Multiple sequence alignment - TraesCS2A01G272000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G272000 chr2A 100.000 6544 0 0 1 6544 445330682 445337225 0.000000e+00 12085.0
1 TraesCS2A01G272000 chr2A 92.974 1950 112 7 3127 5068 428898987 428900919 0.000000e+00 2819.0
2 TraesCS2A01G272000 chr2A 96.907 97 3 0 1515 1611 227632610 227632706 5.250000e-36 163.0
3 TraesCS2A01G272000 chr3D 93.307 2256 129 13 2825 5064 421009990 421007741 0.000000e+00 3310.0
4 TraesCS2A01G272000 chr3D 92.943 2253 141 10 2825 5067 578353703 578355947 0.000000e+00 3264.0
5 TraesCS2A01G272000 chr3D 87.365 277 28 5 6271 6543 565825135 565825408 1.770000e-80 311.0
6 TraesCS2A01G272000 chr3D 98.851 87 1 0 1516 1602 511662779 511662865 8.790000e-34 156.0
7 TraesCS2A01G272000 chr6D 92.576 2263 130 25 2825 5067 325712304 325710060 0.000000e+00 3214.0
8 TraesCS2A01G272000 chr6D 93.817 372 20 2 2825 3194 41947852 41947482 2.060000e-154 556.0
9 TraesCS2A01G272000 chr6D 97.701 87 2 0 1516 1602 379808967 379809053 4.090000e-32 150.0
10 TraesCS2A01G272000 chr6D 95.652 92 4 0 1516 1607 304427806 304427897 1.470000e-31 148.0
11 TraesCS2A01G272000 chr6D 91.429 105 5 4 1517 1619 408688791 408688689 2.460000e-29 141.0
12 TraesCS2A01G272000 chrUn 91.840 2255 144 17 2825 5064 67913816 67916045 0.000000e+00 3109.0
13 TraesCS2A01G272000 chrUn 89.826 344 24 3 2825 3168 344577745 344578077 1.300000e-116 431.0
14 TraesCS2A01G272000 chrUn 95.050 101 2 3 1514 1614 82709977 82710074 8.790000e-34 156.0
15 TraesCS2A01G272000 chrUn 98.837 86 1 0 1517 1602 122302101 122302186 3.160000e-33 154.0
16 TraesCS2A01G272000 chrUn 96.667 90 3 0 1514 1603 263385876 263385965 4.090000e-32 150.0
17 TraesCS2A01G272000 chrUn 96.667 90 3 0 1514 1603 344444682 344444771 4.090000e-32 150.0
18 TraesCS2A01G272000 chrUn 97.674 86 2 0 1517 1602 48472394 48472309 1.470000e-31 148.0
19 TraesCS2A01G272000 chrUn 96.629 89 3 0 1514 1602 84437835 84437923 1.470000e-31 148.0
20 TraesCS2A01G272000 chrUn 97.674 86 2 0 1517 1602 235114495 235114410 1.470000e-31 148.0
21 TraesCS2A01G272000 chrUn 97.674 86 2 0 1517 1602 433967109 433967194 1.470000e-31 148.0
22 TraesCS2A01G272000 chrUn 91.589 107 7 2 1513 1619 37292337 37292441 5.290000e-31 147.0
23 TraesCS2A01G272000 chrUn 95.652 92 3 1 1515 1605 279936213 279936304 5.290000e-31 147.0
24 TraesCS2A01G272000 chrUn 95.652 92 3 1 1515 1605 395541600 395541691 5.290000e-31 147.0
25 TraesCS2A01G272000 chrUn 95.556 90 4 0 1517 1606 35713341 35713252 1.900000e-30 145.0
26 TraesCS2A01G272000 chrUn 93.000 100 6 1 1513 1612 37289161 37289259 1.900000e-30 145.0
27 TraesCS2A01G272000 chrUn 87.931 116 8 5 1517 1630 356159676 356159565 1.480000e-26 132.0
28 TraesCS2A01G272000 chr1D 91.959 2251 131 26 2836 5066 303521791 303519571 0.000000e+00 3109.0
29 TraesCS2A01G272000 chr1D 94.037 1744 90 10 3263 4997 349803582 349805320 0.000000e+00 2632.0
30 TraesCS2A01G272000 chr1D 98.837 86 1 0 1517 1602 464771374 464771289 3.160000e-33 154.0
31 TraesCS2A01G272000 chr2D 94.136 1961 94 9 3125 5068 448692161 448694117 0.000000e+00 2964.0
32 TraesCS2A01G272000 chr2D 93.162 1945 107 13 2830 4761 606529828 606531759 0.000000e+00 2832.0
33 TraesCS2A01G272000 chr2D 94.204 1501 70 6 3578 5064 538732846 538731349 0.000000e+00 2274.0
34 TraesCS2A01G272000 chr2D 94.672 1220 52 6 1600 2808 334314845 334316062 0.000000e+00 1881.0
35 TraesCS2A01G272000 chr2D 96.699 1121 18 6 5066 6180 334316073 334317180 0.000000e+00 1847.0
36 TraesCS2A01G272000 chr2D 96.731 673 19 2 848 1520 334314180 334314849 0.000000e+00 1118.0
37 TraesCS2A01G272000 chr2D 87.812 681 77 5 3 682 357875911 357876586 0.000000e+00 793.0
38 TraesCS2A01G272000 chr6A 92.842 1844 117 8 2825 4656 60234167 60236007 0.000000e+00 2660.0
39 TraesCS2A01G272000 chr6A 89.433 2082 140 44 2825 4896 616185264 616187275 0.000000e+00 2553.0
40 TraesCS2A01G272000 chr6A 88.525 61 6 1 521 580 155090023 155090083 9.100000e-09 73.1
41 TraesCS2A01G272000 chr7D 90.720 2015 157 19 3068 5067 390228559 390230558 0.000000e+00 2658.0
42 TraesCS2A01G272000 chr7D 96.392 194 5 2 6180 6371 556334429 556334622 1.060000e-82 318.0
43 TraesCS2A01G272000 chr7D 94.536 183 10 0 6362 6544 556434133 556434315 3.860000e-72 283.0
44 TraesCS2A01G272000 chr7D 97.872 94 1 1 1512 1604 146660344 146660437 1.890000e-35 161.0
45 TraesCS2A01G272000 chr7D 94.792 96 4 1 1517 1612 405186294 405186388 1.470000e-31 148.0
46 TraesCS2A01G272000 chr7D 91.589 107 5 3 1499 1603 507201921 507201817 1.900000e-30 145.0
47 TraesCS2A01G272000 chr7D 88.136 118 10 4 1496 1610 32004677 32004561 3.180000e-28 137.0
48 TraesCS2A01G272000 chr7D 100.000 28 0 0 2803 2830 511927286 511927313 1.200000e-02 52.8
49 TraesCS2A01G272000 chr7D 100.000 28 0 0 2803 2830 637396529 637396556 1.200000e-02 52.8
50 TraesCS2A01G272000 chr2B 92.131 1220 79 8 1600 2808 402676564 402677777 0.000000e+00 1705.0
51 TraesCS2A01G272000 chr2B 96.206 1028 21 6 5066 6090 402677788 402678800 0.000000e+00 1666.0
52 TraesCS2A01G272000 chr2B 97.944 681 13 1 840 1520 402675889 402676568 0.000000e+00 1179.0
53 TraesCS2A01G272000 chr2B 98.969 97 0 1 1517 1612 37002521 37002425 8.720000e-39 172.0
54 TraesCS2A01G272000 chr2B 98.925 93 1 0 1517 1609 695582957 695583049 4.060000e-37 167.0
55 TraesCS2A01G272000 chr2B 98.913 92 1 0 6089 6180 402678890 402678981 1.460000e-36 165.0
56 TraesCS2A01G272000 chr4D 90.220 910 79 7 4157 5064 508595170 508594269 0.000000e+00 1179.0
57 TraesCS2A01G272000 chr4D 95.699 93 4 0 1517 1609 9296467 9296559 4.090000e-32 150.0
58 TraesCS2A01G272000 chr4D 95.699 93 4 0 1510 1602 426582248 426582340 4.090000e-32 150.0
59 TraesCS2A01G272000 chr4D 96.629 89 3 0 1514 1602 442748546 442748458 1.470000e-31 148.0
60 TraesCS2A01G272000 chr4B 98.913 92 1 0 1511 1602 443547451 443547360 1.460000e-36 165.0
61 TraesCS2A01G272000 chr4B 98.864 88 1 0 1517 1604 44252012 44252099 2.440000e-34 158.0
62 TraesCS2A01G272000 chr4B 97.802 91 2 0 1517 1607 508232167 508232077 2.440000e-34 158.0
63 TraesCS2A01G272000 chr4B 98.864 88 1 0 1517 1604 511105670 511105757 2.440000e-34 158.0
64 TraesCS2A01G272000 chr7B 98.901 91 1 0 1517 1607 689651837 689651747 5.250000e-36 163.0
65 TraesCS2A01G272000 chr6B 98.876 89 1 0 1515 1603 3836069 3836157 6.790000e-35 159.0
66 TraesCS2A01G272000 chr6B 95.050 101 4 1 1510 1610 506874003 506874102 2.440000e-34 158.0
67 TraesCS2A01G272000 chr6B 96.809 94 2 1 1514 1607 280519794 280519702 8.790000e-34 156.0
68 TraesCS2A01G272000 chr6B 91.228 114 6 4 1506 1618 474431752 474431862 1.140000e-32 152.0
69 TraesCS2A01G272000 chr6B 94.898 98 4 1 1516 1613 495435814 495435910 1.140000e-32 152.0
70 TraesCS2A01G272000 chr5B 96.809 94 2 1 1510 1603 432982014 432982106 8.790000e-34 156.0
71 TraesCS2A01G272000 chr5B 91.818 110 6 3 1496 1604 278232199 278232306 4.090000e-32 150.0
72 TraesCS2A01G272000 chr1A 98.851 87 1 0 1516 1602 173963821 173963907 8.790000e-34 156.0
73 TraesCS2A01G272000 chr1A 94.000 100 5 1 1511 1610 344497658 344497756 4.090000e-32 150.0
74 TraesCS2A01G272000 chr1A 90.909 110 7 3 1499 1606 556789183 556789291 1.900000e-30 145.0
75 TraesCS2A01G272000 chr5D 97.753 89 2 0 1516 1604 430647540 430647628 3.160000e-33 154.0
76 TraesCS2A01G272000 chr5D 97.674 86 2 0 1517 1602 413056177 413056262 1.470000e-31 148.0
77 TraesCS2A01G272000 chr5D 89.381 113 7 5 1500 1610 380084998 380084889 3.180000e-28 137.0
78 TraesCS2A01G272000 chr7A 89.916 119 10 2 1493 1610 558288834 558288717 1.140000e-32 152.0
79 TraesCS2A01G272000 chr1B 97.297 37 1 0 6185 6221 499890736 499890772 5.480000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G272000 chr2A 445330682 445337225 6543 False 12085.000000 12085 100.0000 1 6544 1 chr2A.!!$F3 6543
1 TraesCS2A01G272000 chr2A 428898987 428900919 1932 False 2819.000000 2819 92.9740 3127 5068 1 chr2A.!!$F2 1941
2 TraesCS2A01G272000 chr3D 421007741 421009990 2249 True 3310.000000 3310 93.3070 2825 5064 1 chr3D.!!$R1 2239
3 TraesCS2A01G272000 chr3D 578353703 578355947 2244 False 3264.000000 3264 92.9430 2825 5067 1 chr3D.!!$F3 2242
4 TraesCS2A01G272000 chr6D 325710060 325712304 2244 True 3214.000000 3214 92.5760 2825 5067 1 chr6D.!!$R2 2242
5 TraesCS2A01G272000 chrUn 67913816 67916045 2229 False 3109.000000 3109 91.8400 2825 5064 1 chrUn.!!$F1 2239
6 TraesCS2A01G272000 chr1D 303519571 303521791 2220 True 3109.000000 3109 91.9590 2836 5066 1 chr1D.!!$R1 2230
7 TraesCS2A01G272000 chr1D 349803582 349805320 1738 False 2632.000000 2632 94.0370 3263 4997 1 chr1D.!!$F1 1734
8 TraesCS2A01G272000 chr2D 448692161 448694117 1956 False 2964.000000 2964 94.1360 3125 5068 1 chr2D.!!$F2 1943
9 TraesCS2A01G272000 chr2D 606529828 606531759 1931 False 2832.000000 2832 93.1620 2830 4761 1 chr2D.!!$F3 1931
10 TraesCS2A01G272000 chr2D 538731349 538732846 1497 True 2274.000000 2274 94.2040 3578 5064 1 chr2D.!!$R1 1486
11 TraesCS2A01G272000 chr2D 334314180 334317180 3000 False 1615.333333 1881 96.0340 848 6180 3 chr2D.!!$F4 5332
12 TraesCS2A01G272000 chr2D 357875911 357876586 675 False 793.000000 793 87.8120 3 682 1 chr2D.!!$F1 679
13 TraesCS2A01G272000 chr6A 60234167 60236007 1840 False 2660.000000 2660 92.8420 2825 4656 1 chr6A.!!$F1 1831
14 TraesCS2A01G272000 chr6A 616185264 616187275 2011 False 2553.000000 2553 89.4330 2825 4896 1 chr6A.!!$F3 2071
15 TraesCS2A01G272000 chr7D 390228559 390230558 1999 False 2658.000000 2658 90.7200 3068 5067 1 chr7D.!!$F2 1999
16 TraesCS2A01G272000 chr2B 402675889 402678981 3092 False 1178.750000 1705 96.2985 840 6180 4 chr2B.!!$F2 5340
17 TraesCS2A01G272000 chr4D 508594269 508595170 901 True 1179.000000 1179 90.2200 4157 5064 1 chr4D.!!$R2 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 434 0.038166 TTCCTGCATCCCAACCTGAC 59.962 55.000 0.00 0.00 0.00 3.51 F
679 681 0.038251 TCCGTGCTACTGCTTGAGTG 60.038 55.000 0.00 0.00 40.48 3.51 F
680 682 0.038251 CCGTGCTACTGCTTGAGTGA 60.038 55.000 0.00 0.00 40.48 3.41 F
707 709 0.557238 ACCCTCCCATTGCATGCATA 59.443 50.000 23.37 12.94 0.00 3.14 F
1074 1076 0.836400 TCCCTTCCTCGCCTTCAACT 60.836 55.000 0.00 0.00 0.00 3.16 F
1527 1529 1.139058 GCAATGATGTACTCCCTCCGT 59.861 52.381 0.00 0.00 0.00 4.69 F
1531 1533 1.272816 TGATGTACTCCCTCCGTTCCA 60.273 52.381 0.00 0.00 0.00 3.53 F
2408 2424 1.674962 GCTCCAATGAATGAGTCAGGC 59.325 52.381 0.00 0.00 40.43 4.85 F
2827 2847 0.031716 AGCATCTCTAGCAGACCCCA 60.032 55.000 0.00 0.00 32.26 4.96 F
3248 3286 0.245539 CCTTTGCCAATGGTGCTCAG 59.754 55.000 0.00 0.00 0.00 3.35 F
3818 3865 0.806492 GCTACGGCCTCTAGCACAAC 60.806 60.000 19.57 0.00 46.50 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1587 1589 1.204231 GACAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.0 0.00 3.62 R
2436 2452 1.485066 ACTACCCATGGTTTCTAGCCG 59.515 52.381 11.73 0.0 37.09 5.52 R
2487 2503 2.160417 CGGAACAAATCTTCAGTGGCTC 59.840 50.000 0.00 0.0 0.00 4.70 R
2508 2524 4.223320 TGTTCCTTGCTTCGAAATTCAC 57.777 40.909 0.00 0.0 0.00 3.18 R
2808 2828 0.031716 TGGGGTCTGCTAGAGATGCT 60.032 55.000 0.00 0.0 31.63 3.79 R
2809 2829 0.105778 GTGGGGTCTGCTAGAGATGC 59.894 60.000 0.00 0.0 31.63 3.91 R
2821 2841 0.868177 CAAACGCGTTTTGTGGGGTC 60.868 55.000 33.05 0.0 39.96 4.46 R
3818 3865 1.136141 GCAAGTCTCGTGATGCAACAG 60.136 52.381 0.00 0.0 38.63 3.16 R
4804 4906 1.204786 TTTCCCCATCTCCTTCGCCA 61.205 55.000 0.00 0.0 0.00 5.69 R
5171 5282 3.190535 GCGTTTCATGACCTAACAACCAT 59.809 43.478 8.95 0.0 0.00 3.55 R
5791 5902 4.454847 GTCTAAGGACCAAAACAGGTTAGC 59.545 45.833 0.00 0.0 43.38 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 8.562892 AGATTTTTCCGATTTACTCATGCATAG 58.437 33.333 0.00 0.04 0.00 2.23
51 52 9.518906 CATGCATAGATCTGTAGATATCTCAAC 57.481 37.037 8.95 3.47 34.36 3.18
58 59 2.972713 TGTAGATATCTCAACAGGGGGC 59.027 50.000 8.95 0.00 0.00 5.80
71 72 0.412244 AGGGGGCCTTACTTTTTCCC 59.588 55.000 0.84 0.26 36.25 3.97
84 85 0.690192 TTTTCCCGAGCCATCTCACA 59.310 50.000 0.00 0.00 39.30 3.58
97 98 2.655090 TCTCACAAGCCATGGTTTCA 57.345 45.000 11.40 0.00 0.00 2.69
103 104 3.256383 CACAAGCCATGGTTTCAATGAGA 59.744 43.478 11.40 0.00 0.00 3.27
105 106 4.021719 ACAAGCCATGGTTTCAATGAGAAG 60.022 41.667 11.40 0.00 37.57 2.85
110 111 5.415701 GCCATGGTTTCAATGAGAAGAGTAA 59.584 40.000 14.67 0.00 37.57 2.24
111 112 6.096001 GCCATGGTTTCAATGAGAAGAGTAAT 59.904 38.462 14.67 0.00 37.57 1.89
112 113 7.283127 GCCATGGTTTCAATGAGAAGAGTAATA 59.717 37.037 14.67 0.00 37.57 0.98
121 122 9.599056 TCAATGAGAAGAGTAATATGGAGAGAT 57.401 33.333 0.00 0.00 0.00 2.75
130 131 9.023962 AGAGTAATATGGAGAGATTCATCAGAC 57.976 37.037 0.00 0.00 0.00 3.51
133 134 4.852134 ATGGAGAGATTCATCAGACTCG 57.148 45.455 0.00 0.00 34.98 4.18
145 146 3.420300 TCAGACTCGGTACTCTCTTGT 57.580 47.619 0.00 0.00 0.00 3.16
148 149 3.502595 CAGACTCGGTACTCTCTTGTGAA 59.497 47.826 0.00 0.00 0.00 3.18
154 155 2.159085 GGTACTCTCTTGTGAATCCCGG 60.159 54.545 0.00 0.00 0.00 5.73
173 174 1.639108 GGATGGGGTCTGGTTTACCTT 59.361 52.381 0.00 0.00 37.18 3.50
193 194 0.259647 CATGGGGAATGCAGGGAGAA 59.740 55.000 0.00 0.00 0.00 2.87
239 240 0.323725 GCCCATTTGAGCTCCAGGAA 60.324 55.000 12.15 1.30 0.00 3.36
256 257 4.281941 CCAGGAATCGATGAGGAGACATTA 59.718 45.833 0.00 0.00 0.00 1.90
260 261 7.117523 CAGGAATCGATGAGGAGACATTATTTC 59.882 40.741 0.00 0.00 0.00 2.17
267 268 8.834465 CGATGAGGAGACATTATTTCTTTTCAT 58.166 33.333 7.68 7.68 33.04 2.57
323 324 6.534634 CACCCTCTCTTTTTCTCTTTTAGGA 58.465 40.000 0.00 0.00 0.00 2.94
334 335 6.537453 TTCTCTTTTAGGATCTCTCACCAG 57.463 41.667 0.00 0.00 0.00 4.00
340 341 5.932027 TTAGGATCTCTCACCAGGATCTA 57.068 43.478 0.00 0.00 36.88 1.98
344 345 4.202567 GGATCTCTCACCAGGATCTAGTCT 60.203 50.000 0.00 0.00 36.88 3.24
346 347 6.297010 GGATCTCTCACCAGGATCTAGTCTAT 60.297 46.154 0.00 0.00 36.88 1.98
354 355 7.459444 TCACCAGGATCTAGTCTATCTCATAGA 59.541 40.741 0.00 0.00 39.46 1.98
377 378 5.176407 AGAAATCGTAGAAGTGATCTCCG 57.824 43.478 0.00 0.00 43.58 4.63
407 408 3.145286 CTCGGCTATCACAGAGATCTCA 58.855 50.000 24.39 4.15 38.19 3.27
431 432 1.108776 CATTCCTGCATCCCAACCTG 58.891 55.000 0.00 0.00 0.00 4.00
433 434 0.038166 TTCCTGCATCCCAACCTGAC 59.962 55.000 0.00 0.00 0.00 3.51
437 438 2.966732 GCATCCCAACCTGACCCGA 61.967 63.158 0.00 0.00 0.00 5.14
441 442 1.149627 CCCAACCTGACCCGAACAA 59.850 57.895 0.00 0.00 0.00 2.83
469 470 1.571919 CGGTGTAAGGTAGCTGCATC 58.428 55.000 3.61 0.00 0.00 3.91
470 471 1.134818 CGGTGTAAGGTAGCTGCATCA 60.135 52.381 3.61 0.00 0.00 3.07
475 476 5.105756 GGTGTAAGGTAGCTGCATCAATTTT 60.106 40.000 3.61 0.00 0.00 1.82
478 479 5.726980 AAGGTAGCTGCATCAATTTTCAA 57.273 34.783 3.61 0.00 0.00 2.69
496 497 0.178961 AAAGGAACCCCAACCAGAGC 60.179 55.000 0.00 0.00 33.88 4.09
500 501 2.417558 GAACCCCAACCAGAGCTGCT 62.418 60.000 0.00 0.00 0.00 4.24
508 509 3.369892 CCAACCAGAGCTGCTACATAAGT 60.370 47.826 0.15 0.00 0.00 2.24
512 513 3.382865 CCAGAGCTGCTACATAAGTCAGA 59.617 47.826 0.15 0.00 33.64 3.27
516 517 6.200665 CAGAGCTGCTACATAAGTCAGATTTC 59.799 42.308 0.15 0.00 33.64 2.17
565 566 3.707316 TGCTAACTTTAACCCATGCCAT 58.293 40.909 0.00 0.00 0.00 4.40
573 574 2.250921 AACCCATGCCATTTCCATCA 57.749 45.000 0.00 0.00 0.00 3.07
575 576 0.754472 CCCATGCCATTTCCATCACC 59.246 55.000 0.00 0.00 0.00 4.02
578 579 0.638292 ATGCCATTTCCATCACCCCT 59.362 50.000 0.00 0.00 0.00 4.79
581 582 2.043664 TGCCATTTCCATCACCCCTTTA 59.956 45.455 0.00 0.00 0.00 1.85
582 583 3.103742 GCCATTTCCATCACCCCTTTAA 58.896 45.455 0.00 0.00 0.00 1.52
591 592 1.146152 TCACCCCTTTAACCCCAACTG 59.854 52.381 0.00 0.00 0.00 3.16
592 593 0.178944 ACCCCTTTAACCCCAACTGC 60.179 55.000 0.00 0.00 0.00 4.40
596 597 2.557452 CCCTTTAACCCCAACTGCAGAT 60.557 50.000 23.35 5.41 0.00 2.90
605 606 2.037136 AACTGCAGATGACCAGCGC 61.037 57.895 23.35 0.00 32.37 5.92
643 645 0.872388 CCGCTGGTTTAAGTGTGACC 59.128 55.000 0.00 0.00 0.00 4.02
648 650 1.422402 TGGTTTAAGTGTGACCCTCCC 59.578 52.381 0.00 0.00 32.39 4.30
658 660 2.443632 TGTGACCCTCCCAACATAACAA 59.556 45.455 0.00 0.00 0.00 2.83
662 664 3.699538 GACCCTCCCAACATAACAAATCC 59.300 47.826 0.00 0.00 0.00 3.01
667 669 2.491693 CCCAACATAACAAATCCGTGCT 59.508 45.455 0.00 0.00 0.00 4.40
673 675 2.185004 AACAAATCCGTGCTACTGCT 57.815 45.000 0.00 0.00 40.48 4.24
674 676 2.185004 ACAAATCCGTGCTACTGCTT 57.815 45.000 0.00 0.00 40.48 3.91
675 677 1.806542 ACAAATCCGTGCTACTGCTTG 59.193 47.619 0.00 0.00 40.48 4.01
676 678 2.076100 CAAATCCGTGCTACTGCTTGA 58.924 47.619 0.00 0.00 40.48 3.02
677 679 2.015736 AATCCGTGCTACTGCTTGAG 57.984 50.000 0.00 0.00 40.48 3.02
678 680 0.898320 ATCCGTGCTACTGCTTGAGT 59.102 50.000 0.00 0.00 40.48 3.41
679 681 0.038251 TCCGTGCTACTGCTTGAGTG 60.038 55.000 0.00 0.00 40.48 3.51
680 682 0.038251 CCGTGCTACTGCTTGAGTGA 60.038 55.000 0.00 0.00 40.48 3.41
681 683 1.404717 CCGTGCTACTGCTTGAGTGAT 60.405 52.381 0.00 0.00 40.48 3.06
682 684 1.657594 CGTGCTACTGCTTGAGTGATG 59.342 52.381 0.00 0.00 40.48 3.07
683 685 2.672195 CGTGCTACTGCTTGAGTGATGA 60.672 50.000 0.00 0.00 40.48 2.92
684 686 3.329386 GTGCTACTGCTTGAGTGATGAA 58.671 45.455 0.00 0.00 40.48 2.57
685 687 3.748048 GTGCTACTGCTTGAGTGATGAAA 59.252 43.478 0.00 0.00 40.48 2.69
686 688 4.394300 GTGCTACTGCTTGAGTGATGAAAT 59.606 41.667 0.00 0.00 40.48 2.17
687 689 4.393990 TGCTACTGCTTGAGTGATGAAATG 59.606 41.667 0.00 0.00 40.48 2.32
688 690 4.633126 GCTACTGCTTGAGTGATGAAATGA 59.367 41.667 0.00 0.00 35.96 2.57
689 691 5.447010 GCTACTGCTTGAGTGATGAAATGAC 60.447 44.000 0.00 0.00 35.96 3.06
690 692 3.755378 ACTGCTTGAGTGATGAAATGACC 59.245 43.478 0.00 0.00 26.99 4.02
691 693 3.084039 TGCTTGAGTGATGAAATGACCC 58.916 45.455 0.00 0.00 26.99 4.46
692 694 3.245016 TGCTTGAGTGATGAAATGACCCT 60.245 43.478 0.00 0.00 26.99 4.34
693 695 3.376546 GCTTGAGTGATGAAATGACCCTC 59.623 47.826 0.00 0.00 26.99 4.30
694 696 3.634397 TGAGTGATGAAATGACCCTCC 57.366 47.619 0.00 0.00 26.99 4.30
695 697 2.239654 TGAGTGATGAAATGACCCTCCC 59.760 50.000 0.00 0.00 26.99 4.30
696 698 2.239654 GAGTGATGAAATGACCCTCCCA 59.760 50.000 0.00 0.00 26.99 4.37
697 699 2.854967 AGTGATGAAATGACCCTCCCAT 59.145 45.455 0.00 0.00 26.99 4.00
698 700 3.270433 AGTGATGAAATGACCCTCCCATT 59.730 43.478 0.00 0.00 35.92 3.16
699 701 3.382546 GTGATGAAATGACCCTCCCATTG 59.617 47.826 0.00 0.00 34.75 2.82
700 702 1.851304 TGAAATGACCCTCCCATTGC 58.149 50.000 0.00 0.00 34.75 3.56
701 703 1.076841 TGAAATGACCCTCCCATTGCA 59.923 47.619 0.00 0.00 37.25 4.08
702 704 2.292389 TGAAATGACCCTCCCATTGCAT 60.292 45.455 0.00 0.00 35.29 3.96
703 705 1.784358 AATGACCCTCCCATTGCATG 58.216 50.000 0.00 0.00 33.41 4.06
704 706 0.757935 ATGACCCTCCCATTGCATGC 60.758 55.000 11.82 11.82 0.00 4.06
705 707 1.380246 GACCCTCCCATTGCATGCA 60.380 57.895 18.46 18.46 0.00 3.96
706 708 0.757935 GACCCTCCCATTGCATGCAT 60.758 55.000 23.37 9.04 0.00 3.96
707 709 0.557238 ACCCTCCCATTGCATGCATA 59.443 50.000 23.37 12.94 0.00 3.14
708 710 1.254026 CCCTCCCATTGCATGCATAG 58.746 55.000 23.37 16.55 0.00 2.23
709 711 1.254026 CCTCCCATTGCATGCATAGG 58.746 55.000 23.37 24.15 0.00 2.57
710 712 1.479942 CCTCCCATTGCATGCATAGGT 60.480 52.381 27.42 12.18 0.00 3.08
711 713 2.313317 CTCCCATTGCATGCATAGGTT 58.687 47.619 27.42 9.20 0.00 3.50
712 714 2.033372 TCCCATTGCATGCATAGGTTG 58.967 47.619 27.42 17.90 0.00 3.77
730 732 9.903682 CATAGGTTGCTCCAATTAATAAATGAG 57.096 33.333 0.00 0.00 39.02 2.90
731 733 6.809869 AGGTTGCTCCAATTAATAAATGAGC 58.190 36.000 15.83 15.83 39.69 4.26
732 734 5.985530 GGTTGCTCCAATTAATAAATGAGCC 59.014 40.000 18.17 9.27 39.03 4.70
733 735 6.183360 GGTTGCTCCAATTAATAAATGAGCCT 60.183 38.462 18.17 0.00 39.03 4.58
734 736 7.014230 GGTTGCTCCAATTAATAAATGAGCCTA 59.986 37.037 18.17 9.29 39.03 3.93
735 737 8.413229 GTTGCTCCAATTAATAAATGAGCCTAA 58.587 33.333 18.17 9.57 39.03 2.69
736 738 8.710749 TGCTCCAATTAATAAATGAGCCTAAT 57.289 30.769 18.17 0.00 39.03 1.73
737 739 9.146586 TGCTCCAATTAATAAATGAGCCTAATT 57.853 29.630 18.17 0.00 39.03 1.40
752 754 9.745018 ATGAGCCTAATTAATATGCATACAACT 57.255 29.630 8.99 0.00 0.00 3.16
767 769 8.234136 TGCATACAACTAATACTACTACTGCT 57.766 34.615 0.00 0.00 0.00 4.24
768 770 8.692710 TGCATACAACTAATACTACTACTGCTT 58.307 33.333 0.00 0.00 0.00 3.91
769 771 9.182933 GCATACAACTAATACTACTACTGCTTC 57.817 37.037 0.00 0.00 0.00 3.86
770 772 9.383462 CATACAACTAATACTACTACTGCTTCG 57.617 37.037 0.00 0.00 0.00 3.79
771 773 6.793349 ACAACTAATACTACTACTGCTTCGG 58.207 40.000 0.00 0.00 0.00 4.30
772 774 5.435820 ACTAATACTACTACTGCTTCGGC 57.564 43.478 0.00 0.00 42.19 5.54
789 791 7.023197 GCTTCGGCACTTTATTATTTTAGGA 57.977 36.000 0.00 0.00 41.33 2.94
790 792 6.910972 GCTTCGGCACTTTATTATTTTAGGAC 59.089 38.462 0.00 0.00 41.33 3.85
791 793 7.201705 GCTTCGGCACTTTATTATTTTAGGACT 60.202 37.037 0.00 0.00 41.33 3.85
792 794 9.321562 CTTCGGCACTTTATTATTTTAGGACTA 57.678 33.333 0.00 0.00 0.00 2.59
793 795 9.841295 TTCGGCACTTTATTATTTTAGGACTAT 57.159 29.630 0.00 0.00 0.00 2.12
794 796 9.485206 TCGGCACTTTATTATTTTAGGACTATC 57.515 33.333 0.00 0.00 0.00 2.08
795 797 9.490379 CGGCACTTTATTATTTTAGGACTATCT 57.510 33.333 0.00 0.00 0.00 1.98
808 810 9.856162 TTTTAGGACTATCTGGTTTTTGTTACT 57.144 29.630 0.00 0.00 0.00 2.24
811 813 8.431910 AGGACTATCTGGTTTTTGTTACTAGA 57.568 34.615 0.00 0.00 37.49 2.43
812 814 9.047947 AGGACTATCTGGTTTTTGTTACTAGAT 57.952 33.333 0.00 0.00 43.50 1.98
813 815 9.099454 GGACTATCTGGTTTTTGTTACTAGATG 57.901 37.037 10.81 5.29 41.88 2.90
814 816 9.654663 GACTATCTGGTTTTTGTTACTAGATGT 57.345 33.333 10.81 7.65 41.88 3.06
815 817 9.654663 ACTATCTGGTTTTTGTTACTAGATGTC 57.345 33.333 10.81 0.00 41.88 3.06
816 818 9.877178 CTATCTGGTTTTTGTTACTAGATGTCT 57.123 33.333 10.81 0.00 41.88 3.41
817 819 7.962964 TCTGGTTTTTGTTACTAGATGTCTG 57.037 36.000 0.00 0.00 29.52 3.51
818 820 6.426937 TCTGGTTTTTGTTACTAGATGTCTGC 59.573 38.462 0.00 0.00 29.52 4.26
819 821 5.472137 TGGTTTTTGTTACTAGATGTCTGCC 59.528 40.000 0.00 0.00 0.00 4.85
820 822 5.705905 GGTTTTTGTTACTAGATGTCTGCCT 59.294 40.000 0.00 0.00 0.00 4.75
821 823 6.348540 GGTTTTTGTTACTAGATGTCTGCCTG 60.349 42.308 0.00 0.00 0.00 4.85
822 824 5.738619 TTTGTTACTAGATGTCTGCCTGA 57.261 39.130 0.00 0.00 0.00 3.86
823 825 5.939764 TTGTTACTAGATGTCTGCCTGAT 57.060 39.130 0.00 0.00 0.00 2.90
824 826 5.268118 TGTTACTAGATGTCTGCCTGATG 57.732 43.478 0.00 0.00 0.00 3.07
825 827 2.906691 ACTAGATGTCTGCCTGATGC 57.093 50.000 0.00 0.00 41.77 3.91
834 836 2.887568 GCCTGATGCACCGAGACG 60.888 66.667 0.00 0.00 40.77 4.18
1074 1076 0.836400 TCCCTTCCTCGCCTTCAACT 60.836 55.000 0.00 0.00 0.00 3.16
1141 1143 1.741770 ATCTCGTTCTTGGCACCGC 60.742 57.895 0.00 0.00 0.00 5.68
1520 1522 7.776933 TCAGTTATTCAGCAATGATGTACTC 57.223 36.000 0.00 0.00 0.00 2.59
1521 1523 6.763135 TCAGTTATTCAGCAATGATGTACTCC 59.237 38.462 0.00 0.00 0.00 3.85
1522 1524 6.017605 CAGTTATTCAGCAATGATGTACTCCC 60.018 42.308 0.00 0.00 0.00 4.30
1523 1525 4.785346 ATTCAGCAATGATGTACTCCCT 57.215 40.909 0.00 0.00 0.00 4.20
1524 1526 3.827008 TCAGCAATGATGTACTCCCTC 57.173 47.619 0.00 0.00 0.00 4.30
1525 1527 2.435805 TCAGCAATGATGTACTCCCTCC 59.564 50.000 0.00 0.00 0.00 4.30
1526 1528 1.414181 AGCAATGATGTACTCCCTCCG 59.586 52.381 0.00 0.00 0.00 4.63
1527 1529 1.139058 GCAATGATGTACTCCCTCCGT 59.861 52.381 0.00 0.00 0.00 4.69
1528 1530 2.420129 GCAATGATGTACTCCCTCCGTT 60.420 50.000 0.00 0.00 0.00 4.44
1529 1531 3.458189 CAATGATGTACTCCCTCCGTTC 58.542 50.000 0.00 0.00 0.00 3.95
1530 1532 1.481871 TGATGTACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
1531 1533 1.272816 TGATGTACTCCCTCCGTTCCA 60.273 52.381 0.00 0.00 0.00 3.53
1532 1534 1.829222 GATGTACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
1533 1535 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
1534 1536 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
1535 1537 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
1536 1538 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
1537 1539 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1538 1540 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1539 1541 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1540 1542 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1541 1543 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1542 1544 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1543 1545 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1544 1546 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1545 1547 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1546 1548 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1547 1549 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
1548 1550 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
1549 1551 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
1550 1552 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
1551 1553 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
1552 1554 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
1553 1555 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
1554 1556 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
1555 1557 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
1588 1590 9.408648 AGTATAAAGTTGGGTCATCTATTTTGG 57.591 33.333 0.00 0.00 0.00 3.28
1589 1591 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
1590 1592 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
1591 1593 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1592 1594 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1593 1595 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1594 1596 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1595 1597 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
1596 1598 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1597 1599 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1598 1600 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1599 1601 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
1600 1602 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
1601 1603 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
1602 1604 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
1603 1605 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
1652 1654 9.398170 GTATAGATCACATAATTTGCGCATTTT 57.602 29.630 12.75 10.90 0.00 1.82
1654 1656 6.331845 AGATCACATAATTTGCGCATTTTGA 58.668 32.000 12.75 9.64 0.00 2.69
1655 1657 6.982141 AGATCACATAATTTGCGCATTTTGAT 59.018 30.769 12.75 13.82 0.00 2.57
1659 1661 6.018588 CACATAATTTGCGCATTTTGATGGAT 60.019 34.615 12.75 0.00 0.00 3.41
1681 1683 7.774157 TGGATAAGTGACTACTCCTTAGTACTG 59.226 40.741 5.39 0.00 41.48 2.74
1696 1698 6.776116 CCTTAGTACTGGTATCTATGTGGACA 59.224 42.308 5.39 0.00 0.00 4.02
1705 1707 6.069673 TGGTATCTATGTGGACAAACTGGAAT 60.070 38.462 0.00 0.00 0.00 3.01
1710 1712 7.432869 TCTATGTGGACAAACTGGAATTTTTG 58.567 34.615 0.00 0.00 38.45 2.44
1716 1725 6.553100 TGGACAAACTGGAATTTTTGGTATCT 59.447 34.615 5.56 0.00 37.08 1.98
1772 1781 6.573664 ACAACTTGCTTAATGATTGTGCTA 57.426 33.333 5.98 0.00 0.00 3.49
1776 1785 7.452880 ACTTGCTTAATGATTGTGCTAGAAA 57.547 32.000 16.75 0.00 32.58 2.52
1793 1802 9.162764 GTGCTAGAAATAAAGATTCACTTGGTA 57.837 33.333 0.00 0.00 38.98 3.25
1884 1893 4.744570 CTTCACTCTACGGTTGCATTCTA 58.255 43.478 0.00 0.00 0.00 2.10
1897 1906 8.134895 ACGGTTGCATTCTATTATGTTTATTGG 58.865 33.333 0.00 0.00 0.00 3.16
2116 2125 2.776694 CGAGAATGTTGAGTTGCTCG 57.223 50.000 0.00 0.00 39.12 5.03
2408 2424 1.674962 GCTCCAATGAATGAGTCAGGC 59.325 52.381 0.00 0.00 40.43 4.85
2436 2452 5.475564 TGGAAGGGATTACAGTTTTAGTTGC 59.524 40.000 0.00 0.00 0.00 4.17
2438 2454 4.007659 AGGGATTACAGTTTTAGTTGCGG 58.992 43.478 0.00 0.00 0.00 5.69
2441 2457 4.632688 GGATTACAGTTTTAGTTGCGGCTA 59.367 41.667 0.00 0.00 0.00 3.93
2443 2459 3.396260 ACAGTTTTAGTTGCGGCTAGA 57.604 42.857 0.00 0.00 0.00 2.43
2494 2510 1.717032 TGAACCAGTACAGAGCCACT 58.283 50.000 0.00 0.00 0.00 4.00
2508 2524 2.154462 AGCCACTGAAGATTTGTTCCG 58.846 47.619 0.00 0.00 0.00 4.30
2517 2533 5.448438 TGAAGATTTGTTCCGTGAATTTCG 58.552 37.500 0.00 0.00 0.00 3.46
2518 2534 5.237561 TGAAGATTTGTTCCGTGAATTTCGA 59.762 36.000 5.73 0.00 0.00 3.71
2710 2726 7.862512 TGAAAACAGATTTCTTGCCAAATTT 57.137 28.000 4.91 0.00 46.27 1.82
2711 2727 8.954950 TGAAAACAGATTTCTTGCCAAATTTA 57.045 26.923 4.91 0.00 46.27 1.40
2721 2737 8.498054 TTTCTTGCCAAATTTAACACAATTCA 57.502 26.923 0.00 0.00 0.00 2.57
2735 2751 4.109766 CACAATTCATTCTACGCCGAGTA 58.890 43.478 0.00 0.00 0.00 2.59
2748 2764 2.727916 CGCCGAGTAATTTGCAGAAACC 60.728 50.000 0.00 0.00 0.00 3.27
2753 2769 4.546570 GAGTAATTTGCAGAAACCGCTTT 58.453 39.130 0.00 0.00 0.00 3.51
2810 2830 7.708051 TGTGATGTAGTACTCATTCTTAGAGC 58.292 38.462 0.00 0.00 36.58 4.09
2811 2831 7.339466 TGTGATGTAGTACTCATTCTTAGAGCA 59.661 37.037 0.00 0.00 36.58 4.26
2812 2832 8.356657 GTGATGTAGTACTCATTCTTAGAGCAT 58.643 37.037 0.00 0.00 36.58 3.79
2827 2847 0.031716 AGCATCTCTAGCAGACCCCA 60.032 55.000 0.00 0.00 32.26 4.96
2928 2949 5.011329 AGACCCGTATAAAAGGATATTCGCA 59.989 40.000 0.00 0.00 0.00 5.10
3016 3039 2.156891 CGGTCCGCAAATATCAATACCG 59.843 50.000 0.00 0.00 42.12 4.02
3123 3150 6.855836 ACACAATACAACAATCATCCACATC 58.144 36.000 0.00 0.00 0.00 3.06
3130 3157 6.761312 ACAACAATCATCCACATCACAAATT 58.239 32.000 0.00 0.00 0.00 1.82
3248 3286 0.245539 CCTTTGCCAATGGTGCTCAG 59.754 55.000 0.00 0.00 0.00 3.35
3539 3584 2.270352 TCAATGTCTTTTCGGGCTGT 57.730 45.000 0.00 0.00 0.00 4.40
3679 3725 4.568072 TGCCCATTGATAGTGTAGTTGT 57.432 40.909 0.00 0.00 0.00 3.32
3731 3777 2.774439 AACAAATGAGACCGTTGCAC 57.226 45.000 0.00 0.00 0.00 4.57
3794 3841 5.131475 AGCAATGCCAAATCCATAAATCCTT 59.869 36.000 0.00 0.00 0.00 3.36
3818 3865 0.806492 GCTACGGCCTCTAGCACAAC 60.806 60.000 19.57 0.00 46.50 3.32
4105 4153 1.949525 GAACGCCATATGCAATCACCT 59.050 47.619 0.00 0.00 41.33 4.00
4230 4283 1.218047 CACAAAGAGGGATCGGCGA 59.782 57.895 13.87 13.87 0.00 5.54
4688 4777 1.361993 CTCTTCTCGCCGGATCCAG 59.638 63.158 13.41 0.36 0.00 3.86
4689 4778 2.081425 CTCTTCTCGCCGGATCCAGG 62.081 65.000 13.41 14.81 0.00 4.45
4862 4970 4.257654 TCCCGCCAACCGCTTCAA 62.258 61.111 0.00 0.00 35.03 2.69
5141 5252 6.997655 TGATATCTCGCTGATATTTTCTGGT 58.002 36.000 3.98 0.00 45.52 4.00
5171 5282 1.556911 GGATTCTTGAGAGGCAGTCCA 59.443 52.381 0.00 0.00 33.74 4.02
5311 5422 3.354948 TGTCCACTTCCATGAATCCAG 57.645 47.619 0.00 0.00 0.00 3.86
5808 5919 5.007682 TGATTAGCTAACCTGTTTTGGTCC 58.992 41.667 8.70 0.00 39.83 4.46
5944 6055 5.464168 TGTATACATCTCTGATGCATCGTG 58.536 41.667 21.34 16.14 0.00 4.35
5950 6061 2.954318 TCTCTGATGCATCGTGATCTCA 59.046 45.455 21.34 2.16 0.00 3.27
6042 6159 9.944376 AAAGAAATAGTCTGCATCTGTACTAAA 57.056 29.630 0.00 0.00 36.40 1.85
6186 6394 4.654091 CTCTCTTCAAGAGGTCTCCATC 57.346 50.000 14.72 0.00 46.73 3.51
6187 6395 3.020274 TCTCTTCAAGAGGTCTCCATCG 58.980 50.000 14.72 0.00 42.54 3.84
6188 6396 1.478510 TCTTCAAGAGGTCTCCATCGC 59.521 52.381 0.00 0.00 0.00 4.58
6189 6397 0.173481 TTCAAGAGGTCTCCATCGCG 59.827 55.000 0.00 0.00 0.00 5.87
6190 6398 1.880340 CAAGAGGTCTCCATCGCGC 60.880 63.158 0.00 0.00 0.00 6.86
6191 6399 2.351244 AAGAGGTCTCCATCGCGCA 61.351 57.895 8.75 0.00 0.00 6.09
6192 6400 2.279120 GAGGTCTCCATCGCGCAG 60.279 66.667 8.75 0.00 0.00 5.18
6213 6421 2.653448 CGCTGGATCGCTGTCTCG 60.653 66.667 0.00 0.00 0.00 4.04
6214 6422 2.801421 GCTGGATCGCTGTCTCGA 59.199 61.111 0.00 0.00 43.09 4.04
6215 6423 1.299014 GCTGGATCGCTGTCTCGAG 60.299 63.158 5.93 5.93 42.14 4.04
6216 6424 1.299014 CTGGATCGCTGTCTCGAGC 60.299 63.158 7.81 3.58 43.31 5.03
6237 6445 3.943034 CGCGAGAGAGCCGTCGAT 61.943 66.667 0.00 0.00 38.50 3.59
6238 6446 2.409651 GCGAGAGAGCCGTCGATT 59.590 61.111 0.00 0.00 38.50 3.34
6239 6447 1.941734 GCGAGAGAGCCGTCGATTG 60.942 63.158 0.00 0.00 38.50 2.67
6240 6448 1.429825 CGAGAGAGCCGTCGATTGT 59.570 57.895 0.00 0.00 38.50 2.71
6241 6449 0.179161 CGAGAGAGCCGTCGATTGTT 60.179 55.000 0.00 0.00 38.50 2.83
6242 6450 1.272781 GAGAGAGCCGTCGATTGTTG 58.727 55.000 0.00 0.00 0.00 3.33
6243 6451 0.737715 AGAGAGCCGTCGATTGTTGC 60.738 55.000 0.00 0.00 0.00 4.17
6244 6452 2.014093 GAGAGCCGTCGATTGTTGCG 62.014 60.000 0.00 0.00 0.00 4.85
6245 6453 2.048597 AGCCGTCGATTGTTGCGA 60.049 55.556 0.00 0.00 35.08 5.10
6246 6454 1.421410 GAGCCGTCGATTGTTGCGAT 61.421 55.000 0.00 0.00 40.19 4.58
6247 6455 1.296867 GCCGTCGATTGTTGCGATG 60.297 57.895 0.00 0.00 42.67 3.84
6248 6456 4.953116 CGTCGATTGTTGCGATGG 57.047 55.556 0.00 0.00 40.17 3.51
6249 6457 2.368856 CGTCGATTGTTGCGATGGA 58.631 52.632 0.00 0.00 40.17 3.41
6250 6458 0.930310 CGTCGATTGTTGCGATGGAT 59.070 50.000 0.00 0.00 40.17 3.41
6251 6459 1.071239 CGTCGATTGTTGCGATGGATC 60.071 52.381 0.00 0.00 40.17 3.36
6261 6469 3.635204 GATGGATCGAAGCGCCAG 58.365 61.111 2.29 0.00 34.28 4.85
6262 6470 1.958205 GATGGATCGAAGCGCCAGG 60.958 63.158 2.29 0.00 34.28 4.45
6263 6471 2.369257 GATGGATCGAAGCGCCAGGA 62.369 60.000 2.29 0.00 34.28 3.86
6264 6472 1.971505 ATGGATCGAAGCGCCAGGAA 61.972 55.000 2.29 0.00 34.28 3.36
6265 6473 1.884926 GGATCGAAGCGCCAGGAAG 60.885 63.158 2.29 0.00 0.00 3.46
6266 6474 1.141881 GATCGAAGCGCCAGGAAGA 59.858 57.895 2.29 0.00 0.00 2.87
6267 6475 1.148759 GATCGAAGCGCCAGGAAGAC 61.149 60.000 2.29 0.00 0.00 3.01
6268 6476 1.888436 ATCGAAGCGCCAGGAAGACA 61.888 55.000 2.29 0.00 0.00 3.41
6269 6477 1.448540 CGAAGCGCCAGGAAGACAT 60.449 57.895 2.29 0.00 0.00 3.06
6270 6478 1.424493 CGAAGCGCCAGGAAGACATC 61.424 60.000 2.29 0.00 0.00 3.06
6278 6486 4.094684 GGAAGACATCCGACAGCG 57.905 61.111 0.00 0.00 38.79 5.18
6288 6496 2.637025 CGACAGCGGTTTTGGTGG 59.363 61.111 0.00 0.00 41.54 4.61
6289 6497 2.903547 CGACAGCGGTTTTGGTGGG 61.904 63.158 0.00 0.00 41.54 4.61
6290 6498 2.520741 ACAGCGGTTTTGGTGGGG 60.521 61.111 0.00 0.00 41.54 4.96
6291 6499 3.989787 CAGCGGTTTTGGTGGGGC 61.990 66.667 0.00 0.00 33.81 5.80
6294 6502 3.302344 CGGTTTTGGTGGGGCCTG 61.302 66.667 0.84 0.00 38.35 4.85
6295 6503 2.123033 GGTTTTGGTGGGGCCTGT 60.123 61.111 0.84 0.00 38.35 4.00
6296 6504 2.506957 GGTTTTGGTGGGGCCTGTG 61.507 63.158 0.84 0.00 38.35 3.66
6297 6505 1.456705 GTTTTGGTGGGGCCTGTGA 60.457 57.895 0.84 0.00 38.35 3.58
6298 6506 1.045911 GTTTTGGTGGGGCCTGTGAA 61.046 55.000 0.84 0.00 38.35 3.18
6299 6507 1.045911 TTTTGGTGGGGCCTGTGAAC 61.046 55.000 0.84 0.00 38.35 3.18
6300 6508 2.230189 TTTGGTGGGGCCTGTGAACA 62.230 55.000 0.84 0.00 38.35 3.18
6301 6509 2.282462 GGTGGGGCCTGTGAACAG 60.282 66.667 0.84 3.35 43.40 3.16
6302 6510 2.515901 GTGGGGCCTGTGAACAGT 59.484 61.111 0.84 0.00 42.27 3.55
6303 6511 1.758592 GTGGGGCCTGTGAACAGTA 59.241 57.895 0.84 0.00 42.27 2.74
6304 6512 0.109723 GTGGGGCCTGTGAACAGTAA 59.890 55.000 0.84 0.00 42.27 2.24
6305 6513 1.072266 TGGGGCCTGTGAACAGTAAT 58.928 50.000 0.84 0.00 42.27 1.89
6306 6514 1.427368 TGGGGCCTGTGAACAGTAATT 59.573 47.619 0.84 0.00 42.27 1.40
6307 6515 2.092323 GGGGCCTGTGAACAGTAATTC 58.908 52.381 0.84 0.00 42.27 2.17
6308 6516 2.092323 GGGCCTGTGAACAGTAATTCC 58.908 52.381 0.84 3.01 42.27 3.01
6309 6517 2.554344 GGGCCTGTGAACAGTAATTCCA 60.554 50.000 0.84 0.00 42.27 3.53
6310 6518 2.749621 GGCCTGTGAACAGTAATTCCAG 59.250 50.000 9.49 0.00 42.27 3.86
6311 6519 2.749621 GCCTGTGAACAGTAATTCCAGG 59.250 50.000 9.49 14.01 43.20 4.45
6312 6520 3.347216 CCTGTGAACAGTAATTCCAGGG 58.653 50.000 9.49 0.00 42.27 4.45
6313 6521 3.347216 CTGTGAACAGTAATTCCAGGGG 58.653 50.000 2.14 0.00 39.09 4.79
6314 6522 2.983192 TGTGAACAGTAATTCCAGGGGA 59.017 45.455 0.00 0.00 0.00 4.81
6315 6523 3.396276 TGTGAACAGTAATTCCAGGGGAA 59.604 43.478 0.00 0.00 46.39 3.97
6316 6524 4.141135 TGTGAACAGTAATTCCAGGGGAAA 60.141 41.667 1.25 0.00 45.41 3.13
6317 6525 4.830600 GTGAACAGTAATTCCAGGGGAAAA 59.169 41.667 1.25 0.00 45.41 2.29
6318 6526 5.480422 GTGAACAGTAATTCCAGGGGAAAAT 59.520 40.000 1.25 0.00 45.41 1.82
6319 6527 5.714806 TGAACAGTAATTCCAGGGGAAAATC 59.285 40.000 1.25 0.00 45.41 2.17
6320 6528 5.269554 ACAGTAATTCCAGGGGAAAATCA 57.730 39.130 1.25 0.00 45.41 2.57
6321 6529 5.016831 ACAGTAATTCCAGGGGAAAATCAC 58.983 41.667 1.25 0.00 45.41 3.06
6322 6530 4.402474 CAGTAATTCCAGGGGAAAATCACC 59.598 45.833 1.25 0.00 45.41 4.02
6323 6531 2.550277 ATTCCAGGGGAAAATCACCC 57.450 50.000 1.25 0.00 42.28 4.61
6328 6536 3.284336 GGGAAAATCACCCCGCAC 58.716 61.111 0.00 0.00 41.38 5.34
6329 6537 2.348104 GGGAAAATCACCCCGCACC 61.348 63.158 0.00 0.00 41.38 5.01
6330 6538 1.605165 GGAAAATCACCCCGCACCA 60.605 57.895 0.00 0.00 0.00 4.17
6331 6539 1.584495 GAAAATCACCCCGCACCAC 59.416 57.895 0.00 0.00 0.00 4.16
6332 6540 1.873270 GAAAATCACCCCGCACCACC 61.873 60.000 0.00 0.00 0.00 4.61
6333 6541 4.715523 AATCACCCCGCACCACCG 62.716 66.667 0.00 0.00 0.00 4.94
6343 6551 4.410400 CACCACCGCTCCCCTTCC 62.410 72.222 0.00 0.00 0.00 3.46
6344 6552 4.658786 ACCACCGCTCCCCTTCCT 62.659 66.667 0.00 0.00 0.00 3.36
6345 6553 3.787001 CCACCGCTCCCCTTCCTC 61.787 72.222 0.00 0.00 0.00 3.71
6346 6554 3.787001 CACCGCTCCCCTTCCTCC 61.787 72.222 0.00 0.00 0.00 4.30
6347 6555 4.012721 ACCGCTCCCCTTCCTCCT 62.013 66.667 0.00 0.00 0.00 3.69
6348 6556 3.157949 CCGCTCCCCTTCCTCCTC 61.158 72.222 0.00 0.00 0.00 3.71
6349 6557 3.157949 CGCTCCCCTTCCTCCTCC 61.158 72.222 0.00 0.00 0.00 4.30
6350 6558 2.770475 GCTCCCCTTCCTCCTCCC 60.770 72.222 0.00 0.00 0.00 4.30
6351 6559 3.124088 CTCCCCTTCCTCCTCCCT 58.876 66.667 0.00 0.00 0.00 4.20
6352 6560 1.962570 GCTCCCCTTCCTCCTCCCTA 61.963 65.000 0.00 0.00 0.00 3.53
6353 6561 0.871024 CTCCCCTTCCTCCTCCCTAT 59.129 60.000 0.00 0.00 0.00 2.57
6354 6562 1.224381 CTCCCCTTCCTCCTCCCTATT 59.776 57.143 0.00 0.00 0.00 1.73
6355 6563 1.223337 TCCCCTTCCTCCTCCCTATTC 59.777 57.143 0.00 0.00 0.00 1.75
6356 6564 1.224381 CCCCTTCCTCCTCCCTATTCT 59.776 57.143 0.00 0.00 0.00 2.40
6357 6565 2.334023 CCCTTCCTCCTCCCTATTCTG 58.666 57.143 0.00 0.00 0.00 3.02
6358 6566 2.360854 CCCTTCCTCCTCCCTATTCTGT 60.361 54.545 0.00 0.00 0.00 3.41
6359 6567 3.388913 CCTTCCTCCTCCCTATTCTGTT 58.611 50.000 0.00 0.00 0.00 3.16
6360 6568 3.783082 CCTTCCTCCTCCCTATTCTGTTT 59.217 47.826 0.00 0.00 0.00 2.83
6361 6569 4.384647 CCTTCCTCCTCCCTATTCTGTTTG 60.385 50.000 0.00 0.00 0.00 2.93
6362 6570 2.505819 TCCTCCTCCCTATTCTGTTTGC 59.494 50.000 0.00 0.00 0.00 3.68
6363 6571 2.239654 CCTCCTCCCTATTCTGTTTGCA 59.760 50.000 0.00 0.00 0.00 4.08
6364 6572 3.539604 CTCCTCCCTATTCTGTTTGCAG 58.460 50.000 0.00 0.00 43.87 4.41
6365 6573 2.239654 TCCTCCCTATTCTGTTTGCAGG 59.760 50.000 0.00 0.00 42.78 4.85
6366 6574 2.019984 CTCCCTATTCTGTTTGCAGGC 58.980 52.381 0.00 0.00 42.78 4.85
6367 6575 0.734889 CCCTATTCTGTTTGCAGGCG 59.265 55.000 0.00 0.00 42.78 5.52
6368 6576 1.678728 CCCTATTCTGTTTGCAGGCGA 60.679 52.381 0.00 0.00 42.78 5.54
6369 6577 1.398390 CCTATTCTGTTTGCAGGCGAC 59.602 52.381 0.00 0.00 42.78 5.19
6370 6578 1.061131 CTATTCTGTTTGCAGGCGACG 59.939 52.381 0.00 0.00 42.78 5.12
6371 6579 1.577328 ATTCTGTTTGCAGGCGACGG 61.577 55.000 0.00 0.00 42.78 4.79
6372 6580 3.726517 CTGTTTGCAGGCGACGGG 61.727 66.667 0.00 0.00 39.01 5.28
6373 6581 4.243008 TGTTTGCAGGCGACGGGA 62.243 61.111 0.00 0.00 0.00 5.14
6374 6582 3.423154 GTTTGCAGGCGACGGGAG 61.423 66.667 0.00 0.00 0.00 4.30
6375 6583 3.621805 TTTGCAGGCGACGGGAGA 61.622 61.111 0.00 0.00 0.00 3.71
6376 6584 3.589654 TTTGCAGGCGACGGGAGAG 62.590 63.158 0.00 0.00 0.00 3.20
6387 6595 4.129148 GGGAGAGGCGGGGCAATT 62.129 66.667 0.00 0.00 0.00 2.32
6388 6596 2.043953 GGAGAGGCGGGGCAATTT 60.044 61.111 0.00 0.00 0.00 1.82
6389 6597 2.121538 GGAGAGGCGGGGCAATTTC 61.122 63.158 0.00 0.00 0.00 2.17
6390 6598 1.077429 GAGAGGCGGGGCAATTTCT 60.077 57.895 0.00 0.00 0.00 2.52
6391 6599 1.379044 AGAGGCGGGGCAATTTCTG 60.379 57.895 0.00 0.00 0.00 3.02
6399 6607 4.792106 GCAATTTCTGCGCCGATT 57.208 50.000 4.18 0.00 42.37 3.34
6400 6608 2.570393 GCAATTTCTGCGCCGATTC 58.430 52.632 4.18 0.00 42.37 2.52
6401 6609 0.179166 GCAATTTCTGCGCCGATTCA 60.179 50.000 4.18 0.00 42.37 2.57
6402 6610 1.538276 CAATTTCTGCGCCGATTCAC 58.462 50.000 4.18 0.00 0.00 3.18
6403 6611 0.451783 AATTTCTGCGCCGATTCACC 59.548 50.000 4.18 0.00 0.00 4.02
6404 6612 1.705337 ATTTCTGCGCCGATTCACCG 61.705 55.000 4.18 0.00 0.00 4.94
6405 6613 3.583276 TTCTGCGCCGATTCACCGT 62.583 57.895 4.18 0.00 0.00 4.83
6406 6614 3.554692 CTGCGCCGATTCACCGTC 61.555 66.667 4.18 0.00 0.00 4.79
6407 6615 4.365505 TGCGCCGATTCACCGTCA 62.366 61.111 4.18 0.00 0.00 4.35
6408 6616 3.849953 GCGCCGATTCACCGTCAC 61.850 66.667 0.00 0.00 0.00 3.67
6409 6617 3.541831 CGCCGATTCACCGTCACG 61.542 66.667 0.00 0.00 0.00 4.35
6419 6627 4.323477 CCGTCACGGGAAGGCCAA 62.323 66.667 8.94 0.00 44.15 4.52
6420 6628 3.047877 CGTCACGGGAAGGCCAAC 61.048 66.667 5.01 0.00 35.15 3.77
6421 6629 2.671963 GTCACGGGAAGGCCAACC 60.672 66.667 5.01 7.71 35.15 3.77
6422 6630 3.172106 TCACGGGAAGGCCAACCA 61.172 61.111 17.77 0.00 39.06 3.67
6423 6631 2.035626 CACGGGAAGGCCAACCAT 59.964 61.111 17.77 4.86 39.06 3.55
6424 6632 2.035626 ACGGGAAGGCCAACCATG 59.964 61.111 17.77 12.41 39.06 3.66
6433 6641 2.440796 CCAACCATGGGCGCATCT 60.441 61.111 18.09 0.00 43.51 2.90
6434 6642 2.484062 CCAACCATGGGCGCATCTC 61.484 63.158 18.09 0.00 43.51 2.75
6435 6643 2.514592 AACCATGGGCGCATCTCG 60.515 61.111 18.09 6.86 42.12 4.04
6467 6675 4.992511 GGTAACCACCGCACCGCA 62.993 66.667 0.00 0.00 34.36 5.69
6468 6676 3.419759 GTAACCACCGCACCGCAG 61.420 66.667 0.00 0.00 0.00 5.18
6481 6689 1.794222 CCGCAGGCTACCTTTTTCG 59.206 57.895 0.00 0.00 46.14 3.46
6482 6690 1.134694 CGCAGGCTACCTTTTTCGC 59.865 57.895 0.00 0.00 0.00 4.70
6483 6691 1.573829 CGCAGGCTACCTTTTTCGCA 61.574 55.000 0.00 0.00 0.00 5.10
6484 6692 0.811281 GCAGGCTACCTTTTTCGCAT 59.189 50.000 0.00 0.00 0.00 4.73
6485 6693 1.202348 GCAGGCTACCTTTTTCGCATT 59.798 47.619 0.00 0.00 0.00 3.56
6486 6694 2.732282 GCAGGCTACCTTTTTCGCATTC 60.732 50.000 0.00 0.00 0.00 2.67
6487 6695 1.737793 AGGCTACCTTTTTCGCATTCG 59.262 47.619 0.00 0.00 0.00 3.34
6488 6696 1.735571 GGCTACCTTTTTCGCATTCGA 59.264 47.619 0.00 0.00 43.89 3.71
6489 6697 2.354821 GGCTACCTTTTTCGCATTCGAT 59.645 45.455 0.00 0.00 45.04 3.59
6490 6698 3.181500 GGCTACCTTTTTCGCATTCGATT 60.181 43.478 0.00 0.00 45.04 3.34
6491 6699 4.412207 GCTACCTTTTTCGCATTCGATTT 58.588 39.130 0.00 0.00 45.04 2.17
6492 6700 4.495828 GCTACCTTTTTCGCATTCGATTTC 59.504 41.667 0.00 0.00 45.04 2.17
6493 6701 3.488489 ACCTTTTTCGCATTCGATTTCG 58.512 40.909 0.00 0.00 45.04 3.46
6506 6714 2.528688 TCGATTTCGACTGTATTTCGCG 59.471 45.455 0.00 0.00 44.22 5.87
6507 6715 2.346376 CGATTTCGACTGTATTTCGCGG 60.346 50.000 6.13 0.00 43.02 6.46
6508 6716 0.717224 TTTCGACTGTATTTCGCGGC 59.283 50.000 6.13 0.00 36.40 6.53
6509 6717 0.108992 TTCGACTGTATTTCGCGGCT 60.109 50.000 6.13 0.00 36.40 5.52
6510 6718 0.524816 TCGACTGTATTTCGCGGCTC 60.525 55.000 6.13 0.00 36.40 4.70
6511 6719 1.798368 CGACTGTATTTCGCGGCTCG 61.798 60.000 6.13 0.00 40.15 5.03
6512 6720 1.480219 GACTGTATTTCGCGGCTCGG 61.480 60.000 6.13 0.66 39.05 4.63
6513 6721 1.226859 CTGTATTTCGCGGCTCGGA 60.227 57.895 6.13 0.00 39.05 4.55
6514 6722 1.209275 CTGTATTTCGCGGCTCGGAG 61.209 60.000 6.13 0.00 39.05 4.63
6515 6723 2.279252 TATTTCGCGGCTCGGAGC 60.279 61.111 21.57 21.57 41.46 4.70
6524 6732 4.235762 GCTCGGAGCGGGGCAATA 62.236 66.667 15.09 0.00 0.00 1.90
6525 6733 2.029666 CTCGGAGCGGGGCAATAG 59.970 66.667 0.00 0.00 0.00 1.73
6526 6734 3.521529 CTCGGAGCGGGGCAATAGG 62.522 68.421 0.00 0.00 0.00 2.57
6527 6735 4.626081 CGGAGCGGGGCAATAGGG 62.626 72.222 0.00 0.00 0.00 3.53
6528 6736 3.168528 GGAGCGGGGCAATAGGGA 61.169 66.667 0.00 0.00 0.00 4.20
6529 6737 2.111251 GAGCGGGGCAATAGGGAC 59.889 66.667 0.00 0.00 0.00 4.46
6530 6738 3.477578 GAGCGGGGCAATAGGGACC 62.478 68.421 0.00 0.00 34.06 4.46
6531 6739 3.489513 GCGGGGCAATAGGGACCT 61.490 66.667 0.00 0.00 35.71 3.85
6532 6740 3.056754 GCGGGGCAATAGGGACCTT 62.057 63.158 0.00 0.00 35.71 3.50
6533 6741 1.148498 CGGGGCAATAGGGACCTTC 59.852 63.158 0.00 0.00 35.71 3.46
6534 6742 1.148498 GGGGCAATAGGGACCTTCG 59.852 63.158 0.00 0.00 35.71 3.79
6535 6743 1.632965 GGGGCAATAGGGACCTTCGT 61.633 60.000 0.00 0.00 35.71 3.85
6536 6744 0.255033 GGGCAATAGGGACCTTCGTT 59.745 55.000 0.00 0.00 31.16 3.85
6537 6745 1.340697 GGGCAATAGGGACCTTCGTTT 60.341 52.381 0.00 0.00 31.16 3.60
6538 6746 2.443416 GGCAATAGGGACCTTCGTTTT 58.557 47.619 0.00 0.00 0.00 2.43
6539 6747 2.422479 GGCAATAGGGACCTTCGTTTTC 59.578 50.000 0.00 0.00 0.00 2.29
6540 6748 2.095372 GCAATAGGGACCTTCGTTTTCG 59.905 50.000 0.00 0.00 45.64 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.151471 TGAGTAAATCGGAAAAATCTTACTCTG 57.849 33.333 16.46 0.00 42.68 3.35
15 16 6.162079 ACAGATCTATGCATGAGTAAATCGG 58.838 40.000 10.16 6.45 0.00 4.18
16 17 8.239998 TCTACAGATCTATGCATGAGTAAATCG 58.760 37.037 10.16 3.33 0.00 3.34
33 34 5.186797 CCCCCTGTTGAGATATCTACAGATC 59.813 48.000 26.87 8.38 42.94 2.75
51 52 1.557099 GGAAAAAGTAAGGCCCCCTG 58.443 55.000 0.00 0.00 32.13 4.45
58 59 2.194201 TGGCTCGGGAAAAAGTAAGG 57.806 50.000 0.00 0.00 0.00 2.69
71 72 0.463295 ATGGCTTGTGAGATGGCTCG 60.463 55.000 0.00 0.00 44.33 5.03
84 85 4.410099 TCTTCTCATTGAAACCATGGCTT 58.590 39.130 13.04 5.67 33.79 4.35
103 104 9.599056 TCTGATGAATCTCTCCATATTACTCTT 57.401 33.333 0.00 0.00 0.00 2.85
105 106 9.023962 AGTCTGATGAATCTCTCCATATTACTC 57.976 37.037 0.00 0.00 0.00 2.59
110 111 5.418524 CCGAGTCTGATGAATCTCTCCATAT 59.581 44.000 0.00 0.00 35.39 1.78
111 112 4.764308 CCGAGTCTGATGAATCTCTCCATA 59.236 45.833 0.00 0.00 35.39 2.74
112 113 3.573538 CCGAGTCTGATGAATCTCTCCAT 59.426 47.826 0.00 0.00 35.39 3.41
121 122 4.223556 AGAGAGTACCGAGTCTGATGAA 57.776 45.455 0.00 0.00 35.36 2.57
130 131 3.181485 GGGATTCACAAGAGAGTACCGAG 60.181 52.174 0.00 0.00 0.00 4.63
133 134 2.159085 CCGGGATTCACAAGAGAGTACC 60.159 54.545 0.00 0.00 0.00 3.34
154 155 2.307686 TGAAGGTAAACCAGACCCCATC 59.692 50.000 1.26 0.00 37.73 3.51
173 174 0.624206 TCTCCCTGCATTCCCCATGA 60.624 55.000 0.00 0.00 34.31 3.07
193 194 3.621419 CAATGGGCTTGGAGGGAAT 57.379 52.632 0.00 0.00 0.00 3.01
213 214 2.143925 GAGCTCAAATGGGCGGTATAC 58.856 52.381 9.40 0.00 0.00 1.47
216 217 1.223487 GGAGCTCAAATGGGCGGTA 59.777 57.895 17.19 0.00 0.00 4.02
229 230 1.047002 CCTCATCGATTCCTGGAGCT 58.953 55.000 0.00 0.00 0.00 4.09
239 240 8.970859 AAAAGAAATAATGTCTCCTCATCGAT 57.029 30.769 0.00 0.00 0.00 3.59
270 271 6.374333 GCACCTTCTAACCATGATAAGAACAA 59.626 38.462 0.00 0.00 0.00 2.83
282 283 0.250727 GTGCAGGCACCTTCTAACCA 60.251 55.000 13.28 0.00 40.79 3.67
283 284 2.556286 GTGCAGGCACCTTCTAACC 58.444 57.895 13.28 0.00 40.79 2.85
323 324 6.505344 AGATAGACTAGATCCTGGTGAGAGAT 59.495 42.308 0.00 0.00 0.00 2.75
346 347 8.507524 TCACTTCTACGATTTCTTCTATGAGA 57.492 34.615 0.00 0.00 0.00 3.27
362 363 3.280295 TGTCCTCGGAGATCACTTCTAC 58.720 50.000 6.58 0.00 33.74 2.59
368 369 1.040339 AGGCTGTCCTCGGAGATCAC 61.040 60.000 6.58 0.89 38.72 3.06
388 389 3.505293 TGATGAGATCTCTGTGATAGCCG 59.495 47.826 22.95 0.00 35.14 5.52
389 390 5.221402 TGTTGATGAGATCTCTGTGATAGCC 60.221 44.000 22.95 3.89 35.14 3.93
400 401 4.498894 TGCAGGAATGTTGATGAGATCT 57.501 40.909 0.00 0.00 0.00 2.75
401 402 4.215827 GGATGCAGGAATGTTGATGAGATC 59.784 45.833 0.00 0.00 0.00 2.75
407 408 2.762327 GTTGGGATGCAGGAATGTTGAT 59.238 45.455 0.00 0.00 0.00 2.57
431 432 3.053896 CCGGCCTTTGTTCGGGTC 61.054 66.667 0.00 0.00 40.07 4.46
441 442 4.404098 CTTACACCGCCCGGCCTT 62.404 66.667 6.63 0.00 39.32 4.35
469 470 4.133820 GGTTGGGGTTCCTTTGAAAATTG 58.866 43.478 0.00 0.00 30.79 2.32
470 471 3.783082 TGGTTGGGGTTCCTTTGAAAATT 59.217 39.130 0.00 0.00 30.79 1.82
475 476 1.144913 CTCTGGTTGGGGTTCCTTTGA 59.855 52.381 0.00 0.00 0.00 2.69
478 479 1.068352 AGCTCTGGTTGGGGTTCCTT 61.068 55.000 0.00 0.00 0.00 3.36
496 497 8.386606 GTGAAAGAAATCTGACTTATGTAGCAG 58.613 37.037 0.00 0.00 32.59 4.24
539 540 5.102313 GCATGGGTTAAAGTTAGCAATGTC 58.898 41.667 0.00 0.00 0.00 3.06
542 543 4.093011 TGGCATGGGTTAAAGTTAGCAAT 58.907 39.130 0.00 0.00 0.00 3.56
565 566 2.225420 GGGGTTAAAGGGGTGATGGAAA 60.225 50.000 0.00 0.00 0.00 3.13
573 574 0.178944 GCAGTTGGGGTTAAAGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
575 576 1.203001 TCTGCAGTTGGGGTTAAAGGG 60.203 52.381 14.67 0.00 0.00 3.95
578 579 3.153919 GTCATCTGCAGTTGGGGTTAAA 58.846 45.455 21.65 1.12 0.00 1.52
581 582 0.251341 GGTCATCTGCAGTTGGGGTT 60.251 55.000 21.65 0.00 0.00 4.11
582 583 1.380302 GGTCATCTGCAGTTGGGGT 59.620 57.895 21.65 0.00 0.00 4.95
591 592 2.202743 TACGCGCTGGTCATCTGC 60.203 61.111 5.73 0.00 37.03 4.26
592 593 2.233654 GCTACGCGCTGGTCATCTG 61.234 63.158 5.73 0.00 35.14 2.90
596 597 2.509111 CATGCTACGCGCTGGTCA 60.509 61.111 5.73 0.00 40.11 4.02
605 606 2.218603 GGGGTTGTTATCCATGCTACG 58.781 52.381 0.00 0.00 0.00 3.51
643 645 3.128589 CACGGATTTGTTATGTTGGGAGG 59.871 47.826 0.00 0.00 0.00 4.30
648 650 5.323900 CAGTAGCACGGATTTGTTATGTTG 58.676 41.667 0.00 0.00 0.00 3.33
658 660 1.276421 ACTCAAGCAGTAGCACGGATT 59.724 47.619 0.00 0.00 45.49 3.01
662 664 1.657594 CATCACTCAAGCAGTAGCACG 59.342 52.381 0.00 0.00 45.49 5.34
667 669 4.937620 GGTCATTTCATCACTCAAGCAGTA 59.062 41.667 0.00 0.00 32.21 2.74
673 675 3.308402 GGGAGGGTCATTTCATCACTCAA 60.308 47.826 0.00 0.00 0.00 3.02
674 676 2.239654 GGGAGGGTCATTTCATCACTCA 59.760 50.000 0.00 0.00 0.00 3.41
675 677 2.239654 TGGGAGGGTCATTTCATCACTC 59.760 50.000 0.00 0.00 0.00 3.51
676 678 2.278245 TGGGAGGGTCATTTCATCACT 58.722 47.619 0.00 0.00 0.00 3.41
677 679 2.806945 TGGGAGGGTCATTTCATCAC 57.193 50.000 0.00 0.00 0.00 3.06
678 680 3.634504 CAATGGGAGGGTCATTTCATCA 58.365 45.455 0.00 0.00 33.08 3.07
679 681 2.363359 GCAATGGGAGGGTCATTTCATC 59.637 50.000 0.00 0.00 33.08 2.92
680 682 2.292389 TGCAATGGGAGGGTCATTTCAT 60.292 45.455 0.00 0.00 33.08 2.57
681 683 1.076841 TGCAATGGGAGGGTCATTTCA 59.923 47.619 0.00 0.00 33.08 2.69
682 684 1.851304 TGCAATGGGAGGGTCATTTC 58.149 50.000 0.00 0.00 33.08 2.17
683 685 2.112998 CATGCAATGGGAGGGTCATTT 58.887 47.619 0.00 0.00 41.79 2.32
684 686 1.784358 CATGCAATGGGAGGGTCATT 58.216 50.000 0.00 0.00 41.79 2.57
685 687 0.757935 GCATGCAATGGGAGGGTCAT 60.758 55.000 14.21 0.00 46.86 3.06
686 688 1.380246 GCATGCAATGGGAGGGTCA 60.380 57.895 14.21 0.00 46.86 4.02
687 689 0.757935 ATGCATGCAATGGGAGGGTC 60.758 55.000 26.68 0.00 46.86 4.46
688 690 0.557238 TATGCATGCAATGGGAGGGT 59.443 50.000 26.68 7.21 46.86 4.34
689 691 1.254026 CTATGCATGCAATGGGAGGG 58.746 55.000 26.68 4.97 46.86 4.30
690 692 1.254026 CCTATGCATGCAATGGGAGG 58.746 55.000 26.68 20.35 46.86 4.30
691 693 1.991121 ACCTATGCATGCAATGGGAG 58.009 50.000 31.99 21.12 46.86 4.30
692 694 2.033372 CAACCTATGCATGCAATGGGA 58.967 47.619 31.99 15.02 46.86 4.37
693 695 2.519377 CAACCTATGCATGCAATGGG 57.481 50.000 31.99 28.70 46.86 4.00
704 706 9.903682 CTCATTTATTAATTGGAGCAACCTATG 57.096 33.333 0.00 0.00 39.86 2.23
705 707 8.579863 GCTCATTTATTAATTGGAGCAACCTAT 58.420 33.333 17.89 0.00 39.86 2.57
706 708 7.014230 GGCTCATTTATTAATTGGAGCAACCTA 59.986 37.037 21.39 0.00 39.86 3.08
707 709 6.183360 GGCTCATTTATTAATTGGAGCAACCT 60.183 38.462 21.39 0.00 39.86 3.50
708 710 5.985530 GGCTCATTTATTAATTGGAGCAACC 59.014 40.000 21.39 9.20 36.29 3.77
709 711 6.809869 AGGCTCATTTATTAATTGGAGCAAC 58.190 36.000 21.39 11.79 36.29 4.17
710 712 8.532186 TTAGGCTCATTTATTAATTGGAGCAA 57.468 30.769 21.39 11.95 36.29 3.91
711 713 8.710749 ATTAGGCTCATTTATTAATTGGAGCA 57.289 30.769 21.39 9.84 36.29 4.26
726 728 9.745018 AGTTGTATGCATATTAATTAGGCTCAT 57.255 29.630 10.16 0.00 38.42 2.90
741 743 8.861086 AGCAGTAGTAGTATTAGTTGTATGCAT 58.139 33.333 3.79 3.79 0.00 3.96
742 744 8.234136 AGCAGTAGTAGTATTAGTTGTATGCA 57.766 34.615 0.00 0.00 0.00 3.96
743 745 9.182933 GAAGCAGTAGTAGTATTAGTTGTATGC 57.817 37.037 0.00 0.00 0.00 3.14
744 746 9.383462 CGAAGCAGTAGTAGTATTAGTTGTATG 57.617 37.037 0.00 0.00 0.00 2.39
745 747 8.566260 CCGAAGCAGTAGTAGTATTAGTTGTAT 58.434 37.037 0.00 0.00 0.00 2.29
746 748 7.467811 GCCGAAGCAGTAGTAGTATTAGTTGTA 60.468 40.741 0.00 0.00 39.53 2.41
747 749 6.679884 GCCGAAGCAGTAGTAGTATTAGTTGT 60.680 42.308 0.00 0.00 39.53 3.32
748 750 5.686397 GCCGAAGCAGTAGTAGTATTAGTTG 59.314 44.000 0.00 0.00 39.53 3.16
749 751 5.359009 TGCCGAAGCAGTAGTAGTATTAGTT 59.641 40.000 0.00 0.00 46.52 2.24
750 752 4.885907 TGCCGAAGCAGTAGTAGTATTAGT 59.114 41.667 0.00 0.00 46.52 2.24
751 753 5.434352 TGCCGAAGCAGTAGTAGTATTAG 57.566 43.478 0.00 0.00 46.52 1.73
765 767 6.910972 GTCCTAAAATAATAAAGTGCCGAAGC 59.089 38.462 0.00 0.00 40.48 3.86
766 768 8.209917 AGTCCTAAAATAATAAAGTGCCGAAG 57.790 34.615 0.00 0.00 0.00 3.79
767 769 9.841295 ATAGTCCTAAAATAATAAAGTGCCGAA 57.159 29.630 0.00 0.00 0.00 4.30
768 770 9.485206 GATAGTCCTAAAATAATAAAGTGCCGA 57.515 33.333 0.00 0.00 0.00 5.54
769 771 9.490379 AGATAGTCCTAAAATAATAAAGTGCCG 57.510 33.333 0.00 0.00 0.00 5.69
782 784 9.856162 AGTAACAAAAACCAGATAGTCCTAAAA 57.144 29.630 0.00 0.00 0.00 1.52
785 787 9.537852 TCTAGTAACAAAAACCAGATAGTCCTA 57.462 33.333 0.00 0.00 0.00 2.94
786 788 8.431910 TCTAGTAACAAAAACCAGATAGTCCT 57.568 34.615 0.00 0.00 0.00 3.85
787 789 9.099454 CATCTAGTAACAAAAACCAGATAGTCC 57.901 37.037 0.00 0.00 0.00 3.85
788 790 9.654663 ACATCTAGTAACAAAAACCAGATAGTC 57.345 33.333 0.00 0.00 0.00 2.59
789 791 9.654663 GACATCTAGTAACAAAAACCAGATAGT 57.345 33.333 0.00 0.00 0.00 2.12
790 792 9.877178 AGACATCTAGTAACAAAAACCAGATAG 57.123 33.333 0.00 0.00 0.00 2.08
791 793 9.653287 CAGACATCTAGTAACAAAAACCAGATA 57.347 33.333 0.00 0.00 0.00 1.98
792 794 7.119846 GCAGACATCTAGTAACAAAAACCAGAT 59.880 37.037 0.00 0.00 0.00 2.90
793 795 6.426937 GCAGACATCTAGTAACAAAAACCAGA 59.573 38.462 0.00 0.00 0.00 3.86
794 796 6.348540 GGCAGACATCTAGTAACAAAAACCAG 60.349 42.308 0.00 0.00 0.00 4.00
795 797 5.472137 GGCAGACATCTAGTAACAAAAACCA 59.528 40.000 0.00 0.00 0.00 3.67
796 798 5.705905 AGGCAGACATCTAGTAACAAAAACC 59.294 40.000 0.00 0.00 0.00 3.27
797 799 6.426937 TCAGGCAGACATCTAGTAACAAAAAC 59.573 38.462 0.00 0.00 0.00 2.43
798 800 6.530120 TCAGGCAGACATCTAGTAACAAAAA 58.470 36.000 0.00 0.00 0.00 1.94
799 801 6.109156 TCAGGCAGACATCTAGTAACAAAA 57.891 37.500 0.00 0.00 0.00 2.44
800 802 5.738619 TCAGGCAGACATCTAGTAACAAA 57.261 39.130 0.00 0.00 0.00 2.83
801 803 5.664457 CATCAGGCAGACATCTAGTAACAA 58.336 41.667 0.00 0.00 0.00 2.83
802 804 4.442052 GCATCAGGCAGACATCTAGTAACA 60.442 45.833 0.00 0.00 43.97 2.41
803 805 4.054671 GCATCAGGCAGACATCTAGTAAC 58.945 47.826 0.00 0.00 43.97 2.50
804 806 4.327982 GCATCAGGCAGACATCTAGTAA 57.672 45.455 0.00 0.00 43.97 2.24
806 808 2.906691 GCATCAGGCAGACATCTAGT 57.093 50.000 0.00 0.00 43.97 2.57
817 819 2.887568 CGTCTCGGTGCATCAGGC 60.888 66.667 0.00 0.00 45.13 4.85
818 820 2.202797 CCGTCTCGGTGCATCAGG 60.203 66.667 0.00 0.00 42.73 3.86
828 830 1.440708 ACAGTACTCACTCCGTCTCG 58.559 55.000 0.00 0.00 30.46 4.04
829 831 5.564048 ATTTACAGTACTCACTCCGTCTC 57.436 43.478 0.00 0.00 30.46 3.36
830 832 7.458409 TTTATTTACAGTACTCACTCCGTCT 57.542 36.000 0.00 0.00 30.46 4.18
831 833 7.201299 CGTTTTATTTACAGTACTCACTCCGTC 60.201 40.741 0.00 0.00 30.46 4.79
832 834 6.583806 CGTTTTATTTACAGTACTCACTCCGT 59.416 38.462 0.00 0.00 30.46 4.69
833 835 6.803320 TCGTTTTATTTACAGTACTCACTCCG 59.197 38.462 0.00 0.00 30.46 4.63
834 836 7.201299 CGTCGTTTTATTTACAGTACTCACTCC 60.201 40.741 0.00 0.00 30.46 3.85
835 837 7.651998 CGTCGTTTTATTTACAGTACTCACTC 58.348 38.462 0.00 0.00 30.46 3.51
836 838 6.088616 GCGTCGTTTTATTTACAGTACTCACT 59.911 38.462 0.00 0.00 34.42 3.41
837 839 6.129115 TGCGTCGTTTTATTTACAGTACTCAC 60.129 38.462 0.00 0.00 0.00 3.51
838 840 5.919707 TGCGTCGTTTTATTTACAGTACTCA 59.080 36.000 0.00 0.00 0.00 3.41
843 845 5.341196 GCAAATGCGTCGTTTTATTTACAGT 59.659 36.000 0.00 0.00 0.00 3.55
1141 1143 4.878774 GGATCTCGCAGCCGATAG 57.121 61.111 0.00 0.00 43.47 2.08
1520 1522 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1521 1523 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1522 1524 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1523 1525 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1524 1526 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
1525 1527 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
1526 1528 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
1527 1529 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
1528 1530 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
1529 1531 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
1562 1564 9.408648 CCAAAATAGATGACCCAACTTTATACT 57.591 33.333 0.00 0.00 0.00 2.12
1563 1565 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
1564 1566 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
1565 1567 8.749354 GTTCCAAAATAGATGACCCAACTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
1566 1568 7.094549 CGTTCCAAAATAGATGACCCAACTTTA 60.095 37.037 0.00 0.00 0.00 1.85
1567 1569 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1568 1570 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1569 1571 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1570 1572 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1571 1573 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1572 1574 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1573 1575 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1574 1576 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1575 1577 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1576 1578 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1577 1579 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1578 1580 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1579 1581 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1580 1582 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1581 1583 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
1582 1584 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
1583 1585 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
1584 1586 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1585 1587 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
1586 1588 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
1587 1589 1.204231 GACAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
1588 1590 2.169330 AGACAAGTACTCCCTCCGTTC 58.831 52.381 0.00 0.00 0.00 3.95
1589 1591 2.305858 AGACAAGTACTCCCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
1590 1592 2.308275 ACTAGACAAGTACTCCCTCCGT 59.692 50.000 0.00 0.00 36.36 4.69
1591 1593 3.002038 ACTAGACAAGTACTCCCTCCG 57.998 52.381 0.00 0.00 36.36 4.63
1592 1594 4.278919 GCATACTAGACAAGTACTCCCTCC 59.721 50.000 0.00 0.00 43.47 4.30
1593 1595 5.134661 AGCATACTAGACAAGTACTCCCTC 58.865 45.833 0.00 0.00 43.47 4.30
1594 1596 5.132043 AGCATACTAGACAAGTACTCCCT 57.868 43.478 0.00 0.00 43.47 4.20
1595 1597 4.888239 TGAGCATACTAGACAAGTACTCCC 59.112 45.833 0.00 0.00 43.47 4.30
1596 1598 6.095720 ACTTGAGCATACTAGACAAGTACTCC 59.904 42.308 0.00 0.00 45.64 3.85
1597 1599 7.090953 ACTTGAGCATACTAGACAAGTACTC 57.909 40.000 0.00 0.00 45.64 2.59
1598 1600 7.469537 AACTTGAGCATACTAGACAAGTACT 57.530 36.000 0.00 0.00 46.37 2.73
1599 1601 8.535690 AAAACTTGAGCATACTAGACAAGTAC 57.464 34.615 0.00 0.00 46.37 2.73
1600 1602 8.988934 CAAAAACTTGAGCATACTAGACAAGTA 58.011 33.333 0.00 0.00 46.37 2.24
1602 1604 7.865707 ACAAAAACTTGAGCATACTAGACAAG 58.134 34.615 0.00 0.00 42.11 3.16
1603 1605 7.801716 ACAAAAACTTGAGCATACTAGACAA 57.198 32.000 0.00 0.00 0.00 3.18
1652 1654 7.355101 ACTAAGGAGTAGTCACTTATCCATCA 58.645 38.462 9.95 0.00 38.84 3.07
1654 1656 8.504409 AGTACTAAGGAGTAGTCACTTATCCAT 58.496 37.037 9.95 1.81 42.37 3.41
1655 1657 7.774157 CAGTACTAAGGAGTAGTCACTTATCCA 59.226 40.741 9.95 0.00 42.37 3.41
1659 1661 7.025520 ACCAGTACTAAGGAGTAGTCACTTA 57.974 40.000 6.26 4.53 42.37 2.24
1681 1683 5.353394 TCCAGTTTGTCCACATAGATACC 57.647 43.478 0.00 0.00 0.00 2.73
1710 1712 5.981915 AGCGACGTTCCTTTTAATAGATACC 59.018 40.000 0.00 0.00 0.00 2.73
1716 1725 7.436080 CACCTAATAGCGACGTTCCTTTTAATA 59.564 37.037 0.00 0.00 0.00 0.98
1722 1731 2.756760 TCACCTAATAGCGACGTTCCTT 59.243 45.455 0.00 0.00 0.00 3.36
1767 1776 8.045176 ACCAAGTGAATCTTTATTTCTAGCAC 57.955 34.615 0.00 0.00 33.63 4.40
1793 1802 3.898482 GGTTGGCACCTGGTATTATCTT 58.102 45.455 0.00 0.00 40.44 2.40
1884 1893 7.205515 TCCCCAAAATGCCAATAAACATAAT 57.794 32.000 0.00 0.00 0.00 1.28
1897 1906 8.366359 ACCATCTATTATATTCCCCAAAATGC 57.634 34.615 0.00 0.00 0.00 3.56
1904 1913 6.313519 TGCAGACCATCTATTATATTCCCC 57.686 41.667 0.00 0.00 0.00 4.81
2297 2313 3.088194 TCACAGTTGAACGGACTACAC 57.912 47.619 1.76 0.00 0.00 2.90
2408 2424 5.982890 AAAACTGTAATCCCTTCCATGTG 57.017 39.130 0.00 0.00 0.00 3.21
2436 2452 1.485066 ACTACCCATGGTTTCTAGCCG 59.515 52.381 11.73 0.00 37.09 5.52
2438 2454 4.748277 TGTACTACCCATGGTTTCTAGC 57.252 45.455 11.73 0.00 37.09 3.42
2441 2457 6.062095 GCATAATGTACTACCCATGGTTTCT 58.938 40.000 11.73 0.00 37.09 2.52
2443 2459 5.761205 TGCATAATGTACTACCCATGGTTT 58.239 37.500 11.73 0.00 37.09 3.27
2487 2503 2.160417 CGGAACAAATCTTCAGTGGCTC 59.840 50.000 0.00 0.00 0.00 4.70
2494 2510 5.237561 TCGAAATTCACGGAACAAATCTTCA 59.762 36.000 0.00 0.00 0.00 3.02
2508 2524 4.223320 TGTTCCTTGCTTCGAAATTCAC 57.777 40.909 0.00 0.00 0.00 3.18
2517 2533 6.488006 ACCACATATATCATGTTCCTTGCTTC 59.512 38.462 0.00 0.00 0.00 3.86
2518 2534 6.367983 ACCACATATATCATGTTCCTTGCTT 58.632 36.000 0.00 0.00 0.00 3.91
2710 2726 4.496360 TCGGCGTAGAATGAATTGTGTTA 58.504 39.130 6.85 0.00 0.00 2.41
2711 2727 3.331150 TCGGCGTAGAATGAATTGTGTT 58.669 40.909 6.85 0.00 0.00 3.32
2721 2737 3.527533 TGCAAATTACTCGGCGTAGAAT 58.472 40.909 6.85 1.85 0.00 2.40
2735 2751 3.123050 GTGAAAGCGGTTTCTGCAAATT 58.877 40.909 32.74 1.88 42.39 1.82
2748 2764 1.132640 GCAGTTAGCCGTGAAAGCG 59.867 57.895 0.00 0.00 37.23 4.68
2768 2784 5.750067 ACATCACAAAGAAAGACAACAATGC 59.250 36.000 0.00 0.00 0.00 3.56
2772 2788 7.985184 AGTACTACATCACAAAGAAAGACAACA 59.015 33.333 0.00 0.00 0.00 3.33
2808 2828 0.031716 TGGGGTCTGCTAGAGATGCT 60.032 55.000 0.00 0.00 31.63 3.79
2809 2829 0.105778 GTGGGGTCTGCTAGAGATGC 59.894 60.000 0.00 0.00 31.63 3.91
2810 2830 1.489481 TGTGGGGTCTGCTAGAGATG 58.511 55.000 0.00 0.00 31.63 2.90
2811 2831 2.254152 TTGTGGGGTCTGCTAGAGAT 57.746 50.000 0.00 0.00 31.63 2.75
2812 2832 2.024176 TTTGTGGGGTCTGCTAGAGA 57.976 50.000 0.00 0.00 0.00 3.10
2814 2834 1.270625 CGTTTTGTGGGGTCTGCTAGA 60.271 52.381 0.00 0.00 0.00 2.43
2815 2835 1.156736 CGTTTTGTGGGGTCTGCTAG 58.843 55.000 0.00 0.00 0.00 3.42
2816 2836 0.887387 GCGTTTTGTGGGGTCTGCTA 60.887 55.000 0.00 0.00 0.00 3.49
2817 2837 2.193536 GCGTTTTGTGGGGTCTGCT 61.194 57.895 0.00 0.00 0.00 4.24
2818 2838 2.335011 GCGTTTTGTGGGGTCTGC 59.665 61.111 0.00 0.00 0.00 4.26
2819 2839 1.720694 AACGCGTTTTGTGGGGTCTG 61.721 55.000 20.79 0.00 0.00 3.51
2820 2840 1.033202 AAACGCGTTTTGTGGGGTCT 61.033 50.000 30.36 5.48 0.00 3.85
2821 2841 0.868177 CAAACGCGTTTTGTGGGGTC 60.868 55.000 33.05 0.00 39.96 4.46
2822 2842 1.139947 CAAACGCGTTTTGTGGGGT 59.860 52.632 33.05 8.71 39.96 4.95
2823 2843 2.234335 GCAAACGCGTTTTGTGGGG 61.234 57.895 33.05 21.44 45.70 4.96
2827 2847 1.264672 GAACTGCAAACGCGTTTTGT 58.735 45.000 33.05 26.17 45.70 2.83
2950 2972 3.909086 GAGCAGACCCCGCAAAGCT 62.909 63.158 0.00 0.00 34.61 3.74
3016 3039 6.909895 GGATGTTTGTTTTATTTTTGTGGTGC 59.090 34.615 0.00 0.00 0.00 5.01
3130 3157 8.365399 AGTTCGCTTCGATGATTTGAATAATA 57.635 30.769 1.89 0.00 35.23 0.98
3144 3171 5.788055 TTGCATTATTTAGTTCGCTTCGA 57.212 34.783 0.00 0.00 0.00 3.71
3248 3286 4.543590 TTCAACTTCAGGAGGATCTCAC 57.456 45.455 0.00 0.00 33.73 3.51
3679 3725 1.279496 AGTGGTGATGCTCCTGCTTA 58.721 50.000 0.00 0.00 40.48 3.09
3731 3777 5.048921 GGCACTCTCAATGATATCAATGTGG 60.049 44.000 18.14 12.98 0.00 4.17
3818 3865 1.136141 GCAAGTCTCGTGATGCAACAG 60.136 52.381 0.00 0.00 38.63 3.16
4416 4469 3.353836 GCGACCTTTCGGCAGCAA 61.354 61.111 0.00 0.00 45.98 3.91
4707 4807 3.016971 CCCCATCCTCCAGCACCA 61.017 66.667 0.00 0.00 0.00 4.17
4804 4906 1.204786 TTTCCCCATCTCCTTCGCCA 61.205 55.000 0.00 0.00 0.00 5.69
5084 5195 4.686091 GCAGGTTTTCTCACCAAATTTAGC 59.314 41.667 0.00 0.00 39.62 3.09
5141 5252 4.323028 CCTCTCAAGAATCCACAGCAGTTA 60.323 45.833 0.00 0.00 0.00 2.24
5171 5282 3.190535 GCGTTTCATGACCTAACAACCAT 59.809 43.478 8.95 0.00 0.00 3.55
5311 5422 9.801873 TTCTGCAAAATAATTTCTTACATAGGC 57.198 29.630 0.00 0.00 0.00 3.93
5674 5785 7.231467 ACCACTGAGAAACTATAAAATGTGGT 58.769 34.615 0.00 0.00 46.23 4.16
5791 5902 4.454847 GTCTAAGGACCAAAACAGGTTAGC 59.545 45.833 0.00 0.00 43.38 3.09
6196 6404 2.653448 CGAGACAGCGATCCAGCG 60.653 66.667 0.00 0.00 43.00 5.18
6197 6405 1.299014 CTCGAGACAGCGATCCAGC 60.299 63.158 6.58 0.00 39.85 4.85
6198 6406 1.299014 GCTCGAGACAGCGATCCAG 60.299 63.158 18.75 0.00 39.85 3.86
6199 6407 2.801421 GCTCGAGACAGCGATCCA 59.199 61.111 18.75 0.00 39.85 3.41
6220 6428 3.456431 AATCGACGGCTCTCTCGCG 62.456 63.158 0.00 0.00 0.00 5.87
6221 6429 1.941734 CAATCGACGGCTCTCTCGC 60.942 63.158 0.00 0.00 0.00 5.03
6222 6430 0.179161 AACAATCGACGGCTCTCTCG 60.179 55.000 0.00 0.00 0.00 4.04
6223 6431 1.272781 CAACAATCGACGGCTCTCTC 58.727 55.000 0.00 0.00 0.00 3.20
6224 6432 0.737715 GCAACAATCGACGGCTCTCT 60.738 55.000 0.00 0.00 0.00 3.10
6225 6433 1.710339 GCAACAATCGACGGCTCTC 59.290 57.895 0.00 0.00 0.00 3.20
6226 6434 2.094659 CGCAACAATCGACGGCTCT 61.095 57.895 0.00 0.00 0.00 4.09
6227 6435 1.421410 ATCGCAACAATCGACGGCTC 61.421 55.000 0.00 0.00 38.88 4.70
6228 6436 1.447838 ATCGCAACAATCGACGGCT 60.448 52.632 0.00 0.00 38.88 5.52
6229 6437 1.296867 CATCGCAACAATCGACGGC 60.297 57.895 0.00 0.00 38.88 5.68
6230 6438 1.081556 TCCATCGCAACAATCGACGG 61.082 55.000 0.00 0.00 40.25 4.79
6231 6439 0.930310 ATCCATCGCAACAATCGACG 59.070 50.000 0.00 0.00 38.88 5.12
6232 6440 1.071239 CGATCCATCGCAACAATCGAC 60.071 52.381 0.00 0.00 43.84 4.20
6233 6441 1.208259 CGATCCATCGCAACAATCGA 58.792 50.000 0.00 0.00 43.84 3.59
6234 6442 3.715839 CGATCCATCGCAACAATCG 57.284 52.632 0.00 0.00 43.84 3.34
6244 6452 1.958205 CCTGGCGCTTCGATCCATC 60.958 63.158 7.64 0.00 0.00 3.51
6245 6453 1.971505 TTCCTGGCGCTTCGATCCAT 61.972 55.000 7.64 0.00 0.00 3.41
6246 6454 2.578163 CTTCCTGGCGCTTCGATCCA 62.578 60.000 7.64 0.00 0.00 3.41
6247 6455 1.884926 CTTCCTGGCGCTTCGATCC 60.885 63.158 7.64 0.00 0.00 3.36
6248 6456 1.141881 TCTTCCTGGCGCTTCGATC 59.858 57.895 7.64 0.00 0.00 3.69
6249 6457 1.153549 GTCTTCCTGGCGCTTCGAT 60.154 57.895 7.64 0.00 0.00 3.59
6250 6458 1.888436 ATGTCTTCCTGGCGCTTCGA 61.888 55.000 7.64 0.00 0.00 3.71
6251 6459 1.424493 GATGTCTTCCTGGCGCTTCG 61.424 60.000 7.64 0.00 0.00 3.79
6252 6460 1.092345 GGATGTCTTCCTGGCGCTTC 61.092 60.000 7.64 0.00 41.78 3.86
6253 6461 1.078143 GGATGTCTTCCTGGCGCTT 60.078 57.895 7.64 0.00 41.78 4.68
6254 6462 2.586792 GGATGTCTTCCTGGCGCT 59.413 61.111 7.64 0.00 41.78 5.92
6255 6463 2.892425 CGGATGTCTTCCTGGCGC 60.892 66.667 0.00 0.00 42.99 6.53
6256 6464 1.519455 GTCGGATGTCTTCCTGGCG 60.519 63.158 3.45 0.00 42.99 5.69
6257 6465 0.460987 CTGTCGGATGTCTTCCTGGC 60.461 60.000 3.45 0.08 42.99 4.85
6258 6466 0.460987 GCTGTCGGATGTCTTCCTGG 60.461 60.000 3.45 0.00 42.99 4.45
6259 6467 0.803768 CGCTGTCGGATGTCTTCCTG 60.804 60.000 3.45 0.00 42.99 3.86
6260 6468 1.513158 CGCTGTCGGATGTCTTCCT 59.487 57.895 3.45 0.00 42.99 3.36
6261 6469 4.094684 CGCTGTCGGATGTCTTCC 57.905 61.111 0.00 0.00 41.59 3.46
6271 6479 2.637025 CCACCAAAACCGCTGTCG 59.363 61.111 0.00 0.00 0.00 4.35
6272 6480 2.561037 CCCCACCAAAACCGCTGTC 61.561 63.158 0.00 0.00 0.00 3.51
6273 6481 2.520741 CCCCACCAAAACCGCTGT 60.521 61.111 0.00 0.00 0.00 4.40
6274 6482 3.989787 GCCCCACCAAAACCGCTG 61.990 66.667 0.00 0.00 0.00 5.18
6277 6485 3.302344 CAGGCCCCACCAAAACCG 61.302 66.667 0.00 0.00 43.14 4.44
6278 6486 2.123033 ACAGGCCCCACCAAAACC 60.123 61.111 0.00 0.00 43.14 3.27
6279 6487 1.045911 TTCACAGGCCCCACCAAAAC 61.046 55.000 0.00 0.00 43.14 2.43
6280 6488 1.045911 GTTCACAGGCCCCACCAAAA 61.046 55.000 0.00 0.00 43.14 2.44
6281 6489 1.456705 GTTCACAGGCCCCACCAAA 60.457 57.895 0.00 0.00 43.14 3.28
6282 6490 2.197324 GTTCACAGGCCCCACCAA 59.803 61.111 0.00 0.00 43.14 3.67
6283 6491 3.099841 TGTTCACAGGCCCCACCA 61.100 61.111 0.00 0.00 43.14 4.17
6284 6492 2.282462 CTGTTCACAGGCCCCACC 60.282 66.667 0.00 0.00 40.20 4.61
6291 6499 7.508848 TTCCCCTGGAATTACTGTTCACAGG 62.509 48.000 11.62 0.00 41.38 4.00
6292 6500 4.506625 TTCCCCTGGAATTACTGTTCACAG 60.507 45.833 5.36 5.36 42.10 3.66
6293 6501 2.983192 TCCCCTGGAATTACTGTTCACA 59.017 45.455 0.00 0.00 0.00 3.58
6294 6502 3.713826 TCCCCTGGAATTACTGTTCAC 57.286 47.619 0.00 0.00 0.00 3.18
6295 6503 4.733077 TTTCCCCTGGAATTACTGTTCA 57.267 40.909 0.00 0.00 41.71 3.18
6296 6504 5.714806 TGATTTTCCCCTGGAATTACTGTTC 59.285 40.000 0.00 0.00 41.71 3.18
6297 6505 5.480422 GTGATTTTCCCCTGGAATTACTGTT 59.520 40.000 0.00 0.00 41.71 3.16
6298 6506 5.016831 GTGATTTTCCCCTGGAATTACTGT 58.983 41.667 0.00 0.00 41.71 3.55
6299 6507 4.402474 GGTGATTTTCCCCTGGAATTACTG 59.598 45.833 0.00 0.00 41.71 2.74
6300 6508 4.572007 GGGTGATTTTCCCCTGGAATTACT 60.572 45.833 0.00 0.00 41.71 2.24
6301 6509 3.704566 GGGTGATTTTCCCCTGGAATTAC 59.295 47.826 0.00 0.00 41.71 1.89
6302 6510 3.989056 GGGTGATTTTCCCCTGGAATTA 58.011 45.455 0.00 0.00 41.71 1.40
6303 6511 2.832838 GGGTGATTTTCCCCTGGAATT 58.167 47.619 0.00 0.00 41.71 2.17
6304 6512 2.550277 GGGTGATTTTCCCCTGGAAT 57.450 50.000 0.00 0.00 41.71 3.01
6311 6519 2.348104 GGTGCGGGGTGATTTTCCC 61.348 63.158 0.00 0.00 43.90 3.97
6312 6520 1.605165 TGGTGCGGGGTGATTTTCC 60.605 57.895 0.00 0.00 0.00 3.13
6313 6521 1.584495 GTGGTGCGGGGTGATTTTC 59.416 57.895 0.00 0.00 0.00 2.29
6314 6522 1.906333 GGTGGTGCGGGGTGATTTT 60.906 57.895 0.00 0.00 0.00 1.82
6315 6523 2.282887 GGTGGTGCGGGGTGATTT 60.283 61.111 0.00 0.00 0.00 2.17
6316 6524 4.715523 CGGTGGTGCGGGGTGATT 62.716 66.667 0.00 0.00 0.00 2.57
6326 6534 4.410400 GGAAGGGGAGCGGTGGTG 62.410 72.222 0.00 0.00 0.00 4.17
6327 6535 4.658786 AGGAAGGGGAGCGGTGGT 62.659 66.667 0.00 0.00 0.00 4.16
6328 6536 3.787001 GAGGAAGGGGAGCGGTGG 61.787 72.222 0.00 0.00 0.00 4.61
6329 6537 3.787001 GGAGGAAGGGGAGCGGTG 61.787 72.222 0.00 0.00 0.00 4.94
6330 6538 3.986116 GAGGAGGAAGGGGAGCGGT 62.986 68.421 0.00 0.00 0.00 5.68
6331 6539 3.157949 GAGGAGGAAGGGGAGCGG 61.158 72.222 0.00 0.00 0.00 5.52
6332 6540 3.157949 GGAGGAGGAAGGGGAGCG 61.158 72.222 0.00 0.00 0.00 5.03
6333 6541 1.962570 TAGGGAGGAGGAAGGGGAGC 61.963 65.000 0.00 0.00 0.00 4.70
6334 6542 0.871024 ATAGGGAGGAGGAAGGGGAG 59.129 60.000 0.00 0.00 0.00 4.30
6335 6543 1.223337 GAATAGGGAGGAGGAAGGGGA 59.777 57.143 0.00 0.00 0.00 4.81
6336 6544 1.224381 AGAATAGGGAGGAGGAAGGGG 59.776 57.143 0.00 0.00 0.00 4.79
6337 6545 2.334023 CAGAATAGGGAGGAGGAAGGG 58.666 57.143 0.00 0.00 0.00 3.95
6338 6546 3.053359 ACAGAATAGGGAGGAGGAAGG 57.947 52.381 0.00 0.00 0.00 3.46
6339 6547 4.775236 CAAACAGAATAGGGAGGAGGAAG 58.225 47.826 0.00 0.00 0.00 3.46
6340 6548 3.054361 GCAAACAGAATAGGGAGGAGGAA 60.054 47.826 0.00 0.00 0.00 3.36
6341 6549 2.505819 GCAAACAGAATAGGGAGGAGGA 59.494 50.000 0.00 0.00 0.00 3.71
6342 6550 2.239654 TGCAAACAGAATAGGGAGGAGG 59.760 50.000 0.00 0.00 0.00 4.30
6343 6551 3.634397 TGCAAACAGAATAGGGAGGAG 57.366 47.619 0.00 0.00 0.00 3.69
6355 6563 3.726517 CCCGTCGCCTGCAAACAG 61.727 66.667 0.00 0.00 44.05 3.16
6356 6564 4.243008 TCCCGTCGCCTGCAAACA 62.243 61.111 0.00 0.00 0.00 2.83
6357 6565 3.423154 CTCCCGTCGCCTGCAAAC 61.423 66.667 0.00 0.00 0.00 2.93
6358 6566 3.589654 CTCTCCCGTCGCCTGCAAA 62.590 63.158 0.00 0.00 0.00 3.68
6359 6567 4.069232 CTCTCCCGTCGCCTGCAA 62.069 66.667 0.00 0.00 0.00 4.08
6370 6578 3.662117 AAATTGCCCCGCCTCTCCC 62.662 63.158 0.00 0.00 0.00 4.30
6371 6579 2.043953 AAATTGCCCCGCCTCTCC 60.044 61.111 0.00 0.00 0.00 3.71
6372 6580 1.077429 AGAAATTGCCCCGCCTCTC 60.077 57.895 0.00 0.00 0.00 3.20
6373 6581 1.379044 CAGAAATTGCCCCGCCTCT 60.379 57.895 0.00 0.00 0.00 3.69
6374 6582 3.200522 CAGAAATTGCCCCGCCTC 58.799 61.111 0.00 0.00 0.00 4.70
6383 6591 1.538276 GTGAATCGGCGCAGAAATTG 58.462 50.000 15.65 0.00 0.00 2.32
6384 6592 0.451783 GGTGAATCGGCGCAGAAATT 59.548 50.000 15.65 5.07 0.00 1.82
6385 6593 1.705337 CGGTGAATCGGCGCAGAAAT 61.705 55.000 15.65 6.62 0.00 2.17
6386 6594 2.387445 CGGTGAATCGGCGCAGAAA 61.387 57.895 15.65 0.17 0.00 2.52
6387 6595 2.813474 CGGTGAATCGGCGCAGAA 60.813 61.111 15.65 0.00 0.00 3.02
6388 6596 3.982372 GACGGTGAATCGGCGCAGA 62.982 63.158 13.82 13.82 0.00 4.26
6389 6597 3.554692 GACGGTGAATCGGCGCAG 61.555 66.667 10.83 5.07 0.00 5.18
6390 6598 4.365505 TGACGGTGAATCGGCGCA 62.366 61.111 10.83 0.00 41.88 6.09
6391 6599 3.849953 GTGACGGTGAATCGGCGC 61.850 66.667 0.00 0.00 41.88 6.53
6392 6600 3.541831 CGTGACGGTGAATCGGCG 61.542 66.667 0.00 0.00 41.88 6.46
6393 6601 3.186047 CCGTGACGGTGAATCGGC 61.186 66.667 17.28 0.00 42.73 5.54
6394 6602 2.495366 TTCCCGTGACGGTGAATCGG 62.495 60.000 23.73 5.52 46.80 4.18
6395 6603 1.076533 CTTCCCGTGACGGTGAATCG 61.077 60.000 23.73 10.79 46.80 3.34
6396 6604 0.739813 CCTTCCCGTGACGGTGAATC 60.740 60.000 23.73 0.00 46.80 2.52
6397 6605 1.295423 CCTTCCCGTGACGGTGAAT 59.705 57.895 23.73 0.00 46.80 2.57
6398 6606 2.738480 CCTTCCCGTGACGGTGAA 59.262 61.111 23.73 22.04 46.80 3.18
6399 6607 3.998672 GCCTTCCCGTGACGGTGA 61.999 66.667 23.73 16.46 46.80 4.02
6403 6611 3.047877 GTTGGCCTTCCCGTGACG 61.048 66.667 3.32 0.00 35.87 4.35
6404 6612 2.671963 GGTTGGCCTTCCCGTGAC 60.672 66.667 3.32 0.00 35.87 3.67
6405 6613 2.534396 ATGGTTGGCCTTCCCGTGA 61.534 57.895 3.32 0.00 35.87 4.35
6406 6614 2.035626 ATGGTTGGCCTTCCCGTG 59.964 61.111 3.32 0.00 35.87 4.94
6407 6615 2.035626 CATGGTTGGCCTTCCCGT 59.964 61.111 3.32 0.00 35.87 5.28
6408 6616 2.755469 CCATGGTTGGCCTTCCCG 60.755 66.667 3.32 0.57 35.85 5.14
6409 6617 2.364186 CCCATGGTTGGCCTTCCC 60.364 66.667 11.73 1.03 42.15 3.97
6410 6618 3.076916 GCCCATGGTTGGCCTTCC 61.077 66.667 11.73 7.10 43.33 3.46
6411 6619 3.451894 CGCCCATGGTTGGCCTTC 61.452 66.667 11.73 0.00 46.48 3.46
6415 6623 4.211502 GATGCGCCCATGGTTGGC 62.212 66.667 11.73 11.26 45.70 4.52
6416 6624 2.440796 AGATGCGCCCATGGTTGG 60.441 61.111 11.73 0.00 43.23 3.77
6417 6625 2.827051 CGAGATGCGCCCATGGTTG 61.827 63.158 11.73 3.32 0.00 3.77
6418 6626 2.514592 CGAGATGCGCCCATGGTT 60.515 61.111 11.73 0.00 0.00 3.67
6447 6655 2.046604 GGTGCGGTGGTTACCTCC 60.047 66.667 12.16 12.16 45.22 4.30
6448 6656 2.433664 CGGTGCGGTGGTTACCTC 60.434 66.667 2.07 0.00 45.22 3.85
6449 6657 4.692475 GCGGTGCGGTGGTTACCT 62.692 66.667 2.07 0.00 45.22 3.08
6450 6658 4.992511 TGCGGTGCGGTGGTTACC 62.993 66.667 0.00 0.00 43.89 2.85
6451 6659 3.419759 CTGCGGTGCGGTGGTTAC 61.420 66.667 0.00 0.00 0.00 2.50
6452 6660 4.690719 CCTGCGGTGCGGTGGTTA 62.691 66.667 0.00 0.00 32.22 2.85
6459 6667 4.760047 AAGGTAGCCTGCGGTGCG 62.760 66.667 0.00 0.00 32.13 5.34
6460 6668 1.524008 AAAAAGGTAGCCTGCGGTGC 61.524 55.000 0.00 0.00 32.13 5.01
6461 6669 0.521735 GAAAAAGGTAGCCTGCGGTG 59.478 55.000 0.00 0.00 32.13 4.94
6462 6670 0.953960 CGAAAAAGGTAGCCTGCGGT 60.954 55.000 0.00 0.00 32.13 5.68
6463 6671 1.794222 CGAAAAAGGTAGCCTGCGG 59.206 57.895 0.00 0.00 32.13 5.69
6464 6672 1.134694 GCGAAAAAGGTAGCCTGCG 59.865 57.895 0.00 0.00 32.13 5.18
6465 6673 0.811281 ATGCGAAAAAGGTAGCCTGC 59.189 50.000 0.00 0.00 32.13 4.85
6466 6674 2.476185 CGAATGCGAAAAAGGTAGCCTG 60.476 50.000 0.00 0.00 40.82 4.85
6467 6675 1.737793 CGAATGCGAAAAAGGTAGCCT 59.262 47.619 0.00 0.00 40.82 4.58
6468 6676 1.735571 TCGAATGCGAAAAAGGTAGCC 59.264 47.619 0.00 0.00 44.78 3.93
6486 6694 2.346376 CCGCGAAATACAGTCGAAATCG 60.346 50.000 8.23 0.00 41.02 3.34
6487 6695 2.596807 GCCGCGAAATACAGTCGAAATC 60.597 50.000 8.23 0.00 41.02 2.17
6488 6696 1.326548 GCCGCGAAATACAGTCGAAAT 59.673 47.619 8.23 0.00 41.02 2.17
6489 6697 0.717224 GCCGCGAAATACAGTCGAAA 59.283 50.000 8.23 0.00 41.02 3.46
6490 6698 0.108992 AGCCGCGAAATACAGTCGAA 60.109 50.000 8.23 0.00 41.02 3.71
6491 6699 0.524816 GAGCCGCGAAATACAGTCGA 60.525 55.000 8.23 0.00 41.02 4.20
6492 6700 1.798368 CGAGCCGCGAAATACAGTCG 61.798 60.000 8.23 0.00 44.57 4.18
6493 6701 1.480219 CCGAGCCGCGAAATACAGTC 61.480 60.000 8.23 0.00 44.57 3.51
6494 6702 1.518572 CCGAGCCGCGAAATACAGT 60.519 57.895 8.23 0.00 44.57 3.55
6495 6703 1.209275 CTCCGAGCCGCGAAATACAG 61.209 60.000 8.23 0.00 44.57 2.74
6496 6704 1.226859 CTCCGAGCCGCGAAATACA 60.227 57.895 8.23 0.00 44.57 2.29
6497 6705 2.586773 GCTCCGAGCCGCGAAATAC 61.587 63.158 8.23 0.00 44.57 1.89
6498 6706 2.279252 GCTCCGAGCCGCGAAATA 60.279 61.111 8.23 0.00 44.57 1.40
6507 6715 4.235762 TATTGCCCCGCTCCGAGC 62.236 66.667 10.59 10.59 38.02 5.03
6508 6716 2.029666 CTATTGCCCCGCTCCGAG 59.970 66.667 0.00 0.00 0.00 4.63
6509 6717 3.546543 CCTATTGCCCCGCTCCGA 61.547 66.667 0.00 0.00 0.00 4.55
6510 6718 4.626081 CCCTATTGCCCCGCTCCG 62.626 72.222 0.00 0.00 0.00 4.63
6511 6719 3.168528 TCCCTATTGCCCCGCTCC 61.169 66.667 0.00 0.00 0.00 4.70
6512 6720 2.111251 GTCCCTATTGCCCCGCTC 59.889 66.667 0.00 0.00 0.00 5.03
6513 6721 3.489513 GGTCCCTATTGCCCCGCT 61.490 66.667 0.00 0.00 0.00 5.52
6514 6722 2.960359 GAAGGTCCCTATTGCCCCGC 62.960 65.000 0.00 0.00 0.00 6.13
6515 6723 1.148498 GAAGGTCCCTATTGCCCCG 59.852 63.158 0.00 0.00 0.00 5.73
6516 6724 1.148498 CGAAGGTCCCTATTGCCCC 59.852 63.158 0.00 0.00 0.00 5.80
6517 6725 0.255033 AACGAAGGTCCCTATTGCCC 59.745 55.000 0.00 0.00 0.00 5.36
6518 6726 2.124277 AAACGAAGGTCCCTATTGCC 57.876 50.000 0.00 0.00 0.00 4.52
6519 6727 2.095372 CGAAAACGAAGGTCCCTATTGC 59.905 50.000 0.00 0.00 0.00 3.56
6520 6728 3.370061 GTCGAAAACGAAGGTCCCTATTG 59.630 47.826 0.00 0.00 0.00 1.90
6521 6729 3.007182 TGTCGAAAACGAAGGTCCCTATT 59.993 43.478 0.00 0.00 0.00 1.73
6522 6730 2.564062 TGTCGAAAACGAAGGTCCCTAT 59.436 45.455 0.00 0.00 0.00 2.57
6523 6731 1.962807 TGTCGAAAACGAAGGTCCCTA 59.037 47.619 0.00 0.00 0.00 3.53
6524 6732 0.754472 TGTCGAAAACGAAGGTCCCT 59.246 50.000 0.00 0.00 0.00 4.20
6525 6733 3.294079 TGTCGAAAACGAAGGTCCC 57.706 52.632 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.