATTTACGTGGGATCG 59.899 50.000 0.00 0.00 43.77 3.69
1013 1130 4.175787 TCTTGAGAGAAGAAGTTACGCC 57.824 45.455 0.00 0.00 0.00 5.68
1029 3838 4.124351 CCCGCACGGCTAACTCGA 62.124 66.667 2.83 0.00 0.00 4.04
1054 3863 4.729918 CAGCGCCCTCCAAGCCTT 62.730 66.667 2.29 0.00 0.00 4.35
1055 3864 3.009115 AGCGCCCTCCAAGCCTTA 61.009 61.111 2.29 0.00 0.00 2.69
1066 3875 1.202428 CCAAGCCTTAGCGAGACTACC 60.202 57.143 0.00 0.00 46.67 3.18
1077 3886 0.317436 GAGACTACCGCATGCTCTCG 60.317 60.000 17.13 4.30 0.00 4.04
1099 3908 0.250338 GTCCAGACCTTTCGCCTTGT 60.250 55.000 0.00 0.00 0.00 3.16
1113 3922 1.230635 CCTTGTGCAGACCAAGACCG 61.231 60.000 15.16 0.00 41.44 4.79
1186 4001 1.080093 GAAGATGCGTCCGTCACCA 60.080 57.895 1.23 0.00 0.00 4.17
1206 4021 2.037136 GCAGAACATGCGGCTCACT 61.037 57.895 0.00 0.00 46.99 3.41
1299 4114 4.321966 TGGAACGCCATGGTCGCA 62.322 61.111 22.90 13.30 39.92 5.10
1503 4318 2.266055 GTCGTGGGGCCTTCTCTG 59.734 66.667 0.84 0.00 0.00 3.35
1527 4342 2.095161 CGACTTCTACTCCTCGTGCTTT 60.095 50.000 0.00 0.00 0.00 3.51
1557 4372 1.543614 CATCTCACACGCTCTTCGAG 58.456 55.000 0.00 0.00 41.67 4.04
1761 4576 7.753132 GCGATTTGGTTATTTGTTCAGATGTTA 59.247 33.333 0.00 0.00 0.00 2.41
1764 4579 7.759489 TTGGTTATTTGTTCAGATGTTAGCT 57.241 32.000 0.00 0.00 0.00 3.32
1815 4630 0.534203 TCGACAGTGTTTTGAGGGCC 60.534 55.000 0.00 0.00 0.00 5.80
1851 4666 1.405463 GCGTTGGATTTTGGGAGATCC 59.595 52.381 0.00 0.00 41.78 3.36
2342 5157 6.149474 TCAGAAGCTCTAAAACTATTTGTGGC 59.851 38.462 0.00 0.00 0.00 5.01
2418 5233 0.820891 CCTGTGCTGCTGTTGGAACT 60.821 55.000 0.00 0.00 0.00 3.01
2484 5299 6.513180 TCCATTCGAGTCCAATAGTTATGTC 58.487 40.000 0.00 0.00 0.00 3.06
2559 5374 0.235144 GCGCATTTTGTTGCATTGCA 59.765 45.000 7.38 7.38 42.91 4.08
2676 5491 6.433093 TGAAGCATCATATCAATCCCAATGAG 59.567 38.462 0.00 0.00 32.25 2.90
2781 5596 4.402793 AGCTATGGACTAGTACCAACTGTG 59.597 45.833 15.22 7.56 40.93 3.66
2826 5641 3.054503 CTCGGTCGGACTGGACGT 61.055 66.667 16.54 0.00 37.82 4.34
2865 5680 4.008330 AGTTCATCTCTGAAATGCCTGTG 58.992 43.478 0.00 0.00 42.85 3.66
2877 5692 1.266867 TGCCTGTGCCAGCAGATAGA 61.267 55.000 0.00 0.00 38.70 1.98
2893 5708 0.941963 TAGAGTGGTATGGGGAGCCT 59.058 55.000 0.00 0.00 0.00 4.58
2916 5731 0.108186 TCACTGCCTGCTGGTATTCG 60.108 55.000 11.69 0.00 35.27 3.34
3246 6061 8.870075 AAGATTTATATTGGTTATCTGGAGCC 57.130 34.615 0.00 0.00 0.00 4.70
3309 6124 4.202030 CGATAGGTTAGAGGACTGTGTTCC 60.202 50.000 0.00 0.00 35.66 3.62
3341 6157 1.002315 GCACCAATTTGATGGCCAAGT 59.998 47.619 10.96 0.00 44.75 3.16
3353 6169 1.075374 TGGCCAAGTACCTTGAATGCT 59.925 47.619 0.61 0.00 43.42 3.79
3357 6173 4.199310 GCCAAGTACCTTGAATGCTCATA 58.801 43.478 5.57 0.00 43.42 2.15
3359 6175 5.049129 GCCAAGTACCTTGAATGCTCATATC 60.049 44.000 5.57 0.00 43.42 1.63
3374 6190 5.756833 TGCTCATATCTGACAACATTGCTAG 59.243 40.000 0.00 0.00 0.00 3.42
3385 6201 9.121517 CTGACAACATTGCTAGTGATTTTAAAG 57.878 33.333 0.00 0.00 0.00 1.85
3386 6202 8.845227 TGACAACATTGCTAGTGATTTTAAAGA 58.155 29.630 0.00 0.00 0.00 2.52
3387 6203 9.118236 GACAACATTGCTAGTGATTTTAAAGAC 57.882 33.333 0.00 0.00 0.00 3.01
3393 6209 7.004555 TGCTAGTGATTTTAAAGACTCCTGA 57.995 36.000 0.00 0.00 0.00 3.86
3399 6215 9.965902 AGTGATTTTAAAGACTCCTGAATGTAT 57.034 29.630 0.00 0.00 0.00 2.29
3502 6348 9.533831 ACCTTTCTAATTTGGTCATACTTCAAT 57.466 29.630 0.00 0.00 0.00 2.57
3589 6435 6.317789 TGGACTCAGATCAAATTGTGTTTC 57.682 37.500 0.00 0.00 0.00 2.78
3595 6441 7.387673 ACTCAGATCAAATTGTGTTTCGATGTA 59.612 33.333 0.00 0.00 0.00 2.29
3599 6445 9.743057 AGATCAAATTGTGTTTCGATGTAAAAA 57.257 25.926 0.00 0.00 0.00 1.94
3630 6476 9.420551 CTTACGATACCCTATAAAACCAGATTC 57.579 37.037 0.00 0.00 0.00 2.52
3631 6477 7.369551 ACGATACCCTATAAAACCAGATTCA 57.630 36.000 0.00 0.00 0.00 2.57
3671 6517 6.314648 CGGAAACTATCCTAACCACTTTAACC 59.685 42.308 0.00 0.00 46.98 2.85
3680 6526 2.525368 ACCACTTTAACCATTGGAGGC 58.475 47.619 10.37 0.00 33.02 4.70
3703 6549 3.859443 ACAATGAGATCTGAGCACACTC 58.141 45.455 0.00 0.00 43.76 3.51
3705 6551 0.813821 TGAGATCTGAGCACACTCCG 59.186 55.000 0.00 0.00 42.74 4.63
3712 6558 1.005630 GAGCACACTCCGCAGTCTT 60.006 57.895 0.00 0.00 36.90 3.01
3713 6559 1.005630 AGCACACTCCGCAGTCTTC 60.006 57.895 0.00 0.00 0.00 2.87
3714 6560 1.300931 GCACACTCCGCAGTCTTCA 60.301 57.895 0.00 0.00 0.00 3.02
3715 6561 0.671781 GCACACTCCGCAGTCTTCAT 60.672 55.000 0.00 0.00 0.00 2.57
3716 6562 1.073964 CACACTCCGCAGTCTTCATG 58.926 55.000 0.00 0.00 0.00 3.07
3717 6563 0.681733 ACACTCCGCAGTCTTCATGT 59.318 50.000 0.00 0.00 0.00 3.21
3718 6564 1.070758 ACACTCCGCAGTCTTCATGTT 59.929 47.619 0.00 0.00 0.00 2.71
3719 6565 2.299013 ACACTCCGCAGTCTTCATGTTA 59.701 45.455 0.00 0.00 0.00 2.41
3720 6566 2.926200 CACTCCGCAGTCTTCATGTTAG 59.074 50.000 0.00 0.00 0.00 2.34
3721 6567 1.929836 CTCCGCAGTCTTCATGTTAGC 59.070 52.381 0.00 0.00 0.00 3.09
3722 6568 1.009829 CCGCAGTCTTCATGTTAGCC 58.990 55.000 0.00 0.00 0.00 3.93
3723 6569 0.647410 CGCAGTCTTCATGTTAGCCG 59.353 55.000 0.00 0.00 0.00 5.52
3724 6570 1.726853 GCAGTCTTCATGTTAGCCGT 58.273 50.000 0.00 0.00 0.00 5.68
3725 6571 2.076863 GCAGTCTTCATGTTAGCCGTT 58.923 47.619 0.00 0.00 0.00 4.44
3726 6572 3.259064 GCAGTCTTCATGTTAGCCGTTA 58.741 45.455 0.00 0.00 0.00 3.18
3727 6573 3.871594 GCAGTCTTCATGTTAGCCGTTAT 59.128 43.478 0.00 0.00 0.00 1.89
3728 6574 4.260375 GCAGTCTTCATGTTAGCCGTTATG 60.260 45.833 0.00 0.00 0.00 1.90
3729 6575 3.871594 AGTCTTCATGTTAGCCGTTATGC 59.128 43.478 0.00 0.00 0.00 3.14
3730 6576 3.002348 GTCTTCATGTTAGCCGTTATGCC 59.998 47.826 0.00 0.00 0.00 4.40
3731 6577 1.961793 TCATGTTAGCCGTTATGCCC 58.038 50.000 0.00 0.00 0.00 5.36
3732 6578 0.951558 CATGTTAGCCGTTATGCCCC 59.048 55.000 0.00 0.00 0.00 5.80
3733 6579 0.843984 ATGTTAGCCGTTATGCCCCT 59.156 50.000 0.00 0.00 0.00 4.79
3734 6580 0.179468 TGTTAGCCGTTATGCCCCTC 59.821 55.000 0.00 0.00 0.00 4.30
3735 6581 0.179468 GTTAGCCGTTATGCCCCTCA 59.821 55.000 0.00 0.00 0.00 3.86
3736 6582 0.179468 TTAGCCGTTATGCCCCTCAC 59.821 55.000 0.00 0.00 0.00 3.51
3737 6583 1.692173 TAGCCGTTATGCCCCTCACC 61.692 60.000 0.00 0.00 0.00 4.02
3738 6584 2.192175 CCGTTATGCCCCTCACCC 59.808 66.667 0.00 0.00 0.00 4.61
3739 6585 2.192175 CGTTATGCCCCTCACCCC 59.808 66.667 0.00 0.00 0.00 4.95
3740 6586 2.375345 CGTTATGCCCCTCACCCCT 61.375 63.158 0.00 0.00 0.00 4.79
3741 6587 1.532238 GTTATGCCCCTCACCCCTC 59.468 63.158 0.00 0.00 0.00 4.30
3742 6588 1.696314 TTATGCCCCTCACCCCTCC 60.696 63.158 0.00 0.00 0.00 4.30
3743 6589 3.731886 TATGCCCCTCACCCCTCCC 62.732 68.421 0.00 0.00 0.00 4.30
3749 6595 4.075793 CTCACCCCTCCCCCGAGA 62.076 72.222 0.00 0.00 38.52 4.04
3750 6596 4.393778 TCACCCCTCCCCCGAGAC 62.394 72.222 0.00 0.00 38.52 3.36
3753 6599 4.541648 CCCCTCCCCCGAGACGAT 62.542 72.222 0.00 0.00 38.52 3.73
3754 6600 2.444140 CCCTCCCCCGAGACGATT 60.444 66.667 0.00 0.00 38.52 3.34
3755 6601 2.064581 CCCTCCCCCGAGACGATTT 61.065 63.158 0.00 0.00 38.52 2.17
3756 6602 1.623542 CCCTCCCCCGAGACGATTTT 61.624 60.000 0.00 0.00 38.52 1.82
3757 6603 0.252197 CCTCCCCCGAGACGATTTTT 59.748 55.000 0.00 0.00 38.52 1.94
3758 6604 1.369625 CTCCCCCGAGACGATTTTTG 58.630 55.000 0.00 0.00 38.52 2.44
3759 6605 0.675522 TCCCCCGAGACGATTTTTGC 60.676 55.000 0.00 0.00 0.00 3.68
3760 6606 1.423845 CCCCGAGACGATTTTTGCG 59.576 57.895 0.00 0.00 0.00 4.85
3761 6607 1.226018 CCCGAGACGATTTTTGCGC 60.226 57.895 0.00 0.00 0.00 6.09
3762 6608 1.226018 CCGAGACGATTTTTGCGCC 60.226 57.895 4.18 0.00 0.00 6.53
3763 6609 1.495509 CGAGACGATTTTTGCGCCA 59.504 52.632 4.18 0.00 0.00 5.69
3764 6610 0.519175 CGAGACGATTTTTGCGCCAG 60.519 55.000 4.18 0.00 0.00 4.85
3765 6611 0.796312 GAGACGATTTTTGCGCCAGA 59.204 50.000 4.18 0.00 0.00 3.86
3766 6612 1.398390 GAGACGATTTTTGCGCCAGAT 59.602 47.619 4.18 0.00 0.00 2.90
4162 7008 4.812814 GGCGCTAATTTTGCTGGG 57.187 55.556 7.64 0.00 0.00 4.45
4163 7009 1.890174 GGCGCTAATTTTGCTGGGT 59.110 52.632 7.64 0.00 0.00 4.51
4164 7010 0.458370 GGCGCTAATTTTGCTGGGTG 60.458 55.000 7.64 0.00 0.00 4.61
4165 7011 0.458370 GCGCTAATTTTGCTGGGTGG 60.458 55.000 0.00 0.00 0.00 4.61
4166 7012 0.173255 CGCTAATTTTGCTGGGTGGG 59.827 55.000 1.56 0.00 0.00 4.61
4167 7013 1.266178 GCTAATTTTGCTGGGTGGGT 58.734 50.000 0.00 0.00 0.00 4.51
4168 7014 1.066929 GCTAATTTTGCTGGGTGGGTG 60.067 52.381 0.00 0.00 0.00 4.61
4169 7015 2.524306 CTAATTTTGCTGGGTGGGTGA 58.476 47.619 0.00 0.00 0.00 4.02
4170 7016 1.341080 AATTTTGCTGGGTGGGTGAG 58.659 50.000 0.00 0.00 0.00 3.51
4171 7017 0.542702 ATTTTGCTGGGTGGGTGAGG 60.543 55.000 0.00 0.00 0.00 3.86
4172 7018 2.655077 TTTTGCTGGGTGGGTGAGGG 62.655 60.000 0.00 0.00 0.00 4.30
4194 7040 4.735358 GGTGGGGCGGGGAGTTTC 62.735 72.222 0.00 0.00 0.00 2.78
4195 7041 4.735358 GTGGGGCGGGGAGTTTCC 62.735 72.222 0.00 0.00 35.23 3.13
4207 7053 2.701107 GGAGTTTCCCAGTAGTTGAGC 58.299 52.381 0.00 0.00 0.00 4.26
4208 7054 2.615747 GGAGTTTCCCAGTAGTTGAGCC 60.616 54.545 0.00 0.00 0.00 4.70
4209 7055 1.351350 AGTTTCCCAGTAGTTGAGCCC 59.649 52.381 0.00 0.00 0.00 5.19
4210 7056 0.696501 TTTCCCAGTAGTTGAGCCCC 59.303 55.000 0.00 0.00 0.00 5.80
4211 7057 1.205460 TTCCCAGTAGTTGAGCCCCC 61.205 60.000 0.00 0.00 0.00 5.40
4212 7058 1.923395 CCCAGTAGTTGAGCCCCCA 60.923 63.158 0.00 0.00 0.00 4.96
4213 7059 1.604378 CCAGTAGTTGAGCCCCCAG 59.396 63.158 0.00 0.00 0.00 4.45
4214 7060 1.604378 CAGTAGTTGAGCCCCCAGG 59.396 63.158 0.00 0.00 0.00 4.45
4231 7077 4.374702 GCGTTCTGCACAGGCGTG 62.375 66.667 4.53 4.53 46.56 5.34
4232 7078 3.716006 CGTTCTGCACAGGCGTGG 61.716 66.667 11.67 1.04 43.81 4.94
4233 7079 3.357079 GTTCTGCACAGGCGTGGG 61.357 66.667 11.67 7.99 43.81 4.61
4234 7080 3.555324 TTCTGCACAGGCGTGGGA 61.555 61.111 13.96 0.84 43.81 4.37
4235 7081 3.535629 TTCTGCACAGGCGTGGGAG 62.536 63.158 13.96 10.99 43.81 4.30
4236 7082 4.320456 CTGCACAGGCGTGGGAGT 62.320 66.667 13.96 0.00 43.81 3.85
4237 7083 3.832237 CTGCACAGGCGTGGGAGTT 62.832 63.158 13.96 0.00 43.81 3.01
4238 7084 3.357079 GCACAGGCGTGGGAGTTG 61.357 66.667 13.96 0.92 43.81 3.16
4239 7085 2.669569 CACAGGCGTGGGAGTTGG 60.670 66.667 11.67 0.00 39.64 3.77
4240 7086 3.168528 ACAGGCGTGGGAGTTGGT 61.169 61.111 11.67 0.00 0.00 3.67
4241 7087 2.669569 CAGGCGTGGGAGTTGGTG 60.670 66.667 0.00 0.00 0.00 4.17
4242 7088 3.953775 AGGCGTGGGAGTTGGTGG 61.954 66.667 0.00 0.00 0.00 4.61
4245 7091 4.263572 CGTGGGAGTTGGTGGGCA 62.264 66.667 0.00 0.00 0.00 5.36
4246 7092 2.197324 GTGGGAGTTGGTGGGCAA 59.803 61.111 0.00 0.00 0.00 4.52
4247 7093 1.903404 GTGGGAGTTGGTGGGCAAG 60.903 63.158 0.00 0.00 0.00 4.01
4248 7094 2.081787 TGGGAGTTGGTGGGCAAGA 61.082 57.895 0.00 0.00 0.00 3.02
4249 7095 1.303643 GGGAGTTGGTGGGCAAGAG 60.304 63.158 0.00 0.00 0.00 2.85
4250 7096 1.761174 GGAGTTGGTGGGCAAGAGA 59.239 57.895 0.00 0.00 0.00 3.10
4251 7097 0.110486 GGAGTTGGTGGGCAAGAGAA 59.890 55.000 0.00 0.00 0.00 2.87
4252 7098 1.528129 GAGTTGGTGGGCAAGAGAAG 58.472 55.000 0.00 0.00 0.00 2.85
4253 7099 0.111253 AGTTGGTGGGCAAGAGAAGG 59.889 55.000 0.00 0.00 0.00 3.46
4254 7100 0.110486 GTTGGTGGGCAAGAGAAGGA 59.890 55.000 0.00 0.00 0.00 3.36
4255 7101 0.401738 TTGGTGGGCAAGAGAAGGAG 59.598 55.000 0.00 0.00 0.00 3.69
4256 7102 0.473694 TGGTGGGCAAGAGAAGGAGA 60.474 55.000 0.00 0.00 0.00 3.71
4257 7103 0.693049 GGTGGGCAAGAGAAGGAGAA 59.307 55.000 0.00 0.00 0.00 2.87
4258 7104 1.339535 GGTGGGCAAGAGAAGGAGAAG 60.340 57.143 0.00 0.00 0.00 2.85
4259 7105 1.625818 GTGGGCAAGAGAAGGAGAAGA 59.374 52.381 0.00 0.00 0.00 2.87
4260 7106 1.625818 TGGGCAAGAGAAGGAGAAGAC 59.374 52.381 0.00 0.00 0.00 3.01
4261 7107 1.905894 GGGCAAGAGAAGGAGAAGACT 59.094 52.381 0.00 0.00 0.00 3.24
4262 7108 2.304470 GGGCAAGAGAAGGAGAAGACTT 59.696 50.000 0.00 0.00 0.00 3.01
4263 7109 3.595173 GGCAAGAGAAGGAGAAGACTTC 58.405 50.000 7.14 7.14 43.56 3.01
4264 7110 3.007398 GGCAAGAGAAGGAGAAGACTTCA 59.993 47.826 17.34 0.00 45.18 3.02
4265 7111 4.323409 GGCAAGAGAAGGAGAAGACTTCAT 60.323 45.833 17.34 2.70 45.18 2.57
4266 7112 4.630940 GCAAGAGAAGGAGAAGACTTCATG 59.369 45.833 17.34 0.00 45.18 3.07
4267 7113 5.792741 CAAGAGAAGGAGAAGACTTCATGT 58.207 41.667 17.34 0.00 45.18 3.21
4268 7114 6.229733 CAAGAGAAGGAGAAGACTTCATGTT 58.770 40.000 17.34 6.79 45.18 2.71
4269 7115 7.382110 CAAGAGAAGGAGAAGACTTCATGTTA 58.618 38.462 17.34 0.00 45.18 2.41
4270 7116 7.169158 AGAGAAGGAGAAGACTTCATGTTAG 57.831 40.000 17.34 0.00 45.18 2.34
4271 7117 6.951198 AGAGAAGGAGAAGACTTCATGTTAGA 59.049 38.462 17.34 0.00 45.18 2.10
4272 7118 7.122650 AGAGAAGGAGAAGACTTCATGTTAGAG 59.877 40.741 17.34 0.00 45.18 2.43
4273 7119 5.337578 AGGAGAAGACTTCATGTTAGAGC 57.662 43.478 17.34 0.00 0.00 4.09
4274 7120 4.774726 AGGAGAAGACTTCATGTTAGAGCA 59.225 41.667 17.34 0.00 0.00 4.26
4275 7121 5.424895 AGGAGAAGACTTCATGTTAGAGCAT 59.575 40.000 17.34 0.00 0.00 3.79
4276 7122 5.752955 GGAGAAGACTTCATGTTAGAGCATC 59.247 44.000 17.34 1.66 0.00 3.91
4288 7134 3.997672 GAGCATCTCCAGCCGTTAT 57.002 52.632 0.00 0.00 0.00 1.89
4289 7135 1.506493 GAGCATCTCCAGCCGTTATG 58.494 55.000 0.00 0.00 0.00 1.90
4290 7136 0.533755 AGCATCTCCAGCCGTTATGC 60.534 55.000 0.00 0.00 42.52 3.14
4291 7137 1.510480 GCATCTCCAGCCGTTATGCC 61.510 60.000 0.00 0.00 37.55 4.40
4292 7138 0.886490 CATCTCCAGCCGTTATGCCC 60.886 60.000 0.00 0.00 0.00 5.36
4293 7139 2.056906 ATCTCCAGCCGTTATGCCCC 62.057 60.000 0.00 0.00 0.00 5.80
4294 7140 2.690881 TCCAGCCGTTATGCCCCT 60.691 61.111 0.00 0.00 0.00 4.79
4295 7141 2.203209 CCAGCCGTTATGCCCCTC 60.203 66.667 0.00 0.00 0.00 4.30
4296 7142 2.589540 CAGCCGTTATGCCCCTCA 59.410 61.111 0.00 0.00 0.00 3.86
4297 7143 1.819632 CAGCCGTTATGCCCCTCAC 60.820 63.158 0.00 0.00 0.00 3.51
4298 7144 2.516225 GCCGTTATGCCCCTCACC 60.516 66.667 0.00 0.00 0.00 4.02
4299 7145 2.192175 CCGTTATGCCCCTCACCC 59.808 66.667 0.00 0.00 0.00 4.61
4300 7146 2.192175 CGTTATGCCCCTCACCCC 59.808 66.667 0.00 0.00 0.00 4.95
4301 7147 2.601299 GTTATGCCCCTCACCCCC 59.399 66.667 0.00 0.00 0.00 5.40
4315 7161 4.075793 CCCCCTCCCCTGAGACGA 62.076 72.222 0.00 0.00 41.42 4.20
4316 7162 2.283809 CCCCTCCCCTGAGACGAT 59.716 66.667 0.00 0.00 41.42 3.73
4317 7163 1.383248 CCCCTCCCCTGAGACGATT 60.383 63.158 0.00 0.00 41.42 3.34
4318 7164 0.983378 CCCCTCCCCTGAGACGATTT 60.983 60.000 0.00 0.00 41.42 2.17
4319 7165 0.912486 CCCTCCCCTGAGACGATTTT 59.088 55.000 0.00 0.00 41.42 1.82
4320 7166 1.282157 CCCTCCCCTGAGACGATTTTT 59.718 52.381 0.00 0.00 41.42 1.94
4321 7167 2.359900 CCTCCCCTGAGACGATTTTTG 58.640 52.381 0.00 0.00 41.42 2.44
4322 7168 1.740025 CTCCCCTGAGACGATTTTTGC 59.260 52.381 0.00 0.00 41.42 3.68
4323 7169 0.447801 CCCCTGAGACGATTTTTGCG 59.552 55.000 0.00 0.00 0.00 4.85
4324 7170 0.179189 CCCTGAGACGATTTTTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
4325 7171 0.179189 CCTGAGACGATTTTTGCGCC 60.179 55.000 4.18 0.00 0.00 6.53
4326 7172 0.516877 CTGAGACGATTTTTGCGCCA 59.483 50.000 4.18 0.00 0.00 5.69
4327 7173 0.516877 TGAGACGATTTTTGCGCCAG 59.483 50.000 4.18 0.00 0.00 4.85
4328 7174 0.796312 GAGACGATTTTTGCGCCAGA 59.204 50.000 4.18 0.00 0.00 3.86
4329 7175 1.398390 GAGACGATTTTTGCGCCAGAT 59.602 47.619 4.18 0.00 0.00 2.90
4330 7176 1.131126 AGACGATTTTTGCGCCAGATG 59.869 47.619 4.18 0.00 0.00 2.90
4331 7177 1.130373 GACGATTTTTGCGCCAGATGA 59.870 47.619 4.18 0.00 0.00 2.92
4332 7178 1.539388 ACGATTTTTGCGCCAGATGAA 59.461 42.857 4.18 0.00 0.00 2.57
4333 7179 2.179589 CGATTTTTGCGCCAGATGAAG 58.820 47.619 4.18 0.00 0.00 3.02
4334 7180 2.159531 CGATTTTTGCGCCAGATGAAGA 60.160 45.455 4.18 0.00 0.00 2.87
4335 7181 3.488047 CGATTTTTGCGCCAGATGAAGAT 60.488 43.478 4.18 0.00 0.00 2.40
4336 7182 3.940209 TTTTTGCGCCAGATGAAGATT 57.060 38.095 4.18 0.00 0.00 2.40
4337 7183 3.940209 TTTTGCGCCAGATGAAGATTT 57.060 38.095 4.18 0.00 0.00 2.17
4338 7184 2.925578 TTGCGCCAGATGAAGATTTG 57.074 45.000 4.18 0.00 0.00 2.32
4339 7185 0.452987 TGCGCCAGATGAAGATTTGC 59.547 50.000 4.18 0.00 0.00 3.68
4340 7186 0.248784 GCGCCAGATGAAGATTTGCC 60.249 55.000 0.00 0.00 0.00 4.52
4341 7187 0.028505 CGCCAGATGAAGATTTGCCG 59.971 55.000 0.00 0.00 0.00 5.69
4342 7188 0.383231 GCCAGATGAAGATTTGCCGG 59.617 55.000 0.00 0.00 0.00 6.13
4343 7189 0.383231 CCAGATGAAGATTTGCCGGC 59.617 55.000 22.73 22.73 0.00 6.13
4344 7190 0.028505 CAGATGAAGATTTGCCGGCG 59.971 55.000 23.90 0.00 0.00 6.46
4345 7191 1.298638 GATGAAGATTTGCCGGCGC 60.299 57.895 23.90 11.21 0.00 6.53
4346 7192 1.718757 GATGAAGATTTGCCGGCGCT 61.719 55.000 23.90 13.51 35.36 5.92
4347 7193 0.463654 ATGAAGATTTGCCGGCGCTA 60.464 50.000 23.90 9.93 35.36 4.26
4348 7194 0.675208 TGAAGATTTGCCGGCGCTAA 60.675 50.000 23.90 16.23 34.22 3.09
4349 7195 0.663153 GAAGATTTGCCGGCGCTAAT 59.337 50.000 23.90 20.30 42.12 1.73
4350 7196 1.065551 GAAGATTTGCCGGCGCTAATT 59.934 47.619 23.90 13.89 39.98 1.40
4351 7197 1.102978 AGATTTGCCGGCGCTAATTT 58.897 45.000 23.90 13.29 39.98 1.82
4352 7198 1.476488 AGATTTGCCGGCGCTAATTTT 59.524 42.857 23.90 10.59 39.98 1.82
4353 7199 1.587946 GATTTGCCGGCGCTAATTTTG 59.412 47.619 23.90 0.00 39.98 2.44
4354 7200 1.011451 TTTGCCGGCGCTAATTTTGC 61.011 50.000 23.90 0.00 35.36 3.68
4355 7201 1.872197 TTGCCGGCGCTAATTTTGCT 61.872 50.000 23.90 0.00 35.36 3.91
4356 7202 1.873572 GCCGGCGCTAATTTTGCTG 60.874 57.895 12.58 0.00 34.77 4.41
4357 7203 4.382728 CGGCGCTAATTTTGCTGG 57.617 55.556 7.64 0.00 0.00 4.85
4358 7204 1.226660 CGGCGCTAATTTTGCTGGG 60.227 57.895 7.64 0.00 0.00 4.45
4359 7205 1.890174 GGCGCTAATTTTGCTGGGT 59.110 52.632 7.64 0.00 0.00 4.51
4360 7206 0.458370 GGCGCTAATTTTGCTGGGTG 60.458 55.000 7.64 0.00 0.00 4.61
4361 7207 0.458370 GCGCTAATTTTGCTGGGTGG 60.458 55.000 0.00 0.00 0.00 4.61
4362 7208 0.173255 CGCTAATTTTGCTGGGTGGG 59.827 55.000 1.56 0.00 0.00 4.61
4363 7209 1.266178 GCTAATTTTGCTGGGTGGGT 58.734 50.000 0.00 0.00 0.00 4.51
4364 7210 1.066929 GCTAATTTTGCTGGGTGGGTG 60.067 52.381 0.00 0.00 0.00 4.61
4365 7211 1.550072 CTAATTTTGCTGGGTGGGTGG 59.450 52.381 0.00 0.00 0.00 4.61
4366 7212 1.126948 AATTTTGCTGGGTGGGTGGG 61.127 55.000 0.00 0.00 0.00 4.61
4367 7213 3.765257 TTTTGCTGGGTGGGTGGGG 62.765 63.158 0.00 0.00 0.00 4.96
4385 7231 3.909651 GGTGGGGGCAGTTTGGGA 61.910 66.667 0.00 0.00 0.00 4.37
4386 7232 2.283173 GTGGGGGCAGTTTGGGAG 60.283 66.667 0.00 0.00 0.00 4.30
4387 7233 2.780924 TGGGGGCAGTTTGGGAGT 60.781 61.111 0.00 0.00 0.00 3.85
4388 7234 2.399607 TGGGGGCAGTTTGGGAGTT 61.400 57.895 0.00 0.00 0.00 3.01
4389 7235 1.908299 GGGGGCAGTTTGGGAGTTG 60.908 63.158 0.00 0.00 0.00 3.16
4390 7236 1.908299 GGGGCAGTTTGGGAGTTGG 60.908 63.158 0.00 0.00 0.00 3.77
4391 7237 1.152546 GGGCAGTTTGGGAGTTGGT 60.153 57.895 0.00 0.00 0.00 3.67
4392 7238 1.463553 GGGCAGTTTGGGAGTTGGTG 61.464 60.000 0.00 0.00 0.00 4.17
4393 7239 1.363807 GCAGTTTGGGAGTTGGTGC 59.636 57.895 0.00 0.00 0.00 5.01
4394 7240 1.654220 CAGTTTGGGAGTTGGTGCG 59.346 57.895 0.00 0.00 0.00 5.34
4395 7241 1.101049 CAGTTTGGGAGTTGGTGCGT 61.101 55.000 0.00 0.00 0.00 5.24
4396 7242 1.101049 AGTTTGGGAGTTGGTGCGTG 61.101 55.000 0.00 0.00 0.00 5.34
4397 7243 1.826054 TTTGGGAGTTGGTGCGTGG 60.826 57.895 0.00 0.00 0.00 4.94
4398 7244 3.783362 TTGGGAGTTGGTGCGTGGG 62.783 63.158 0.00 0.00 0.00 4.61
4399 7245 4.265056 GGGAGTTGGTGCGTGGGT 62.265 66.667 0.00 0.00 0.00 4.51
4400 7246 2.978010 GGAGTTGGTGCGTGGGTG 60.978 66.667 0.00 0.00 0.00 4.61
4401 7247 2.978010 GAGTTGGTGCGTGGGTGG 60.978 66.667 0.00 0.00 0.00 4.61
4402 7248 4.579384 AGTTGGTGCGTGGGTGGG 62.579 66.667 0.00 0.00 0.00 4.61
4425 7271 2.663826 CGGAGGAAAAGTGAGGAGAG 57.336 55.000 0.00 0.00 0.00 3.20
4426 7272 2.171840 CGGAGGAAAAGTGAGGAGAGA 58.828 52.381 0.00 0.00 0.00 3.10
4427 7273 2.165437 CGGAGGAAAAGTGAGGAGAGAG 59.835 54.545 0.00 0.00 0.00 3.20
4428 7274 3.436243 GGAGGAAAAGTGAGGAGAGAGA 58.564 50.000 0.00 0.00 0.00 3.10
4429 7275 3.447229 GGAGGAAAAGTGAGGAGAGAGAG 59.553 52.174 0.00 0.00 0.00 3.20
4430 7276 4.340617 GAGGAAAAGTGAGGAGAGAGAGA 58.659 47.826 0.00 0.00 0.00 3.10
4431 7277 4.344104 AGGAAAAGTGAGGAGAGAGAGAG 58.656 47.826 0.00 0.00 0.00 3.20
4432 7278 4.086457 GGAAAAGTGAGGAGAGAGAGAGT 58.914 47.826 0.00 0.00 0.00 3.24
4433 7279 4.082245 GGAAAAGTGAGGAGAGAGAGAGTG 60.082 50.000 0.00 0.00 0.00 3.51
4434 7280 2.806945 AGTGAGGAGAGAGAGAGTGG 57.193 55.000 0.00 0.00 0.00 4.00
4435 7281 1.284785 AGTGAGGAGAGAGAGAGTGGG 59.715 57.143 0.00 0.00 0.00 4.61
4436 7282 1.283613 GTGAGGAGAGAGAGAGTGGGA 59.716 57.143 0.00 0.00 0.00 4.37
4437 7283 1.563879 TGAGGAGAGAGAGAGTGGGAG 59.436 57.143 0.00 0.00 0.00 4.30
4438 7284 0.926293 AGGAGAGAGAGAGTGGGAGG 59.074 60.000 0.00 0.00 0.00 4.30
4439 7285 0.755327 GGAGAGAGAGAGTGGGAGGC 60.755 65.000 0.00 0.00 0.00 4.70
4440 7286 0.258774 GAGAGAGAGAGTGGGAGGCT 59.741 60.000 0.00 0.00 0.00 4.58
4441 7287 0.033208 AGAGAGAGAGTGGGAGGCTG 60.033 60.000 0.00 0.00 0.00 4.85
4442 7288 0.033601 GAGAGAGAGTGGGAGGCTGA 60.034 60.000 0.00 0.00 0.00 4.26
4443 7289 0.324275 AGAGAGAGTGGGAGGCTGAC 60.324 60.000 0.00 0.00 0.00 3.51
4444 7290 1.662438 GAGAGAGTGGGAGGCTGACG 61.662 65.000 0.00 0.00 0.00 4.35
4445 7291 2.681778 AGAGTGGGAGGCTGACGG 60.682 66.667 0.00 0.00 0.00 4.79
4446 7292 2.997897 GAGTGGGAGGCTGACGGT 60.998 66.667 0.00 0.00 0.00 4.83
4447 7293 2.997897 AGTGGGAGGCTGACGGTC 60.998 66.667 0.00 0.00 0.00 4.79
4448 7294 4.436998 GTGGGAGGCTGACGGTCG 62.437 72.222 3.34 0.00 0.00 4.79
4451 7297 4.131088 GGAGGCTGACGGTCGGTC 62.131 72.222 13.61 13.61 46.27 4.79
4459 7305 3.204505 GACGGTCGGTCAAATGACA 57.795 52.632 14.93 0.00 46.47 3.58
4460 7306 1.722011 GACGGTCGGTCAAATGACAT 58.278 50.000 14.93 0.00 46.47 3.06
4461 7307 1.393539 GACGGTCGGTCAAATGACATG 59.606 52.381 14.93 7.19 46.47 3.21
4462 7308 0.096976 CGGTCGGTCAAATGACATGC 59.903 55.000 14.93 4.39 46.47 4.06
4463 7309 1.164411 GGTCGGTCAAATGACATGCA 58.836 50.000 14.93 0.00 46.47 3.96
4464 7310 1.539388 GGTCGGTCAAATGACATGCAA 59.461 47.619 14.93 0.00 46.47 4.08
4465 7311 2.030363 GGTCGGTCAAATGACATGCAAA 60.030 45.455 14.93 0.00 46.47 3.68
4466 7312 3.551863 GGTCGGTCAAATGACATGCAAAA 60.552 43.478 14.93 0.00 46.47 2.44
4467 7313 3.425193 GTCGGTCAAATGACATGCAAAAC 59.575 43.478 14.93 0.00 46.47 2.43
4468 7314 2.730928 CGGTCAAATGACATGCAAAACC 59.269 45.455 14.93 0.00 46.47 3.27
4469 7315 2.730928 GGTCAAATGACATGCAAAACCG 59.269 45.455 14.93 0.00 46.47 4.44
4470 7316 3.380142 GTCAAATGACATGCAAAACCGT 58.620 40.909 8.63 0.00 44.18 4.83
4471 7317 3.425193 GTCAAATGACATGCAAAACCGTC 59.575 43.478 8.63 0.00 44.18 4.79
4472 7318 3.317711 TCAAATGACATGCAAAACCGTCT 59.682 39.130 0.00 0.00 0.00 4.18
4473 7319 3.559238 AATGACATGCAAAACCGTCTC 57.441 42.857 0.00 0.00 0.00 3.36
4474 7320 2.254546 TGACATGCAAAACCGTCTCT 57.745 45.000 0.00 0.00 0.00 3.10
4475 7321 2.143122 TGACATGCAAAACCGTCTCTC 58.857 47.619 0.00 0.00 0.00 3.20
4476 7322 2.224281 TGACATGCAAAACCGTCTCTCT 60.224 45.455 0.00 0.00 0.00 3.10
4477 7323 2.413453 GACATGCAAAACCGTCTCTCTC 59.587 50.000 0.00 0.00 0.00 3.20
4478 7324 1.734465 CATGCAAAACCGTCTCTCTCC 59.266 52.381 0.00 0.00 0.00 3.71
4479 7325 1.048601 TGCAAAACCGTCTCTCTCCT 58.951 50.000 0.00 0.00 0.00 3.69
4480 7326 1.416401 TGCAAAACCGTCTCTCTCCTT 59.584 47.619 0.00 0.00 0.00 3.36
4481 7327 2.070028 GCAAAACCGTCTCTCTCCTTC 58.930 52.381 0.00 0.00 0.00 3.46
4482 7328 2.689646 CAAAACCGTCTCTCTCCTTCC 58.310 52.381 0.00 0.00 0.00 3.46
4483 7329 1.268066 AAACCGTCTCTCTCCTTCCC 58.732 55.000 0.00 0.00 0.00 3.97
4484 7330 0.114560 AACCGTCTCTCTCCTTCCCA 59.885 55.000 0.00 0.00 0.00 4.37
4485 7331 0.323908 ACCGTCTCTCTCCTTCCCAG 60.324 60.000 0.00 0.00 0.00 4.45
4486 7332 1.671901 CCGTCTCTCTCCTTCCCAGC 61.672 65.000 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.945434 CATCTCGCGTGCCCATGC 61.945 66.667 5.77 2.43 39.85 4.06
1 2 3.274586 CCATCTCGCGTGCCCATG 61.275 66.667 5.77 3.63 0.00 3.66
13 14 0.673644 CGGTGAAACTTCGGCCATCT 60.674 55.000 2.24 0.00 36.74 2.90
25 26 3.759618 ACTGGAAAGTTTTCACGGTGAAA 59.240 39.130 27.49 27.49 43.84 2.69
32 33 3.490933 GCCCTTCACTGGAAAGTTTTCAC 60.491 47.826 6.90 0.00 38.92 3.18
36 37 1.318576 CGCCCTTCACTGGAAAGTTT 58.681 50.000 0.00 0.00 31.35 2.66
75 76 0.618968 AAGCCTCCCAGTGGGTCTAG 60.619 60.000 27.87 17.49 44.74 2.43
81 82 2.490270 CTTCCCAAGCCTCCCAGTGG 62.490 65.000 0.63 0.63 0.00 4.00
85 86 1.925455 CCTCTTCCCAAGCCTCCCA 60.925 63.158 0.00 0.00 0.00 4.37
110 111 0.546598 CTAGGTAAGCCCCCTGTTGG 59.453 60.000 0.00 0.00 33.35 3.77
116 117 0.398318 CATGCTCTAGGTAAGCCCCC 59.602 60.000 0.00 0.00 39.05 5.40
146 147 4.262036 GCTCACCCATCGTAATCACATCTA 60.262 45.833 0.00 0.00 0.00 1.98
147 148 3.493350 GCTCACCCATCGTAATCACATCT 60.493 47.826 0.00 0.00 0.00 2.90
150 151 1.831106 AGCTCACCCATCGTAATCACA 59.169 47.619 0.00 0.00 0.00 3.58
152 153 2.107366 TGAGCTCACCCATCGTAATCA 58.893 47.619 13.74 0.00 0.00 2.57
156 200 0.824109 CCTTGAGCTCACCCATCGTA 59.176 55.000 18.03 0.00 0.00 3.43
158 202 1.153289 CCCTTGAGCTCACCCATCG 60.153 63.158 18.03 0.00 0.00 3.84
161 205 1.461268 TCACCCTTGAGCTCACCCA 60.461 57.895 18.03 0.20 0.00 4.51
172 216 2.895424 CGAACAGCCCCTCACCCTT 61.895 63.158 0.00 0.00 0.00 3.95
187 231 2.277591 CCCGTGTGTCCTACCCGAA 61.278 63.158 0.00 0.00 31.42 4.30
190 234 4.091939 GCCCCGTGTGTCCTACCC 62.092 72.222 0.00 0.00 0.00 3.69
204 248 1.623542 ATGTGGTCCTACCGAAGCCC 61.624 60.000 0.00 0.00 42.58 5.19
206 250 0.535335 TGATGTGGTCCTACCGAAGC 59.465 55.000 0.00 0.00 42.58 3.86
211 255 3.118371 CCTAAGGTTGATGTGGTCCTACC 60.118 52.174 0.00 0.00 39.22 3.18
216 260 3.440522 GCTTTCCTAAGGTTGATGTGGTC 59.559 47.826 0.00 0.00 31.76 4.02
225 269 2.552373 CCTTGTCGGCTTTCCTAAGGTT 60.552 50.000 0.00 0.00 34.07 3.50
227 271 1.278127 TCCTTGTCGGCTTTCCTAAGG 59.722 52.381 0.00 0.00 37.15 2.69
240 284 4.153835 CAGCAAACTCTGAATCTCCTTGTC 59.846 45.833 0.00 0.00 36.19 3.18
250 294 1.349026 CCTCCTCCAGCAAACTCTGAA 59.651 52.381 0.00 0.00 36.19 3.02
251 295 0.979665 CCTCCTCCAGCAAACTCTGA 59.020 55.000 0.00 0.00 36.19 3.27
253 297 0.689623 CACCTCCTCCAGCAAACTCT 59.310 55.000 0.00 0.00 0.00 3.24
257 301 0.250234 CGATCACCTCCTCCAGCAAA 59.750 55.000 0.00 0.00 0.00 3.68
270 314 2.804527 CCACCACATCATGATCGATCAC 59.195 50.000 29.49 3.46 40.03 3.06
272 316 2.804527 CACCACCACATCATGATCGATC 59.195 50.000 18.72 18.72 0.00 3.69
273 317 2.486013 CCACCACCACATCATGATCGAT 60.486 50.000 4.86 0.00 0.00 3.59
274 318 1.134431 CCACCACCACATCATGATCGA 60.134 52.381 4.86 0.00 0.00 3.59
275 319 1.302366 CCACCACCACATCATGATCG 58.698 55.000 4.86 4.49 0.00 3.69
276 320 2.292267 GACCACCACCACATCATGATC 58.708 52.381 4.86 0.00 0.00 2.92
277 321 1.634973 TGACCACCACCACATCATGAT 59.365 47.619 1.18 1.18 0.00 2.45
278 322 1.003464 CTGACCACCACCACATCATGA 59.997 52.381 0.00 0.00 0.00 3.07
279 323 1.456296 CTGACCACCACCACATCATG 58.544 55.000 0.00 0.00 0.00 3.07
280 324 0.322816 GCTGACCACCACCACATCAT 60.323 55.000 0.00 0.00 0.00 2.45
281 325 1.073025 GCTGACCACCACCACATCA 59.927 57.895 0.00 0.00 0.00 3.07
298 342 0.736053 ATCGTCTTCTCCGACTCTGC 59.264 55.000 0.00 0.00 37.12 4.26
301 345 2.531206 CCAAATCGTCTTCTCCGACTC 58.469 52.381 0.00 0.00 37.12 3.36
304 348 1.067142 CACCCAAATCGTCTTCTCCGA 60.067 52.381 0.00 0.00 38.89 4.55
327 371 1.908483 CAGGAGGCCCTAAGTCACC 59.092 63.158 0.00 0.00 42.02 4.02
329 373 0.621571 ATGCAGGAGGCCCTAAGTCA 60.622 55.000 0.00 0.00 42.02 3.41
330 374 0.548510 AATGCAGGAGGCCCTAAGTC 59.451 55.000 0.00 0.00 42.02 3.01
331 375 0.257039 CAATGCAGGAGGCCCTAAGT 59.743 55.000 0.00 0.00 42.02 2.24
332 376 0.548031 TCAATGCAGGAGGCCCTAAG 59.452 55.000 0.00 0.00 42.02 2.18
349 394 5.042463 TGTAAACCACACAGAAGGAATCA 57.958 39.130 0.00 0.00 30.04 2.57
371 416 2.786512 AAATCCCCATGTGCAGGCGT 62.787 55.000 0.00 0.00 0.00 5.68
380 442 0.394216 TGACGAGCCAAATCCCCATG 60.394 55.000 0.00 0.00 0.00 3.66
385 447 1.200020 CAACCTTGACGAGCCAAATCC 59.800 52.381 0.00 0.00 0.00 3.01
387 449 1.981256 ACAACCTTGACGAGCCAAAT 58.019 45.000 0.00 0.00 0.00 2.32
391 453 0.307760 CACAACAACCTTGACGAGCC 59.692 55.000 0.00 0.00 0.00 4.70
427 493 1.722751 CGAGTGATGCTTGTTTCACGC 60.723 52.381 0.00 0.00 45.42 5.34
429 495 2.287915 ACACGAGTGATGCTTGTTTCAC 59.712 45.455 10.50 0.00 39.76 3.18
452 527 7.225734 TCTCACATTCTCGTCTTGTATAGAGAG 59.774 40.741 0.00 0.00 40.33 3.20
471 546 1.006043 TCTTCCCCGAGACTCTCACAT 59.994 52.381 6.86 0.00 0.00 3.21
472 547 0.404426 TCTTCCCCGAGACTCTCACA 59.596 55.000 6.86 0.00 0.00 3.58
488 565 6.801539 TCTAATCATTGTGCGTTTCTTCTT 57.198 33.333 0.00 0.00 0.00 2.52
494 571 5.794687 TCGATTCTAATCATTGTGCGTTT 57.205 34.783 3.76 0.00 35.11 3.60
520 597 2.355108 CCTCAATTTCTCCTCCTTGCGA 60.355 50.000 0.00 0.00 0.00 5.10
522 599 3.277715 CTCCTCAATTTCTCCTCCTTGC 58.722 50.000 0.00 0.00 0.00 4.01
525 602 2.486716 CCCTCCTCAATTTCTCCTCCT 58.513 52.381 0.00 0.00 0.00 3.69
535 612 2.092212 CACCAACATAGCCCTCCTCAAT 60.092 50.000 0.00 0.00 0.00 2.57
536 613 1.281867 CACCAACATAGCCCTCCTCAA 59.718 52.381 0.00 0.00 0.00 3.02
552 629 1.907807 GACCTTGCCAATGCCACCA 60.908 57.895 0.00 0.00 36.33 4.17
555 632 2.676121 CGGACCTTGCCAATGCCA 60.676 61.111 0.00 0.00 36.33 4.92
556 633 3.451894 CCGGACCTTGCCAATGCC 61.452 66.667 0.00 0.00 36.33 4.40
557 634 4.133796 GCCGGACCTTGCCAATGC 62.134 66.667 5.05 0.00 38.26 3.56
558 635 3.814268 CGCCGGACCTTGCCAATG 61.814 66.667 5.05 0.00 0.00 2.82
612 689 1.612469 CGACTCGTGCAACTGAGCAG 61.612 60.000 10.78 0.00 46.69 4.24
614 691 0.386858 TACGACTCGTGCAACTGAGC 60.387 55.000 14.47 4.72 41.39 4.26
618 695 1.442184 CGCTACGACTCGTGCAACT 60.442 57.895 14.47 0.00 41.39 3.16
619 696 3.055905 GCGCTACGACTCGTGCAAC 62.056 63.158 14.47 7.15 41.39 4.17
659 736 0.963856 ACGTGATCGCTAGGACACCA 60.964 55.000 4.48 0.00 41.18 4.17
685 767 5.625656 CGGTAGATCTTTTGCCTCTCTTCTT 60.626 44.000 0.00 0.00 0.00 2.52
709 791 0.393537 CACCTCATGCTTGACTCCCC 60.394 60.000 0.00 0.00 0.00 4.81
729 811 3.961197 TCGAGCACAGCGACGTGT 61.961 61.111 0.00 0.00 39.19 4.49
760 842 3.073062 TCTTTTCTAGCCTGCTCCAACTT 59.927 43.478 0.00 0.00 0.00 2.66
761 843 2.639839 TCTTTTCTAGCCTGCTCCAACT 59.360 45.455 0.00 0.00 0.00 3.16
763 845 3.788227 TTCTTTTCTAGCCTGCTCCAA 57.212 42.857 0.00 0.00 0.00 3.53
767 849 3.073062 TCACCTTTCTTTTCTAGCCTGCT 59.927 43.478 0.00 0.00 0.00 4.24
770 852 5.495640 CATCTCACCTTTCTTTTCTAGCCT 58.504 41.667 0.00 0.00 0.00 4.58
771 853 4.637977 CCATCTCACCTTTCTTTTCTAGCC 59.362 45.833 0.00 0.00 0.00 3.93
773 855 5.578727 CGTCCATCTCACCTTTCTTTTCTAG 59.421 44.000 0.00 0.00 0.00 2.43
779 861 3.515502 TCATCGTCCATCTCACCTTTCTT 59.484 43.478 0.00 0.00 0.00 2.52
810 892 7.105588 AGTGCTGACATGATTTTGACTATACA 58.894 34.615 0.00 0.00 0.00 2.29
855 941 4.591929 TCTGGATGCTTTCATGACATGAA 58.408 39.130 23.89 23.89 46.77 2.57
864 950 5.084818 TCGAGTAAATCTGGATGCTTTCA 57.915 39.130 0.00 0.00 0.00 2.69
865 951 5.006165 CACTCGAGTAAATCTGGATGCTTTC 59.994 44.000 19.57 0.00 30.92 2.62
926 1017 6.750501 GTCTCTCAACTTTAAAACCCACAAAC 59.249 38.462 0.00 0.00 0.00 2.93
958 1064 0.108992 TTTTCGTCCTCGATCCCACG 60.109 55.000 0.00 0.00 45.65 4.94
961 1067 5.780984 AGTATAATTTTCGTCCTCGATCCC 58.219 41.667 0.00 0.00 45.65 3.85
962 1068 6.679843 AGAGTATAATTTTCGTCCTCGATCC 58.320 40.000 0.00 0.00 45.65 3.36
963 1069 8.576936 AAAGAGTATAATTTTCGTCCTCGATC 57.423 34.615 0.00 0.00 45.65 3.69
989 1106 5.639931 GGCGTAACTTCTTCTCTCAAGAAAT 59.360 40.000 0.00 0.00 40.95 2.17
1003 1120 3.484547 CCGTGCGGGCGTAACTTC 61.485 66.667 2.15 0.00 0.00 3.01
1013 1130 2.879462 GTCGAGTTAGCCGTGCGG 60.879 66.667 6.22 6.22 38.57 5.69
1022 1139 1.372499 GCTGCGTGGTGTCGAGTTA 60.372 57.895 0.00 0.00 0.00 2.24
1023 1140 2.661866 GCTGCGTGGTGTCGAGTT 60.662 61.111 0.00 0.00 0.00 3.01
1066 3875 2.279120 GGACCTCGAGAGCATGCG 60.279 66.667 15.71 0.00 0.00 4.73
1099 3908 4.680237 CGGCGGTCTTGGTCTGCA 62.680 66.667 0.00 0.00 38.75 4.41
1497 4312 3.011119 GGAGTAGAAGTCGAGCAGAGAA 58.989 50.000 0.00 0.00 0.00 2.87
1503 4318 1.062880 CACGAGGAGTAGAAGTCGAGC 59.937 57.143 0.00 0.00 36.30 5.03
1527 4342 1.879884 GTGAGATGCGCGCAGATCA 60.880 57.895 38.44 35.90 0.00 2.92
1557 4372 1.762957 TCATTCCTCGGATGAAGGGAC 59.237 52.381 7.62 0.00 0.00 4.46
1628 4443 1.613630 AGAAGACCCAGGGCGTCAT 60.614 57.895 4.91 0.00 32.41 3.06
1640 4455 1.066908 CAGGCATCCTCTCGAGAAGAC 59.933 57.143 15.83 8.53 0.00 3.01
1761 4576 0.469070 GCCTCACTCCATCATCAGCT 59.531 55.000 0.00 0.00 0.00 4.24
1764 4579 0.687427 TCGGCCTCACTCCATCATCA 60.687 55.000 0.00 0.00 0.00 3.07
1815 4630 0.460284 ACGCTCCCATCTTTACGCAG 60.460 55.000 0.00 0.00 0.00 5.18
1851 4666 2.734606 TCGAACCAAACAGCTATGAACG 59.265 45.455 0.00 0.00 0.00 3.95
1941 4756 0.469705 AAACCAGCAAGGCATCACCA 60.470 50.000 0.00 0.00 43.14 4.17
1965 4780 2.033194 GGACGGCTTTTCCAGGTCG 61.033 63.158 0.00 0.00 36.57 4.79
2342 5157 2.094597 ACAATTGGCAATCGACACATGG 60.095 45.455 14.04 0.00 0.00 3.66
2418 5233 4.282957 TGAACCATTTTGCCTTGCTCAATA 59.717 37.500 0.00 0.00 0.00 1.90
2559 5374 2.489329 CCAAGAAGCGACATTTGGTGAT 59.511 45.455 0.00 0.00 36.25 3.06
2586 5401 2.485677 CGCAAGCCCATTGATGAGT 58.514 52.632 0.00 0.00 41.83 3.41
2640 5455 1.303309 GATGCTTCAACATCCTCCCG 58.697 55.000 0.00 0.00 40.52 5.14
2781 5596 3.134458 GACAGCACAGGTATAATGCTCC 58.866 50.000 0.00 0.00 46.68 4.70
2865 5680 2.289320 CCATACCACTCTATCTGCTGGC 60.289 54.545 0.00 0.00 0.00 4.85
2877 5692 1.009675 AGTAAGGCTCCCCATACCACT 59.990 52.381 0.00 0.00 36.24 4.00
2893 5708 1.639722 TACCAGCAGGCAGTGAGTAA 58.360 50.000 0.00 0.00 39.06 2.24
2916 5731 1.839994 TCACCCATCTCCAAGTCCATC 59.160 52.381 0.00 0.00 0.00 3.51
3246 6061 4.571176 GCGAAGGGGAGTTTAGTAATTCAG 59.429 45.833 0.00 0.00 0.00 3.02
3301 6116 3.314913 TGCACACAAATGTAGGAACACAG 59.685 43.478 0.00 0.00 38.78 3.66
3309 6124 5.288015 TCAAATTGGTGCACACAAATGTAG 58.712 37.500 20.43 9.98 36.72 2.74
3341 6157 6.484364 TGTCAGATATGAGCATTCAAGGTA 57.516 37.500 0.00 0.00 36.78 3.08
3353 6169 6.877236 TCACTAGCAATGTTGTCAGATATGA 58.123 36.000 0.00 0.00 0.00 2.15
3357 6173 7.458409 AAAATCACTAGCAATGTTGTCAGAT 57.542 32.000 0.00 0.00 0.00 2.90
3359 6175 9.121517 CTTTAAAATCACTAGCAATGTTGTCAG 57.878 33.333 0.00 0.00 0.00 3.51
3374 6190 9.994432 CATACATTCAGGAGTCTTTAAAATCAC 57.006 33.333 0.00 0.00 0.00 3.06
3385 6201 9.853555 CAGATAAGATACATACATTCAGGAGTC 57.146 37.037 0.00 0.00 0.00 3.36
3386 6202 8.310382 GCAGATAAGATACATACATTCAGGAGT 58.690 37.037 0.00 0.00 0.00 3.85
3387 6203 8.530311 AGCAGATAAGATACATACATTCAGGAG 58.470 37.037 0.00 0.00 0.00 3.69
3502 6348 8.203485 AGGTAATTGCTTCAAAAGAAAATGTGA 58.797 29.630 0.00 0.00 27.62 3.58
3609 6455 9.847224 TTTCTGAATCTGGTTTTATAGGGTATC 57.153 33.333 0.00 0.00 0.00 2.24
3630 6476 5.689819 AGTTTCCGATCGAAATTGTTTCTG 58.310 37.500 18.66 0.00 42.38 3.02
3631 6477 5.941948 AGTTTCCGATCGAAATTGTTTCT 57.058 34.783 18.66 5.03 42.38 2.52
3671 6517 3.952323 AGATCTCATTGTTGCCTCCAATG 59.048 43.478 11.70 11.70 46.72 2.82
3680 6526 4.001652 AGTGTGCTCAGATCTCATTGTTG 58.998 43.478 0.00 0.00 0.00 3.33
3703 6549 1.009829 GGCTAACATGAAGACTGCGG 58.990 55.000 0.00 0.00 0.00 5.69
3705 6551 1.726853 ACGGCTAACATGAAGACTGC 58.273 50.000 0.00 0.00 0.00 4.40
3712 6558 1.476110 GGGGCATAACGGCTAACATGA 60.476 52.381 0.00 0.00 40.90 3.07
3713 6559 0.951558 GGGGCATAACGGCTAACATG 59.048 55.000 0.00 0.00 40.90 3.21
3714 6560 0.843984 AGGGGCATAACGGCTAACAT 59.156 50.000 0.00 0.00 40.90 2.71
3715 6561 0.179468 GAGGGGCATAACGGCTAACA 59.821 55.000 0.00 0.00 40.90 2.41
3716 6562 0.179468 TGAGGGGCATAACGGCTAAC 59.821 55.000 0.00 0.00 40.90 2.34
3717 6563 0.179468 GTGAGGGGCATAACGGCTAA 59.821 55.000 0.00 0.00 40.90 3.09
3718 6564 1.692173 GGTGAGGGGCATAACGGCTA 61.692 60.000 0.00 0.00 40.90 3.93
3719 6565 2.590092 GTGAGGGGCATAACGGCT 59.410 61.111 0.00 0.00 40.90 5.52
3720 6566 2.516225 GGTGAGGGGCATAACGGC 60.516 66.667 0.00 0.00 40.20 5.68
3721 6567 2.192175 GGGTGAGGGGCATAACGG 59.808 66.667 0.00 0.00 0.00 4.44
3722 6568 2.192175 GGGGTGAGGGGCATAACG 59.808 66.667 0.00 0.00 0.00 3.18
3723 6569 1.532238 GAGGGGTGAGGGGCATAAC 59.468 63.158 0.00 0.00 0.00 1.89
3724 6570 1.696314 GGAGGGGTGAGGGGCATAA 60.696 63.158 0.00 0.00 0.00 1.90
3725 6571 2.039831 GGAGGGGTGAGGGGCATA 60.040 66.667 0.00 0.00 0.00 3.14
3732 6578 4.075793 TCTCGGGGGAGGGGTGAG 62.076 72.222 0.00 0.00 0.00 3.51
3733 6579 4.393778 GTCTCGGGGGAGGGGTGA 62.394 72.222 0.00 0.00 0.00 4.02
3736 6582 4.541648 ATCGTCTCGGGGGAGGGG 62.542 72.222 0.00 0.00 0.00 4.79
3737 6583 1.623542 AAAATCGTCTCGGGGGAGGG 61.624 60.000 0.00 0.00 0.00 4.30
3738 6584 0.252197 AAAAATCGTCTCGGGGGAGG 59.748 55.000 0.00 0.00 0.00 4.30
3739 6585 1.369625 CAAAAATCGTCTCGGGGGAG 58.630 55.000 0.00 0.00 0.00 4.30
3740 6586 0.675522 GCAAAAATCGTCTCGGGGGA 60.676 55.000 0.00 0.00 0.00 4.81
3741 6587 1.800681 GCAAAAATCGTCTCGGGGG 59.199 57.895 0.00 0.00 0.00 5.40
3742 6588 1.423845 CGCAAAAATCGTCTCGGGG 59.576 57.895 0.00 0.00 0.00 5.73
3743 6589 1.226018 GCGCAAAAATCGTCTCGGG 60.226 57.895 0.30 0.00 0.00 5.14
3744 6590 1.226018 GGCGCAAAAATCGTCTCGG 60.226 57.895 10.83 0.00 0.00 4.63
3745 6591 0.519175 CTGGCGCAAAAATCGTCTCG 60.519 55.000 10.83 0.00 32.08 4.04
3746 6592 0.796312 TCTGGCGCAAAAATCGTCTC 59.204 50.000 10.83 0.00 32.08 3.36
3747 6593 1.453155 ATCTGGCGCAAAAATCGTCT 58.547 45.000 10.83 0.00 32.08 4.18
3748 6594 3.996825 ATCTGGCGCAAAAATCGTC 57.003 47.368 10.83 0.00 0.00 4.20
4145 6991 0.458370 CACCCAGCAAAATTAGCGCC 60.458 55.000 2.29 0.00 37.01 6.53
4146 6992 0.458370 CCACCCAGCAAAATTAGCGC 60.458 55.000 0.00 0.00 37.01 5.92
4147 6993 0.173255 CCCACCCAGCAAAATTAGCG 59.827 55.000 0.00 0.00 37.01 4.26
4148 6994 1.066929 CACCCACCCAGCAAAATTAGC 60.067 52.381 0.00 0.00 0.00 3.09
4149 6995 2.493278 CTCACCCACCCAGCAAAATTAG 59.507 50.000 0.00 0.00 0.00 1.73
4150 6996 2.524306 CTCACCCACCCAGCAAAATTA 58.476 47.619 0.00 0.00 0.00 1.40
4151 6997 1.341080 CTCACCCACCCAGCAAAATT 58.659 50.000 0.00 0.00 0.00 1.82
4152 6998 0.542702 CCTCACCCACCCAGCAAAAT 60.543 55.000 0.00 0.00 0.00 1.82
4153 6999 1.152567 CCTCACCCACCCAGCAAAA 60.153 57.895 0.00 0.00 0.00 2.44
4154 7000 2.520458 CCTCACCCACCCAGCAAA 59.480 61.111 0.00 0.00 0.00 3.68
4155 7001 3.579302 CCCTCACCCACCCAGCAA 61.579 66.667 0.00 0.00 0.00 3.91
4177 7023 4.735358 GAAACTCCCCGCCCCACC 62.735 72.222 0.00 0.00 0.00 4.61
4178 7024 4.735358 GGAAACTCCCCGCCCCAC 62.735 72.222 0.00 0.00 0.00 4.61
4187 7033 2.615747 GGCTCAACTACTGGGAAACTCC 60.616 54.545 0.00 0.00 35.23 3.85
4188 7034 2.615747 GGGCTCAACTACTGGGAAACTC 60.616 54.545 0.00 0.00 0.00 3.01
4189 7035 1.351350 GGGCTCAACTACTGGGAAACT 59.649 52.381 0.00 0.00 0.00 2.66
4190 7036 1.613520 GGGGCTCAACTACTGGGAAAC 60.614 57.143 0.00 0.00 0.00 2.78
4191 7037 0.696501 GGGGCTCAACTACTGGGAAA 59.303 55.000 0.00 0.00 0.00 3.13
4192 7038 1.205460 GGGGGCTCAACTACTGGGAA 61.205 60.000 0.00 0.00 0.00 3.97
4193 7039 1.615424 GGGGGCTCAACTACTGGGA 60.615 63.158 0.00 0.00 0.00 4.37
4194 7040 1.915078 CTGGGGGCTCAACTACTGGG 61.915 65.000 0.00 0.00 0.00 4.45
4195 7041 1.604378 CTGGGGGCTCAACTACTGG 59.396 63.158 0.00 0.00 0.00 4.00
4196 7042 1.604378 CCTGGGGGCTCAACTACTG 59.396 63.158 0.00 0.00 0.00 2.74
4197 7043 4.153957 CCTGGGGGCTCAACTACT 57.846 61.111 0.00 0.00 0.00 2.57
4208 7054 4.641645 TGTGCAGAACGCCTGGGG 62.642 66.667 9.49 9.49 43.13 4.96
4209 7055 3.052082 CTGTGCAGAACGCCTGGG 61.052 66.667 7.41 0.00 43.13 4.45
4210 7056 3.052082 CCTGTGCAGAACGCCTGG 61.052 66.667 0.02 0.00 43.13 4.45
4211 7057 3.730761 GCCTGTGCAGAACGCCTG 61.731 66.667 0.02 1.43 45.67 4.85
4214 7060 4.374702 CACGCCTGTGCAGAACGC 62.375 66.667 5.93 0.00 39.67 4.84
4215 7061 3.716006 CCACGCCTGTGCAGAACG 61.716 66.667 4.62 4.62 45.04 3.95
4216 7062 3.357079 CCCACGCCTGTGCAGAAC 61.357 66.667 0.02 0.00 45.04 3.01
4217 7063 3.535629 CTCCCACGCCTGTGCAGAA 62.536 63.158 0.02 0.00 45.04 3.02
4218 7064 4.007644 CTCCCACGCCTGTGCAGA 62.008 66.667 0.02 0.00 45.04 4.26
4219 7065 3.832237 AACTCCCACGCCTGTGCAG 62.832 63.158 0.00 0.00 45.04 4.41
4220 7066 3.872603 AACTCCCACGCCTGTGCA 61.873 61.111 0.00 0.00 45.04 4.57
4221 7067 3.357079 CAACTCCCACGCCTGTGC 61.357 66.667 0.00 0.00 45.04 4.57
4222 7068 2.669569 CCAACTCCCACGCCTGTG 60.670 66.667 0.00 0.00 46.00 3.66
4223 7069 3.168528 ACCAACTCCCACGCCTGT 61.169 61.111 0.00 0.00 0.00 4.00
4224 7070 2.669569 CACCAACTCCCACGCCTG 60.670 66.667 0.00 0.00 0.00 4.85
4225 7071 3.953775 CCACCAACTCCCACGCCT 61.954 66.667 0.00 0.00 0.00 5.52
4228 7074 3.783362 TTGCCCACCAACTCCCACG 62.783 63.158 0.00 0.00 0.00 4.94
4229 7075 1.903404 CTTGCCCACCAACTCCCAC 60.903 63.158 0.00 0.00 0.00 4.61
4230 7076 2.067932 CTCTTGCCCACCAACTCCCA 62.068 60.000 0.00 0.00 0.00 4.37
4231 7077 1.303643 CTCTTGCCCACCAACTCCC 60.304 63.158 0.00 0.00 0.00 4.30
4232 7078 0.110486 TTCTCTTGCCCACCAACTCC 59.890 55.000 0.00 0.00 0.00 3.85
4233 7079 1.528129 CTTCTCTTGCCCACCAACTC 58.472 55.000 0.00 0.00 0.00 3.01
4234 7080 0.111253 CCTTCTCTTGCCCACCAACT 59.889 55.000 0.00 0.00 0.00 3.16
4235 7081 0.110486 TCCTTCTCTTGCCCACCAAC 59.890 55.000 0.00 0.00 0.00 3.77
4236 7082 0.401738 CTCCTTCTCTTGCCCACCAA 59.598 55.000 0.00 0.00 0.00 3.67
4237 7083 0.473694 TCTCCTTCTCTTGCCCACCA 60.474 55.000 0.00 0.00 0.00 4.17
4238 7084 0.693049 TTCTCCTTCTCTTGCCCACC 59.307 55.000 0.00 0.00 0.00 4.61
4239 7085 1.625818 TCTTCTCCTTCTCTTGCCCAC 59.374 52.381 0.00 0.00 0.00 4.61
4240 7086 1.625818 GTCTTCTCCTTCTCTTGCCCA 59.374 52.381 0.00 0.00 0.00 5.36
4241 7087 1.905894 AGTCTTCTCCTTCTCTTGCCC 59.094 52.381 0.00 0.00 0.00 5.36
4242 7088 3.007398 TGAAGTCTTCTCCTTCTCTTGCC 59.993 47.826 13.67 0.00 39.24 4.52
4243 7089 4.264460 TGAAGTCTTCTCCTTCTCTTGC 57.736 45.455 13.67 0.00 39.24 4.01
4244 7090 5.792741 ACATGAAGTCTTCTCCTTCTCTTG 58.207 41.667 13.67 0.00 39.24 3.02
4245 7091 6.432403 AACATGAAGTCTTCTCCTTCTCTT 57.568 37.500 13.67 0.00 39.24 2.85
4246 7092 6.951198 TCTAACATGAAGTCTTCTCCTTCTCT 59.049 38.462 13.67 0.00 39.24 3.10
4247 7093 7.164230 TCTAACATGAAGTCTTCTCCTTCTC 57.836 40.000 13.67 0.00 39.24 2.87
4248 7094 6.350949 GCTCTAACATGAAGTCTTCTCCTTCT 60.351 42.308 13.67 0.00 39.24 2.85
4249 7095 5.810074 GCTCTAACATGAAGTCTTCTCCTTC 59.190 44.000 13.67 0.00 39.01 3.46
4250 7096 5.247110 TGCTCTAACATGAAGTCTTCTCCTT 59.753 40.000 13.67 4.73 0.00 3.36
4251 7097 4.774726 TGCTCTAACATGAAGTCTTCTCCT 59.225 41.667 13.67 0.00 0.00 3.69
4252 7098 5.078411 TGCTCTAACATGAAGTCTTCTCC 57.922 43.478 13.67 0.00 0.00 3.71
4253 7099 6.572519 AGATGCTCTAACATGAAGTCTTCTC 58.427 40.000 13.67 0.00 0.00 2.87
4254 7100 6.406849 GGAGATGCTCTAACATGAAGTCTTCT 60.407 42.308 13.67 6.40 0.00 2.85
4255 7101 5.752955 GGAGATGCTCTAACATGAAGTCTTC 59.247 44.000 5.58 5.58 0.00 2.87
4256 7102 5.188555 TGGAGATGCTCTAACATGAAGTCTT 59.811 40.000 0.00 0.00 0.00 3.01
4257 7103 4.713814 TGGAGATGCTCTAACATGAAGTCT 59.286 41.667 0.00 0.00 0.00 3.24
4258 7104 5.016051 TGGAGATGCTCTAACATGAAGTC 57.984 43.478 0.00 0.00 0.00 3.01
4259 7105 4.682859 GCTGGAGATGCTCTAACATGAAGT 60.683 45.833 0.00 0.00 0.00 3.01
4260 7106 3.808726 GCTGGAGATGCTCTAACATGAAG 59.191 47.826 0.00 0.00 0.00 3.02
4261 7107 3.432749 GGCTGGAGATGCTCTAACATGAA 60.433 47.826 0.00 0.00 0.00 2.57
4262 7108 2.103771 GGCTGGAGATGCTCTAACATGA 59.896 50.000 0.00 0.00 0.00 3.07
4263 7109 2.492012 GGCTGGAGATGCTCTAACATG 58.508 52.381 0.00 0.00 0.00 3.21
4264 7110 1.069823 CGGCTGGAGATGCTCTAACAT 59.930 52.381 0.00 0.00 0.00 2.71
4265 7111 0.461548 CGGCTGGAGATGCTCTAACA 59.538 55.000 0.00 0.00 0.00 2.41
4266 7112 0.461961 ACGGCTGGAGATGCTCTAAC 59.538 55.000 0.00 0.00 0.00 2.34
4267 7113 1.195115 AACGGCTGGAGATGCTCTAA 58.805 50.000 0.00 0.00 0.00 2.10
4268 7114 2.067365 TAACGGCTGGAGATGCTCTA 57.933 50.000 0.00 0.00 0.00 2.43
4269 7115 1.069823 CATAACGGCTGGAGATGCTCT 59.930 52.381 0.00 0.00 0.00 4.09
4270 7116 1.506493 CATAACGGCTGGAGATGCTC 58.494 55.000 0.00 0.00 0.00 4.26
4271 7117 0.533755 GCATAACGGCTGGAGATGCT 60.534 55.000 16.88 0.00 39.81 3.79
4272 7118 1.510480 GGCATAACGGCTGGAGATGC 61.510 60.000 16.20 16.20 41.73 3.91
4273 7119 0.886490 GGGCATAACGGCTGGAGATG 60.886 60.000 0.00 0.00 40.90 2.90
4274 7120 1.451936 GGGCATAACGGCTGGAGAT 59.548 57.895 0.00 0.00 40.90 2.75
4275 7121 2.742116 GGGGCATAACGGCTGGAGA 61.742 63.158 0.00 0.00 40.90 3.71
4276 7122 2.203209 GGGGCATAACGGCTGGAG 60.203 66.667 0.00 0.00 40.90 3.86
4277 7123 2.690881 AGGGGCATAACGGCTGGA 60.691 61.111 0.00 0.00 40.90 3.86
4278 7124 2.203209 GAGGGGCATAACGGCTGG 60.203 66.667 0.00 0.00 40.90 4.85
4279 7125 1.819632 GTGAGGGGCATAACGGCTG 60.820 63.158 0.00 0.00 40.90 4.85
4280 7126 2.590092 GTGAGGGGCATAACGGCT 59.410 61.111 0.00 0.00 40.90 5.52
4281 7127 2.516225 GGTGAGGGGCATAACGGC 60.516 66.667 0.00 0.00 40.20 5.68
4282 7128 2.192175 GGGTGAGGGGCATAACGG 59.808 66.667 0.00 0.00 0.00 4.44
4283 7129 2.192175 GGGGTGAGGGGCATAACG 59.808 66.667 0.00 0.00 0.00 3.18
4284 7130 2.601299 GGGGGTGAGGGGCATAAC 59.399 66.667 0.00 0.00 0.00 1.89
4298 7144 2.898472 AATCGTCTCAGGGGAGGGGG 62.898 65.000 0.00 0.00 41.69 5.40
4299 7145 0.983378 AAATCGTCTCAGGGGAGGGG 60.983 60.000 0.00 0.00 41.69 4.79
4300 7146 0.912486 AAAATCGTCTCAGGGGAGGG 59.088 55.000 0.00 0.00 41.69 4.30
4301 7147 2.359900 CAAAAATCGTCTCAGGGGAGG 58.640 52.381 0.00 0.00 41.69 4.30
4302 7148 1.740025 GCAAAAATCGTCTCAGGGGAG 59.260 52.381 0.00 0.00 42.80 4.30
4303 7149 1.821216 GCAAAAATCGTCTCAGGGGA 58.179 50.000 0.00 0.00 0.00 4.81
4304 7150 0.447801 CGCAAAAATCGTCTCAGGGG 59.552 55.000 0.00 0.00 0.00 4.79
4305 7151 0.179189 GCGCAAAAATCGTCTCAGGG 60.179 55.000 0.30 0.00 0.00 4.45
4306 7152 0.179189 GGCGCAAAAATCGTCTCAGG 60.179 55.000 10.83 0.00 0.00 3.86
4307 7153 0.516877 TGGCGCAAAAATCGTCTCAG 59.483 50.000 10.83 0.00 32.08 3.35
4308 7154 0.516877 CTGGCGCAAAAATCGTCTCA 59.483 50.000 10.83 0.00 32.08 3.27
4309 7155 0.796312 TCTGGCGCAAAAATCGTCTC 59.204 50.000 10.83 0.00 32.08 3.36
4310 7156 1.131126 CATCTGGCGCAAAAATCGTCT 59.869 47.619 10.83 0.00 32.08 4.18
4311 7157 1.130373 TCATCTGGCGCAAAAATCGTC 59.870 47.619 10.83 0.00 0.00 4.20
4312 7158 1.164411 TCATCTGGCGCAAAAATCGT 58.836 45.000 10.83 0.00 0.00 3.73
4313 7159 2.159531 TCTTCATCTGGCGCAAAAATCG 60.160 45.455 10.83 0.00 0.00 3.34
4314 7160 3.492421 TCTTCATCTGGCGCAAAAATC 57.508 42.857 10.83 0.00 0.00 2.17
4315 7161 4.460948 AATCTTCATCTGGCGCAAAAAT 57.539 36.364 10.83 0.00 0.00 1.82
4316 7162 3.940209 AATCTTCATCTGGCGCAAAAA 57.060 38.095 10.83 0.00 0.00 1.94
4317 7163 3.577667 CAAATCTTCATCTGGCGCAAAA 58.422 40.909 10.83 0.00 0.00 2.44
4318 7164 2.671914 GCAAATCTTCATCTGGCGCAAA 60.672 45.455 10.83 0.00 0.00 3.68
4319 7165 1.135315 GCAAATCTTCATCTGGCGCAA 60.135 47.619 10.83 0.00 0.00 4.85
4320 7166 0.452987 GCAAATCTTCATCTGGCGCA 59.547 50.000 10.83 0.00 0.00 6.09
4321 7167 0.248784 GGCAAATCTTCATCTGGCGC 60.249 55.000 0.00 0.00 0.00 6.53
4322 7168 3.932459 GGCAAATCTTCATCTGGCG 57.068 52.632 0.00 0.00 0.00 5.69
4323 7169 0.383231 CCGGCAAATCTTCATCTGGC 59.617 55.000 0.00 0.00 0.00 4.85
4324 7170 0.383231 GCCGGCAAATCTTCATCTGG 59.617 55.000 24.80 0.00 0.00 3.86
4325 7171 0.028505 CGCCGGCAAATCTTCATCTG 59.971 55.000 28.98 0.12 0.00 2.90
4326 7172 1.718757 GCGCCGGCAAATCTTCATCT 61.719 55.000 28.98 0.00 39.62 2.90
4327 7173 1.298638 GCGCCGGCAAATCTTCATC 60.299 57.895 28.98 0.00 39.62 2.92
4328 7174 0.463654 TAGCGCCGGCAAATCTTCAT 60.464 50.000 28.98 2.92 43.41 2.57
4329 7175 0.675208 TTAGCGCCGGCAAATCTTCA 60.675 50.000 28.98 5.03 43.41 3.02
4330 7176 0.663153 ATTAGCGCCGGCAAATCTTC 59.337 50.000 28.98 5.59 43.41 2.87
4331 7177 1.102978 AATTAGCGCCGGCAAATCTT 58.897 45.000 28.98 11.02 43.41 2.40
4332 7178 1.102978 AAATTAGCGCCGGCAAATCT 58.897 45.000 28.98 18.76 43.41 2.40
4333 7179 1.587946 CAAAATTAGCGCCGGCAAATC 59.412 47.619 28.98 12.08 43.41 2.17
4334 7180 1.639280 CAAAATTAGCGCCGGCAAAT 58.361 45.000 28.98 19.15 43.41 2.32
4335 7181 1.011451 GCAAAATTAGCGCCGGCAAA 61.011 50.000 28.98 17.63 43.41 3.68
4336 7182 1.445238 GCAAAATTAGCGCCGGCAA 60.445 52.632 28.98 14.33 43.41 4.52
4337 7183 2.180518 GCAAAATTAGCGCCGGCA 59.819 55.556 28.98 7.02 43.41 5.69
4338 7184 1.873572 CAGCAAAATTAGCGCCGGC 60.874 57.895 19.07 19.07 40.37 6.13
4339 7185 1.226660 CCAGCAAAATTAGCGCCGG 60.227 57.895 2.29 0.00 37.01 6.13
4340 7186 1.226660 CCCAGCAAAATTAGCGCCG 60.227 57.895 2.29 0.00 37.01 6.46
4341 7187 0.458370 CACCCAGCAAAATTAGCGCC 60.458 55.000 2.29 0.00 37.01 6.53
4342 7188 0.458370 CCACCCAGCAAAATTAGCGC 60.458 55.000 0.00 0.00 37.01 5.92
4343 7189 0.173255 CCCACCCAGCAAAATTAGCG 59.827 55.000 0.00 0.00 37.01 4.26
4344 7190 1.066929 CACCCACCCAGCAAAATTAGC 60.067 52.381 0.00 0.00 0.00 3.09
4345 7191 1.550072 CCACCCACCCAGCAAAATTAG 59.450 52.381 0.00 0.00 0.00 1.73
4346 7192 1.638529 CCACCCACCCAGCAAAATTA 58.361 50.000 0.00 0.00 0.00 1.40
4347 7193 1.126948 CCCACCCACCCAGCAAAATT 61.127 55.000 0.00 0.00 0.00 1.82
4348 7194 1.536174 CCCACCCACCCAGCAAAAT 60.536 57.895 0.00 0.00 0.00 1.82
4349 7195 2.123077 CCCACCCACCCAGCAAAA 60.123 61.111 0.00 0.00 0.00 2.44
4350 7196 4.232061 CCCCACCCACCCAGCAAA 62.232 66.667 0.00 0.00 0.00 3.68
4368 7214 3.886550 CTCCCAAACTGCCCCCACC 62.887 68.421 0.00 0.00 0.00 4.61
4369 7215 2.283173 CTCCCAAACTGCCCCCAC 60.283 66.667 0.00 0.00 0.00 4.61
4370 7216 2.399607 AACTCCCAAACTGCCCCCA 61.400 57.895 0.00 0.00 0.00 4.96
4371 7217 1.908299 CAACTCCCAAACTGCCCCC 60.908 63.158 0.00 0.00 0.00 5.40
4372 7218 1.908299 CCAACTCCCAAACTGCCCC 60.908 63.158 0.00 0.00 0.00 5.80
4373 7219 1.152546 ACCAACTCCCAAACTGCCC 60.153 57.895 0.00 0.00 0.00 5.36
4374 7220 2.041153 CACCAACTCCCAAACTGCC 58.959 57.895 0.00 0.00 0.00 4.85
4375 7221 1.363807 GCACCAACTCCCAAACTGC 59.636 57.895 0.00 0.00 0.00 4.40
4376 7222 1.101049 ACGCACCAACTCCCAAACTG 61.101 55.000 0.00 0.00 0.00 3.16
4377 7223 1.101049 CACGCACCAACTCCCAAACT 61.101 55.000 0.00 0.00 0.00 2.66
4378 7224 1.358759 CACGCACCAACTCCCAAAC 59.641 57.895 0.00 0.00 0.00 2.93
4379 7225 1.826054 CCACGCACCAACTCCCAAA 60.826 57.895 0.00 0.00 0.00 3.28
4380 7226 2.203280 CCACGCACCAACTCCCAA 60.203 61.111 0.00 0.00 0.00 4.12
4381 7227 4.263572 CCCACGCACCAACTCCCA 62.264 66.667 0.00 0.00 0.00 4.37
4382 7228 4.265056 ACCCACGCACCAACTCCC 62.265 66.667 0.00 0.00 0.00 4.30
4383 7229 2.978010 CACCCACGCACCAACTCC 60.978 66.667 0.00 0.00 0.00 3.85
4384 7230 2.978010 CCACCCACGCACCAACTC 60.978 66.667 0.00 0.00 0.00 3.01
4385 7231 4.579384 CCCACCCACGCACCAACT 62.579 66.667 0.00 0.00 0.00 3.16
4398 7244 3.938637 CTTTTCCTCCGGGGCCCAC 62.939 68.421 26.86 12.50 34.39 4.61
4399 7245 3.657350 CTTTTCCTCCGGGGCCCA 61.657 66.667 26.86 0.92 34.39 5.36
4400 7246 3.658422 ACTTTTCCTCCGGGGCCC 61.658 66.667 15.76 15.76 34.39 5.80
4401 7247 2.361230 CACTTTTCCTCCGGGGCC 60.361 66.667 0.00 0.00 34.39 5.80
4402 7248 1.377333 CTCACTTTTCCTCCGGGGC 60.377 63.158 0.00 0.00 34.39 5.80
4403 7249 1.198759 TCCTCACTTTTCCTCCGGGG 61.199 60.000 0.00 0.00 0.00 5.73
4404 7250 0.250513 CTCCTCACTTTTCCTCCGGG 59.749 60.000 0.00 0.00 0.00 5.73
4405 7251 1.205893 CTCTCCTCACTTTTCCTCCGG 59.794 57.143 0.00 0.00 0.00 5.14
4406 7252 2.165437 CTCTCTCCTCACTTTTCCTCCG 59.835 54.545 0.00 0.00 0.00 4.63
4407 7253 3.436243 TCTCTCTCCTCACTTTTCCTCC 58.564 50.000 0.00 0.00 0.00 4.30
4408 7254 4.340617 TCTCTCTCTCCTCACTTTTCCTC 58.659 47.826 0.00 0.00 0.00 3.71
4409 7255 4.202673 ACTCTCTCTCTCCTCACTTTTCCT 60.203 45.833 0.00 0.00 0.00 3.36
4410 7256 4.082245 CACTCTCTCTCTCCTCACTTTTCC 60.082 50.000 0.00 0.00 0.00 3.13
4411 7257 4.082245 CCACTCTCTCTCTCCTCACTTTTC 60.082 50.000 0.00 0.00 0.00 2.29
4412 7258 3.831911 CCACTCTCTCTCTCCTCACTTTT 59.168 47.826 0.00 0.00 0.00 2.27
4413 7259 3.430453 CCACTCTCTCTCTCCTCACTTT 58.570 50.000 0.00 0.00 0.00 2.66
4414 7260 2.291540 CCCACTCTCTCTCTCCTCACTT 60.292 54.545 0.00 0.00 0.00 3.16
4415 7261 1.284785 CCCACTCTCTCTCTCCTCACT 59.715 57.143 0.00 0.00 0.00 3.41
4416 7262 1.283613 TCCCACTCTCTCTCTCCTCAC 59.716 57.143 0.00 0.00 0.00 3.51
4417 7263 1.563879 CTCCCACTCTCTCTCTCCTCA 59.436 57.143 0.00 0.00 0.00 3.86
4418 7264 1.133792 CCTCCCACTCTCTCTCTCCTC 60.134 61.905 0.00 0.00 0.00 3.71
4419 7265 0.926293 CCTCCCACTCTCTCTCTCCT 59.074 60.000 0.00 0.00 0.00 3.69
4420 7266 0.755327 GCCTCCCACTCTCTCTCTCC 60.755 65.000 0.00 0.00 0.00 3.71
4421 7267 0.258774 AGCCTCCCACTCTCTCTCTC 59.741 60.000 0.00 0.00 0.00 3.20
4422 7268 0.033208 CAGCCTCCCACTCTCTCTCT 60.033 60.000 0.00 0.00 0.00 3.10
4423 7269 0.033601 TCAGCCTCCCACTCTCTCTC 60.034 60.000 0.00 0.00 0.00 3.20
4424 7270 0.324275 GTCAGCCTCCCACTCTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
4425 7271 1.662438 CGTCAGCCTCCCACTCTCTC 61.662 65.000 0.00 0.00 0.00 3.20
4426 7272 1.680651 CGTCAGCCTCCCACTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
4427 7273 2.716017 CCGTCAGCCTCCCACTCTC 61.716 68.421 0.00 0.00 0.00 3.20
4428 7274 2.681778 CCGTCAGCCTCCCACTCT 60.682 66.667 0.00 0.00 0.00 3.24
4429 7275 2.997897 ACCGTCAGCCTCCCACTC 60.998 66.667 0.00 0.00 0.00 3.51
4430 7276 2.997897 GACCGTCAGCCTCCCACT 60.998 66.667 0.00 0.00 0.00 4.00
4431 7277 4.436998 CGACCGTCAGCCTCCCAC 62.437 72.222 0.00 0.00 0.00 4.61
4434 7280 4.131088 GACCGACCGTCAGCCTCC 62.131 72.222 0.00 0.00 41.54 4.30
4435 7281 3.371063 TGACCGACCGTCAGCCTC 61.371 66.667 0.00 0.00 46.80 4.70
4441 7287 1.393539 CATGTCATTTGACCGACCGTC 59.606 52.381 8.16 0.00 44.15 4.79
4442 7288 1.438651 CATGTCATTTGACCGACCGT 58.561 50.000 8.16 0.00 44.15 4.83
4443 7289 0.096976 GCATGTCATTTGACCGACCG 59.903 55.000 8.16 0.00 44.15 4.79
4444 7290 1.164411 TGCATGTCATTTGACCGACC 58.836 50.000 8.16 0.00 44.15 4.79
4445 7291 2.987413 TTGCATGTCATTTGACCGAC 57.013 45.000 8.16 0.00 44.15 4.79
4446 7292 3.551863 GGTTTTGCATGTCATTTGACCGA 60.552 43.478 8.16 0.00 44.15 4.69
4447 7293 2.730928 GGTTTTGCATGTCATTTGACCG 59.269 45.455 8.16 1.25 44.15 4.79
4448 7294 2.730928 CGGTTTTGCATGTCATTTGACC 59.269 45.455 8.16 0.00 44.15 4.02
4449 7295 3.380142 ACGGTTTTGCATGTCATTTGAC 58.620 40.909 3.72 3.72 44.97 3.18
4450 7296 3.317711 AGACGGTTTTGCATGTCATTTGA 59.682 39.130 0.00 0.00 33.83 2.69
4451 7297 3.641648 AGACGGTTTTGCATGTCATTTG 58.358 40.909 0.00 0.00 33.83 2.32
4452 7298 3.569701 AGAGACGGTTTTGCATGTCATTT 59.430 39.130 0.00 0.00 33.83 2.32
4453 7299 3.149196 AGAGACGGTTTTGCATGTCATT 58.851 40.909 0.00 0.00 33.83 2.57
4454 7300 2.744202 GAGAGACGGTTTTGCATGTCAT 59.256 45.455 0.00 0.00 33.83 3.06
4455 7301 2.143122 GAGAGACGGTTTTGCATGTCA 58.857 47.619 0.00 0.00 33.83 3.58
4456 7302 2.413453 GAGAGAGACGGTTTTGCATGTC 59.587 50.000 0.00 0.00 0.00 3.06
4457 7303 2.417719 GAGAGAGACGGTTTTGCATGT 58.582 47.619 0.00 0.00 0.00 3.21
4458 7304 1.734465 GGAGAGAGACGGTTTTGCATG 59.266 52.381 0.00 0.00 0.00 4.06
4459 7305 1.625818 AGGAGAGAGACGGTTTTGCAT 59.374 47.619 0.00 0.00 0.00 3.96
4460 7306 1.048601 AGGAGAGAGACGGTTTTGCA 58.951 50.000 0.00 0.00 0.00 4.08
4461 7307 2.070028 GAAGGAGAGAGACGGTTTTGC 58.930 52.381 0.00 0.00 0.00 3.68
4462 7308 2.613223 GGGAAGGAGAGAGACGGTTTTG 60.613 54.545 0.00 0.00 0.00 2.44
4463 7309 1.624312 GGGAAGGAGAGAGACGGTTTT 59.376 52.381 0.00 0.00 0.00 2.43
4464 7310 1.268066 GGGAAGGAGAGAGACGGTTT 58.732 55.000 0.00 0.00 0.00 3.27
4465 7311 0.114560 TGGGAAGGAGAGAGACGGTT 59.885 55.000 0.00 0.00 0.00 4.44
4466 7312 0.323908 CTGGGAAGGAGAGAGACGGT 60.324 60.000 0.00 0.00 0.00 4.83
4467 7313 1.671901 GCTGGGAAGGAGAGAGACGG 61.672 65.000 0.00 0.00 0.00 4.79
4468 7314 1.813192 GCTGGGAAGGAGAGAGACG 59.187 63.158 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.