Multiple sequence alignment - TraesCS2A01G273800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G273800 chr2A 100.000 3749 0 0 1 3749 448295926 448292178 0.000000e+00 6924.0
1 TraesCS2A01G273800 chr2A 95.410 305 12 1 328 630 585704264 585703960 5.630000e-133 484.0
2 TraesCS2A01G273800 chr2A 79.412 374 57 18 2829 3189 744545647 744546013 2.890000e-61 246.0
3 TraesCS2A01G273800 chr2D 91.190 3167 176 53 631 3746 338332216 338329102 0.000000e+00 4207.0
4 TraesCS2A01G273800 chr2D 95.708 233 8 2 101 332 338332432 338332201 1.270000e-99 374.0
5 TraesCS2A01G273800 chr2D 80.109 367 56 13 2835 3188 640367714 640367352 1.340000e-64 257.0
6 TraesCS2A01G273800 chr2D 86.719 128 10 7 2868 2995 560859123 560859243 6.530000e-28 135.0
7 TraesCS2A01G273800 chr3B 95.187 1122 49 3 1652 2769 224957049 224955929 0.000000e+00 1768.0
8 TraesCS2A01G273800 chr3B 94.507 801 27 6 835 1625 224961246 224960453 0.000000e+00 1219.0
9 TraesCS2A01G273800 chr3B 95.082 183 9 0 655 837 224961778 224961596 4.740000e-74 289.0
10 TraesCS2A01G273800 chr3B 87.324 213 16 3 3454 3666 224954294 224954093 2.250000e-57 233.0
11 TraesCS2A01G273800 chr3B 94.667 150 7 1 184 332 224961945 224961796 8.100000e-57 231.0
12 TraesCS2A01G273800 chr7A 84.856 1598 216 19 1034 2612 27604636 27606226 0.000000e+00 1587.0
13 TraesCS2A01G273800 chr7A 89.050 968 103 1 1648 2612 26977641 26976674 0.000000e+00 1197.0
14 TraesCS2A01G273800 chr7A 88.454 970 105 5 1647 2611 26823231 26822264 0.000000e+00 1164.0
15 TraesCS2A01G273800 chr7A 88.223 968 111 1 1648 2612 27032265 27031298 0.000000e+00 1153.0
16 TraesCS2A01G273800 chr7A 91.313 518 44 1 1049 1566 27032938 27032422 0.000000e+00 706.0
17 TraesCS2A01G273800 chr7A 84.605 734 80 22 859 1567 26824150 26823425 0.000000e+00 699.0
18 TraesCS2A01G273800 chr7A 95.082 305 13 1 328 630 4784764 4785068 2.620000e-131 479.0
19 TraesCS2A01G273800 chr4A 89.256 968 99 3 1648 2612 710676695 710675730 0.000000e+00 1206.0
20 TraesCS2A01G273800 chr4A 89.623 530 54 1 1037 1566 710695531 710695003 0.000000e+00 673.0
21 TraesCS2A01G273800 chr4A 89.434 530 55 1 1037 1566 710284829 710284301 0.000000e+00 667.0
22 TraesCS2A01G273800 chr7D 89.153 968 102 1 1648 2612 26559472 26558505 0.000000e+00 1203.0
23 TraesCS2A01G273800 chr7D 88.763 970 102 5 1647 2611 25898021 25897054 0.000000e+00 1181.0
24 TraesCS2A01G273800 chr7D 87.835 970 113 5 1647 2612 26565829 26564861 0.000000e+00 1133.0
25 TraesCS2A01G273800 chr7D 88.196 593 59 7 986 1568 25898730 25898139 0.000000e+00 697.0
26 TraesCS2A01G273800 chr7D 89.189 555 57 3 1034 1585 26566509 26565955 0.000000e+00 689.0
27 TraesCS2A01G273800 chr7D 83.333 90 10 5 3092 3177 523489134 523489222 1.120000e-10 78.7
28 TraesCS2A01G273800 chr4B 95.410 305 12 1 328 630 40215228 40215532 5.630000e-133 484.0
29 TraesCS2A01G273800 chr4B 80.679 383 44 15 2826 3188 317160891 317161263 1.720000e-68 270.0
30 TraesCS2A01G273800 chr1B 95.410 305 12 2 328 630 588322414 588322718 5.630000e-133 484.0
31 TraesCS2A01G273800 chr1B 95.082 305 13 1 328 630 675768816 675769120 2.620000e-131 479.0
32 TraesCS2A01G273800 chr7B 93.333 330 17 3 321 645 553088453 553088782 2.020000e-132 483.0
33 TraesCS2A01G273800 chr7B 83.388 307 29 15 2835 3130 467602340 467602635 7.980000e-67 265.0
34 TraesCS2A01G273800 chr7B 83.388 307 29 15 2835 3130 467646692 467646987 7.980000e-67 265.0
35 TraesCS2A01G273800 chr7B 83.388 307 28 16 2835 3130 467624591 467624885 2.870000e-66 263.0
36 TraesCS2A01G273800 chr2B 95.395 304 12 1 330 631 798371939 798371636 2.020000e-132 483.0
37 TraesCS2A01G273800 chr2B 76.543 162 31 5 2976 3130 665183322 665183161 8.630000e-12 82.4
38 TraesCS2A01G273800 chr1A 95.098 306 13 1 328 631 537536440 537536745 7.280000e-132 481.0
39 TraesCS2A01G273800 chr1A 93.146 321 19 2 328 645 499932277 499932597 5.670000e-128 468.0
40 TraesCS2A01G273800 chr3D 80.429 373 58 11 2829 3188 424493352 424493722 1.720000e-68 270.0
41 TraesCS2A01G273800 chr3D 85.532 235 28 6 2835 3066 307224654 307224423 1.350000e-59 241.0
42 TraesCS2A01G273800 chr5B 80.822 365 50 13 2829 3182 338490234 338490589 6.170000e-68 268.0
43 TraesCS2A01G273800 chr5A 80.267 375 53 17 2829 3188 616635434 616635802 2.870000e-66 263.0
44 TraesCS2A01G273800 chr5A 79.947 379 47 16 2829 3188 184259619 184259251 6.220000e-63 252.0
45 TraesCS2A01G273800 chr1D 80.833 360 46 17 2835 3188 341180112 341180454 1.030000e-65 261.0
46 TraesCS2A01G273800 chr5D 77.660 376 60 17 2827 3188 340544486 340544851 1.360000e-49 207.0
47 TraesCS2A01G273800 chrUn 89.231 65 1 2 3066 3130 354569022 354568964 4.020000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G273800 chr2A 448292178 448295926 3748 True 6924.0 6924 100.0000 1 3749 1 chr2A.!!$R1 3748
1 TraesCS2A01G273800 chr2D 338329102 338332432 3330 True 2290.5 4207 93.4490 101 3746 2 chr2D.!!$R2 3645
2 TraesCS2A01G273800 chr3B 224954093 224961945 7852 True 748.0 1768 93.3534 184 3666 5 chr3B.!!$R1 3482
3 TraesCS2A01G273800 chr7A 27604636 27606226 1590 False 1587.0 1587 84.8560 1034 2612 1 chr7A.!!$F2 1578
4 TraesCS2A01G273800 chr7A 26976674 26977641 967 True 1197.0 1197 89.0500 1648 2612 1 chr7A.!!$R1 964
5 TraesCS2A01G273800 chr7A 26822264 26824150 1886 True 931.5 1164 86.5295 859 2611 2 chr7A.!!$R2 1752
6 TraesCS2A01G273800 chr7A 27031298 27032938 1640 True 929.5 1153 89.7680 1049 2612 2 chr7A.!!$R3 1563
7 TraesCS2A01G273800 chr4A 710675730 710676695 965 True 1206.0 1206 89.2560 1648 2612 1 chr4A.!!$R2 964
8 TraesCS2A01G273800 chr4A 710695003 710695531 528 True 673.0 673 89.6230 1037 1566 1 chr4A.!!$R3 529
9 TraesCS2A01G273800 chr4A 710284301 710284829 528 True 667.0 667 89.4340 1037 1566 1 chr4A.!!$R1 529
10 TraesCS2A01G273800 chr7D 26558505 26559472 967 True 1203.0 1203 89.1530 1648 2612 1 chr7D.!!$R1 964
11 TraesCS2A01G273800 chr7D 25897054 25898730 1676 True 939.0 1181 88.4795 986 2611 2 chr7D.!!$R2 1625
12 TraesCS2A01G273800 chr7D 26564861 26566509 1648 True 911.0 1133 88.5120 1034 2612 2 chr7D.!!$R3 1578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 400 0.036765 TCACCCCTATGAACGTGCAC 60.037 55.0 6.82 6.82 0.00 4.57 F
511 513 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.0 0.00 0.00 32.21 3.66 F
648 650 0.109132 CAGCCGCCCTGATTTTTGTC 60.109 55.0 0.00 0.00 44.64 3.18 F
650 652 0.109132 GCCGCCCTGATTTTTGTCAG 60.109 55.0 0.00 0.00 44.12 3.51 F
1869 5748 0.318699 TCAACACCTTCGACGAGCTG 60.319 55.0 0.00 0.00 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1661 5540 0.391395 CTGAGCCTCTTCTGCACCAG 60.391 60.000 0.00 0.0 0.00 4.00 R
1694 5573 0.736325 GTCGATGGTCGTGTCCAAGG 60.736 60.000 0.00 0.0 41.35 3.61 R
2311 6195 1.446792 CGCAGATGCTCTCCAACGT 60.447 57.895 2.95 0.0 39.32 3.99 R
2605 6489 3.257127 GCCAAACCATTTACCAGCTTGTA 59.743 43.478 0.00 0.0 0.00 2.41 R
3552 8548 0.031721 CCGTTGTATAGGGACTCGGC 59.968 60.000 0.00 0.0 41.75 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.825836 CACTGGGATTGGCCGCTC 60.826 66.667 0.00 0.00 37.63 5.03
18 19 4.473520 ACTGGGATTGGCCGCTCG 62.474 66.667 0.00 0.00 37.63 5.03
19 20 4.473520 CTGGGATTGGCCGCTCGT 62.474 66.667 0.00 0.00 37.63 4.18
20 21 3.976701 CTGGGATTGGCCGCTCGTT 62.977 63.158 0.00 0.00 37.63 3.85
21 22 2.750237 GGGATTGGCCGCTCGTTT 60.750 61.111 0.00 0.00 37.63 3.60
22 23 2.340328 GGGATTGGCCGCTCGTTTT 61.340 57.895 0.00 0.00 37.63 2.43
23 24 1.154035 GGATTGGCCGCTCGTTTTG 60.154 57.895 0.00 0.00 0.00 2.44
24 25 1.579429 GATTGGCCGCTCGTTTTGT 59.421 52.632 0.00 0.00 0.00 2.83
25 26 0.454452 GATTGGCCGCTCGTTTTGTC 60.454 55.000 0.00 0.00 0.00 3.18
26 27 1.862602 ATTGGCCGCTCGTTTTGTCC 61.863 55.000 0.00 0.00 0.00 4.02
27 28 4.084888 GGCCGCTCGTTTTGTCCG 62.085 66.667 0.00 0.00 0.00 4.79
28 29 4.084888 GCCGCTCGTTTTGTCCGG 62.085 66.667 0.00 0.00 41.72 5.14
29 30 3.419759 CCGCTCGTTTTGTCCGGG 61.420 66.667 0.00 0.00 35.54 5.73
30 31 2.356553 CGCTCGTTTTGTCCGGGA 60.357 61.111 0.00 0.00 0.00 5.14
31 32 2.664436 CGCTCGTTTTGTCCGGGAC 61.664 63.158 20.36 20.36 0.00 4.46
32 33 1.595929 GCTCGTTTTGTCCGGGACA 60.596 57.895 25.53 25.53 41.09 4.02
40 41 3.103637 TGTCCGGGACAAAACAAGG 57.896 52.632 26.95 0.00 39.78 3.61
41 42 1.104577 TGTCCGGGACAAAACAAGGC 61.105 55.000 26.95 0.00 39.78 4.35
42 43 1.894756 TCCGGGACAAAACAAGGCG 60.895 57.895 0.00 0.00 0.00 5.52
43 44 1.894756 CCGGGACAAAACAAGGCGA 60.895 57.895 0.00 0.00 0.00 5.54
44 45 1.241315 CCGGGACAAAACAAGGCGAT 61.241 55.000 0.00 0.00 0.00 4.58
45 46 1.444836 CGGGACAAAACAAGGCGATA 58.555 50.000 0.00 0.00 0.00 2.92
46 47 2.014128 CGGGACAAAACAAGGCGATAT 58.986 47.619 0.00 0.00 0.00 1.63
47 48 2.223249 CGGGACAAAACAAGGCGATATG 60.223 50.000 0.00 0.00 0.00 1.78
48 49 2.099098 GGGACAAAACAAGGCGATATGG 59.901 50.000 0.00 0.00 0.00 2.74
49 50 2.752903 GGACAAAACAAGGCGATATGGT 59.247 45.455 0.00 0.00 0.00 3.55
50 51 3.192633 GGACAAAACAAGGCGATATGGTT 59.807 43.478 0.00 0.00 0.00 3.67
51 52 4.321675 GGACAAAACAAGGCGATATGGTTT 60.322 41.667 0.00 0.00 36.93 3.27
52 53 5.208463 ACAAAACAAGGCGATATGGTTTT 57.792 34.783 0.00 0.00 40.99 2.43
53 54 5.606505 ACAAAACAAGGCGATATGGTTTTT 58.393 33.333 0.00 0.00 39.02 1.94
72 73 2.684001 TTCTAACCAGGTGCCATACG 57.316 50.000 0.00 0.00 0.00 3.06
73 74 1.563924 TCTAACCAGGTGCCATACGT 58.436 50.000 0.00 0.00 0.00 3.57
74 75 2.737544 TCTAACCAGGTGCCATACGTA 58.262 47.619 0.00 0.00 0.00 3.57
75 76 2.428171 TCTAACCAGGTGCCATACGTAC 59.572 50.000 0.00 0.00 0.00 3.67
76 77 0.108520 AACCAGGTGCCATACGTACG 60.109 55.000 15.01 15.01 0.00 3.67
77 78 1.252904 ACCAGGTGCCATACGTACGT 61.253 55.000 25.98 25.98 0.00 3.57
78 79 0.804544 CCAGGTGCCATACGTACGTG 60.805 60.000 30.25 15.14 41.11 4.49
79 80 0.804544 CAGGTGCCATACGTACGTGG 60.805 60.000 30.25 23.66 38.74 4.94
80 81 1.216178 GGTGCCATACGTACGTGGT 59.784 57.895 30.25 16.04 37.81 4.16
81 82 1.079875 GGTGCCATACGTACGTGGTG 61.080 60.000 30.25 25.17 37.81 4.17
82 83 0.109179 GTGCCATACGTACGTGGTGA 60.109 55.000 30.25 11.31 37.81 4.02
83 84 0.109179 TGCCATACGTACGTGGTGAC 60.109 55.000 30.25 20.11 37.81 3.67
84 85 0.171903 GCCATACGTACGTGGTGACT 59.828 55.000 30.25 4.23 37.81 3.41
85 86 1.401552 GCCATACGTACGTGGTGACTA 59.598 52.381 30.25 9.30 37.81 2.59
86 87 2.159393 GCCATACGTACGTGGTGACTAA 60.159 50.000 30.25 8.49 37.81 2.24
87 88 3.489738 GCCATACGTACGTGGTGACTAAT 60.490 47.826 30.25 10.59 37.81 1.73
88 89 4.285292 CCATACGTACGTGGTGACTAATC 58.715 47.826 30.25 0.00 0.00 1.75
89 90 4.201940 CCATACGTACGTGGTGACTAATCA 60.202 45.833 30.25 6.35 0.00 2.57
90 91 3.921119 ACGTACGTGGTGACTAATCAA 57.079 42.857 22.14 0.00 36.31 2.57
91 92 4.241590 ACGTACGTGGTGACTAATCAAA 57.758 40.909 22.14 0.00 36.31 2.69
92 93 4.813027 ACGTACGTGGTGACTAATCAAAT 58.187 39.130 22.14 0.00 36.31 2.32
93 94 4.624024 ACGTACGTGGTGACTAATCAAATG 59.376 41.667 22.14 0.00 36.31 2.32
94 95 4.860352 CGTACGTGGTGACTAATCAAATGA 59.140 41.667 7.22 0.00 36.31 2.57
95 96 5.518847 CGTACGTGGTGACTAATCAAATGAT 59.481 40.000 7.22 0.00 36.31 2.45
96 97 5.801350 ACGTGGTGACTAATCAAATGATG 57.199 39.130 0.00 0.00 36.31 3.07
97 98 4.094887 ACGTGGTGACTAATCAAATGATGC 59.905 41.667 0.00 0.00 36.31 3.91
98 99 4.496341 CGTGGTGACTAATCAAATGATGCC 60.496 45.833 0.00 0.00 36.31 4.40
99 100 3.627123 TGGTGACTAATCAAATGATGCCG 59.373 43.478 0.00 0.00 36.31 5.69
200 201 5.118990 AGGATTATATTGATTGGGCGATCG 58.881 41.667 11.69 11.69 0.00 3.69
228 230 8.429237 AGAGATCCCAAATACTTCGATATCTT 57.571 34.615 0.34 0.00 29.56 2.40
303 305 1.268743 CGTACGGACGGGGTTATCTTC 60.269 57.143 13.75 0.00 45.63 2.87
355 357 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
356 358 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
357 359 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
358 360 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
359 361 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
360 362 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
361 363 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
362 364 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
363 365 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
364 366 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
365 367 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
366 368 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
367 369 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
368 370 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
369 371 3.119137 AGACACAAGCGCTCATATACACA 60.119 43.478 12.06 0.00 0.00 3.72
370 372 2.930040 ACACAAGCGCTCATATACACAC 59.070 45.455 12.06 0.00 0.00 3.82
371 373 2.034591 CACAAGCGCTCATATACACACG 60.035 50.000 12.06 0.00 0.00 4.49
372 374 1.071239 CAAGCGCTCATATACACACGC 60.071 52.381 12.06 0.00 46.20 5.34
373 375 2.588731 GCGCTCATATACACACGCA 58.411 52.632 0.00 0.00 45.25 5.24
374 376 1.139989 GCGCTCATATACACACGCAT 58.860 50.000 0.00 0.00 45.25 4.73
375 377 2.324860 GCGCTCATATACACACGCATA 58.675 47.619 0.00 0.00 45.25 3.14
376 378 2.090658 GCGCTCATATACACACGCATAC 59.909 50.000 0.00 0.00 45.25 2.39
377 379 3.305110 CGCTCATATACACACGCATACA 58.695 45.455 0.00 0.00 0.00 2.29
378 380 3.119628 CGCTCATATACACACGCATACAC 59.880 47.826 0.00 0.00 0.00 2.90
379 381 4.299155 GCTCATATACACACGCATACACT 58.701 43.478 0.00 0.00 0.00 3.55
380 382 4.383052 GCTCATATACACACGCATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
381 383 5.508200 TCATATACACACGCATACACTCA 57.492 39.130 0.00 0.00 0.00 3.41
382 384 5.278604 TCATATACACACGCATACACTCAC 58.721 41.667 0.00 0.00 0.00 3.51
383 385 2.357327 TACACACGCATACACTCACC 57.643 50.000 0.00 0.00 0.00 4.02
384 386 0.320421 ACACACGCATACACTCACCC 60.320 55.000 0.00 0.00 0.00 4.61
385 387 1.019278 CACACGCATACACTCACCCC 61.019 60.000 0.00 0.00 0.00 4.95
386 388 1.192146 ACACGCATACACTCACCCCT 61.192 55.000 0.00 0.00 0.00 4.79
387 389 0.821517 CACGCATACACTCACCCCTA 59.178 55.000 0.00 0.00 0.00 3.53
388 390 1.412710 CACGCATACACTCACCCCTAT 59.587 52.381 0.00 0.00 0.00 2.57
389 391 1.412710 ACGCATACACTCACCCCTATG 59.587 52.381 0.00 0.00 0.00 2.23
390 392 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
391 393 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
392 394 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
393 395 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
394 396 1.640917 ACACTCACCCCTATGAACGT 58.359 50.000 0.00 0.00 0.00 3.99
395 397 1.275291 ACACTCACCCCTATGAACGTG 59.725 52.381 0.00 0.00 33.28 4.49
396 398 0.249398 ACTCACCCCTATGAACGTGC 59.751 55.000 0.00 0.00 0.00 5.34
397 399 0.249120 CTCACCCCTATGAACGTGCA 59.751 55.000 0.00 0.00 0.00 4.57
398 400 0.036765 TCACCCCTATGAACGTGCAC 60.037 55.000 6.82 6.82 0.00 4.57
399 401 0.321210 CACCCCTATGAACGTGCACA 60.321 55.000 18.64 0.00 0.00 4.57
400 402 0.321298 ACCCCTATGAACGTGCACAC 60.321 55.000 18.64 8.14 0.00 3.82
411 413 2.280524 TGCACACGCACACCCTAC 60.281 61.111 0.00 0.00 45.36 3.18
412 414 3.047877 GCACACGCACACCCTACC 61.048 66.667 0.00 0.00 38.36 3.18
413 415 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
414 416 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
415 417 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
416 418 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
417 419 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
418 420 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
419 421 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
420 422 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
421 423 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
422 424 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
423 425 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
424 426 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
425 427 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
426 428 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
427 429 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
428 430 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
429 431 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
430 432 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
431 433 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
432 434 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
433 435 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
434 436 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
435 437 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
436 438 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
437 439 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
438 440 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
439 441 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
440 442 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
441 443 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
442 444 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
443 445 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
444 446 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
445 447 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
446 448 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
447 449 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
448 450 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
449 451 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
450 452 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
451 453 1.696336 AGACTGAGCCGGCATATCATT 59.304 47.619 31.54 17.84 0.00 2.57
452 454 2.105477 AGACTGAGCCGGCATATCATTT 59.895 45.455 31.54 13.22 0.00 2.32
453 455 2.880890 GACTGAGCCGGCATATCATTTT 59.119 45.455 31.54 10.68 0.00 1.82
454 456 2.620115 ACTGAGCCGGCATATCATTTTG 59.380 45.455 31.54 13.72 0.00 2.44
455 457 2.880268 CTGAGCCGGCATATCATTTTGA 59.120 45.455 31.54 0.00 0.00 2.69
456 458 2.880268 TGAGCCGGCATATCATTTTGAG 59.120 45.455 31.54 0.00 0.00 3.02
457 459 3.141398 GAGCCGGCATATCATTTTGAGA 58.859 45.455 31.54 0.00 0.00 3.27
458 460 3.755378 GAGCCGGCATATCATTTTGAGAT 59.245 43.478 31.54 0.06 0.00 2.75
459 461 4.147321 AGCCGGCATATCATTTTGAGATT 58.853 39.130 31.54 0.00 0.00 2.40
460 462 4.586001 AGCCGGCATATCATTTTGAGATTT 59.414 37.500 31.54 0.00 0.00 2.17
461 463 5.769662 AGCCGGCATATCATTTTGAGATTTA 59.230 36.000 31.54 0.00 0.00 1.40
462 464 5.858581 GCCGGCATATCATTTTGAGATTTAC 59.141 40.000 24.80 0.00 0.00 2.01
463 465 6.079763 CCGGCATATCATTTTGAGATTTACG 58.920 40.000 0.00 0.00 0.00 3.18
464 466 6.073276 CCGGCATATCATTTTGAGATTTACGA 60.073 38.462 0.00 0.00 0.00 3.43
465 467 7.351981 CGGCATATCATTTTGAGATTTACGAA 58.648 34.615 0.00 0.00 0.00 3.85
466 468 7.531871 CGGCATATCATTTTGAGATTTACGAAG 59.468 37.037 0.00 0.00 0.00 3.79
468 470 9.374960 GCATATCATTTTGAGATTTACGAAGTC 57.625 33.333 0.00 0.00 43.93 3.01
471 473 7.129109 TCATTTTGAGATTTACGAAGTCACC 57.871 36.000 0.00 0.00 43.93 4.02
472 474 5.585500 TTTTGAGATTTACGAAGTCACCG 57.415 39.130 0.00 0.00 43.93 4.94
473 475 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
474 476 5.375417 TTGAGATTTACGAAGTCACCGTA 57.625 39.130 0.00 0.00 43.93 4.02
475 477 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
488 490 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
489 491 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
510 512 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
511 513 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
512 514 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
513 515 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
514 516 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
515 517 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
516 518 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
517 519 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
518 520 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
519 521 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
520 522 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
521 523 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
522 524 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
533 535 2.279451 CGCATCGCCGAATCCTGA 60.279 61.111 0.00 0.00 0.00 3.86
534 536 1.882625 CGCATCGCCGAATCCTGAA 60.883 57.895 0.00 0.00 0.00 3.02
535 537 1.428370 CGCATCGCCGAATCCTGAAA 61.428 55.000 0.00 0.00 0.00 2.69
536 538 0.947244 GCATCGCCGAATCCTGAAAT 59.053 50.000 0.00 0.00 0.00 2.17
537 539 2.143122 GCATCGCCGAATCCTGAAATA 58.857 47.619 0.00 0.00 0.00 1.40
538 540 2.548057 GCATCGCCGAATCCTGAAATAA 59.452 45.455 0.00 0.00 0.00 1.40
539 541 3.003275 GCATCGCCGAATCCTGAAATAAA 59.997 43.478 0.00 0.00 0.00 1.40
540 542 4.320494 GCATCGCCGAATCCTGAAATAAAT 60.320 41.667 0.00 0.00 0.00 1.40
541 543 5.385617 CATCGCCGAATCCTGAAATAAATC 58.614 41.667 0.00 0.00 0.00 2.17
542 544 3.813166 TCGCCGAATCCTGAAATAAATCC 59.187 43.478 0.00 0.00 0.00 3.01
543 545 3.563808 CGCCGAATCCTGAAATAAATCCA 59.436 43.478 0.00 0.00 0.00 3.41
544 546 4.319766 CGCCGAATCCTGAAATAAATCCAG 60.320 45.833 0.00 0.00 0.00 3.86
545 547 4.022849 GCCGAATCCTGAAATAAATCCAGG 60.023 45.833 0.00 0.00 46.64 4.45
555 557 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
556 558 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
557 559 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
558 560 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
559 561 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
560 562 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
561 563 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
562 564 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
563 565 1.486310 AGGAATAATGCGAGCACCAGA 59.514 47.619 0.00 0.00 0.00 3.86
564 566 2.092968 AGGAATAATGCGAGCACCAGAA 60.093 45.455 0.00 0.00 0.00 3.02
565 567 2.880890 GGAATAATGCGAGCACCAGAAT 59.119 45.455 0.00 0.00 0.00 2.40
566 568 3.316308 GGAATAATGCGAGCACCAGAATT 59.684 43.478 0.00 0.00 0.00 2.17
567 569 4.202050 GGAATAATGCGAGCACCAGAATTT 60.202 41.667 0.00 0.00 0.00 1.82
568 570 2.642139 AATGCGAGCACCAGAATTTG 57.358 45.000 0.00 0.00 0.00 2.32
569 571 1.825090 ATGCGAGCACCAGAATTTGA 58.175 45.000 0.00 0.00 0.00 2.69
570 572 1.603456 TGCGAGCACCAGAATTTGAA 58.397 45.000 0.00 0.00 0.00 2.69
571 573 1.266718 TGCGAGCACCAGAATTTGAAC 59.733 47.619 0.00 0.00 0.00 3.18
572 574 1.401539 GCGAGCACCAGAATTTGAACC 60.402 52.381 0.00 0.00 0.00 3.62
573 575 1.200020 CGAGCACCAGAATTTGAACCC 59.800 52.381 0.00 0.00 0.00 4.11
574 576 2.519013 GAGCACCAGAATTTGAACCCT 58.481 47.619 0.00 0.00 0.00 4.34
575 577 2.229784 GAGCACCAGAATTTGAACCCTG 59.770 50.000 0.00 0.00 0.00 4.45
576 578 2.158475 AGCACCAGAATTTGAACCCTGA 60.158 45.455 0.00 0.00 0.00 3.86
577 579 2.827921 GCACCAGAATTTGAACCCTGAT 59.172 45.455 0.00 0.00 0.00 2.90
578 580 3.367703 GCACCAGAATTTGAACCCTGATG 60.368 47.826 0.00 0.00 0.00 3.07
579 581 3.194116 CACCAGAATTTGAACCCTGATGG 59.806 47.826 0.00 0.00 41.37 3.51
580 582 3.075882 ACCAGAATTTGAACCCTGATGGA 59.924 43.478 0.00 0.00 38.00 3.41
581 583 4.264532 ACCAGAATTTGAACCCTGATGGAT 60.265 41.667 0.00 0.00 38.00 3.41
582 584 4.713321 CCAGAATTTGAACCCTGATGGATT 59.287 41.667 0.00 0.00 38.00 3.01
583 585 5.394883 CCAGAATTTGAACCCTGATGGATTG 60.395 44.000 0.00 0.00 38.00 2.67
584 586 5.419788 CAGAATTTGAACCCTGATGGATTGA 59.580 40.000 0.00 0.00 38.00 2.57
585 587 5.655532 AGAATTTGAACCCTGATGGATTGAG 59.344 40.000 0.00 0.00 38.00 3.02
586 588 4.656100 TTTGAACCCTGATGGATTGAGA 57.344 40.909 0.00 0.00 38.00 3.27
587 589 4.656100 TTGAACCCTGATGGATTGAGAA 57.344 40.909 0.00 0.00 38.00 2.87
588 590 4.868172 TGAACCCTGATGGATTGAGAAT 57.132 40.909 0.00 0.00 38.00 2.40
589 591 5.974156 TGAACCCTGATGGATTGAGAATA 57.026 39.130 0.00 0.00 38.00 1.75
590 592 5.684704 TGAACCCTGATGGATTGAGAATAC 58.315 41.667 0.00 0.00 38.00 1.89
591 593 4.713792 ACCCTGATGGATTGAGAATACC 57.286 45.455 0.00 0.00 38.00 2.73
592 594 4.047166 ACCCTGATGGATTGAGAATACCA 58.953 43.478 0.00 0.00 38.00 3.25
593 595 4.141390 ACCCTGATGGATTGAGAATACCAC 60.141 45.833 0.00 0.00 38.00 4.16
594 596 4.103785 CCCTGATGGATTGAGAATACCACT 59.896 45.833 0.00 0.00 35.19 4.00
595 597 5.061853 CCTGATGGATTGAGAATACCACTG 58.938 45.833 0.00 0.00 35.19 3.66
596 598 5.397221 CCTGATGGATTGAGAATACCACTGT 60.397 44.000 0.00 0.00 35.19 3.55
597 599 6.065976 TGATGGATTGAGAATACCACTGTT 57.934 37.500 0.00 0.00 35.19 3.16
598 600 6.115446 TGATGGATTGAGAATACCACTGTTC 58.885 40.000 0.00 0.00 35.19 3.18
599 601 5.497464 TGGATTGAGAATACCACTGTTCA 57.503 39.130 0.00 0.00 0.00 3.18
600 602 5.245531 TGGATTGAGAATACCACTGTTCAC 58.754 41.667 0.00 0.00 0.00 3.18
601 603 4.636206 GGATTGAGAATACCACTGTTCACC 59.364 45.833 0.00 0.00 0.00 4.02
602 604 4.974645 TTGAGAATACCACTGTTCACCT 57.025 40.909 0.00 0.00 0.00 4.00
603 605 6.351881 GGATTGAGAATACCACTGTTCACCTA 60.352 42.308 0.00 0.00 0.00 3.08
604 606 6.428083 TTGAGAATACCACTGTTCACCTAA 57.572 37.500 0.00 0.00 0.00 2.69
605 607 5.790593 TGAGAATACCACTGTTCACCTAAC 58.209 41.667 0.00 0.00 38.67 2.34
606 608 5.161943 AGAATACCACTGTTCACCTAACC 57.838 43.478 0.00 0.00 37.27 2.85
607 609 4.595781 AGAATACCACTGTTCACCTAACCA 59.404 41.667 0.00 0.00 37.27 3.67
608 610 4.986054 ATACCACTGTTCACCTAACCAA 57.014 40.909 0.00 0.00 37.27 3.67
609 611 2.927028 ACCACTGTTCACCTAACCAAC 58.073 47.619 0.00 0.00 37.27 3.77
610 612 2.508300 ACCACTGTTCACCTAACCAACT 59.492 45.455 0.00 0.00 37.27 3.16
611 613 3.139077 CCACTGTTCACCTAACCAACTC 58.861 50.000 0.00 0.00 37.27 3.01
612 614 3.433031 CCACTGTTCACCTAACCAACTCA 60.433 47.826 0.00 0.00 37.27 3.41
613 615 4.196193 CACTGTTCACCTAACCAACTCAA 58.804 43.478 0.00 0.00 37.27 3.02
614 616 4.035208 CACTGTTCACCTAACCAACTCAAC 59.965 45.833 0.00 0.00 37.27 3.18
615 617 3.547746 TGTTCACCTAACCAACTCAACC 58.452 45.455 0.00 0.00 37.27 3.77
616 618 3.054287 TGTTCACCTAACCAACTCAACCA 60.054 43.478 0.00 0.00 37.27 3.67
617 619 3.202829 TCACCTAACCAACTCAACCAC 57.797 47.619 0.00 0.00 0.00 4.16
618 620 2.506231 TCACCTAACCAACTCAACCACA 59.494 45.455 0.00 0.00 0.00 4.17
619 621 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
620 622 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
621 623 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
630 632 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
631 633 1.238439 AACCACAGGTTGATTCGCAG 58.762 50.000 0.00 0.00 45.07 5.18
632 634 1.237285 ACCACAGGTTGATTCGCAGC 61.237 55.000 0.00 0.00 27.29 5.25
636 638 4.179579 GGTTGATTCGCAGCCGCC 62.180 66.667 0.00 0.00 38.16 6.13
637 639 4.179579 GTTGATTCGCAGCCGCCC 62.180 66.667 0.00 0.00 33.11 6.13
638 640 4.408821 TTGATTCGCAGCCGCCCT 62.409 61.111 0.00 0.00 33.11 5.19
640 642 4.838152 GATTCGCAGCCGCCCTGA 62.838 66.667 5.61 0.00 44.64 3.86
641 643 4.181010 ATTCGCAGCCGCCCTGAT 62.181 61.111 5.61 0.00 44.64 2.90
642 644 3.704231 ATTCGCAGCCGCCCTGATT 62.704 57.895 5.61 0.00 44.64 2.57
643 645 3.918253 TTCGCAGCCGCCCTGATTT 62.918 57.895 5.61 0.00 44.64 2.17
644 646 3.443045 CGCAGCCGCCCTGATTTT 61.443 61.111 5.61 0.00 44.64 1.82
645 647 2.973082 GCAGCCGCCCTGATTTTT 59.027 55.556 5.61 0.00 44.64 1.94
646 648 1.446618 GCAGCCGCCCTGATTTTTG 60.447 57.895 5.61 0.00 44.64 2.44
647 649 1.966762 CAGCCGCCCTGATTTTTGT 59.033 52.632 0.00 0.00 44.64 2.83
648 650 0.109132 CAGCCGCCCTGATTTTTGTC 60.109 55.000 0.00 0.00 44.64 3.18
649 651 0.539438 AGCCGCCCTGATTTTTGTCA 60.539 50.000 0.00 0.00 0.00 3.58
650 652 0.109132 GCCGCCCTGATTTTTGTCAG 60.109 55.000 0.00 0.00 44.12 3.51
651 653 1.247567 CCGCCCTGATTTTTGTCAGT 58.752 50.000 3.54 0.00 43.22 3.41
652 654 2.432444 CCGCCCTGATTTTTGTCAGTA 58.568 47.619 3.54 0.00 43.22 2.74
653 655 2.161609 CCGCCCTGATTTTTGTCAGTAC 59.838 50.000 3.54 0.00 43.22 2.73
787 791 2.427753 GGATCTCGTGGCCCATCC 59.572 66.667 0.00 0.00 0.00 3.51
809 813 5.755861 TCCGCAACAATAATTCATCGACATA 59.244 36.000 0.00 0.00 0.00 2.29
810 814 6.073369 CCGCAACAATAATTCATCGACATAG 58.927 40.000 0.00 0.00 0.00 2.23
990 1373 2.022129 CAACGTGGTGACCGAGAGC 61.022 63.158 0.00 0.00 0.00 4.09
1563 1956 2.835156 GCTCTTCCCTCTCAAAGGTAGT 59.165 50.000 0.00 0.00 44.56 2.73
1570 1968 6.337185 TCCCTCTCAAAGGTAGTATGTCTA 57.663 41.667 0.00 0.00 44.56 2.59
1869 5748 0.318699 TCAACACCTTCGACGAGCTG 60.319 55.000 0.00 0.00 0.00 4.24
1963 5842 1.375396 CGCAACAATGTCCCGGAGA 60.375 57.895 0.73 0.00 0.00 3.71
1965 5844 1.243902 GCAACAATGTCCCGGAGAAA 58.756 50.000 0.73 0.00 0.00 2.52
2605 6489 1.378250 GAGGTGCTGCTGGCTTGAT 60.378 57.895 0.00 0.00 42.39 2.57
2630 6514 1.135402 GCTGGTAAATGGTTTGGCGAG 60.135 52.381 0.00 0.00 0.00 5.03
2666 6550 7.642586 CACAAAGGTAGTTTTGTTGCTTACTAC 59.357 37.037 0.00 0.00 46.18 2.73
2667 6551 7.555195 ACAAAGGTAGTTTTGTTGCTTACTACT 59.445 33.333 0.00 0.00 46.18 2.57
2668 6552 9.048446 CAAAGGTAGTTTTGTTGCTTACTACTA 57.952 33.333 0.00 0.00 41.54 1.82
2740 6630 4.255301 CATGGGCATTTGTAGCATTGTTT 58.745 39.130 0.00 0.00 0.00 2.83
2746 6636 5.519927 GGCATTTGTAGCATTGTTTACATCC 59.480 40.000 4.68 2.42 30.53 3.51
2747 6637 6.332630 GCATTTGTAGCATTGTTTACATCCT 58.667 36.000 4.68 0.00 30.53 3.24
2751 6641 4.949238 TGTAGCATTGTTTACATCCTGCAT 59.051 37.500 12.21 4.17 32.23 3.96
2769 6659 5.106038 CCTGCATAACATTGCTTCTCAGAAA 60.106 40.000 0.00 0.00 43.18 2.52
2776 6667 2.592102 TGCTTCTCAGAAATGGCCTT 57.408 45.000 3.32 0.00 0.00 4.35
2830 7809 7.926555 CCTTTTCTAATACCGCTCTATGAAGAA 59.073 37.037 0.00 0.00 0.00 2.52
2833 7812 9.909644 TTTCTAATACCGCTCTATGAAGAATAC 57.090 33.333 0.00 0.00 0.00 1.89
2835 7814 3.644884 ACCGCTCTATGAAGAATACGG 57.355 47.619 0.00 0.00 43.38 4.02
2843 7822 6.618287 TCTATGAAGAATACGGCATTTTGG 57.382 37.500 0.00 0.00 0.00 3.28
2862 7841 3.570540 TGGAGATCGAGATCCATGAAGT 58.429 45.455 15.50 0.00 40.70 3.01
2874 7853 8.668353 CGAGATCCATGAAGTCTTTAATTTTGA 58.332 33.333 0.00 0.00 0.00 2.69
2995 7978 2.760634 TACCTTGAATTGCGAGCTGA 57.239 45.000 0.00 0.00 0.00 4.26
3007 7990 7.384660 TGAATTGCGAGCTGAACAAAAATAAAT 59.615 29.630 0.00 0.00 0.00 1.40
3008 7991 8.755696 AATTGCGAGCTGAACAAAAATAAATA 57.244 26.923 0.00 0.00 0.00 1.40
3009 7992 8.755696 ATTGCGAGCTGAACAAAAATAAATAA 57.244 26.923 0.00 0.00 0.00 1.40
3010 7993 8.581057 TTGCGAGCTGAACAAAAATAAATAAA 57.419 26.923 0.00 0.00 0.00 1.40
3054 8037 8.060931 TGAACAATACATATGCTAAAAAGCCA 57.939 30.769 1.58 0.00 0.00 4.75
3219 8215 3.648339 ACATGTTTCACAACCTGATGC 57.352 42.857 0.00 0.00 33.83 3.91
3234 8230 2.679837 CTGATGCGCACAACTAAATCCT 59.320 45.455 14.90 0.00 0.00 3.24
3257 8253 8.150945 TCCTAGTCATTATTGCACCTTTAGATC 58.849 37.037 0.00 0.00 0.00 2.75
3278 8274 2.600084 CCATGACATCTACTCGTCGACG 60.600 54.545 31.30 31.30 41.45 5.12
3337 8333 8.654230 TCATTTTCATAGTAGAGCATGTCTTC 57.346 34.615 0.00 0.00 36.64 2.87
3411 8407 1.167851 GTAAGCCAGCACATGCAGAA 58.832 50.000 6.64 0.00 45.16 3.02
3412 8408 1.747355 GTAAGCCAGCACATGCAGAAT 59.253 47.619 6.64 0.00 45.16 2.40
3425 8421 7.862372 AGCACATGCAGAATATTTTTATAACCG 59.138 33.333 6.64 0.00 45.16 4.44
3427 8423 9.897744 CACATGCAGAATATTTTTATAACCGAT 57.102 29.630 0.00 0.00 0.00 4.18
3428 8424 9.897744 ACATGCAGAATATTTTTATAACCGATG 57.102 29.630 0.00 0.00 0.00 3.84
3462 8458 8.635877 AGACAATACATGAAGTCTAAACGATC 57.364 34.615 0.00 0.00 39.40 3.69
3463 8459 8.251026 AGACAATACATGAAGTCTAAACGATCA 58.749 33.333 0.00 0.00 39.40 2.92
3473 8469 7.174426 TGAAGTCTAAACGATCACTCTTCTGTA 59.826 37.037 0.00 0.00 33.57 2.74
3518 8514 2.424523 CCGGGGTCTCACCTAGTCTTAT 60.425 54.545 0.00 0.00 38.64 1.73
3526 8522 4.888239 TCTCACCTAGTCTTATGTGGCTAC 59.112 45.833 0.00 0.00 0.00 3.58
3541 8537 2.158385 TGGCTACCCAACAAAAGTCCAT 60.158 45.455 0.00 0.00 38.46 3.41
3543 8539 2.352715 GCTACCCAACAAAAGTCCATGC 60.353 50.000 0.00 0.00 0.00 4.06
3545 8541 1.047002 CCCAACAAAAGTCCATGCCA 58.953 50.000 0.00 0.00 0.00 4.92
3547 8543 1.411977 CCAACAAAAGTCCATGCCACA 59.588 47.619 0.00 0.00 0.00 4.17
3550 8546 2.596346 ACAAAAGTCCATGCCACATGA 58.404 42.857 9.10 0.00 0.00 3.07
3551 8547 2.297033 ACAAAAGTCCATGCCACATGAC 59.703 45.455 9.10 5.79 0.00 3.06
3552 8548 1.167851 AAAGTCCATGCCACATGACG 58.832 50.000 9.10 0.00 0.00 4.35
3553 8549 1.308069 AAGTCCATGCCACATGACGC 61.308 55.000 9.10 0.02 0.00 5.19
3571 8567 0.031721 GCCGAGTCCCTATACAACGG 59.968 60.000 0.00 0.00 41.27 4.44
3575 8571 2.031333 CGAGTCCCTATACAACGGCTAC 60.031 54.545 0.00 0.00 0.00 3.58
3577 8573 4.392940 GAGTCCCTATACAACGGCTACTA 58.607 47.826 0.00 0.00 0.00 1.82
3592 8588 5.533903 ACGGCTACTATTTTAATCCTCTCGA 59.466 40.000 0.00 0.00 0.00 4.04
3607 8603 2.356069 CTCTCGACGATTCCATCAGTGA 59.644 50.000 0.00 0.00 0.00 3.41
3615 8611 5.248640 ACGATTCCATCAGTGATGAGTTTT 58.751 37.500 30.63 12.74 42.09 2.43
3666 8662 1.132234 TGGTGATATCATGGGGGCCTA 60.132 52.381 9.02 0.00 0.00 3.93
3702 8698 0.603707 CTCGCTTTCCTGAGGTTGCA 60.604 55.000 0.00 0.00 0.00 4.08
3729 8725 1.106285 GAAGGCTAGGGTTTGCATGG 58.894 55.000 0.00 0.00 0.00 3.66
3731 8727 2.774799 GGCTAGGGTTTGCATGGCG 61.775 63.158 0.00 0.00 0.00 5.69
3739 8735 0.455410 GTTTGCATGGCGGCTGATTA 59.545 50.000 11.43 0.00 34.04 1.75
3743 8739 1.024271 GCATGGCGGCTGATTAAGAA 58.976 50.000 11.43 0.00 0.00 2.52
3746 8742 3.438360 CATGGCGGCTGATTAAGAAAAC 58.562 45.455 11.43 0.00 0.00 2.43
3747 8743 1.466950 TGGCGGCTGATTAAGAAAACG 59.533 47.619 11.43 0.00 0.00 3.60
3748 8744 1.467342 GGCGGCTGATTAAGAAAACGT 59.533 47.619 0.00 0.00 0.00 3.99
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.825836 GAGCGGCCAATCCCAGTG 60.826 66.667 2.24 0.00 0.00 3.66
1 2 4.473520 CGAGCGGCCAATCCCAGT 62.474 66.667 2.24 0.00 0.00 4.00
2 3 3.976701 AACGAGCGGCCAATCCCAG 62.977 63.158 2.24 0.00 0.00 4.45
4 5 2.340328 AAAACGAGCGGCCAATCCC 61.340 57.895 2.24 0.00 0.00 3.85
5 6 1.154035 CAAAACGAGCGGCCAATCC 60.154 57.895 2.24 0.00 0.00 3.01
6 7 0.454452 GACAAAACGAGCGGCCAATC 60.454 55.000 2.24 0.00 0.00 2.67
7 8 1.579429 GACAAAACGAGCGGCCAAT 59.421 52.632 2.24 0.00 0.00 3.16
9 10 2.975799 GGACAAAACGAGCGGCCA 60.976 61.111 2.24 0.00 0.00 5.36
10 11 4.084888 CGGACAAAACGAGCGGCC 62.085 66.667 0.00 0.00 0.00 6.13
11 12 4.084888 CCGGACAAAACGAGCGGC 62.085 66.667 0.00 0.00 0.00 6.53
12 13 3.419759 CCCGGACAAAACGAGCGG 61.420 66.667 0.73 0.00 0.00 5.52
13 14 2.356553 TCCCGGACAAAACGAGCG 60.357 61.111 0.73 0.00 0.00 5.03
14 15 1.595929 TGTCCCGGACAAAACGAGC 60.596 57.895 18.34 0.00 39.78 5.03
15 16 4.762825 TGTCCCGGACAAAACGAG 57.237 55.556 18.34 0.00 39.78 4.18
22 23 1.104577 GCCTTGTTTTGTCCCGGACA 61.105 55.000 16.73 16.73 41.09 4.02
23 24 1.658114 GCCTTGTTTTGTCCCGGAC 59.342 57.895 10.96 10.96 0.00 4.79
24 25 1.894756 CGCCTTGTTTTGTCCCGGA 60.895 57.895 0.73 0.00 0.00 5.14
25 26 1.241315 ATCGCCTTGTTTTGTCCCGG 61.241 55.000 0.00 0.00 0.00 5.73
26 27 1.444836 TATCGCCTTGTTTTGTCCCG 58.555 50.000 0.00 0.00 0.00 5.14
27 28 2.099098 CCATATCGCCTTGTTTTGTCCC 59.901 50.000 0.00 0.00 0.00 4.46
28 29 2.752903 ACCATATCGCCTTGTTTTGTCC 59.247 45.455 0.00 0.00 0.00 4.02
29 30 4.434713 AACCATATCGCCTTGTTTTGTC 57.565 40.909 0.00 0.00 0.00 3.18
30 31 4.864704 AAACCATATCGCCTTGTTTTGT 57.135 36.364 0.00 0.00 0.00 2.83
50 51 3.754323 CGTATGGCACCTGGTTAGAAAAA 59.246 43.478 0.00 0.00 0.00 1.94
51 52 3.244630 ACGTATGGCACCTGGTTAGAAAA 60.245 43.478 0.00 0.00 0.00 2.29
52 53 2.303600 ACGTATGGCACCTGGTTAGAAA 59.696 45.455 0.00 0.00 0.00 2.52
53 54 1.903860 ACGTATGGCACCTGGTTAGAA 59.096 47.619 0.00 0.00 0.00 2.10
54 55 1.563924 ACGTATGGCACCTGGTTAGA 58.436 50.000 0.00 0.00 0.00 2.10
55 56 2.797087 CGTACGTATGGCACCTGGTTAG 60.797 54.545 7.22 0.00 0.00 2.34
56 57 1.134753 CGTACGTATGGCACCTGGTTA 59.865 52.381 7.22 0.00 0.00 2.85
57 58 0.108520 CGTACGTATGGCACCTGGTT 60.109 55.000 7.22 0.00 0.00 3.67
58 59 1.252904 ACGTACGTATGGCACCTGGT 61.253 55.000 21.41 0.00 0.00 4.00
59 60 0.804544 CACGTACGTATGGCACCTGG 60.805 60.000 22.34 0.14 0.00 4.45
60 61 0.804544 CCACGTACGTATGGCACCTG 60.805 60.000 22.34 5.14 0.00 4.00
61 62 1.252904 ACCACGTACGTATGGCACCT 61.253 55.000 22.34 0.15 39.84 4.00
62 63 1.079875 CACCACGTACGTATGGCACC 61.080 60.000 22.34 0.00 39.84 5.01
63 64 0.109179 TCACCACGTACGTATGGCAC 60.109 55.000 22.34 0.00 39.84 5.01
64 65 0.109179 GTCACCACGTACGTATGGCA 60.109 55.000 22.34 6.81 39.84 4.92
65 66 0.171903 AGTCACCACGTACGTATGGC 59.828 55.000 22.34 22.31 39.84 4.40
66 67 3.763097 TTAGTCACCACGTACGTATGG 57.237 47.619 22.34 21.01 42.13 2.74
67 68 4.912214 TGATTAGTCACCACGTACGTATG 58.088 43.478 22.34 21.15 0.00 2.39
68 69 5.565592 TTGATTAGTCACCACGTACGTAT 57.434 39.130 22.34 9.70 33.11 3.06
69 70 5.369685 TTTGATTAGTCACCACGTACGTA 57.630 39.130 22.34 1.84 33.11 3.57
70 71 3.921119 TTGATTAGTCACCACGTACGT 57.079 42.857 16.72 16.72 33.11 3.57
71 72 4.860352 TCATTTGATTAGTCACCACGTACG 59.140 41.667 15.01 15.01 33.11 3.67
72 73 6.705782 CATCATTTGATTAGTCACCACGTAC 58.294 40.000 0.00 0.00 33.11 3.67
73 74 5.293324 GCATCATTTGATTAGTCACCACGTA 59.707 40.000 0.00 0.00 33.11 3.57
74 75 4.094887 GCATCATTTGATTAGTCACCACGT 59.905 41.667 0.00 0.00 33.11 4.49
75 76 4.496341 GGCATCATTTGATTAGTCACCACG 60.496 45.833 0.00 0.00 33.11 4.94
76 77 4.496341 CGGCATCATTTGATTAGTCACCAC 60.496 45.833 0.00 0.00 33.11 4.16
77 78 3.627123 CGGCATCATTTGATTAGTCACCA 59.373 43.478 0.00 0.00 33.11 4.17
78 79 3.876914 TCGGCATCATTTGATTAGTCACC 59.123 43.478 0.00 0.00 33.11 4.02
79 80 5.484173 TTCGGCATCATTTGATTAGTCAC 57.516 39.130 0.00 0.00 33.11 3.67
80 81 5.449041 GCTTTCGGCATCATTTGATTAGTCA 60.449 40.000 0.00 0.00 41.35 3.41
81 82 4.972440 GCTTTCGGCATCATTTGATTAGTC 59.028 41.667 0.00 0.00 41.35 2.59
82 83 4.925068 GCTTTCGGCATCATTTGATTAGT 58.075 39.130 0.00 0.00 41.35 2.24
117 118 6.863126 GGTGAAAAACATGGATACTTGAACAG 59.137 38.462 0.00 0.00 44.16 3.16
200 201 9.145865 GATATCGAAGTATTTGGGATCTCTTTC 57.854 37.037 0.00 0.00 0.00 2.62
208 209 9.363401 TCTAGAAAGATATCGAAGTATTTGGGA 57.637 33.333 0.00 0.00 0.00 4.37
228 230 8.665643 TCCACGAATTTTACAAAACTCTAGAA 57.334 30.769 0.00 0.00 0.00 2.10
303 305 1.384222 GGCGGCTAAGGGGAAATGTG 61.384 60.000 0.00 0.00 0.00 3.21
332 334 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
334 336 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
335 337 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
336 338 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
337 339 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
338 340 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
339 341 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
341 343 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
342 344 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
343 345 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
344 346 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
345 347 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
346 348 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
347 349 3.119137 TGTGTATATGAGCGCTTGTGTCT 60.119 43.478 13.26 0.00 0.00 3.41
348 350 3.000322 GTGTGTATATGAGCGCTTGTGTC 60.000 47.826 13.26 0.00 0.00 3.67
349 351 2.930040 GTGTGTATATGAGCGCTTGTGT 59.070 45.455 13.26 4.27 0.00 3.72
350 352 2.034591 CGTGTGTATATGAGCGCTTGTG 60.035 50.000 13.26 0.00 0.00 3.33
351 353 2.193447 CGTGTGTATATGAGCGCTTGT 58.807 47.619 13.26 5.98 0.00 3.16
352 354 1.071239 GCGTGTGTATATGAGCGCTTG 60.071 52.381 13.26 0.00 41.37 4.01
353 355 1.209128 GCGTGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 41.37 4.68
354 356 0.102300 TGCGTGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 44.34 5.92
355 357 1.139989 ATGCGTGTGTATATGAGCGC 58.860 50.000 0.00 0.00 44.29 5.92
356 358 3.119628 GTGTATGCGTGTGTATATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
357 359 4.299155 AGTGTATGCGTGTGTATATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
358 360 5.399596 GTGAGTGTATGCGTGTGTATATGAG 59.600 44.000 0.00 0.00 0.00 2.90
359 361 5.278604 GTGAGTGTATGCGTGTGTATATGA 58.721 41.667 0.00 0.00 0.00 2.15
360 362 4.444388 GGTGAGTGTATGCGTGTGTATATG 59.556 45.833 0.00 0.00 0.00 1.78
361 363 4.500887 GGGTGAGTGTATGCGTGTGTATAT 60.501 45.833 0.00 0.00 0.00 0.86
362 364 3.181484 GGGTGAGTGTATGCGTGTGTATA 60.181 47.826 0.00 0.00 0.00 1.47
363 365 2.418197 GGGTGAGTGTATGCGTGTGTAT 60.418 50.000 0.00 0.00 0.00 2.29
364 366 1.067425 GGGTGAGTGTATGCGTGTGTA 60.067 52.381 0.00 0.00 0.00 2.90
365 367 0.320421 GGGTGAGTGTATGCGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
366 368 1.019278 GGGGTGAGTGTATGCGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
367 369 1.192146 AGGGGTGAGTGTATGCGTGT 61.192 55.000 0.00 0.00 0.00 4.49
368 370 0.821517 TAGGGGTGAGTGTATGCGTG 59.178 55.000 0.00 0.00 0.00 5.34
369 371 1.412710 CATAGGGGTGAGTGTATGCGT 59.587 52.381 0.00 0.00 0.00 5.24
370 372 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
371 373 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
372 374 3.132289 ACGTTCATAGGGGTGAGTGTATG 59.868 47.826 0.00 0.00 0.00 2.39
373 375 3.132289 CACGTTCATAGGGGTGAGTGTAT 59.868 47.826 0.00 0.00 32.23 2.29
374 376 2.494471 CACGTTCATAGGGGTGAGTGTA 59.506 50.000 0.00 0.00 32.23 2.90
375 377 1.275291 CACGTTCATAGGGGTGAGTGT 59.725 52.381 0.00 0.00 32.23 3.55
376 378 2.007049 GCACGTTCATAGGGGTGAGTG 61.007 57.143 0.00 0.00 32.23 3.51
377 379 0.249398 GCACGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 32.23 3.41
378 380 0.249120 TGCACGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 32.23 3.51
379 381 0.036765 GTGCACGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 32.23 4.02
380 382 0.321210 TGTGCACGTTCATAGGGGTG 60.321 55.000 13.13 0.00 0.00 4.61
381 383 0.321298 GTGTGCACGTTCATAGGGGT 60.321 55.000 13.13 0.00 0.00 4.95
382 384 2.466867 GTGTGCACGTTCATAGGGG 58.533 57.895 13.13 0.00 0.00 4.79
395 397 3.047877 GGTAGGGTGTGCGTGTGC 61.048 66.667 0.00 0.00 43.20 4.57
396 398 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
397 399 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
398 400 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
399 401 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
400 402 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
401 403 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
402 404 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
403 405 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
404 406 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
405 407 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
406 408 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
407 409 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
408 410 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
409 411 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
410 412 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
411 413 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
412 414 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
413 415 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
414 416 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
415 417 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
416 418 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
417 419 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
418 420 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
419 421 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
420 422 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
421 423 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
422 424 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
423 425 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
424 426 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
425 427 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
426 428 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
427 429 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
428 430 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
429 431 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
430 432 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
431 433 1.346062 ATGATATGCCGGCTCAGTCT 58.654 50.000 29.70 5.43 0.00 3.24
432 434 2.175878 AATGATATGCCGGCTCAGTC 57.824 50.000 29.70 19.55 0.00 3.51
433 435 2.620115 CAAAATGATATGCCGGCTCAGT 59.380 45.455 29.70 19.53 0.00 3.41
434 436 2.880268 TCAAAATGATATGCCGGCTCAG 59.120 45.455 29.70 11.05 0.00 3.35
435 437 2.880268 CTCAAAATGATATGCCGGCTCA 59.120 45.455 29.70 23.34 0.00 4.26
436 438 3.141398 TCTCAAAATGATATGCCGGCTC 58.859 45.455 29.70 17.89 0.00 4.70
437 439 3.213206 TCTCAAAATGATATGCCGGCT 57.787 42.857 29.70 15.76 0.00 5.52
438 440 4.510038 AATCTCAAAATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
439 441 6.073276 TCGTAAATCTCAAAATGATATGCCGG 60.073 38.462 0.00 0.00 0.00 6.13
440 442 6.887368 TCGTAAATCTCAAAATGATATGCCG 58.113 36.000 0.00 0.00 0.00 5.69
441 443 8.345565 ACTTCGTAAATCTCAAAATGATATGCC 58.654 33.333 0.00 0.00 0.00 4.40
442 444 9.374960 GACTTCGTAAATCTCAAAATGATATGC 57.625 33.333 0.00 0.00 0.00 3.14
445 447 8.879759 GGTGACTTCGTAAATCTCAAAATGATA 58.120 33.333 0.00 0.00 0.00 2.15
446 448 7.413000 CGGTGACTTCGTAAATCTCAAAATGAT 60.413 37.037 0.00 0.00 0.00 2.45
447 449 6.128661 CGGTGACTTCGTAAATCTCAAAATGA 60.129 38.462 0.00 0.00 0.00 2.57
448 450 6.015504 CGGTGACTTCGTAAATCTCAAAATG 58.984 40.000 0.00 0.00 0.00 2.32
449 451 5.699458 ACGGTGACTTCGTAAATCTCAAAAT 59.301 36.000 0.00 0.00 39.22 1.82
450 452 5.051816 ACGGTGACTTCGTAAATCTCAAAA 58.948 37.500 0.00 0.00 39.22 2.44
451 453 4.624015 ACGGTGACTTCGTAAATCTCAAA 58.376 39.130 0.00 0.00 39.22 2.69
452 454 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
453 455 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
454 456 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
455 457 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
456 458 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
457 459 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
458 460 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
459 461 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
460 462 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
461 463 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
462 464 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
463 465 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
466 468 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
468 470 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
471 473 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
491 493 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
492 494 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
493 495 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
494 496 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
495 497 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
496 498 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
497 499 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
498 500 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
499 501 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
500 502 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
501 503 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
502 504 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
503 505 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
504 506 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
505 507 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
516 518 1.428370 TTTCAGGATTCGGCGATGCG 61.428 55.000 11.76 0.00 0.00 4.73
517 519 0.947244 ATTTCAGGATTCGGCGATGC 59.053 50.000 11.76 5.61 0.00 3.91
518 520 4.811555 TTTATTTCAGGATTCGGCGATG 57.188 40.909 11.76 6.09 0.00 3.84
519 521 4.455877 GGATTTATTTCAGGATTCGGCGAT 59.544 41.667 11.76 0.10 0.00 4.58
520 522 3.813166 GGATTTATTTCAGGATTCGGCGA 59.187 43.478 4.99 4.99 0.00 5.54
521 523 3.563808 TGGATTTATTTCAGGATTCGGCG 59.436 43.478 0.00 0.00 0.00 6.46
522 524 5.113502 CTGGATTTATTTCAGGATTCGGC 57.886 43.478 0.00 0.00 0.00 5.54
529 531 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
530 532 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
531 533 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
532 534 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
533 535 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
534 536 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
535 537 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
536 538 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
537 539 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
538 540 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
539 541 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
540 542 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
541 543 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
542 544 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
543 545 1.486310 TCTGGTGCTCGCATTATTCCT 59.514 47.619 0.00 0.00 0.00 3.36
544 546 1.953559 TCTGGTGCTCGCATTATTCC 58.046 50.000 0.00 0.00 0.00 3.01
545 547 4.558538 AATTCTGGTGCTCGCATTATTC 57.441 40.909 0.00 0.00 0.00 1.75
546 548 4.398988 TCAAATTCTGGTGCTCGCATTATT 59.601 37.500 0.00 0.00 0.00 1.40
547 549 3.947196 TCAAATTCTGGTGCTCGCATTAT 59.053 39.130 0.00 0.00 0.00 1.28
548 550 3.342719 TCAAATTCTGGTGCTCGCATTA 58.657 40.909 0.00 0.00 0.00 1.90
549 551 2.161855 TCAAATTCTGGTGCTCGCATT 58.838 42.857 0.00 0.00 0.00 3.56
550 552 1.825090 TCAAATTCTGGTGCTCGCAT 58.175 45.000 0.00 0.00 0.00 4.73
551 553 1.266718 GTTCAAATTCTGGTGCTCGCA 59.733 47.619 0.00 0.00 0.00 5.10
552 554 1.401539 GGTTCAAATTCTGGTGCTCGC 60.402 52.381 0.00 0.00 0.00 5.03
553 555 1.200020 GGGTTCAAATTCTGGTGCTCG 59.800 52.381 0.00 0.00 0.00 5.03
554 556 2.229784 CAGGGTTCAAATTCTGGTGCTC 59.770 50.000 0.00 0.00 0.00 4.26
555 557 2.158475 TCAGGGTTCAAATTCTGGTGCT 60.158 45.455 0.00 0.00 0.00 4.40
556 558 2.238521 TCAGGGTTCAAATTCTGGTGC 58.761 47.619 0.00 0.00 0.00 5.01
557 559 3.194116 CCATCAGGGTTCAAATTCTGGTG 59.806 47.826 0.00 0.00 37.90 4.17
558 560 3.075882 TCCATCAGGGTTCAAATTCTGGT 59.924 43.478 0.00 0.00 38.11 4.00
559 561 3.700538 TCCATCAGGGTTCAAATTCTGG 58.299 45.455 0.00 0.00 38.11 3.86
560 562 5.419788 TCAATCCATCAGGGTTCAAATTCTG 59.580 40.000 0.00 0.00 35.53 3.02
561 563 5.582953 TCAATCCATCAGGGTTCAAATTCT 58.417 37.500 0.00 0.00 35.53 2.40
562 564 5.653769 TCTCAATCCATCAGGGTTCAAATTC 59.346 40.000 0.00 0.00 35.53 2.17
563 565 5.582953 TCTCAATCCATCAGGGTTCAAATT 58.417 37.500 0.00 0.00 35.53 1.82
564 566 5.197224 TCTCAATCCATCAGGGTTCAAAT 57.803 39.130 0.00 0.00 35.53 2.32
565 567 4.656100 TCTCAATCCATCAGGGTTCAAA 57.344 40.909 0.00 0.00 35.53 2.69
566 568 4.656100 TTCTCAATCCATCAGGGTTCAA 57.344 40.909 0.00 0.00 35.53 2.69
567 569 4.868172 ATTCTCAATCCATCAGGGTTCA 57.132 40.909 0.00 0.00 35.53 3.18
568 570 5.066593 GGTATTCTCAATCCATCAGGGTTC 58.933 45.833 0.00 0.00 35.53 3.62
569 571 4.478317 TGGTATTCTCAATCCATCAGGGTT 59.522 41.667 0.00 0.00 39.40 4.11
570 572 4.047166 TGGTATTCTCAATCCATCAGGGT 58.953 43.478 0.00 0.00 38.11 4.34
571 573 4.103785 AGTGGTATTCTCAATCCATCAGGG 59.896 45.833 0.00 0.00 34.83 4.45
572 574 5.061853 CAGTGGTATTCTCAATCCATCAGG 58.938 45.833 0.00 0.00 32.45 3.86
573 575 5.678583 ACAGTGGTATTCTCAATCCATCAG 58.321 41.667 0.00 0.00 32.45 2.90
574 576 5.698741 ACAGTGGTATTCTCAATCCATCA 57.301 39.130 0.00 0.00 32.45 3.07
575 577 6.037610 GTGAACAGTGGTATTCTCAATCCATC 59.962 42.308 0.00 0.00 32.45 3.51
576 578 5.882557 GTGAACAGTGGTATTCTCAATCCAT 59.117 40.000 0.00 0.00 32.45 3.41
577 579 5.245531 GTGAACAGTGGTATTCTCAATCCA 58.754 41.667 0.00 0.00 0.00 3.41
578 580 4.636206 GGTGAACAGTGGTATTCTCAATCC 59.364 45.833 0.00 0.00 0.00 3.01
579 581 5.491982 AGGTGAACAGTGGTATTCTCAATC 58.508 41.667 0.00 0.00 0.00 2.67
580 582 5.505181 AGGTGAACAGTGGTATTCTCAAT 57.495 39.130 0.00 0.00 0.00 2.57
581 583 4.974645 AGGTGAACAGTGGTATTCTCAA 57.025 40.909 0.00 0.00 0.00 3.02
582 584 5.279809 GGTTAGGTGAACAGTGGTATTCTCA 60.280 44.000 0.00 0.00 40.09 3.27
583 585 5.176592 GGTTAGGTGAACAGTGGTATTCTC 58.823 45.833 0.00 0.00 40.09 2.87
584 586 4.595781 TGGTTAGGTGAACAGTGGTATTCT 59.404 41.667 0.00 0.00 40.09 2.40
585 587 4.901868 TGGTTAGGTGAACAGTGGTATTC 58.098 43.478 0.00 0.00 40.09 1.75
586 588 4.986054 TGGTTAGGTGAACAGTGGTATT 57.014 40.909 0.00 0.00 40.09 1.89
587 589 4.349930 AGTTGGTTAGGTGAACAGTGGTAT 59.650 41.667 0.00 0.00 40.09 2.73
588 590 3.712733 AGTTGGTTAGGTGAACAGTGGTA 59.287 43.478 0.00 0.00 40.09 3.25
589 591 2.508300 AGTTGGTTAGGTGAACAGTGGT 59.492 45.455 0.00 0.00 40.09 4.16
590 592 3.139077 GAGTTGGTTAGGTGAACAGTGG 58.861 50.000 0.00 0.00 40.09 4.00
591 593 3.804036 TGAGTTGGTTAGGTGAACAGTG 58.196 45.455 0.00 0.00 40.09 3.66
592 594 4.196971 GTTGAGTTGGTTAGGTGAACAGT 58.803 43.478 0.00 0.00 40.09 3.55
593 595 3.564225 GGTTGAGTTGGTTAGGTGAACAG 59.436 47.826 0.00 0.00 40.09 3.16
594 596 3.054287 TGGTTGAGTTGGTTAGGTGAACA 60.054 43.478 0.00 0.00 40.09 3.18
595 597 3.314357 GTGGTTGAGTTGGTTAGGTGAAC 59.686 47.826 0.00 0.00 37.31 3.18
596 598 3.054287 TGTGGTTGAGTTGGTTAGGTGAA 60.054 43.478 0.00 0.00 0.00 3.18
597 599 2.506231 TGTGGTTGAGTTGGTTAGGTGA 59.494 45.455 0.00 0.00 0.00 4.02
598 600 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
599 601 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
600 602 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
601 603 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
602 604 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
603 605 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
613 615 1.237285 GCTGCGAATCAACCTGTGGT 61.237 55.000 0.00 0.00 37.65 4.16
614 616 1.503542 GCTGCGAATCAACCTGTGG 59.496 57.895 0.00 0.00 0.00 4.17
615 617 1.503542 GGCTGCGAATCAACCTGTG 59.496 57.895 0.00 0.00 0.00 3.66
616 618 2.034879 CGGCTGCGAATCAACCTGT 61.035 57.895 0.00 0.00 0.00 4.00
617 619 2.787249 CGGCTGCGAATCAACCTG 59.213 61.111 0.00 0.00 0.00 4.00
618 620 3.127533 GCGGCTGCGAATCAACCT 61.128 61.111 0.00 0.00 0.00 3.50
619 621 4.179579 GGCGGCTGCGAATCAACC 62.180 66.667 12.29 0.00 44.10 3.77
620 622 4.179579 GGGCGGCTGCGAATCAAC 62.180 66.667 12.29 0.00 44.10 3.18
621 623 4.408821 AGGGCGGCTGCGAATCAA 62.409 61.111 12.29 0.00 44.10 2.57
623 625 4.838152 TCAGGGCGGCTGCGAATC 62.838 66.667 12.29 0.94 44.10 2.52
624 626 3.704231 AATCAGGGCGGCTGCGAAT 62.704 57.895 12.29 0.00 44.10 3.34
625 627 3.918253 AAATCAGGGCGGCTGCGAA 62.918 57.895 12.29 0.00 44.10 4.70
626 628 3.918253 AAAATCAGGGCGGCTGCGA 62.918 57.895 12.29 3.44 44.10 5.10
627 629 2.993471 AAAAATCAGGGCGGCTGCG 61.993 57.895 12.29 0.00 44.10 5.18
628 630 1.446618 CAAAAATCAGGGCGGCTGC 60.447 57.895 9.72 9.72 41.71 5.25
629 631 0.109132 GACAAAAATCAGGGCGGCTG 60.109 55.000 9.56 5.48 0.00 4.85
630 632 0.539438 TGACAAAAATCAGGGCGGCT 60.539 50.000 9.56 0.00 0.00 5.52
631 633 0.109132 CTGACAAAAATCAGGGCGGC 60.109 55.000 0.00 0.00 42.13 6.53
644 646 9.582431 GTTGTTGCTCTATTATAGTACTGACAA 57.418 33.333 5.39 0.00 0.00 3.18
645 647 8.195436 GGTTGTTGCTCTATTATAGTACTGACA 58.805 37.037 5.39 0.00 0.00 3.58
646 648 7.652507 GGGTTGTTGCTCTATTATAGTACTGAC 59.347 40.741 5.39 0.00 0.00 3.51
647 649 7.563924 AGGGTTGTTGCTCTATTATAGTACTGA 59.436 37.037 5.39 0.00 0.00 3.41
648 650 7.727181 AGGGTTGTTGCTCTATTATAGTACTG 58.273 38.462 5.39 0.00 0.00 2.74
649 651 7.255520 CGAGGGTTGTTGCTCTATTATAGTACT 60.256 40.741 0.00 0.00 0.00 2.73
650 652 6.862090 CGAGGGTTGTTGCTCTATTATAGTAC 59.138 42.308 0.00 0.00 0.00 2.73
651 653 6.548622 ACGAGGGTTGTTGCTCTATTATAGTA 59.451 38.462 0.00 0.00 0.00 1.82
652 654 5.363005 ACGAGGGTTGTTGCTCTATTATAGT 59.637 40.000 0.00 0.00 0.00 2.12
653 655 5.692204 CACGAGGGTTGTTGCTCTATTATAG 59.308 44.000 0.00 0.00 0.00 1.31
690 694 2.571653 TGGACTGGTACCAAGAAGATGG 59.428 50.000 17.11 3.93 46.38 3.51
787 791 5.561499 GCTATGTCGATGAATTATTGTTGCG 59.439 40.000 0.00 0.00 0.00 4.85
868 1224 2.125912 GTCTCCGCGTGCTCACAT 60.126 61.111 4.92 0.00 0.00 3.21
990 1373 2.377310 CGTGTTGGTTCCGGTAGCG 61.377 63.158 7.49 7.49 0.00 4.26
1637 2067 9.509855 CAGTAACAAACTAATTACTGTGCAAAA 57.490 29.630 13.52 0.00 46.99 2.44
1661 5540 0.391395 CTGAGCCTCTTCTGCACCAG 60.391 60.000 0.00 0.00 0.00 4.00
1694 5573 0.736325 GTCGATGGTCGTGTCCAAGG 60.736 60.000 0.00 0.00 41.35 3.61
2311 6195 1.446792 CGCAGATGCTCTCCAACGT 60.447 57.895 2.95 0.00 39.32 3.99
2364 6248 3.559024 CAGTTGGTCTGCTGCTCG 58.441 61.111 0.00 0.00 37.36 5.03
2605 6489 3.257127 GCCAAACCATTTACCAGCTTGTA 59.743 43.478 0.00 0.00 0.00 2.41
2666 6550 7.382110 AGATAAATCCTTCGTGATCCATGTAG 58.618 38.462 0.00 0.00 0.00 2.74
2667 6551 7.233553 AGAGATAAATCCTTCGTGATCCATGTA 59.766 37.037 0.00 0.00 0.00 2.29
2668 6552 6.042552 AGAGATAAATCCTTCGTGATCCATGT 59.957 38.462 0.00 0.00 0.00 3.21
2751 6641 4.158394 GGCCATTTCTGAGAAGCAATGTTA 59.842 41.667 0.00 0.00 0.00 2.41
2793 7772 8.127327 GCGGTATTAGAAAAGGAAACTAAATCC 58.873 37.037 0.00 0.00 42.68 3.01
2830 7809 3.069586 TCTCGATCTCCAAAATGCCGTAT 59.930 43.478 0.00 0.00 0.00 3.06
2833 7812 1.939974 TCTCGATCTCCAAAATGCCG 58.060 50.000 0.00 0.00 0.00 5.69
2835 7814 3.470709 TGGATCTCGATCTCCAAAATGC 58.529 45.455 12.38 0.00 38.59 3.56
2843 7822 5.452078 AAGACTTCATGGATCTCGATCTC 57.548 43.478 6.84 0.00 37.92 2.75
2933 7913 8.445275 ACACACTTACACATTTCATCTTTGTA 57.555 30.769 0.00 0.00 0.00 2.41
2935 7915 9.729023 TTTACACACTTACACATTTCATCTTTG 57.271 29.630 0.00 0.00 0.00 2.77
2978 7961 1.536766 TGTTCAGCTCGCAATTCAAGG 59.463 47.619 0.00 0.00 0.00 3.61
2979 7962 2.975410 TGTTCAGCTCGCAATTCAAG 57.025 45.000 0.00 0.00 0.00 3.02
2981 7964 3.706802 TTTTGTTCAGCTCGCAATTCA 57.293 38.095 0.00 0.00 0.00 2.57
2982 7965 6.689178 TTATTTTTGTTCAGCTCGCAATTC 57.311 33.333 0.00 0.00 0.00 2.17
3007 7990 8.522830 GTTCATCCTCAAAGTCCATGATTTTTA 58.477 33.333 0.00 0.00 0.00 1.52
3008 7991 7.015487 TGTTCATCCTCAAAGTCCATGATTTTT 59.985 33.333 0.00 0.00 0.00 1.94
3009 7992 6.494491 TGTTCATCCTCAAAGTCCATGATTTT 59.506 34.615 0.00 0.00 0.00 1.82
3010 7993 6.012113 TGTTCATCCTCAAAGTCCATGATTT 58.988 36.000 0.00 0.00 0.00 2.17
3026 8009 9.185192 GCTTTTTAGCATATGTATTGTTCATCC 57.815 33.333 4.29 0.00 34.41 3.51
3219 8215 7.715265 ATAATGACTAGGATTTAGTTGTGCG 57.285 36.000 0.00 0.00 0.00 5.34
3234 8230 7.801104 TGGATCTAAAGGTGCAATAATGACTA 58.199 34.615 0.00 0.00 0.00 2.59
3257 8253 2.600084 CGTCGACGAGTAGATGTCATGG 60.600 54.545 33.35 0.00 43.02 3.66
3278 8274 7.690228 TGTAAAAATGAGAACACACTGTACAC 58.310 34.615 0.00 0.00 0.00 2.90
3382 8378 0.875059 GCTGGCTTACCACACTTGAC 59.125 55.000 0.00 0.00 42.67 3.18
3402 8398 9.897744 CATCGGTTATAAAAATATTCTGCATGT 57.102 29.630 0.00 0.00 0.00 3.21
3518 8514 2.303175 GACTTTTGTTGGGTAGCCACA 58.697 47.619 14.60 12.29 0.00 4.17
3526 8522 1.047002 TGGCATGGACTTTTGTTGGG 58.953 50.000 0.00 0.00 0.00 4.12
3541 8537 3.932580 GACTCGGCGTCATGTGGCA 62.933 63.158 6.85 0.00 42.37 4.92
3543 8539 2.509336 GGACTCGGCGTCATGTGG 60.509 66.667 6.85 0.00 44.68 4.17
3545 8541 0.755698 ATAGGGACTCGGCGTCATGT 60.756 55.000 6.85 1.85 44.68 3.21
3547 8543 1.245732 GTATAGGGACTCGGCGTCAT 58.754 55.000 6.85 0.00 44.68 3.06
3550 8546 0.743097 GTTGTATAGGGACTCGGCGT 59.257 55.000 6.85 0.00 41.75 5.68
3551 8547 0.317603 CGTTGTATAGGGACTCGGCG 60.318 60.000 0.00 0.00 41.75 6.46
3552 8548 0.031721 CCGTTGTATAGGGACTCGGC 59.968 60.000 0.00 0.00 41.75 5.54
3553 8549 0.031721 GCCGTTGTATAGGGACTCGG 59.968 60.000 0.00 0.00 41.75 4.63
3564 8560 8.015185 AGAGGATTAAAATAGTAGCCGTTGTA 57.985 34.615 0.00 0.00 0.00 2.41
3565 8561 6.885922 AGAGGATTAAAATAGTAGCCGTTGT 58.114 36.000 0.00 0.00 0.00 3.32
3571 8567 6.666417 TCGTCGAGAGGATTAAAATAGTAGC 58.334 40.000 0.00 0.00 0.00 3.58
3575 8571 7.145985 TGGAATCGTCGAGAGGATTAAAATAG 58.854 38.462 17.54 0.00 43.44 1.73
3577 8573 5.914033 TGGAATCGTCGAGAGGATTAAAAT 58.086 37.500 17.54 0.10 43.44 1.82
3607 8603 6.519721 CCATATCGGATCTGAGGAAAACTCAT 60.520 42.308 10.61 0.00 46.68 2.90
3672 8668 1.135228 GGAAAGCGAGACAGAGACCTC 60.135 57.143 0.00 0.00 0.00 3.85
3702 8698 1.934410 ACCCTAGCCTTCGTGTTAGT 58.066 50.000 0.00 0.00 0.00 2.24
3729 8725 2.894307 ACGTTTTCTTAATCAGCCGC 57.106 45.000 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.