Multiple sequence alignment - TraesCS2A01G275900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G275900 chr2A 100.000 2435 0 0 1 2435 455480106 455482540 0.000000e+00 4497.0
1 TraesCS2A01G275900 chr2A 90.511 274 25 1 2116 2389 715266802 715266530 6.400000e-96 361.0
2 TraesCS2A01G275900 chr2A 96.396 111 4 0 1770 1880 391874421 391874311 1.490000e-42 183.0
3 TraesCS2A01G275900 chr2A 85.938 128 14 4 1981 2105 559080086 559079960 1.520000e-27 134.0
4 TraesCS2A01G275900 chr2B 91.607 977 35 11 837 1774 409400333 409401301 0.000000e+00 1306.0
5 TraesCS2A01G275900 chr2B 86.833 281 34 1 1 281 409399789 409400066 6.540000e-81 311.0
6 TraesCS2A01G275900 chr2B 90.756 119 11 0 1878 1996 409401300 409401418 2.510000e-35 159.0
7 TraesCS2A01G275900 chr2B 87.069 116 12 3 1878 1992 18180990 18180877 7.070000e-26 128.0
8 TraesCS2A01G275900 chr2B 87.952 83 10 0 1 83 374021449 374021367 5.540000e-17 99.0
9 TraesCS2A01G275900 chr2D 95.502 667 28 2 868 1533 344302934 344303599 0.000000e+00 1064.0
10 TraesCS2A01G275900 chr2D 93.950 281 17 0 1 281 344302292 344302572 2.240000e-115 425.0
11 TraesCS2A01G275900 chr2D 94.677 263 14 0 2127 2389 67452482 67452220 2.250000e-110 409.0
12 TraesCS2A01G275900 chr2D 90.816 294 24 3 547 837 618294484 618294777 8.160000e-105 390.0
13 TraesCS2A01G275900 chr2D 90.637 267 19 4 285 548 344302619 344302882 1.390000e-92 350.0
14 TraesCS2A01G275900 chr2D 89.958 239 7 9 1551 1774 344309935 344310171 2.370000e-75 292.0
15 TraesCS2A01G275900 chr2D 88.750 240 10 7 1551 1774 344310780 344311018 6.630000e-71 278.0
16 TraesCS2A01G275900 chr2D 90.769 130 10 2 1773 1900 382457278 382457149 3.220000e-39 172.0
17 TraesCS2A01G275900 chr2D 89.916 119 7 2 1878 1996 344310170 344310283 5.420000e-32 148.0
18 TraesCS2A01G275900 chr2D 87.903 124 12 3 1987 2108 83539722 83539600 2.520000e-30 143.0
19 TraesCS2A01G275900 chr2D 88.235 119 9 2 1878 1996 344311017 344311130 1.170000e-28 137.0
20 TraesCS2A01G275900 chr2D 90.909 88 8 0 1 88 305932403 305932316 4.250000e-23 119.0
21 TraesCS2A01G275900 chr7D 96.350 274 10 0 2116 2389 147589548 147589275 3.690000e-123 451.0
22 TraesCS2A01G275900 chr7D 92.336 274 21 0 2116 2389 500521822 500521549 8.160000e-105 390.0
23 TraesCS2A01G275900 chr7D 89.456 294 29 2 547 838 141345345 141345638 1.060000e-98 370.0
24 TraesCS2A01G275900 chr7D 88.816 304 27 7 547 846 165122877 165122577 1.380000e-97 366.0
25 TraesCS2A01G275900 chr5D 95.255 274 13 0 2116 2389 423832378 423832105 3.720000e-118 435.0
26 TraesCS2A01G275900 chr5D 90.179 112 10 1 1995 2105 538352123 538352234 7.020000e-31 145.0
27 TraesCS2A01G275900 chr1B 94.891 274 14 0 2116 2389 633307075 633307348 1.730000e-116 429.0
28 TraesCS2A01G275900 chr1B 90.068 292 27 2 548 837 484457846 484457555 6.360000e-101 377.0
29 TraesCS2A01G275900 chr1B 89.831 295 26 4 547 837 683991880 683992174 2.290000e-100 375.0
30 TraesCS2A01G275900 chr6D 94.161 274 16 0 2116 2389 472983706 472983433 3.740000e-113 418.0
31 TraesCS2A01G275900 chr6D 88.034 117 12 2 1995 2110 68842498 68842383 1.170000e-28 137.0
32 TraesCS2A01G275900 chr3D 94.161 274 16 0 2116 2389 39168294 39168567 3.740000e-113 418.0
33 TraesCS2A01G275900 chr3D 95.575 113 5 0 1769 1881 502141422 502141310 5.350000e-42 182.0
34 TraesCS2A01G275900 chr3D 86.400 125 13 4 1984 2105 87925662 87925785 1.520000e-27 134.0
35 TraesCS2A01G275900 chr3D 82.877 146 20 5 1963 2105 350786148 350786291 2.540000e-25 126.0
36 TraesCS2A01G275900 chr4D 91.781 292 24 0 549 840 21890491 21890200 8.110000e-110 407.0
37 TraesCS2A01G275900 chr7A 95.142 247 12 0 2143 2389 556568368 556568122 8.160000e-105 390.0
38 TraesCS2A01G275900 chr7A 92.000 125 9 1 1769 1892 269960316 269960440 8.950000e-40 174.0
39 TraesCS2A01G275900 chr5B 90.136 294 25 4 547 837 635258650 635258942 1.770000e-101 379.0
40 TraesCS2A01G275900 chr6A 89.333 300 31 1 547 845 36496116 36495817 2.290000e-100 375.0
41 TraesCS2A01G275900 chr3A 91.241 274 24 0 2116 2389 738821011 738820738 8.220000e-100 374.0
42 TraesCS2A01G275900 chr3A 94.017 117 7 0 1765 1881 336604527 336604643 6.920000e-41 178.0
43 TraesCS2A01G275900 chr3A 92.683 123 7 2 1759 1880 550641825 550641946 2.490000e-40 176.0
44 TraesCS2A01G275900 chr3B 87.697 317 32 6 527 837 662525552 662525867 1.780000e-96 363.0
45 TraesCS2A01G275900 chr6B 94.828 116 6 0 1766 1881 706650422 706650307 5.350000e-42 182.0
46 TraesCS2A01G275900 chr1A 94.783 115 6 0 1766 1880 339003488 339003602 1.920000e-41 180.0
47 TraesCS2A01G275900 chr5A 95.536 112 4 1 1773 1884 7007329 7007439 6.920000e-41 178.0
48 TraesCS2A01G275900 chr5A 88.793 116 12 1 1992 2106 8135078 8134963 9.080000e-30 141.0
49 TraesCS2A01G275900 chr4A 89.381 113 11 1 1995 2106 662051494 662051606 9.080000e-30 141.0
50 TraesCS2A01G275900 chr4A 86.992 123 12 3 1985 2105 586674696 586674816 4.220000e-28 135.0
51 TraesCS2A01G275900 chr7B 88.406 69 5 3 5 72 141955415 141955481 2.010000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G275900 chr2A 455480106 455482540 2434 False 4497.00 4497 100.00000 1 2435 1 chr2A.!!$F1 2434
1 TraesCS2A01G275900 chr2B 409399789 409401418 1629 False 592.00 1306 89.73200 1 1996 3 chr2B.!!$F1 1995
2 TraesCS2A01G275900 chr2D 344302292 344303599 1307 False 613.00 1064 93.36300 1 1533 3 chr2D.!!$F2 1532
3 TraesCS2A01G275900 chr2D 344309935 344311130 1195 False 213.75 292 89.21475 1551 1996 4 chr2D.!!$F3 445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
825 876 0.025513 GAGCGCTTGCGTCTGTATTG 59.974 55.0 13.26 0.0 45.69 1.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2109 3084 0.112412 GGCGGGGATGTGGGATTTAT 59.888 55.0 0.0 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 2.540265 TTGCGGCCATGTTTCAAAAT 57.460 40.000 2.24 0.00 0.00 1.82
115 116 6.406849 GGCCATGTTTCAAAATTAGGCTATGA 60.407 38.462 0.00 0.00 40.61 2.15
133 134 2.161855 TGATTTAAGCTGCTGTGGGTG 58.838 47.619 1.35 0.00 0.00 4.61
201 202 1.139853 GAAGAGATCGGCCAGGTGAAT 59.860 52.381 2.24 0.00 0.00 2.57
214 215 2.093973 CAGGTGAATACAAGCGTCTCCT 60.094 50.000 0.00 0.00 36.04 3.69
251 252 5.893824 ACCTGAACATCTCCCCAATAATTTC 59.106 40.000 0.00 0.00 0.00 2.17
281 282 0.744281 AGTTTTCACGCCCTTGTTGG 59.256 50.000 0.00 0.00 0.00 3.77
411 455 2.495270 AGTTGACGAGCATGACAGATCT 59.505 45.455 0.00 0.00 0.00 2.75
435 479 7.875041 TCTGACTCAGTTCATTTTTCTTCTAGG 59.125 37.037 5.94 0.00 32.61 3.02
444 488 7.537596 TCATTTTTCTTCTAGGAAATTGCCA 57.462 32.000 4.92 0.00 35.51 4.92
463 507 3.848726 CCATGCTCGCCAACTAAATTTT 58.151 40.909 0.00 0.00 0.00 1.82
488 532 8.862325 TTCATCCTCACGCCAATATAAATTAT 57.138 30.769 0.00 0.00 0.00 1.28
533 584 8.791675 TGTCATGCATAAAAGTTTAACATCAGA 58.208 29.630 0.00 0.00 0.00 3.27
534 585 9.793252 GTCATGCATAAAAGTTTAACATCAGAT 57.207 29.630 0.00 0.00 0.00 2.90
550 601 8.757982 AACATCAGATATTTAGCATTTCCTGT 57.242 30.769 0.00 0.00 0.00 4.00
551 602 8.162878 ACATCAGATATTTAGCATTTCCTGTG 57.837 34.615 0.00 0.00 0.00 3.66
552 603 7.230108 ACATCAGATATTTAGCATTTCCTGTGG 59.770 37.037 0.00 0.00 0.00 4.17
553 604 6.662755 TCAGATATTTAGCATTTCCTGTGGT 58.337 36.000 0.00 0.00 0.00 4.16
554 605 7.118723 TCAGATATTTAGCATTTCCTGTGGTT 58.881 34.615 0.00 0.00 0.00 3.67
555 606 7.067372 TCAGATATTTAGCATTTCCTGTGGTTG 59.933 37.037 0.00 0.00 0.00 3.77
556 607 7.067372 CAGATATTTAGCATTTCCTGTGGTTGA 59.933 37.037 0.00 0.00 0.00 3.18
557 608 7.615365 AGATATTTAGCATTTCCTGTGGTTGAA 59.385 33.333 0.00 0.00 0.00 2.69
558 609 6.610075 ATTTAGCATTTCCTGTGGTTGAAT 57.390 33.333 0.00 0.00 0.00 2.57
559 610 3.947910 AGCATTTCCTGTGGTTGAATG 57.052 42.857 0.00 0.00 0.00 2.67
560 611 2.564062 AGCATTTCCTGTGGTTGAATGG 59.436 45.455 0.00 0.00 0.00 3.16
561 612 2.299867 GCATTTCCTGTGGTTGAATGGT 59.700 45.455 0.00 0.00 0.00 3.55
562 613 3.244181 GCATTTCCTGTGGTTGAATGGTT 60.244 43.478 0.00 0.00 0.00 3.67
563 614 4.021544 GCATTTCCTGTGGTTGAATGGTTA 60.022 41.667 0.00 0.00 0.00 2.85
564 615 5.713025 CATTTCCTGTGGTTGAATGGTTAG 58.287 41.667 0.00 0.00 0.00 2.34
565 616 4.715534 TTCCTGTGGTTGAATGGTTAGA 57.284 40.909 0.00 0.00 0.00 2.10
566 617 4.286297 TCCTGTGGTTGAATGGTTAGAG 57.714 45.455 0.00 0.00 0.00 2.43
567 618 3.009033 TCCTGTGGTTGAATGGTTAGAGG 59.991 47.826 0.00 0.00 0.00 3.69
568 619 3.347216 CTGTGGTTGAATGGTTAGAGGG 58.653 50.000 0.00 0.00 0.00 4.30
569 620 2.983192 TGTGGTTGAATGGTTAGAGGGA 59.017 45.455 0.00 0.00 0.00 4.20
570 621 3.591527 TGTGGTTGAATGGTTAGAGGGAT 59.408 43.478 0.00 0.00 0.00 3.85
571 622 4.044065 TGTGGTTGAATGGTTAGAGGGATT 59.956 41.667 0.00 0.00 0.00 3.01
572 623 4.399303 GTGGTTGAATGGTTAGAGGGATTG 59.601 45.833 0.00 0.00 0.00 2.67
573 624 4.044065 TGGTTGAATGGTTAGAGGGATTGT 59.956 41.667 0.00 0.00 0.00 2.71
574 625 4.399303 GGTTGAATGGTTAGAGGGATTGTG 59.601 45.833 0.00 0.00 0.00 3.33
575 626 4.235079 TGAATGGTTAGAGGGATTGTGG 57.765 45.455 0.00 0.00 0.00 4.17
576 627 3.591527 TGAATGGTTAGAGGGATTGTGGT 59.408 43.478 0.00 0.00 0.00 4.16
577 628 4.785914 TGAATGGTTAGAGGGATTGTGGTA 59.214 41.667 0.00 0.00 0.00 3.25
578 629 5.431731 TGAATGGTTAGAGGGATTGTGGTAT 59.568 40.000 0.00 0.00 0.00 2.73
579 630 5.568620 ATGGTTAGAGGGATTGTGGTATC 57.431 43.478 0.00 0.00 0.00 2.24
580 631 3.714798 TGGTTAGAGGGATTGTGGTATCC 59.285 47.826 0.00 0.00 42.84 2.59
587 638 1.703513 GGATTGTGGTATCCCTACCCC 59.296 57.143 0.00 0.00 46.01 4.95
588 639 2.414612 GATTGTGGTATCCCTACCCCA 58.585 52.381 0.00 0.00 46.01 4.96
589 640 1.587066 TTGTGGTATCCCTACCCCAC 58.413 55.000 0.00 0.00 46.01 4.61
590 641 0.326808 TGTGGTATCCCTACCCCACC 60.327 60.000 5.31 0.00 46.01 4.61
591 642 0.326808 GTGGTATCCCTACCCCACCA 60.327 60.000 0.00 0.00 46.01 4.17
592 643 0.422313 TGGTATCCCTACCCCACCAA 59.578 55.000 0.00 0.00 46.01 3.67
593 644 1.137697 GGTATCCCTACCCCACCAAG 58.862 60.000 0.00 0.00 41.50 3.61
594 645 1.344701 GGTATCCCTACCCCACCAAGA 60.345 57.143 0.00 0.00 41.50 3.02
595 646 2.699281 GGTATCCCTACCCCACCAAGAT 60.699 54.545 0.00 0.00 41.50 2.40
596 647 2.303660 ATCCCTACCCCACCAAGATT 57.696 50.000 0.00 0.00 0.00 2.40
597 648 1.591768 TCCCTACCCCACCAAGATTC 58.408 55.000 0.00 0.00 0.00 2.52
598 649 1.203505 TCCCTACCCCACCAAGATTCA 60.204 52.381 0.00 0.00 0.00 2.57
599 650 1.852965 CCCTACCCCACCAAGATTCAT 59.147 52.381 0.00 0.00 0.00 2.57
600 651 2.423373 CCCTACCCCACCAAGATTCATG 60.423 54.545 0.00 0.00 0.00 3.07
601 652 2.242196 CCTACCCCACCAAGATTCATGT 59.758 50.000 0.00 0.00 0.00 3.21
602 653 2.514458 ACCCCACCAAGATTCATGTC 57.486 50.000 0.00 0.00 0.00 3.06
603 654 1.005924 ACCCCACCAAGATTCATGTCC 59.994 52.381 0.00 0.00 0.00 4.02
604 655 1.686115 CCCCACCAAGATTCATGTCCC 60.686 57.143 0.00 0.00 0.00 4.46
605 656 1.382522 CCACCAAGATTCATGTCCCG 58.617 55.000 0.00 0.00 0.00 5.14
606 657 1.382522 CACCAAGATTCATGTCCCGG 58.617 55.000 0.00 0.00 0.00 5.73
607 658 0.991920 ACCAAGATTCATGTCCCGGT 59.008 50.000 0.00 0.00 0.00 5.28
608 659 1.340017 ACCAAGATTCATGTCCCGGTG 60.340 52.381 0.00 0.00 0.00 4.94
609 660 0.734889 CAAGATTCATGTCCCGGTGC 59.265 55.000 0.00 0.00 0.00 5.01
610 661 0.620556 AAGATTCATGTCCCGGTGCT 59.379 50.000 0.00 0.00 0.00 4.40
611 662 0.179000 AGATTCATGTCCCGGTGCTC 59.821 55.000 0.00 0.00 0.00 4.26
612 663 1.153369 ATTCATGTCCCGGTGCTCG 60.153 57.895 0.00 0.00 38.88 5.03
613 664 3.950794 TTCATGTCCCGGTGCTCGC 62.951 63.158 0.00 0.00 37.59 5.03
614 665 4.758251 CATGTCCCGGTGCTCGCA 62.758 66.667 0.00 0.00 37.59 5.10
615 666 3.785859 ATGTCCCGGTGCTCGCAT 61.786 61.111 0.00 0.00 37.59 4.73
616 667 3.329542 ATGTCCCGGTGCTCGCATT 62.330 57.895 0.00 0.00 37.59 3.56
617 668 2.746277 GTCCCGGTGCTCGCATTT 60.746 61.111 0.00 0.00 37.59 2.32
618 669 1.448893 GTCCCGGTGCTCGCATTTA 60.449 57.895 0.00 0.00 37.59 1.40
619 670 0.814010 GTCCCGGTGCTCGCATTTAT 60.814 55.000 0.00 0.00 37.59 1.40
620 671 0.107410 TCCCGGTGCTCGCATTTATT 60.107 50.000 0.00 0.00 37.59 1.40
621 672 0.307760 CCCGGTGCTCGCATTTATTC 59.692 55.000 0.00 0.00 37.59 1.75
622 673 0.307760 CCGGTGCTCGCATTTATTCC 59.692 55.000 0.00 0.00 37.59 3.01
623 674 1.299541 CGGTGCTCGCATTTATTCCT 58.700 50.000 0.00 0.00 0.00 3.36
624 675 1.003545 CGGTGCTCGCATTTATTCCTG 60.004 52.381 0.00 0.00 0.00 3.86
625 676 1.268743 GGTGCTCGCATTTATTCCTGC 60.269 52.381 0.00 0.00 35.02 4.85
626 677 1.401552 GTGCTCGCATTTATTCCTGCA 59.598 47.619 0.00 0.00 38.30 4.41
627 678 2.033801 GTGCTCGCATTTATTCCTGCAT 59.966 45.455 0.00 0.00 38.30 3.96
628 679 2.689471 TGCTCGCATTTATTCCTGCATT 59.311 40.909 0.00 0.00 38.30 3.56
629 680 3.130869 TGCTCGCATTTATTCCTGCATTT 59.869 39.130 0.00 0.00 38.30 2.32
630 681 4.337836 TGCTCGCATTTATTCCTGCATTTA 59.662 37.500 0.00 0.00 38.30 1.40
631 682 5.009911 TGCTCGCATTTATTCCTGCATTTAT 59.990 36.000 0.00 0.00 38.30 1.40
632 683 5.922544 GCTCGCATTTATTCCTGCATTTATT 59.077 36.000 0.00 0.00 38.30 1.40
633 684 6.421801 GCTCGCATTTATTCCTGCATTTATTT 59.578 34.615 0.00 0.00 38.30 1.40
634 685 7.358683 GCTCGCATTTATTCCTGCATTTATTTC 60.359 37.037 0.00 0.00 38.30 2.17
635 686 7.487484 TCGCATTTATTCCTGCATTTATTTCA 58.513 30.769 0.00 0.00 38.30 2.69
636 687 7.648908 TCGCATTTATTCCTGCATTTATTTCAG 59.351 33.333 0.00 0.00 38.30 3.02
637 688 7.095940 CGCATTTATTCCTGCATTTATTTCAGG 60.096 37.037 1.29 1.29 46.60 3.86
645 696 5.261209 TGCATTTATTTCAGGATTTCCGG 57.739 39.130 0.00 0.00 42.08 5.14
646 697 4.051237 GCATTTATTTCAGGATTTCCGGC 58.949 43.478 0.00 0.00 42.08 6.13
647 698 4.290155 CATTTATTTCAGGATTTCCGGCG 58.710 43.478 0.00 0.00 42.08 6.46
648 699 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
649 700 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
650 701 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
651 702 0.251916 TTCAGGATTTCCGGCGATGT 59.748 50.000 9.30 0.00 42.08 3.06
652 703 0.461870 TCAGGATTTCCGGCGATGTG 60.462 55.000 9.30 0.00 42.08 3.21
653 704 1.819632 AGGATTTCCGGCGATGTGC 60.820 57.895 9.30 0.00 42.08 4.57
663 714 1.430632 GCGATGTGCATTCAGTGGG 59.569 57.895 0.00 0.00 45.45 4.61
664 715 1.026182 GCGATGTGCATTCAGTGGGA 61.026 55.000 0.00 0.00 45.45 4.37
665 716 1.012086 CGATGTGCATTCAGTGGGAG 58.988 55.000 0.00 0.00 0.00 4.30
666 717 1.386533 GATGTGCATTCAGTGGGAGG 58.613 55.000 0.00 0.00 0.00 4.30
667 718 0.994247 ATGTGCATTCAGTGGGAGGA 59.006 50.000 0.00 0.00 0.00 3.71
668 719 0.325933 TGTGCATTCAGTGGGAGGAG 59.674 55.000 0.00 0.00 0.00 3.69
669 720 0.615331 GTGCATTCAGTGGGAGGAGA 59.385 55.000 0.00 0.00 0.00 3.71
670 721 0.615331 TGCATTCAGTGGGAGGAGAC 59.385 55.000 0.00 0.00 0.00 3.36
671 722 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
672 723 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
673 724 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
674 725 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
695 746 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
696 747 1.450848 TCGACGACGAGGTGCCTAT 60.451 57.895 5.75 0.00 43.81 2.57
697 748 1.298413 CGACGACGAGGTGCCTATG 60.298 63.158 0.00 0.00 42.66 2.23
698 749 1.065928 GACGACGAGGTGCCTATGG 59.934 63.158 0.00 0.00 0.00 2.74
699 750 1.664321 GACGACGAGGTGCCTATGGT 61.664 60.000 0.00 0.00 0.00 3.55
700 751 1.226974 CGACGAGGTGCCTATGGTG 60.227 63.158 0.00 0.00 0.00 4.17
701 752 1.663379 CGACGAGGTGCCTATGGTGA 61.663 60.000 0.00 0.00 0.00 4.02
702 753 0.179108 GACGAGGTGCCTATGGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
703 754 0.614979 ACGAGGTGCCTATGGTGACT 60.615 55.000 0.00 0.00 0.00 3.41
704 755 0.537188 CGAGGTGCCTATGGTGACTT 59.463 55.000 0.00 0.00 0.00 3.01
705 756 1.471676 CGAGGTGCCTATGGTGACTTC 60.472 57.143 0.00 0.00 0.00 3.01
706 757 0.537188 AGGTGCCTATGGTGACTTCG 59.463 55.000 0.00 0.00 0.00 3.79
707 758 0.249398 GGTGCCTATGGTGACTTCGT 59.751 55.000 0.00 0.00 0.00 3.85
708 759 1.479323 GGTGCCTATGGTGACTTCGTA 59.521 52.381 0.00 0.00 0.00 3.43
709 760 2.093869 GGTGCCTATGGTGACTTCGTAA 60.094 50.000 0.00 0.00 0.00 3.18
710 761 3.592059 GTGCCTATGGTGACTTCGTAAA 58.408 45.455 0.00 0.00 0.00 2.01
711 762 4.189231 GTGCCTATGGTGACTTCGTAAAT 58.811 43.478 0.00 0.00 0.00 1.40
712 763 4.634443 GTGCCTATGGTGACTTCGTAAATT 59.366 41.667 0.00 0.00 0.00 1.82
713 764 5.123344 GTGCCTATGGTGACTTCGTAAATTT 59.877 40.000 0.00 0.00 0.00 1.82
714 765 5.353123 TGCCTATGGTGACTTCGTAAATTTC 59.647 40.000 0.00 0.00 0.00 2.17
715 766 5.353123 GCCTATGGTGACTTCGTAAATTTCA 59.647 40.000 0.00 0.00 0.00 2.69
716 767 6.128117 GCCTATGGTGACTTCGTAAATTTCAA 60.128 38.462 0.00 0.00 0.00 2.69
717 768 7.574217 GCCTATGGTGACTTCGTAAATTTCAAA 60.574 37.037 0.00 0.00 0.00 2.69
718 769 8.293867 CCTATGGTGACTTCGTAAATTTCAAAA 58.706 33.333 0.00 0.00 0.00 2.44
719 770 9.840427 CTATGGTGACTTCGTAAATTTCAAAAT 57.160 29.630 0.00 0.00 0.00 1.82
720 771 7.922505 TGGTGACTTCGTAAATTTCAAAATG 57.077 32.000 0.00 0.00 0.00 2.32
721 772 7.708051 TGGTGACTTCGTAAATTTCAAAATGA 58.292 30.769 0.00 0.00 0.00 2.57
722 773 8.356657 TGGTGACTTCGTAAATTTCAAAATGAT 58.643 29.630 0.00 0.00 0.00 2.45
723 774 9.834628 GGTGACTTCGTAAATTTCAAAATGATA 57.165 29.630 0.00 0.00 0.00 2.15
727 778 9.353999 ACTTCGTAAATTTCAAAATGATAAGCC 57.646 29.630 0.00 0.00 0.00 4.35
728 779 7.962934 TCGTAAATTTCAAAATGATAAGCCG 57.037 32.000 0.00 0.00 0.00 5.52
729 780 6.970043 TCGTAAATTTCAAAATGATAAGCCGG 59.030 34.615 0.00 0.00 0.00 6.13
730 781 6.291585 CGTAAATTTCAAAATGATAAGCCGGC 60.292 38.462 21.89 21.89 0.00 6.13
731 782 5.343307 AATTTCAAAATGATAAGCCGGCT 57.657 34.783 27.08 27.08 0.00 5.52
732 783 4.370364 TTTCAAAATGATAAGCCGGCTC 57.630 40.909 32.93 18.99 0.00 4.70
733 784 2.997980 TCAAAATGATAAGCCGGCTCA 58.002 42.857 32.93 24.57 0.00 4.26
734 785 2.945008 TCAAAATGATAAGCCGGCTCAG 59.055 45.455 32.93 11.85 0.00 3.35
735 786 2.684881 CAAAATGATAAGCCGGCTCAGT 59.315 45.455 32.93 20.65 0.00 3.41
736 787 3.838244 AAATGATAAGCCGGCTCAGTA 57.162 42.857 32.93 19.78 0.00 2.74
737 788 4.357918 AAATGATAAGCCGGCTCAGTAT 57.642 40.909 32.93 23.91 0.00 2.12
738 789 4.357918 AATGATAAGCCGGCTCAGTATT 57.642 40.909 32.93 23.48 0.00 1.89
739 790 3.838244 TGATAAGCCGGCTCAGTATTT 57.162 42.857 32.93 15.33 0.00 1.40
740 791 3.728845 TGATAAGCCGGCTCAGTATTTC 58.271 45.455 32.93 18.23 0.00 2.17
741 792 2.218953 TAAGCCGGCTCAGTATTTCG 57.781 50.000 32.93 0.00 0.00 3.46
742 793 0.462047 AAGCCGGCTCAGTATTTCGG 60.462 55.000 32.93 0.00 43.13 4.30
743 794 1.143183 GCCGGCTCAGTATTTCGGA 59.857 57.895 22.15 0.00 42.94 4.55
744 795 0.876342 GCCGGCTCAGTATTTCGGAG 60.876 60.000 22.15 0.00 42.94 4.63
745 796 0.249489 CCGGCTCAGTATTTCGGAGG 60.249 60.000 0.00 0.00 42.94 4.30
746 797 0.460311 CGGCTCAGTATTTCGGAGGT 59.540 55.000 0.00 0.00 38.48 3.85
747 798 1.802880 CGGCTCAGTATTTCGGAGGTG 60.803 57.143 0.00 0.00 38.48 4.00
748 799 1.291132 GCTCAGTATTTCGGAGGTGC 58.709 55.000 0.00 0.00 38.48 5.01
749 800 1.134670 GCTCAGTATTTCGGAGGTGCT 60.135 52.381 0.00 0.00 38.48 4.40
750 801 2.815478 CTCAGTATTTCGGAGGTGCTC 58.185 52.381 0.00 0.00 35.32 4.26
751 802 2.166459 CTCAGTATTTCGGAGGTGCTCA 59.834 50.000 0.00 0.00 35.32 4.26
752 803 2.766263 TCAGTATTTCGGAGGTGCTCAT 59.234 45.455 0.00 0.00 31.08 2.90
753 804 3.958147 TCAGTATTTCGGAGGTGCTCATA 59.042 43.478 0.00 0.00 31.08 2.15
754 805 4.051922 CAGTATTTCGGAGGTGCTCATAC 58.948 47.826 0.00 0.00 31.08 2.39
755 806 2.225068 ATTTCGGAGGTGCTCATACG 57.775 50.000 0.00 0.00 31.08 3.06
756 807 0.892755 TTTCGGAGGTGCTCATACGT 59.107 50.000 4.86 0.00 31.08 3.57
757 808 1.753930 TTCGGAGGTGCTCATACGTA 58.246 50.000 4.86 0.00 31.08 3.57
758 809 1.977056 TCGGAGGTGCTCATACGTAT 58.023 50.000 1.14 1.14 31.08 3.06
759 810 3.130280 TCGGAGGTGCTCATACGTATA 57.870 47.619 7.96 0.00 31.08 1.47
760 811 3.072211 TCGGAGGTGCTCATACGTATAG 58.928 50.000 7.96 7.57 31.08 1.31
761 812 2.812591 CGGAGGTGCTCATACGTATAGT 59.187 50.000 7.96 0.00 31.08 2.12
762 813 3.365064 CGGAGGTGCTCATACGTATAGTG 60.365 52.174 7.96 0.00 31.08 2.74
763 814 3.568853 GGAGGTGCTCATACGTATAGTGT 59.431 47.826 7.96 0.00 31.08 3.55
764 815 4.537965 GAGGTGCTCATACGTATAGTGTG 58.462 47.826 7.96 0.14 42.45 3.82
765 816 3.952323 AGGTGCTCATACGTATAGTGTGT 59.048 43.478 7.96 0.00 41.87 3.72
766 817 4.042398 GGTGCTCATACGTATAGTGTGTG 58.958 47.826 7.96 0.00 41.87 3.82
768 819 2.719556 GCTCATACGTATAGTGTGTGCG 59.280 50.000 7.96 0.00 46.00 5.34
769 820 3.791122 GCTCATACGTATAGTGTGTGCGT 60.791 47.826 7.96 0.00 46.00 5.24
770 821 3.687200 TCATACGTATAGTGTGTGCGTG 58.313 45.455 7.96 0.00 41.87 5.34
771 822 3.127376 TCATACGTATAGTGTGTGCGTGT 59.873 43.478 7.96 0.00 41.87 4.49
772 823 1.693467 ACGTATAGTGTGTGCGTGTG 58.307 50.000 0.00 0.00 34.36 3.82
773 824 1.001048 ACGTATAGTGTGTGCGTGTGT 60.001 47.619 0.00 0.00 34.36 3.72
774 825 1.385409 CGTATAGTGTGTGCGTGTGTG 59.615 52.381 0.00 0.00 0.00 3.82
775 826 2.400399 GTATAGTGTGTGCGTGTGTGT 58.600 47.619 0.00 0.00 0.00 3.72
776 827 1.948104 ATAGTGTGTGCGTGTGTGTT 58.052 45.000 0.00 0.00 0.00 3.32
777 828 1.728068 TAGTGTGTGCGTGTGTGTTT 58.272 45.000 0.00 0.00 0.00 2.83
778 829 1.728068 AGTGTGTGCGTGTGTGTTTA 58.272 45.000 0.00 0.00 0.00 2.01
779 830 2.285083 AGTGTGTGCGTGTGTGTTTAT 58.715 42.857 0.00 0.00 0.00 1.40
780 831 3.459145 AGTGTGTGCGTGTGTGTTTATA 58.541 40.909 0.00 0.00 0.00 0.98
781 832 3.493129 AGTGTGTGCGTGTGTGTTTATAG 59.507 43.478 0.00 0.00 0.00 1.31
782 833 2.803386 TGTGTGCGTGTGTGTTTATAGG 59.197 45.455 0.00 0.00 0.00 2.57
783 834 2.158841 GTGTGCGTGTGTGTTTATAGGG 59.841 50.000 0.00 0.00 0.00 3.53
784 835 1.735571 GTGCGTGTGTGTTTATAGGGG 59.264 52.381 0.00 0.00 0.00 4.79
785 836 1.348366 TGCGTGTGTGTTTATAGGGGT 59.652 47.619 0.00 0.00 0.00 4.95
786 837 1.735571 GCGTGTGTGTTTATAGGGGTG 59.264 52.381 0.00 0.00 0.00 4.61
787 838 2.613474 GCGTGTGTGTTTATAGGGGTGA 60.613 50.000 0.00 0.00 0.00 4.02
788 839 3.259064 CGTGTGTGTTTATAGGGGTGAG 58.741 50.000 0.00 0.00 0.00 3.51
789 840 3.306502 CGTGTGTGTTTATAGGGGTGAGT 60.307 47.826 0.00 0.00 0.00 3.41
790 841 4.000988 GTGTGTGTTTATAGGGGTGAGTG 58.999 47.826 0.00 0.00 0.00 3.51
791 842 3.649023 TGTGTGTTTATAGGGGTGAGTGT 59.351 43.478 0.00 0.00 0.00 3.55
792 843 4.839550 TGTGTGTTTATAGGGGTGAGTGTA 59.160 41.667 0.00 0.00 0.00 2.90
793 844 5.486063 TGTGTGTTTATAGGGGTGAGTGTAT 59.514 40.000 0.00 0.00 0.00 2.29
794 845 5.815740 GTGTGTTTATAGGGGTGAGTGTATG 59.184 44.000 0.00 0.00 0.00 2.39
795 846 4.814771 GTGTTTATAGGGGTGAGTGTATGC 59.185 45.833 0.00 0.00 0.00 3.14
796 847 4.056050 GTTTATAGGGGTGAGTGTATGCG 58.944 47.826 0.00 0.00 0.00 4.73
797 848 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
798 849 0.973496 TAGGGGTGAGTGTATGCGCA 60.973 55.000 14.96 14.96 0.00 6.09
799 850 1.153168 GGGGTGAGTGTATGCGCAT 60.153 57.895 28.23 28.23 0.00 4.73
800 851 1.439353 GGGGTGAGTGTATGCGCATG 61.439 60.000 32.48 0.00 0.00 4.06
801 852 0.744414 GGGTGAGTGTATGCGCATGT 60.744 55.000 32.48 11.40 0.00 3.21
802 853 1.472552 GGGTGAGTGTATGCGCATGTA 60.473 52.381 32.48 17.97 0.00 2.29
803 854 2.483876 GGTGAGTGTATGCGCATGTAT 58.516 47.619 32.48 15.41 0.00 2.29
804 855 3.554129 GGGTGAGTGTATGCGCATGTATA 60.554 47.826 32.48 10.12 0.00 1.47
805 856 3.428870 GGTGAGTGTATGCGCATGTATAC 59.571 47.826 32.48 22.08 42.15 1.47
806 857 3.119628 GTGAGTGTATGCGCATGTATACG 59.880 47.826 32.48 0.00 44.00 3.06
807 858 3.003897 TGAGTGTATGCGCATGTATACGA 59.996 43.478 32.48 8.02 44.00 3.43
808 859 3.565516 AGTGTATGCGCATGTATACGAG 58.434 45.455 32.48 0.00 44.00 4.18
809 860 2.090658 GTGTATGCGCATGTATACGAGC 59.909 50.000 32.48 12.50 44.00 5.03
812 863 4.228451 CGCATGTATACGAGCGCT 57.772 55.556 22.84 11.27 43.80 5.92
813 864 2.506544 CGCATGTATACGAGCGCTT 58.493 52.632 22.84 0.00 43.80 4.68
814 865 0.159554 CGCATGTATACGAGCGCTTG 59.840 55.000 23.34 23.34 43.80 4.01
815 866 0.111089 GCATGTATACGAGCGCTTGC 60.111 55.000 24.80 17.18 39.58 4.01
816 867 0.159554 CATGTATACGAGCGCTTGCG 59.840 55.000 24.80 20.18 45.69 4.85
817 868 0.248907 ATGTATACGAGCGCTTGCGT 60.249 50.000 24.68 24.68 45.69 5.24
818 869 0.864377 TGTATACGAGCGCTTGCGTC 60.864 55.000 24.96 13.22 45.69 5.19
819 870 0.591741 GTATACGAGCGCTTGCGTCT 60.592 55.000 24.96 18.45 45.69 4.18
820 871 0.591488 TATACGAGCGCTTGCGTCTG 60.591 55.000 24.96 6.42 45.69 3.51
821 872 2.543687 ATACGAGCGCTTGCGTCTGT 62.544 55.000 24.96 11.65 45.69 3.41
822 873 1.914531 TACGAGCGCTTGCGTCTGTA 61.915 55.000 24.96 7.49 45.69 2.74
823 874 1.874019 CGAGCGCTTGCGTCTGTAT 60.874 57.895 13.26 0.00 45.69 2.29
824 875 1.413767 CGAGCGCTTGCGTCTGTATT 61.414 55.000 13.26 0.00 45.69 1.89
825 876 0.025513 GAGCGCTTGCGTCTGTATTG 59.974 55.000 13.26 0.00 45.69 1.90
826 877 0.670546 AGCGCTTGCGTCTGTATTGT 60.671 50.000 16.38 0.00 45.69 2.71
827 878 0.519175 GCGCTTGCGTCTGTATTGTG 60.519 55.000 16.38 0.00 0.00 3.33
828 879 0.790207 CGCTTGCGTCTGTATTGTGT 59.210 50.000 6.86 0.00 0.00 3.72
829 880 1.194547 CGCTTGCGTCTGTATTGTGTT 59.805 47.619 6.86 0.00 0.00 3.32
830 881 2.410392 CGCTTGCGTCTGTATTGTGTTA 59.590 45.455 6.86 0.00 0.00 2.41
831 882 3.120820 CGCTTGCGTCTGTATTGTGTTAA 60.121 43.478 6.86 0.00 0.00 2.01
832 883 4.609559 CGCTTGCGTCTGTATTGTGTTAAA 60.610 41.667 6.86 0.00 0.00 1.52
833 884 5.209240 GCTTGCGTCTGTATTGTGTTAAAA 58.791 37.500 0.00 0.00 0.00 1.52
834 885 5.683743 GCTTGCGTCTGTATTGTGTTAAAAA 59.316 36.000 0.00 0.00 0.00 1.94
871 964 7.931578 TTCCATTTGTAATCGTTGATAACCT 57.068 32.000 0.00 0.00 0.00 3.50
872 965 7.548196 TCCATTTGTAATCGTTGATAACCTC 57.452 36.000 0.00 0.00 0.00 3.85
873 966 7.335627 TCCATTTGTAATCGTTGATAACCTCT 58.664 34.615 0.00 0.00 0.00 3.69
874 967 7.827236 TCCATTTGTAATCGTTGATAACCTCTT 59.173 33.333 0.00 0.00 0.00 2.85
875 968 9.104965 CCATTTGTAATCGTTGATAACCTCTTA 57.895 33.333 0.00 0.00 0.00 2.10
877 970 7.766219 TTGTAATCGTTGATAACCTCTTAGC 57.234 36.000 0.00 0.00 0.00 3.09
989 1097 0.850100 TGTCCCTTCCCAACACACAT 59.150 50.000 0.00 0.00 0.00 3.21
1003 1111 7.285629 TCCCAACACACATAACTACAAAAATGA 59.714 33.333 0.00 0.00 0.00 2.57
1044 1152 1.156322 TCCCCTGTCTCCTCCTCCTT 61.156 60.000 0.00 0.00 0.00 3.36
1233 1341 0.814010 GCAGACCAGTCAACAACGGT 60.814 55.000 0.00 0.00 37.44 4.83
1257 1365 2.574399 GTCCAGGTCCAGCTCGTC 59.426 66.667 0.00 0.00 0.00 4.20
1262 1370 0.534412 CAGGTCCAGCTCGTCTTCAT 59.466 55.000 0.00 0.00 0.00 2.57
1495 1603 2.493675 TGCAGGTTTTGTGCTGTTGTTA 59.506 40.909 0.00 0.00 41.78 2.41
1503 1611 5.994887 TTTGTGCTGTTGTTATTACTCGT 57.005 34.783 0.00 0.00 0.00 4.18
1515 1623 7.861176 TGTTATTACTCGTTTGCATTTTTCC 57.139 32.000 0.00 0.00 0.00 3.13
1533 1642 5.471556 TTTCCCGTCACTTGAGTATGTAA 57.528 39.130 0.00 0.00 0.00 2.41
1534 1643 4.445452 TCCCGTCACTTGAGTATGTAAC 57.555 45.455 0.00 0.00 0.00 2.50
1570 1688 5.459107 CGTGGTTACAGCATGAACTAGTATC 59.541 44.000 0.00 0.00 39.69 2.24
1600 1718 2.701073 ACTTACGCGAGGATTATCGG 57.299 50.000 15.93 0.00 42.94 4.18
1624 1742 2.757896 CGTACGCATGTGTGATGTTTC 58.242 47.619 22.00 3.16 0.00 2.78
1772 1905 5.063817 GCGTAACAACGGGTACAAATATTCT 59.936 40.000 0.00 0.00 0.00 2.40
1773 1906 6.255453 GCGTAACAACGGGTACAAATATTCTA 59.745 38.462 0.00 0.00 0.00 2.10
1774 1907 7.612266 CGTAACAACGGGTACAAATATTCTAC 58.388 38.462 0.00 0.00 0.00 2.59
1775 1908 7.489113 CGTAACAACGGGTACAAATATTCTACT 59.511 37.037 0.00 0.00 0.00 2.57
1776 1909 7.838771 AACAACGGGTACAAATATTCTACTC 57.161 36.000 0.00 0.00 0.00 2.59
1777 1910 6.343703 ACAACGGGTACAAATATTCTACTCC 58.656 40.000 0.00 0.00 0.00 3.85
1778 1911 5.541953 ACGGGTACAAATATTCTACTCCC 57.458 43.478 0.00 0.00 0.00 4.30
1779 1912 5.214293 ACGGGTACAAATATTCTACTCCCT 58.786 41.667 0.00 1.24 0.00 4.20
1780 1913 5.303845 ACGGGTACAAATATTCTACTCCCTC 59.696 44.000 0.00 0.00 0.00 4.30
1781 1914 5.279356 CGGGTACAAATATTCTACTCCCTCC 60.279 48.000 0.00 0.00 0.00 4.30
1782 1915 5.605488 GGGTACAAATATTCTACTCCCTCCA 59.395 44.000 0.00 0.00 0.00 3.86
1783 1916 6.272558 GGGTACAAATATTCTACTCCCTCCAT 59.727 42.308 0.00 0.00 0.00 3.41
1784 1917 7.202195 GGGTACAAATATTCTACTCCCTCCATT 60.202 40.741 0.00 0.00 0.00 3.16
1785 1918 7.878644 GGTACAAATATTCTACTCCCTCCATTC 59.121 40.741 0.00 0.00 0.00 2.67
1786 1919 6.842676 ACAAATATTCTACTCCCTCCATTCC 58.157 40.000 0.00 0.00 0.00 3.01
1787 1920 5.746990 AATATTCTACTCCCTCCATTCCG 57.253 43.478 0.00 0.00 0.00 4.30
1788 1921 2.840640 TTCTACTCCCTCCATTCCGA 57.159 50.000 0.00 0.00 0.00 4.55
1789 1922 2.840640 TCTACTCCCTCCATTCCGAA 57.159 50.000 0.00 0.00 0.00 4.30
1790 1923 3.330126 TCTACTCCCTCCATTCCGAAT 57.670 47.619 0.00 0.00 0.00 3.34
1791 1924 3.654273 TCTACTCCCTCCATTCCGAATT 58.346 45.455 0.00 0.00 0.00 2.17
1792 1925 4.811498 TCTACTCCCTCCATTCCGAATTA 58.189 43.478 0.00 0.00 0.00 1.40
1793 1926 3.840124 ACTCCCTCCATTCCGAATTAC 57.160 47.619 0.00 0.00 0.00 1.89
1794 1927 3.385115 ACTCCCTCCATTCCGAATTACT 58.615 45.455 0.00 0.00 0.00 2.24
1795 1928 3.780850 ACTCCCTCCATTCCGAATTACTT 59.219 43.478 0.00 0.00 0.00 2.24
1796 1929 4.130118 CTCCCTCCATTCCGAATTACTTG 58.870 47.826 0.00 0.00 0.00 3.16
1797 1930 3.521937 TCCCTCCATTCCGAATTACTTGT 59.478 43.478 0.00 0.00 0.00 3.16
1798 1931 3.877508 CCCTCCATTCCGAATTACTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
1799 1932 4.513442 CCTCCATTCCGAATTACTTGTCA 58.487 43.478 0.00 0.00 0.00 3.58
1800 1933 4.332819 CCTCCATTCCGAATTACTTGTCAC 59.667 45.833 0.00 0.00 0.00 3.67
1801 1934 4.900684 TCCATTCCGAATTACTTGTCACA 58.099 39.130 0.00 0.00 0.00 3.58
1802 1935 4.935205 TCCATTCCGAATTACTTGTCACAG 59.065 41.667 0.00 0.00 0.00 3.66
1803 1936 4.094887 CCATTCCGAATTACTTGTCACAGG 59.905 45.833 0.00 0.00 0.00 4.00
1804 1937 4.345859 TTCCGAATTACTTGTCACAGGT 57.654 40.909 0.00 0.00 0.00 4.00
1805 1938 5.471556 TTCCGAATTACTTGTCACAGGTA 57.528 39.130 0.00 0.00 0.00 3.08
1806 1939 5.670792 TCCGAATTACTTGTCACAGGTAT 57.329 39.130 0.00 0.00 0.00 2.73
1807 1940 5.416083 TCCGAATTACTTGTCACAGGTATG 58.584 41.667 0.00 0.00 0.00 2.39
1808 1941 4.570772 CCGAATTACTTGTCACAGGTATGG 59.429 45.833 0.00 0.00 0.00 2.74
1809 1942 5.416083 CGAATTACTTGTCACAGGTATGGA 58.584 41.667 0.00 0.00 0.00 3.41
1810 1943 6.049149 CGAATTACTTGTCACAGGTATGGAT 58.951 40.000 0.00 0.00 0.00 3.41
1811 1944 6.018751 CGAATTACTTGTCACAGGTATGGATG 60.019 42.308 0.00 0.00 0.00 3.51
1812 1945 5.755409 TTACTTGTCACAGGTATGGATGT 57.245 39.130 0.00 0.00 0.00 3.06
1813 1946 6.860790 TTACTTGTCACAGGTATGGATGTA 57.139 37.500 0.00 0.00 0.00 2.29
1814 1947 5.957771 ACTTGTCACAGGTATGGATGTAT 57.042 39.130 0.00 0.00 0.00 2.29
1815 1948 5.918608 ACTTGTCACAGGTATGGATGTATC 58.081 41.667 0.00 0.00 0.00 2.24
1816 1949 5.663106 ACTTGTCACAGGTATGGATGTATCT 59.337 40.000 0.00 0.00 0.00 1.98
1817 1950 6.839134 ACTTGTCACAGGTATGGATGTATCTA 59.161 38.462 0.00 0.00 0.00 1.98
1818 1951 6.901081 TGTCACAGGTATGGATGTATCTAG 57.099 41.667 0.00 0.00 0.00 2.43
1819 1952 6.610830 TGTCACAGGTATGGATGTATCTAGA 58.389 40.000 0.00 0.00 0.00 2.43
1820 1953 7.241628 TGTCACAGGTATGGATGTATCTAGAT 58.758 38.462 10.73 10.73 0.00 1.98
1821 1954 8.390921 TGTCACAGGTATGGATGTATCTAGATA 58.609 37.037 8.44 8.44 0.00 1.98
1822 1955 9.415008 GTCACAGGTATGGATGTATCTAGATAT 57.585 37.037 15.43 1.62 0.00 1.63
1851 1984 9.998106 TTTAGTTCTAGATATACCCATTTCTGC 57.002 33.333 0.00 0.00 0.00 4.26
1852 1985 6.692486 AGTTCTAGATATACCCATTTCTGCG 58.308 40.000 0.00 0.00 0.00 5.18
1853 1986 6.493802 AGTTCTAGATATACCCATTTCTGCGA 59.506 38.462 0.00 0.00 0.00 5.10
1854 1987 6.268825 TCTAGATATACCCATTTCTGCGAC 57.731 41.667 0.00 0.00 0.00 5.19
1855 1988 3.914312 AGATATACCCATTTCTGCGACG 58.086 45.455 0.00 0.00 0.00 5.12
1856 1989 3.572682 AGATATACCCATTTCTGCGACGA 59.427 43.478 0.00 0.00 0.00 4.20
1857 1990 2.225068 ATACCCATTTCTGCGACGAG 57.775 50.000 0.00 0.00 0.00 4.18
1858 1991 0.892755 TACCCATTTCTGCGACGAGT 59.107 50.000 0.00 0.00 0.00 4.18
1859 1992 0.892755 ACCCATTTCTGCGACGAGTA 59.107 50.000 0.00 0.00 0.00 2.59
1860 1993 1.274167 ACCCATTTCTGCGACGAGTAA 59.726 47.619 0.00 0.00 0.00 2.24
1861 1994 2.093658 ACCCATTTCTGCGACGAGTAAT 60.094 45.455 0.00 0.00 0.00 1.89
1862 1995 2.936498 CCCATTTCTGCGACGAGTAATT 59.064 45.455 0.00 0.00 0.00 1.40
1863 1996 3.374058 CCCATTTCTGCGACGAGTAATTT 59.626 43.478 0.00 0.00 0.00 1.82
1864 1997 4.334443 CCATTTCTGCGACGAGTAATTTG 58.666 43.478 0.00 0.00 0.00 2.32
1865 1998 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
1866 1999 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
1867 2000 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
1868 2001 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
1869 2002 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1870 2003 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
1871 2004 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
1872 2005 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
1873 2006 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1874 2007 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1875 2008 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
1876 2009 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
1889 2022 6.127225 GGAACGGAGGGAGTAGTATTTTAACT 60.127 42.308 0.00 0.00 0.00 2.24
2001 2976 6.313519 TGATTTTGTAATCAGCTACTCCCT 57.686 37.500 0.00 0.00 43.93 4.20
2002 2977 6.721318 TGATTTTGTAATCAGCTACTCCCTT 58.279 36.000 0.00 0.00 43.93 3.95
2003 2978 7.175104 TGATTTTGTAATCAGCTACTCCCTTT 58.825 34.615 0.00 0.00 43.93 3.11
2004 2979 8.325787 TGATTTTGTAATCAGCTACTCCCTTTA 58.674 33.333 0.00 0.00 43.93 1.85
2005 2980 9.343539 GATTTTGTAATCAGCTACTCCCTTTAT 57.656 33.333 0.00 0.00 39.96 1.40
2006 2981 9.700831 ATTTTGTAATCAGCTACTCCCTTTATT 57.299 29.630 0.00 0.00 0.00 1.40
2007 2982 8.732746 TTTGTAATCAGCTACTCCCTTTATTC 57.267 34.615 0.00 0.00 0.00 1.75
2008 2983 6.827727 TGTAATCAGCTACTCCCTTTATTCC 58.172 40.000 0.00 0.00 0.00 3.01
2009 2984 5.975988 AATCAGCTACTCCCTTTATTCCA 57.024 39.130 0.00 0.00 0.00 3.53
2010 2985 5.975988 ATCAGCTACTCCCTTTATTCCAA 57.024 39.130 0.00 0.00 0.00 3.53
2011 2986 5.772393 TCAGCTACTCCCTTTATTCCAAA 57.228 39.130 0.00 0.00 0.00 3.28
2012 2987 6.134535 TCAGCTACTCCCTTTATTCCAAAA 57.865 37.500 0.00 0.00 0.00 2.44
2013 2988 6.548321 TCAGCTACTCCCTTTATTCCAAAAA 58.452 36.000 0.00 0.00 0.00 1.94
2075 3050 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
2076 3051 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
2077 3052 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
2078 3053 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
2094 3069 7.367159 ACATCCGTATCTAGACGAATCTAAG 57.633 40.000 5.60 0.00 45.82 2.18
2095 3070 7.160049 ACATCCGTATCTAGACGAATCTAAGA 58.840 38.462 5.60 0.00 45.82 2.10
2096 3071 7.825270 ACATCCGTATCTAGACGAATCTAAGAT 59.175 37.037 5.60 0.00 45.82 2.40
2097 3072 9.315525 CATCCGTATCTAGACGAATCTAAGATA 57.684 37.037 5.60 0.00 45.82 1.98
2098 3073 9.887629 ATCCGTATCTAGACGAATCTAAGATAA 57.112 33.333 5.60 0.00 45.82 1.75
2099 3074 9.716531 TCCGTATCTAGACGAATCTAAGATAAA 57.283 33.333 5.60 0.00 45.82 1.40
2125 3100 7.669089 TTTTTAAGATAAATCCCACATCCCC 57.331 36.000 0.00 0.00 0.00 4.81
2126 3101 3.508845 AAGATAAATCCCACATCCCCG 57.491 47.619 0.00 0.00 0.00 5.73
2127 3102 1.073923 AGATAAATCCCACATCCCCGC 59.926 52.381 0.00 0.00 0.00 6.13
2128 3103 0.112412 ATAAATCCCACATCCCCGCC 59.888 55.000 0.00 0.00 0.00 6.13
2129 3104 2.332312 TAAATCCCACATCCCCGCCG 62.332 60.000 0.00 0.00 0.00 6.46
2200 3175 4.918201 CCGAATCGGGAGGCAGCC 62.918 72.222 14.91 1.84 44.15 4.85
2202 3177 4.918201 GAATCGGGAGGCAGCCGG 62.918 72.222 5.55 0.00 0.00 6.13
2224 3199 2.506472 GGATTCGGTCCCTCCAGC 59.494 66.667 0.00 0.00 41.50 4.85
2225 3200 2.107141 GATTCGGTCCCTCCAGCG 59.893 66.667 0.00 0.00 38.65 5.18
2226 3201 3.447025 GATTCGGTCCCTCCAGCGG 62.447 68.421 0.00 0.00 37.86 5.52
2266 3241 2.125106 CGTAGGGTCTTGGGCTGC 60.125 66.667 0.00 0.00 0.00 5.25
2267 3242 2.272471 GTAGGGTCTTGGGCTGCC 59.728 66.667 11.05 11.05 0.00 4.85
2268 3243 3.399181 TAGGGTCTTGGGCTGCCG 61.399 66.667 13.40 0.00 0.00 5.69
2306 3281 3.050275 GTGAGCTTGCCCACGGAC 61.050 66.667 0.00 0.00 0.00 4.79
2307 3282 4.680237 TGAGCTTGCCCACGGACG 62.680 66.667 0.00 0.00 0.00 4.79
2308 3283 4.681978 GAGCTTGCCCACGGACGT 62.682 66.667 0.00 0.00 0.00 4.34
2309 3284 4.250305 AGCTTGCCCACGGACGTT 62.250 61.111 0.00 0.00 0.00 3.99
2310 3285 4.025401 GCTTGCCCACGGACGTTG 62.025 66.667 0.00 0.00 0.00 4.10
2311 3286 4.025401 CTTGCCCACGGACGTTGC 62.025 66.667 8.64 8.64 0.00 4.17
2312 3287 4.858680 TTGCCCACGGACGTTGCA 62.859 61.111 12.90 12.90 33.34 4.08
2340 3315 2.890474 GACGATCGCCGCACCAAT 60.890 61.111 16.60 0.00 43.32 3.16
2341 3316 2.871427 GACGATCGCCGCACCAATC 61.871 63.158 16.60 0.00 43.32 2.67
2342 3317 3.640000 CGATCGCCGCACCAATCC 61.640 66.667 0.26 0.00 0.00 3.01
2343 3318 3.279875 GATCGCCGCACCAATCCC 61.280 66.667 0.00 0.00 0.00 3.85
2344 3319 3.757248 GATCGCCGCACCAATCCCT 62.757 63.158 0.00 0.00 0.00 4.20
2345 3320 3.757248 ATCGCCGCACCAATCCCTC 62.757 63.158 0.00 0.00 0.00 4.30
2351 3326 4.856801 CACCAATCCCTCCGCCCG 62.857 72.222 0.00 0.00 0.00 6.13
2369 3344 3.702478 GGCTGCCGAATTTGTCTTC 57.298 52.632 1.35 0.00 0.00 2.87
2370 3345 0.179189 GGCTGCCGAATTTGTCTTCG 60.179 55.000 1.35 0.00 45.79 3.79
2371 3346 0.794605 GCTGCCGAATTTGTCTTCGC 60.795 55.000 0.90 0.00 45.07 4.70
2372 3347 0.179189 CTGCCGAATTTGTCTTCGCC 60.179 55.000 0.90 0.00 45.07 5.54
2373 3348 1.226018 GCCGAATTTGTCTTCGCCG 60.226 57.895 0.90 0.00 45.07 6.46
2374 3349 1.226018 CCGAATTTGTCTTCGCCGC 60.226 57.895 0.90 0.00 45.07 6.53
2375 3350 1.226018 CGAATTTGTCTTCGCCGCC 60.226 57.895 0.00 0.00 41.21 6.13
2376 3351 1.136774 GAATTTGTCTTCGCCGCCC 59.863 57.895 0.00 0.00 0.00 6.13
2377 3352 2.577763 GAATTTGTCTTCGCCGCCCG 62.578 60.000 0.00 0.00 38.61 6.13
2392 3367 3.775654 CCGCCGAGCTCCTCCTTT 61.776 66.667 8.47 0.00 0.00 3.11
2393 3368 2.266055 CGCCGAGCTCCTCCTTTT 59.734 61.111 8.47 0.00 0.00 2.27
2394 3369 1.376037 CGCCGAGCTCCTCCTTTTT 60.376 57.895 8.47 0.00 0.00 1.94
2420 3395 4.351874 CAGAAAGACTGTAAGGGAACCA 57.648 45.455 0.00 0.00 46.59 3.67
2421 3396 4.065789 CAGAAAGACTGTAAGGGAACCAC 58.934 47.826 0.00 0.00 46.59 4.16
2422 3397 5.042905 CAGAAAGACTGTAAGGGAACCACC 61.043 50.000 0.00 0.00 46.59 4.61
2423 3398 7.437911 CAGAAAGACTGTAAGGGAACCACCA 62.438 48.000 0.00 0.00 46.59 4.17
2424 3399 8.819072 CAGAAAGACTGTAAGGGAACCACCAA 62.819 46.154 0.00 0.00 46.59 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 8.140628 TGATTTTGCAACTGAAGCTATGTTTTA 58.859 29.630 0.00 0.00 0.00 1.52
105 106 5.528690 CACAGCAGCTTAAATCATAGCCTAA 59.471 40.000 0.00 0.00 38.14 2.69
115 116 1.203050 ACCACCCACAGCAGCTTAAAT 60.203 47.619 0.00 0.00 0.00 1.40
120 121 3.958860 GGACCACCCACAGCAGCT 61.959 66.667 0.00 0.00 34.14 4.24
156 157 2.045131 GTCGACCGCCTCCACTACT 61.045 63.158 3.51 0.00 0.00 2.57
190 191 0.676782 ACGCTTGTATTCACCTGGCC 60.677 55.000 0.00 0.00 0.00 5.36
201 202 7.442969 TGATAAAAGAAAAAGGAGACGCTTGTA 59.557 33.333 0.00 0.00 0.00 2.41
214 215 8.576442 GGAGATGTTCAGGTGATAAAAGAAAAA 58.424 33.333 0.00 0.00 0.00 1.94
251 252 3.242712 GGCGTGAAAACTTTGTTCATGTG 59.757 43.478 7.88 0.00 41.87 3.21
281 282 2.540101 GTCCTTACACATACATGCTCGC 59.460 50.000 0.00 0.00 0.00 5.03
282 283 3.123804 GGTCCTTACACATACATGCTCG 58.876 50.000 0.00 0.00 0.00 5.03
374 418 7.705325 GCTCGTCAACTAAACTTATTATCCTCA 59.295 37.037 0.00 0.00 0.00 3.86
383 427 5.534407 TGTCATGCTCGTCAACTAAACTTA 58.466 37.500 0.00 0.00 0.00 2.24
395 439 2.098614 AGTCAGATCTGTCATGCTCGT 58.901 47.619 21.92 0.00 0.00 4.18
411 455 7.735917 TCCTAGAAGAAAAATGAACTGAGTCA 58.264 34.615 0.00 0.00 0.00 3.41
435 479 1.512230 TGGCGAGCATGGCAATTTC 59.488 52.632 1.88 0.00 43.90 2.17
444 488 5.132897 TGAAAAATTTAGTTGGCGAGCAT 57.867 34.783 0.00 0.00 0.00 3.79
463 507 8.862325 ATAATTTATATTGGCGTGAGGATGAA 57.138 30.769 0.00 0.00 0.00 2.57
533 584 7.716799 TTCAACCACAGGAAATGCTAAATAT 57.283 32.000 0.00 0.00 0.00 1.28
534 585 7.363705 CCATTCAACCACAGGAAATGCTAAATA 60.364 37.037 0.00 0.00 0.00 1.40
535 586 6.400568 CATTCAACCACAGGAAATGCTAAAT 58.599 36.000 0.00 0.00 0.00 1.40
536 587 5.279406 CCATTCAACCACAGGAAATGCTAAA 60.279 40.000 0.00 0.00 0.00 1.85
537 588 4.220382 CCATTCAACCACAGGAAATGCTAA 59.780 41.667 0.00 0.00 0.00 3.09
538 589 3.763360 CCATTCAACCACAGGAAATGCTA 59.237 43.478 0.00 0.00 0.00 3.49
539 590 2.564062 CCATTCAACCACAGGAAATGCT 59.436 45.455 0.00 0.00 0.00 3.79
540 591 2.299867 ACCATTCAACCACAGGAAATGC 59.700 45.455 0.00 0.00 0.00 3.56
541 592 4.605640 AACCATTCAACCACAGGAAATG 57.394 40.909 0.00 0.00 0.00 2.32
542 593 5.640147 TCTAACCATTCAACCACAGGAAAT 58.360 37.500 0.00 0.00 0.00 2.17
543 594 5.055265 TCTAACCATTCAACCACAGGAAA 57.945 39.130 0.00 0.00 0.00 3.13
544 595 4.506625 CCTCTAACCATTCAACCACAGGAA 60.507 45.833 0.00 0.00 0.00 3.36
545 596 3.009033 CCTCTAACCATTCAACCACAGGA 59.991 47.826 0.00 0.00 0.00 3.86
546 597 3.347216 CCTCTAACCATTCAACCACAGG 58.653 50.000 0.00 0.00 0.00 4.00
547 598 3.009033 TCCCTCTAACCATTCAACCACAG 59.991 47.826 0.00 0.00 0.00 3.66
548 599 2.983192 TCCCTCTAACCATTCAACCACA 59.017 45.455 0.00 0.00 0.00 4.17
549 600 3.713826 TCCCTCTAACCATTCAACCAC 57.286 47.619 0.00 0.00 0.00 4.16
550 601 4.044065 ACAATCCCTCTAACCATTCAACCA 59.956 41.667 0.00 0.00 0.00 3.67
551 602 4.399303 CACAATCCCTCTAACCATTCAACC 59.601 45.833 0.00 0.00 0.00 3.77
552 603 4.399303 CCACAATCCCTCTAACCATTCAAC 59.601 45.833 0.00 0.00 0.00 3.18
553 604 4.044065 ACCACAATCCCTCTAACCATTCAA 59.956 41.667 0.00 0.00 0.00 2.69
554 605 3.591527 ACCACAATCCCTCTAACCATTCA 59.408 43.478 0.00 0.00 0.00 2.57
555 606 4.236527 ACCACAATCCCTCTAACCATTC 57.763 45.455 0.00 0.00 0.00 2.67
556 607 5.163088 GGATACCACAATCCCTCTAACCATT 60.163 44.000 0.00 0.00 39.74 3.16
557 608 4.351111 GGATACCACAATCCCTCTAACCAT 59.649 45.833 0.00 0.00 39.74 3.55
558 609 3.714798 GGATACCACAATCCCTCTAACCA 59.285 47.826 0.00 0.00 39.74 3.67
559 610 4.353383 GGATACCACAATCCCTCTAACC 57.647 50.000 0.00 0.00 39.74 2.85
575 626 2.185663 TCTTGGTGGGGTAGGGATAC 57.814 55.000 0.00 0.00 0.00 2.24
576 627 3.311778 TGAATCTTGGTGGGGTAGGGATA 60.312 47.826 0.00 0.00 0.00 2.59
577 628 2.136026 GAATCTTGGTGGGGTAGGGAT 58.864 52.381 0.00 0.00 0.00 3.85
578 629 1.203505 TGAATCTTGGTGGGGTAGGGA 60.204 52.381 0.00 0.00 0.00 4.20
579 630 1.295020 TGAATCTTGGTGGGGTAGGG 58.705 55.000 0.00 0.00 0.00 3.53
580 631 2.242196 ACATGAATCTTGGTGGGGTAGG 59.758 50.000 0.00 0.00 0.00 3.18
581 632 3.545703 GACATGAATCTTGGTGGGGTAG 58.454 50.000 0.00 0.00 0.00 3.18
582 633 2.241176 GGACATGAATCTTGGTGGGGTA 59.759 50.000 0.00 0.00 0.00 3.69
583 634 1.005924 GGACATGAATCTTGGTGGGGT 59.994 52.381 0.00 0.00 0.00 4.95
584 635 1.686115 GGGACATGAATCTTGGTGGGG 60.686 57.143 0.00 0.00 0.00 4.96
585 636 1.767759 GGGACATGAATCTTGGTGGG 58.232 55.000 0.00 0.00 0.00 4.61
586 637 1.382522 CGGGACATGAATCTTGGTGG 58.617 55.000 0.00 0.00 0.00 4.61
587 638 1.340017 ACCGGGACATGAATCTTGGTG 60.340 52.381 6.32 0.00 0.00 4.17
588 639 0.991920 ACCGGGACATGAATCTTGGT 59.008 50.000 6.32 0.00 0.00 3.67
589 640 1.382522 CACCGGGACATGAATCTTGG 58.617 55.000 6.32 0.00 0.00 3.61
590 641 0.734889 GCACCGGGACATGAATCTTG 59.265 55.000 6.32 0.00 0.00 3.02
591 642 0.620556 AGCACCGGGACATGAATCTT 59.379 50.000 6.32 0.00 0.00 2.40
592 643 0.179000 GAGCACCGGGACATGAATCT 59.821 55.000 6.32 0.00 0.00 2.40
593 644 1.154205 CGAGCACCGGGACATGAATC 61.154 60.000 6.32 0.00 33.91 2.52
594 645 1.153369 CGAGCACCGGGACATGAAT 60.153 57.895 6.32 0.00 33.91 2.57
595 646 2.264480 CGAGCACCGGGACATGAA 59.736 61.111 6.32 0.00 33.91 2.57
596 647 4.451150 GCGAGCACCGGGACATGA 62.451 66.667 6.32 0.00 39.04 3.07
597 648 4.758251 TGCGAGCACCGGGACATG 62.758 66.667 6.32 0.00 39.04 3.21
598 649 2.819984 AAATGCGAGCACCGGGACAT 62.820 55.000 6.32 0.00 39.04 3.06
599 650 2.173758 TAAATGCGAGCACCGGGACA 62.174 55.000 6.32 0.00 39.04 4.02
600 651 0.814010 ATAAATGCGAGCACCGGGAC 60.814 55.000 6.32 0.00 39.04 4.46
601 652 0.107410 AATAAATGCGAGCACCGGGA 60.107 50.000 6.32 0.00 39.04 5.14
602 653 0.307760 GAATAAATGCGAGCACCGGG 59.692 55.000 6.32 0.00 39.04 5.73
603 654 0.307760 GGAATAAATGCGAGCACCGG 59.692 55.000 0.00 0.00 39.04 5.28
604 655 1.003545 CAGGAATAAATGCGAGCACCG 60.004 52.381 0.00 0.00 42.21 4.94
605 656 1.268743 GCAGGAATAAATGCGAGCACC 60.269 52.381 0.00 0.00 31.87 5.01
606 657 1.401552 TGCAGGAATAAATGCGAGCAC 59.598 47.619 0.00 0.00 45.54 4.40
607 658 1.748950 TGCAGGAATAAATGCGAGCA 58.251 45.000 0.00 0.00 45.54 4.26
608 659 3.360249 AATGCAGGAATAAATGCGAGC 57.640 42.857 0.00 0.00 45.54 5.03
609 660 7.648908 TGAAATAAATGCAGGAATAAATGCGAG 59.351 33.333 0.00 0.00 45.54 5.03
610 661 7.487484 TGAAATAAATGCAGGAATAAATGCGA 58.513 30.769 0.00 0.00 45.54 5.10
611 662 7.697352 TGAAATAAATGCAGGAATAAATGCG 57.303 32.000 0.00 0.00 45.54 4.73
622 673 5.284079 CCGGAAATCCTGAAATAAATGCAG 58.716 41.667 0.00 0.00 0.00 4.41
623 674 4.441356 GCCGGAAATCCTGAAATAAATGCA 60.441 41.667 5.05 0.00 0.00 3.96
624 675 4.051237 GCCGGAAATCCTGAAATAAATGC 58.949 43.478 5.05 0.00 0.00 3.56
625 676 4.036262 TCGCCGGAAATCCTGAAATAAATG 59.964 41.667 5.05 0.00 0.00 2.32
626 677 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
627 678 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
628 679 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
629 680 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
630 681 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
631 682 1.339631 ACATCGCCGGAAATCCTGAAA 60.340 47.619 5.05 0.00 0.00 2.69
632 683 0.251916 ACATCGCCGGAAATCCTGAA 59.748 50.000 5.05 0.00 0.00 3.02
633 684 0.461870 CACATCGCCGGAAATCCTGA 60.462 55.000 5.05 0.00 0.00 3.86
634 685 2.016961 CACATCGCCGGAAATCCTG 58.983 57.895 5.05 0.00 0.00 3.86
635 686 1.819632 GCACATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 32.94 3.24
636 687 1.447317 ATGCACATCGCCGGAAATCC 61.447 55.000 5.05 0.00 41.33 3.01
637 688 0.381801 AATGCACATCGCCGGAAATC 59.618 50.000 5.05 0.00 41.33 2.17
638 689 0.381801 GAATGCACATCGCCGGAAAT 59.618 50.000 5.05 0.00 41.33 2.17
639 690 0.957888 TGAATGCACATCGCCGGAAA 60.958 50.000 5.05 0.00 41.33 3.13
640 691 1.368345 CTGAATGCACATCGCCGGAA 61.368 55.000 5.05 0.00 41.33 4.30
641 692 1.815003 CTGAATGCACATCGCCGGA 60.815 57.895 5.05 0.00 41.33 5.14
642 693 2.108514 ACTGAATGCACATCGCCGG 61.109 57.895 0.00 0.00 41.33 6.13
643 694 1.061411 CACTGAATGCACATCGCCG 59.939 57.895 0.00 0.00 41.33 6.46
644 695 1.430632 CCACTGAATGCACATCGCC 59.569 57.895 0.00 0.00 41.33 5.54
645 696 1.026182 TCCCACTGAATGCACATCGC 61.026 55.000 0.00 0.00 42.89 4.58
646 697 1.012086 CTCCCACTGAATGCACATCG 58.988 55.000 0.00 0.00 0.00 3.84
647 698 1.065199 TCCTCCCACTGAATGCACATC 60.065 52.381 0.00 0.00 0.00 3.06
648 699 0.994247 TCCTCCCACTGAATGCACAT 59.006 50.000 0.00 0.00 0.00 3.21
649 700 0.325933 CTCCTCCCACTGAATGCACA 59.674 55.000 0.00 0.00 0.00 4.57
650 701 0.615331 TCTCCTCCCACTGAATGCAC 59.385 55.000 0.00 0.00 0.00 4.57
651 702 0.615331 GTCTCCTCCCACTGAATGCA 59.385 55.000 0.00 0.00 0.00 3.96
652 703 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
653 704 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
654 705 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
655 706 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
656 707 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
657 708 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
658 709 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
677 728 1.712977 ATAGGCACCTCGTCGTCGAC 61.713 60.000 15.51 15.51 41.35 4.20
678 729 1.450848 ATAGGCACCTCGTCGTCGA 60.451 57.895 4.42 4.42 44.12 4.20
679 730 1.298413 CATAGGCACCTCGTCGTCG 60.298 63.158 0.00 0.00 38.55 5.12
680 731 1.065928 CCATAGGCACCTCGTCGTC 59.934 63.158 0.00 0.00 0.00 4.20
681 732 1.681327 ACCATAGGCACCTCGTCGT 60.681 57.895 0.00 0.00 0.00 4.34
682 733 1.226974 CACCATAGGCACCTCGTCG 60.227 63.158 0.00 0.00 0.00 5.12
683 734 0.179108 GTCACCATAGGCACCTCGTC 60.179 60.000 0.00 0.00 0.00 4.20
684 735 0.614979 AGTCACCATAGGCACCTCGT 60.615 55.000 0.00 0.00 0.00 4.18
685 736 0.537188 AAGTCACCATAGGCACCTCG 59.463 55.000 0.00 0.00 0.00 4.63
686 737 1.471676 CGAAGTCACCATAGGCACCTC 60.472 57.143 0.00 0.00 0.00 3.85
687 738 0.537188 CGAAGTCACCATAGGCACCT 59.463 55.000 0.00 0.00 0.00 4.00
688 739 0.249398 ACGAAGTCACCATAGGCACC 59.751 55.000 0.00 0.00 29.74 5.01
689 740 2.953466 TACGAAGTCACCATAGGCAC 57.047 50.000 0.00 0.00 43.93 5.01
690 741 3.965379 TTTACGAAGTCACCATAGGCA 57.035 42.857 0.00 0.00 43.93 4.75
691 742 5.353123 TGAAATTTACGAAGTCACCATAGGC 59.647 40.000 0.00 0.00 43.93 3.93
692 743 6.978343 TGAAATTTACGAAGTCACCATAGG 57.022 37.500 0.00 0.00 43.93 2.57
693 744 9.840427 ATTTTGAAATTTACGAAGTCACCATAG 57.160 29.630 0.00 0.00 43.93 2.23
694 745 9.619316 CATTTTGAAATTTACGAAGTCACCATA 57.381 29.630 0.00 0.00 43.93 2.74
695 746 8.356657 TCATTTTGAAATTTACGAAGTCACCAT 58.643 29.630 0.00 0.00 43.93 3.55
696 747 7.708051 TCATTTTGAAATTTACGAAGTCACCA 58.292 30.769 0.00 0.00 43.93 4.17
697 748 8.742554 ATCATTTTGAAATTTACGAAGTCACC 57.257 30.769 0.00 0.00 43.93 4.02
702 753 8.523464 CGGCTTATCATTTTGAAATTTACGAAG 58.477 33.333 0.00 0.00 0.00 3.79
703 754 7.486551 CCGGCTTATCATTTTGAAATTTACGAA 59.513 33.333 0.00 0.00 0.00 3.85
704 755 6.970043 CCGGCTTATCATTTTGAAATTTACGA 59.030 34.615 0.00 0.00 0.00 3.43
705 756 6.291585 GCCGGCTTATCATTTTGAAATTTACG 60.292 38.462 22.15 0.00 0.00 3.18
706 757 6.756542 AGCCGGCTTATCATTTTGAAATTTAC 59.243 34.615 27.08 0.00 0.00 2.01
707 758 6.872920 AGCCGGCTTATCATTTTGAAATTTA 58.127 32.000 27.08 0.00 0.00 1.40
708 759 5.733676 AGCCGGCTTATCATTTTGAAATTT 58.266 33.333 27.08 0.00 0.00 1.82
709 760 5.105392 TGAGCCGGCTTATCATTTTGAAATT 60.105 36.000 33.34 0.25 0.00 1.82
710 761 4.402155 TGAGCCGGCTTATCATTTTGAAAT 59.598 37.500 33.34 0.74 0.00 2.17
711 762 3.761218 TGAGCCGGCTTATCATTTTGAAA 59.239 39.130 33.34 0.00 0.00 2.69
712 763 3.351740 TGAGCCGGCTTATCATTTTGAA 58.648 40.909 33.34 0.00 0.00 2.69
713 764 2.945008 CTGAGCCGGCTTATCATTTTGA 59.055 45.455 33.34 0.00 0.00 2.69
714 765 2.684881 ACTGAGCCGGCTTATCATTTTG 59.315 45.455 33.34 15.06 0.00 2.44
715 766 3.004752 ACTGAGCCGGCTTATCATTTT 57.995 42.857 33.34 4.05 0.00 1.82
716 767 2.717639 ACTGAGCCGGCTTATCATTT 57.282 45.000 33.34 11.26 0.00 2.32
717 768 4.357918 AATACTGAGCCGGCTTATCATT 57.642 40.909 33.34 23.18 0.00 2.57
718 769 4.319177 GAAATACTGAGCCGGCTTATCAT 58.681 43.478 33.34 18.74 0.00 2.45
719 770 3.728845 GAAATACTGAGCCGGCTTATCA 58.271 45.455 33.34 23.15 0.00 2.15
720 771 2.731976 CGAAATACTGAGCCGGCTTATC 59.268 50.000 33.34 19.36 0.00 1.75
721 772 2.548067 CCGAAATACTGAGCCGGCTTAT 60.548 50.000 33.34 21.59 33.47 1.73
722 773 1.202486 CCGAAATACTGAGCCGGCTTA 60.202 52.381 33.34 26.87 33.47 3.09
723 774 0.462047 CCGAAATACTGAGCCGGCTT 60.462 55.000 33.34 18.32 33.47 4.35
724 775 1.144057 CCGAAATACTGAGCCGGCT 59.856 57.895 33.48 33.48 33.47 5.52
725 776 0.876342 CTCCGAAATACTGAGCCGGC 60.876 60.000 21.89 21.89 39.96 6.13
726 777 0.249489 CCTCCGAAATACTGAGCCGG 60.249 60.000 0.00 0.00 41.36 6.13
727 778 0.460311 ACCTCCGAAATACTGAGCCG 59.540 55.000 0.00 0.00 0.00 5.52
728 779 1.941325 CACCTCCGAAATACTGAGCC 58.059 55.000 0.00 0.00 0.00 4.70
729 780 1.134670 AGCACCTCCGAAATACTGAGC 60.135 52.381 0.00 0.00 0.00 4.26
730 781 2.166459 TGAGCACCTCCGAAATACTGAG 59.834 50.000 0.00 0.00 0.00 3.35
731 782 2.176045 TGAGCACCTCCGAAATACTGA 58.824 47.619 0.00 0.00 0.00 3.41
732 783 2.672961 TGAGCACCTCCGAAATACTG 57.327 50.000 0.00 0.00 0.00 2.74
733 784 3.243434 CGTATGAGCACCTCCGAAATACT 60.243 47.826 0.00 0.00 0.00 2.12
734 785 3.050619 CGTATGAGCACCTCCGAAATAC 58.949 50.000 0.00 0.00 0.00 1.89
735 786 2.691526 ACGTATGAGCACCTCCGAAATA 59.308 45.455 0.00 0.00 0.00 1.40
736 787 1.480954 ACGTATGAGCACCTCCGAAAT 59.519 47.619 0.00 0.00 0.00 2.17
737 788 0.892755 ACGTATGAGCACCTCCGAAA 59.107 50.000 0.00 0.00 0.00 3.46
738 789 1.753930 TACGTATGAGCACCTCCGAA 58.246 50.000 0.00 0.00 0.00 4.30
739 790 1.977056 ATACGTATGAGCACCTCCGA 58.023 50.000 7.41 0.00 0.00 4.55
740 791 2.812591 ACTATACGTATGAGCACCTCCG 59.187 50.000 18.37 0.00 0.00 4.63
741 792 3.568853 ACACTATACGTATGAGCACCTCC 59.431 47.826 18.37 0.00 0.00 4.30
742 793 4.036498 ACACACTATACGTATGAGCACCTC 59.964 45.833 18.37 0.00 0.00 3.85
743 794 3.952323 ACACACTATACGTATGAGCACCT 59.048 43.478 18.37 0.00 0.00 4.00
744 795 4.042398 CACACACTATACGTATGAGCACC 58.958 47.826 18.37 0.00 0.00 5.01
745 796 3.486108 GCACACACTATACGTATGAGCAC 59.514 47.826 18.37 0.00 36.75 4.40
746 797 3.702330 GCACACACTATACGTATGAGCA 58.298 45.455 18.37 0.00 36.75 4.26
747 798 2.719556 CGCACACACTATACGTATGAGC 59.280 50.000 18.37 11.23 33.98 4.26
748 799 3.724257 CACGCACACACTATACGTATGAG 59.276 47.826 18.37 12.91 34.79 2.90
749 800 3.127376 ACACGCACACACTATACGTATGA 59.873 43.478 18.37 1.91 34.79 2.15
750 801 3.239712 CACACGCACACACTATACGTATG 59.760 47.826 18.37 10.33 34.79 2.39
751 802 3.119743 ACACACGCACACACTATACGTAT 60.120 43.478 13.54 13.54 34.79 3.06
752 803 2.226200 ACACACGCACACACTATACGTA 59.774 45.455 0.00 0.00 34.79 3.57
753 804 1.001048 ACACACGCACACACTATACGT 60.001 47.619 0.00 0.00 37.47 3.57
754 805 1.385409 CACACACGCACACACTATACG 59.615 52.381 0.00 0.00 0.00 3.06
755 806 2.400399 ACACACACGCACACACTATAC 58.600 47.619 0.00 0.00 0.00 1.47
756 807 2.804697 ACACACACGCACACACTATA 57.195 45.000 0.00 0.00 0.00 1.31
757 808 1.948104 AACACACACGCACACACTAT 58.052 45.000 0.00 0.00 0.00 2.12
758 809 1.728068 AAACACACACGCACACACTA 58.272 45.000 0.00 0.00 0.00 2.74
759 810 1.728068 TAAACACACACGCACACACT 58.272 45.000 0.00 0.00 0.00 3.55
760 811 2.748461 ATAAACACACACGCACACAC 57.252 45.000 0.00 0.00 0.00 3.82
761 812 2.803386 CCTATAAACACACACGCACACA 59.197 45.455 0.00 0.00 0.00 3.72
762 813 2.158841 CCCTATAAACACACACGCACAC 59.841 50.000 0.00 0.00 0.00 3.82
763 814 2.418692 CCCTATAAACACACACGCACA 58.581 47.619 0.00 0.00 0.00 4.57
764 815 1.735571 CCCCTATAAACACACACGCAC 59.264 52.381 0.00 0.00 0.00 5.34
765 816 1.348366 ACCCCTATAAACACACACGCA 59.652 47.619 0.00 0.00 0.00 5.24
766 817 1.735571 CACCCCTATAAACACACACGC 59.264 52.381 0.00 0.00 0.00 5.34
767 818 3.259064 CTCACCCCTATAAACACACACG 58.741 50.000 0.00 0.00 0.00 4.49
768 819 4.000988 CACTCACCCCTATAAACACACAC 58.999 47.826 0.00 0.00 0.00 3.82
769 820 3.649023 ACACTCACCCCTATAAACACACA 59.351 43.478 0.00 0.00 0.00 3.72
770 821 4.281898 ACACTCACCCCTATAAACACAC 57.718 45.455 0.00 0.00 0.00 3.82
771 822 5.628200 GCATACACTCACCCCTATAAACACA 60.628 44.000 0.00 0.00 0.00 3.72
772 823 4.814771 GCATACACTCACCCCTATAAACAC 59.185 45.833 0.00 0.00 0.00 3.32
773 824 4.442332 CGCATACACTCACCCCTATAAACA 60.442 45.833 0.00 0.00 0.00 2.83
774 825 4.056050 CGCATACACTCACCCCTATAAAC 58.944 47.826 0.00 0.00 0.00 2.01
775 826 3.493699 GCGCATACACTCACCCCTATAAA 60.494 47.826 0.30 0.00 0.00 1.40
776 827 2.036733 GCGCATACACTCACCCCTATAA 59.963 50.000 0.30 0.00 0.00 0.98
777 828 1.616865 GCGCATACACTCACCCCTATA 59.383 52.381 0.30 0.00 0.00 1.31
778 829 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
779 830 0.973496 TGCGCATACACTCACCCCTA 60.973 55.000 5.66 0.00 0.00 3.53
780 831 1.626356 ATGCGCATACACTCACCCCT 61.626 55.000 24.02 0.00 0.00 4.79
781 832 1.153168 ATGCGCATACACTCACCCC 60.153 57.895 24.02 0.00 0.00 4.95
782 833 0.744414 ACATGCGCATACACTCACCC 60.744 55.000 24.84 0.00 0.00 4.61
783 834 1.934589 TACATGCGCATACACTCACC 58.065 50.000 24.84 0.00 0.00 4.02
784 835 3.119628 CGTATACATGCGCATACACTCAC 59.880 47.826 24.84 14.52 0.00 3.51
785 836 3.003897 TCGTATACATGCGCATACACTCA 59.996 43.478 24.84 4.92 35.83 3.41
786 837 3.561503 TCGTATACATGCGCATACACTC 58.438 45.455 24.84 12.59 35.83 3.51
787 838 3.565516 CTCGTATACATGCGCATACACT 58.434 45.455 24.84 10.63 35.83 3.55
788 839 2.090658 GCTCGTATACATGCGCATACAC 59.909 50.000 24.84 16.23 35.83 2.90
789 840 2.324860 GCTCGTATACATGCGCATACA 58.675 47.619 24.84 14.18 35.83 2.29
790 841 1.317611 CGCTCGTATACATGCGCATAC 59.682 52.381 24.84 16.60 41.85 2.39
791 842 1.613270 CGCTCGTATACATGCGCATA 58.387 50.000 24.84 9.30 41.85 3.14
792 843 2.434688 CGCTCGTATACATGCGCAT 58.565 52.632 19.28 19.28 41.85 4.73
793 844 3.916439 CGCTCGTATACATGCGCA 58.084 55.556 14.96 14.96 41.85 6.09
796 847 0.111089 GCAAGCGCTCGTATACATGC 60.111 55.000 12.06 11.00 34.30 4.06
797 848 0.159554 CGCAAGCGCTCGTATACATG 59.840 55.000 12.06 3.22 35.30 3.21
798 849 0.248907 ACGCAAGCGCTCGTATACAT 60.249 50.000 20.96 0.00 44.19 2.29
799 850 0.864377 GACGCAAGCGCTCGTATACA 60.864 55.000 22.11 0.00 44.19 2.29
800 851 0.591741 AGACGCAAGCGCTCGTATAC 60.592 55.000 22.11 11.46 44.19 1.47
801 852 0.591488 CAGACGCAAGCGCTCGTATA 60.591 55.000 22.11 0.00 44.19 1.47
802 853 1.874019 CAGACGCAAGCGCTCGTAT 60.874 57.895 22.11 17.26 44.19 3.06
803 854 1.914531 TACAGACGCAAGCGCTCGTA 61.915 55.000 22.11 9.95 44.19 3.43
804 855 2.543687 ATACAGACGCAAGCGCTCGT 62.544 55.000 22.23 22.23 44.19 4.18
805 856 1.413767 AATACAGACGCAAGCGCTCG 61.414 55.000 12.06 14.49 44.19 5.03
806 857 0.025513 CAATACAGACGCAAGCGCTC 59.974 55.000 12.06 11.06 44.19 5.03
807 858 0.670546 ACAATACAGACGCAAGCGCT 60.671 50.000 15.09 2.64 44.19 5.92
808 859 0.519175 CACAATACAGACGCAAGCGC 60.519 55.000 15.09 0.00 44.19 5.92
809 860 0.790207 ACACAATACAGACGCAAGCG 59.210 50.000 13.50 13.50 46.03 4.68
810 861 2.969443 AACACAATACAGACGCAAGC 57.031 45.000 0.00 0.00 45.62 4.01
871 964 7.557719 ACGGTTAGTACCATTAAGTAGCTAAGA 59.442 37.037 0.00 0.00 45.31 2.10
872 965 7.710896 ACGGTTAGTACCATTAAGTAGCTAAG 58.289 38.462 0.00 0.00 45.31 2.18
873 966 7.645058 ACGGTTAGTACCATTAAGTAGCTAA 57.355 36.000 0.00 0.00 45.31 3.09
874 967 7.645058 AACGGTTAGTACCATTAAGTAGCTA 57.355 36.000 0.00 0.00 45.31 3.32
875 968 6.535963 AACGGTTAGTACCATTAAGTAGCT 57.464 37.500 0.00 0.00 45.31 3.32
977 1085 7.285629 TCATTTTTGTAGTTATGTGTGTTGGGA 59.714 33.333 0.00 0.00 0.00 4.37
989 1097 7.163441 GGTGGAGGTAGTCATTTTTGTAGTTA 58.837 38.462 0.00 0.00 0.00 2.24
1003 1111 3.001406 GGCGGTGGTGGAGGTAGT 61.001 66.667 0.00 0.00 0.00 2.73
1117 1225 3.147595 CCTGATCTCCGTCCGGCA 61.148 66.667 0.00 0.00 34.68 5.69
1216 1324 0.828022 TCACCGTTGTTGACTGGTCT 59.172 50.000 2.38 0.00 34.43 3.85
1477 1585 6.512741 CGAGTAATAACAACAGCACAAAACCT 60.513 38.462 0.00 0.00 0.00 3.50
1495 1603 4.022676 ACGGGAAAAATGCAAACGAGTAAT 60.023 37.500 0.00 0.00 0.00 1.89
1503 1611 3.131223 TCAAGTGACGGGAAAAATGCAAA 59.869 39.130 0.00 0.00 0.00 3.68
1515 1623 6.533819 TTTTGTTACATACTCAAGTGACGG 57.466 37.500 0.00 0.00 0.00 4.79
1533 1642 5.460748 GCTGTAACCACGCTTTTTATTTTGT 59.539 36.000 0.00 0.00 0.00 2.83
1534 1643 5.460419 TGCTGTAACCACGCTTTTTATTTTG 59.540 36.000 0.00 0.00 0.00 2.44
1570 1688 3.300857 CTCGCGTAAGTATGGATGACAG 58.699 50.000 5.77 0.00 41.68 3.51
1586 1704 1.853319 GCAACCGATAATCCTCGCG 59.147 57.895 0.00 0.00 37.33 5.87
1624 1742 7.479150 GCTTTCCAGAAATTTCTCCATTAGAG 58.521 38.462 17.91 10.32 44.75 2.43
1745 1878 0.388659 TGTACCCGTTGTTACGCACT 59.611 50.000 0.00 0.00 46.27 4.40
1772 1905 4.553678 AGTAATTCGGAATGGAGGGAGTA 58.446 43.478 3.59 0.00 0.00 2.59
1773 1906 3.385115 AGTAATTCGGAATGGAGGGAGT 58.615 45.455 3.59 0.00 0.00 3.85
1774 1907 4.130118 CAAGTAATTCGGAATGGAGGGAG 58.870 47.826 3.59 0.00 0.00 4.30
1775 1908 3.521937 ACAAGTAATTCGGAATGGAGGGA 59.478 43.478 3.59 0.00 0.00 4.20
1776 1909 3.877508 GACAAGTAATTCGGAATGGAGGG 59.122 47.826 3.59 0.00 0.00 4.30
1777 1910 4.332819 GTGACAAGTAATTCGGAATGGAGG 59.667 45.833 3.59 0.00 0.00 4.30
1778 1911 4.935205 TGTGACAAGTAATTCGGAATGGAG 59.065 41.667 3.59 0.00 0.00 3.86
1779 1912 4.900684 TGTGACAAGTAATTCGGAATGGA 58.099 39.130 3.59 0.00 0.00 3.41
1780 1913 4.094887 CCTGTGACAAGTAATTCGGAATGG 59.905 45.833 3.59 0.00 0.00 3.16
1781 1914 4.695455 ACCTGTGACAAGTAATTCGGAATG 59.305 41.667 3.59 0.00 0.00 2.67
1782 1915 4.906618 ACCTGTGACAAGTAATTCGGAAT 58.093 39.130 0.00 0.00 0.00 3.01
1783 1916 4.345859 ACCTGTGACAAGTAATTCGGAA 57.654 40.909 0.00 0.00 0.00 4.30
1784 1917 5.416083 CATACCTGTGACAAGTAATTCGGA 58.584 41.667 0.00 0.00 0.00 4.55
1785 1918 4.570772 CCATACCTGTGACAAGTAATTCGG 59.429 45.833 0.00 0.00 0.00 4.30
1786 1919 5.416083 TCCATACCTGTGACAAGTAATTCG 58.584 41.667 0.00 0.00 0.00 3.34
1787 1920 6.823689 ACATCCATACCTGTGACAAGTAATTC 59.176 38.462 0.00 0.00 0.00 2.17
1788 1921 6.721318 ACATCCATACCTGTGACAAGTAATT 58.279 36.000 0.00 0.00 0.00 1.40
1789 1922 6.313519 ACATCCATACCTGTGACAAGTAAT 57.686 37.500 0.00 0.00 0.00 1.89
1790 1923 5.755409 ACATCCATACCTGTGACAAGTAA 57.245 39.130 0.00 0.00 0.00 2.24
1791 1924 6.839134 AGATACATCCATACCTGTGACAAGTA 59.161 38.462 0.00 0.00 0.00 2.24
1792 1925 5.663106 AGATACATCCATACCTGTGACAAGT 59.337 40.000 0.00 0.00 0.00 3.16
1793 1926 6.166984 AGATACATCCATACCTGTGACAAG 57.833 41.667 0.00 0.00 0.00 3.16
1794 1927 7.066781 TCTAGATACATCCATACCTGTGACAA 58.933 38.462 0.00 0.00 0.00 3.18
1795 1928 6.610830 TCTAGATACATCCATACCTGTGACA 58.389 40.000 0.00 0.00 0.00 3.58
1796 1929 7.710676 ATCTAGATACATCCATACCTGTGAC 57.289 40.000 2.53 0.00 0.00 3.67
1825 1958 9.998106 GCAGAAATGGGTATATCTAGAACTAAA 57.002 33.333 0.00 0.00 0.00 1.85
1826 1959 8.304596 CGCAGAAATGGGTATATCTAGAACTAA 58.695 37.037 0.00 0.00 0.00 2.24
1827 1960 7.668469 TCGCAGAAATGGGTATATCTAGAACTA 59.332 37.037 0.00 0.00 0.00 2.24
1828 1961 6.493802 TCGCAGAAATGGGTATATCTAGAACT 59.506 38.462 0.00 0.00 0.00 3.01
1829 1962 6.586844 GTCGCAGAAATGGGTATATCTAGAAC 59.413 42.308 0.00 0.00 39.69 3.01
1830 1963 6.569801 CGTCGCAGAAATGGGTATATCTAGAA 60.570 42.308 0.00 0.00 39.69 2.10
1831 1964 5.106277 CGTCGCAGAAATGGGTATATCTAGA 60.106 44.000 0.00 0.00 39.69 2.43
1832 1965 5.096169 CGTCGCAGAAATGGGTATATCTAG 58.904 45.833 0.00 0.00 39.69 2.43
1833 1966 4.763279 TCGTCGCAGAAATGGGTATATCTA 59.237 41.667 0.00 0.00 39.69 1.98
1834 1967 3.572682 TCGTCGCAGAAATGGGTATATCT 59.427 43.478 0.00 0.00 39.69 1.98
1835 1968 3.909430 TCGTCGCAGAAATGGGTATATC 58.091 45.455 0.00 0.00 39.69 1.63
1836 1969 3.321111 ACTCGTCGCAGAAATGGGTATAT 59.679 43.478 0.00 0.00 39.69 0.86
1837 1970 2.691526 ACTCGTCGCAGAAATGGGTATA 59.308 45.455 0.00 0.00 39.69 1.47
1838 1971 1.480954 ACTCGTCGCAGAAATGGGTAT 59.519 47.619 0.00 0.00 39.69 2.73
1839 1972 0.892755 ACTCGTCGCAGAAATGGGTA 59.107 50.000 0.00 0.00 39.69 3.69
1840 1973 0.892755 TACTCGTCGCAGAAATGGGT 59.107 50.000 0.00 0.00 39.69 4.51
1841 1974 2.004583 TTACTCGTCGCAGAAATGGG 57.995 50.000 0.00 0.00 39.69 4.00
1842 1975 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
1843 1976 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
1844 1977 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
1845 1978 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1846 1979 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1847 1980 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1848 1981 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1849 1982 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1850 1983 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
1851 1984 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
1852 1985 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
1853 1986 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
1854 1987 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
1855 1988 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
1856 1989 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1857 1990 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1858 1991 4.098894 ACTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
1859 1992 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
1860 1993 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
1861 1994 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1862 1995 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
1863 1996 3.393426 AATACTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
1864 1997 4.750021 AAAATACTACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
1865 1998 6.871844 AGTTAAAATACTACTCCCTCCGTTC 58.128 40.000 0.00 0.00 0.00 3.95
1866 1999 6.405176 CGAGTTAAAATACTACTCCCTCCGTT 60.405 42.308 0.00 0.00 35.91 4.44
1867 2000 5.067023 CGAGTTAAAATACTACTCCCTCCGT 59.933 44.000 0.00 0.00 35.91 4.69
1868 2001 5.067023 ACGAGTTAAAATACTACTCCCTCCG 59.933 44.000 0.00 0.00 35.91 4.63
1869 2002 6.096001 TCACGAGTTAAAATACTACTCCCTCC 59.904 42.308 0.00 0.00 35.91 4.30
1870 2003 7.093322 TCACGAGTTAAAATACTACTCCCTC 57.907 40.000 0.00 0.00 35.91 4.30
1871 2004 7.657023 ATCACGAGTTAAAATACTACTCCCT 57.343 36.000 0.00 0.00 35.91 4.20
1872 2005 8.713737 AAATCACGAGTTAAAATACTACTCCC 57.286 34.615 0.00 0.00 35.91 4.30
2049 3024 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
2050 3025 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
2051 3026 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
2052 3027 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
2068 3043 9.100554 CTTAGATTCGTCTAGATACGGATGTAT 57.899 37.037 2.64 0.00 41.14 2.29
2069 3044 8.309656 TCTTAGATTCGTCTAGATACGGATGTA 58.690 37.037 2.64 1.02 41.14 2.29
2070 3045 7.160049 TCTTAGATTCGTCTAGATACGGATGT 58.840 38.462 2.64 1.92 41.14 3.06
2071 3046 7.598189 TCTTAGATTCGTCTAGATACGGATG 57.402 40.000 2.64 0.00 41.14 3.51
2072 3047 9.887629 TTATCTTAGATTCGTCTAGATACGGAT 57.112 33.333 0.00 0.00 43.73 4.18
2073 3048 9.716531 TTTATCTTAGATTCGTCTAGATACGGA 57.283 33.333 0.00 0.00 43.05 4.69
2099 3074 8.713971 GGGGATGTGGGATTTATCTTAAAAATT 58.286 33.333 0.00 0.00 0.00 1.82
2100 3075 7.015195 CGGGGATGTGGGATTTATCTTAAAAAT 59.985 37.037 0.00 0.00 0.00 1.82
2101 3076 6.322712 CGGGGATGTGGGATTTATCTTAAAAA 59.677 38.462 0.00 0.00 0.00 1.94
2102 3077 5.830991 CGGGGATGTGGGATTTATCTTAAAA 59.169 40.000 0.00 0.00 0.00 1.52
2103 3078 5.381757 CGGGGATGTGGGATTTATCTTAAA 58.618 41.667 0.00 0.00 0.00 1.52
2104 3079 4.748548 GCGGGGATGTGGGATTTATCTTAA 60.749 45.833 0.00 0.00 0.00 1.85
2105 3080 3.244770 GCGGGGATGTGGGATTTATCTTA 60.245 47.826 0.00 0.00 0.00 2.10
2106 3081 2.489073 GCGGGGATGTGGGATTTATCTT 60.489 50.000 0.00 0.00 0.00 2.40
2107 3082 1.073923 GCGGGGATGTGGGATTTATCT 59.926 52.381 0.00 0.00 0.00 1.98
2108 3083 1.534729 GCGGGGATGTGGGATTTATC 58.465 55.000 0.00 0.00 0.00 1.75
2109 3084 0.112412 GGCGGGGATGTGGGATTTAT 59.888 55.000 0.00 0.00 0.00 1.40
2110 3085 1.534697 GGCGGGGATGTGGGATTTA 59.465 57.895 0.00 0.00 0.00 1.40
2111 3086 2.278738 GGCGGGGATGTGGGATTT 59.721 61.111 0.00 0.00 0.00 2.17
2112 3087 4.189580 CGGCGGGGATGTGGGATT 62.190 66.667 0.00 0.00 0.00 3.01
2208 3183 2.107141 CGCTGGAGGGACCGAATC 59.893 66.667 0.00 0.00 42.61 2.52
2209 3184 3.470888 CCGCTGGAGGGACCGAAT 61.471 66.667 0.00 0.00 42.61 3.34
2239 3214 1.831726 GACCCTACGGAGGCCTACC 60.832 68.421 8.73 10.29 42.21 3.18
2240 3215 0.396835 AAGACCCTACGGAGGCCTAC 60.397 60.000 8.73 4.32 42.21 3.18
2241 3216 0.396695 CAAGACCCTACGGAGGCCTA 60.397 60.000 8.73 0.00 42.21 3.93
2242 3217 1.686110 CAAGACCCTACGGAGGCCT 60.686 63.158 8.73 3.86 42.21 5.19
2243 3218 2.732619 CCAAGACCCTACGGAGGCC 61.733 68.421 8.73 1.56 42.21 5.19
2244 3219 2.732619 CCCAAGACCCTACGGAGGC 61.733 68.421 8.73 0.00 42.21 4.70
2245 3220 2.732619 GCCCAAGACCCTACGGAGG 61.733 68.421 6.75 6.75 43.33 4.30
2246 3221 1.686110 AGCCCAAGACCCTACGGAG 60.686 63.158 0.00 0.00 0.00 4.63
2247 3222 1.987855 CAGCCCAAGACCCTACGGA 60.988 63.158 0.00 0.00 0.00 4.69
2248 3223 2.584608 CAGCCCAAGACCCTACGG 59.415 66.667 0.00 0.00 0.00 4.02
2249 3224 2.125106 GCAGCCCAAGACCCTACG 60.125 66.667 0.00 0.00 0.00 3.51
2250 3225 2.272471 GGCAGCCCAAGACCCTAC 59.728 66.667 0.00 0.00 0.00 3.18
2251 3226 3.399181 CGGCAGCCCAAGACCCTA 61.399 66.667 5.63 0.00 0.00 3.53
2289 3264 3.050275 GTCCGTGGGCAAGCTCAC 61.050 66.667 14.89 14.89 43.57 3.51
2290 3265 4.680237 CGTCCGTGGGCAAGCTCA 62.680 66.667 0.00 0.00 0.00 4.26
2291 3266 4.681978 ACGTCCGTGGGCAAGCTC 62.682 66.667 0.00 0.00 0.00 4.09
2292 3267 4.250305 AACGTCCGTGGGCAAGCT 62.250 61.111 0.00 0.00 0.00 3.74
2293 3268 4.025401 CAACGTCCGTGGGCAAGC 62.025 66.667 0.00 0.00 0.00 4.01
2294 3269 4.025401 GCAACGTCCGTGGGCAAG 62.025 66.667 10.62 0.00 32.02 4.01
2295 3270 4.858680 TGCAACGTCCGTGGGCAA 62.859 61.111 14.45 2.42 36.67 4.52
2323 3298 2.871427 GATTGGTGCGGCGATCGTC 61.871 63.158 17.81 14.29 41.72 4.20
2324 3299 2.890474 GATTGGTGCGGCGATCGT 60.890 61.111 17.81 0.00 41.72 3.73
2325 3300 3.640000 GGATTGGTGCGGCGATCG 61.640 66.667 12.98 11.69 42.76 3.69
2326 3301 3.279875 GGGATTGGTGCGGCGATC 61.280 66.667 12.98 3.67 0.00 3.69
2327 3302 3.757248 GAGGGATTGGTGCGGCGAT 62.757 63.158 12.98 0.00 0.00 4.58
2328 3303 4.467084 GAGGGATTGGTGCGGCGA 62.467 66.667 12.98 0.00 0.00 5.54
2334 3309 4.856801 CGGGCGGAGGGATTGGTG 62.857 72.222 0.00 0.00 0.00 4.17
2351 3326 0.179189 CGAAGACAAATTCGGCAGCC 60.179 55.000 0.00 0.00 46.39 4.85
2352 3327 3.296516 CGAAGACAAATTCGGCAGC 57.703 52.632 1.07 0.00 46.39 5.25
2358 3333 1.136774 GGGCGGCGAAGACAAATTC 59.863 57.895 12.98 0.00 27.25 2.17
2359 3334 2.686816 CGGGCGGCGAAGACAAATT 61.687 57.895 12.98 0.00 27.25 1.82
2360 3335 3.124921 CGGGCGGCGAAGACAAAT 61.125 61.111 12.98 0.00 27.25 2.32
2375 3350 2.804828 AAAAAGGAGGAGCTCGGCGG 62.805 60.000 7.21 0.00 0.00 6.13
2376 3351 1.376037 AAAAAGGAGGAGCTCGGCG 60.376 57.895 7.83 0.00 0.00 6.46
2377 3352 4.724262 AAAAAGGAGGAGCTCGGC 57.276 55.556 7.83 1.44 0.00 5.54
2399 3374 7.437911 TGGTGGTTCCCTTACAGTCTTTCTG 62.438 48.000 0.00 0.00 41.66 3.02
2400 3375 3.072622 GGTGGTTCCCTTACAGTCTTTCT 59.927 47.826 0.00 0.00 0.00 2.52
2401 3376 3.181448 TGGTGGTTCCCTTACAGTCTTTC 60.181 47.826 0.00 0.00 34.77 2.62
2402 3377 2.781174 TGGTGGTTCCCTTACAGTCTTT 59.219 45.455 0.00 0.00 34.77 2.52
2403 3378 2.414612 TGGTGGTTCCCTTACAGTCTT 58.585 47.619 0.00 0.00 34.77 3.01
2404 3379 2.105993 GTTGGTGGTTCCCTTACAGTCT 59.894 50.000 0.00 0.00 34.77 3.24
2405 3380 2.158726 TGTTGGTGGTTCCCTTACAGTC 60.159 50.000 0.00 0.00 34.77 3.51
2406 3381 1.847737 TGTTGGTGGTTCCCTTACAGT 59.152 47.619 0.00 0.00 34.77 3.55
2407 3382 2.158667 ACTGTTGGTGGTTCCCTTACAG 60.159 50.000 0.00 0.00 41.07 2.74
2408 3383 1.847737 ACTGTTGGTGGTTCCCTTACA 59.152 47.619 0.00 0.00 34.77 2.41
2409 3384 2.651382 ACTGTTGGTGGTTCCCTTAC 57.349 50.000 0.00 0.00 34.77 2.34
2410 3385 6.645884 ATTATACTGTTGGTGGTTCCCTTA 57.354 37.500 0.00 0.00 34.77 2.69
2411 3386 5.530176 ATTATACTGTTGGTGGTTCCCTT 57.470 39.130 0.00 0.00 34.77 3.95
2412 3387 5.530176 AATTATACTGTTGGTGGTTCCCT 57.470 39.130 0.00 0.00 34.77 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.