Multiple sequence alignment - TraesCS2A01G269800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G269800 chr2A 100.000 2786 0 0 1 2786 437159450 437162235 0.000000e+00 5145.0
1 TraesCS2A01G269800 chr2A 75.497 151 23 12 397 535 163675536 163675684 8.330000e-06 62.1
2 TraesCS2A01G269800 chr2B 95.993 1223 44 1 660 1877 398527961 398529183 0.000000e+00 1982.0
3 TraesCS2A01G269800 chr2B 88.333 660 51 19 1 651 398524617 398525259 0.000000e+00 769.0
4 TraesCS2A01G269800 chr2B 85.579 423 36 15 1886 2301 398529243 398529647 1.190000e-113 420.0
5 TraesCS2A01G269800 chr2B 85.714 329 40 4 773 1098 398525145 398525469 9.560000e-90 340.0
6 TraesCS2A01G269800 chr2D 96.101 1026 36 4 808 1830 330214041 330215065 0.000000e+00 1670.0
7 TraesCS2A01G269800 chr2D 90.030 662 40 19 1 651 330179068 330179714 0.000000e+00 833.0
8 TraesCS2A01G269800 chr2D 89.085 568 49 10 1835 2400 330215229 330215785 0.000000e+00 693.0
9 TraesCS2A01G269800 chr2D 86.930 329 37 3 773 1098 330179600 330179925 5.670000e-97 364.0
10 TraesCS2A01G269800 chr2D 90.688 247 20 3 2524 2769 318355329 318355085 2.680000e-85 326.0
11 TraesCS2A01G269800 chr1D 92.946 241 14 3 2526 2765 188515201 188514963 5.710000e-92 348.0
12 TraesCS2A01G269800 chr5D 93.191 235 15 1 2526 2759 78336645 78336879 7.390000e-91 344.0
13 TraesCS2A01G269800 chr5D 91.736 242 16 4 2526 2765 112692319 112692558 1.600000e-87 333.0
14 TraesCS2A01G269800 chr5D 76.733 202 31 13 153 346 390009197 390009390 6.350000e-17 99.0
15 TraesCS2A01G269800 chr5D 92.000 50 2 1 391 440 496274732 496274779 4.980000e-08 69.4
16 TraesCS2A01G269800 chr6D 92.531 241 15 3 2526 2763 227986825 227986585 2.660000e-90 342.0
17 TraesCS2A01G269800 chr7D 92.149 242 18 1 2526 2766 290798141 290797900 9.560000e-90 340.0
18 TraesCS2A01G269800 chr7D 92.083 240 17 2 2526 2764 261385892 261385654 1.240000e-88 337.0
19 TraesCS2A01G269800 chr5B 92.797 236 15 2 2526 2760 226834398 226834164 9.560000e-90 340.0
20 TraesCS2A01G269800 chr5B 92.797 236 15 2 2526 2760 226931579 226931345 9.560000e-90 340.0
21 TraesCS2A01G269800 chr5B 75.080 313 45 25 43 346 469990468 469990756 6.310000e-22 115.0
22 TraesCS2A01G269800 chrUn 83.239 352 30 16 1 347 237124687 237125014 2.100000e-76 296.0
23 TraesCS2A01G269800 chrUn 80.845 355 38 14 1 350 206998221 206997892 4.610000e-63 252.0
24 TraesCS2A01G269800 chr6B 86.316 190 19 6 1 185 79796090 79795903 1.690000e-47 200.0
25 TraesCS2A01G269800 chr5A 88.060 67 3 3 397 458 620159389 620159455 1.070000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G269800 chr2A 437159450 437162235 2785 False 5145.00 5145 100.00000 1 2786 1 chr2A.!!$F2 2785
1 TraesCS2A01G269800 chr2B 398524617 398529647 5030 False 877.75 1982 88.90475 1 2301 4 chr2B.!!$F1 2300
2 TraesCS2A01G269800 chr2D 330214041 330215785 1744 False 1181.50 1670 92.59300 808 2400 2 chr2D.!!$F2 1592
3 TraesCS2A01G269800 chr2D 330179068 330179925 857 False 598.50 833 88.48000 1 1098 2 chr2D.!!$F1 1097

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 785 0.185901 TAAGGATACCGCCTACCCGT 59.814 55.0 0.0 0.0 37.26 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2465 5644 0.031111 TACCTACTCTGCCATGGCCT 60.031 55.0 33.44 15.5 41.09 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 75 7.751047 TTTTCGTAGATGACTGTATTAGTGC 57.249 36.000 0.00 0.00 36.38 4.40
130 135 1.598430 CGGTGTTTCGTCGGCAAAAAT 60.598 47.619 0.00 0.00 0.00 1.82
131 136 2.349627 CGGTGTTTCGTCGGCAAAAATA 60.350 45.455 0.00 0.00 0.00 1.40
151 156 9.853177 AAAAATAAACAAAATTGGGGTGACATA 57.147 25.926 0.00 0.00 0.00 2.29
172 177 7.836842 ACATATTGGGATAACTTTTGGTGTTC 58.163 34.615 0.00 0.00 0.00 3.18
173 178 7.673926 ACATATTGGGATAACTTTTGGTGTTCT 59.326 33.333 0.00 0.00 0.00 3.01
175 180 9.936329 ATATTGGGATAACTTTTGGTGTTCTAT 57.064 29.630 0.00 0.00 0.00 1.98
176 181 8.664669 ATTGGGATAACTTTTGGTGTTCTATT 57.335 30.769 0.00 0.00 0.00 1.73
177 182 8.485578 TTGGGATAACTTTTGGTGTTCTATTT 57.514 30.769 0.00 0.00 0.00 1.40
178 183 7.891561 TGGGATAACTTTTGGTGTTCTATTTG 58.108 34.615 0.00 0.00 0.00 2.32
179 184 7.507616 TGGGATAACTTTTGGTGTTCTATTTGT 59.492 33.333 0.00 0.00 0.00 2.83
180 185 8.364894 GGGATAACTTTTGGTGTTCTATTTGTT 58.635 33.333 0.00 0.00 0.00 2.83
202 210 3.441496 TTTCTTTTGCACAAGCCAGAG 57.559 42.857 7.76 0.00 41.13 3.35
231 239 4.792528 TCTTTTTGCCTCAAAATTTGCG 57.207 36.364 0.00 0.00 41.89 4.85
282 290 9.218440 ACACACAATCTTTTTGTCTTGATTTTT 57.782 25.926 0.00 0.00 0.00 1.94
311 319 8.759481 TCATTTTAAAATTTTCTTTTGGCCCT 57.241 26.923 10.77 0.00 0.00 5.19
449 460 9.934190 ATGTCATGTGCATTTTTAAAGAAAAAC 57.066 25.926 0.00 0.00 45.03 2.43
602 618 4.182693 TCCGTAACCAGTCATGTAAGTG 57.817 45.455 0.00 0.00 0.00 3.16
603 619 3.056393 TCCGTAACCAGTCATGTAAGTGG 60.056 47.826 6.71 6.71 44.10 4.00
617 633 4.964593 TGTAAGTGGTTACAACTTCCTCC 58.035 43.478 8.59 0.00 44.53 4.30
618 634 4.409574 TGTAAGTGGTTACAACTTCCTCCA 59.590 41.667 8.59 0.02 44.53 3.86
619 635 4.513406 AAGTGGTTACAACTTCCTCCAA 57.487 40.909 0.00 0.00 0.00 3.53
620 636 4.513406 AGTGGTTACAACTTCCTCCAAA 57.487 40.909 0.00 0.00 0.00 3.28
621 637 4.862371 AGTGGTTACAACTTCCTCCAAAA 58.138 39.130 0.00 0.00 0.00 2.44
622 638 5.454966 AGTGGTTACAACTTCCTCCAAAAT 58.545 37.500 0.00 0.00 0.00 1.82
623 639 5.535030 AGTGGTTACAACTTCCTCCAAAATC 59.465 40.000 0.00 0.00 0.00 2.17
624 640 5.535030 GTGGTTACAACTTCCTCCAAAATCT 59.465 40.000 0.00 0.00 0.00 2.40
625 641 5.768164 TGGTTACAACTTCCTCCAAAATCTC 59.232 40.000 0.00 0.00 0.00 2.75
626 642 5.768164 GGTTACAACTTCCTCCAAAATCTCA 59.232 40.000 0.00 0.00 0.00 3.27
627 643 6.264518 GGTTACAACTTCCTCCAAAATCTCAA 59.735 38.462 0.00 0.00 0.00 3.02
628 644 7.363431 GTTACAACTTCCTCCAAAATCTCAAG 58.637 38.462 0.00 0.00 0.00 3.02
629 645 5.449553 ACAACTTCCTCCAAAATCTCAAGT 58.550 37.500 0.00 0.00 0.00 3.16
630 646 5.532779 ACAACTTCCTCCAAAATCTCAAGTC 59.467 40.000 0.00 0.00 0.00 3.01
631 647 5.310409 ACTTCCTCCAAAATCTCAAGTCA 57.690 39.130 0.00 0.00 0.00 3.41
632 648 5.066593 ACTTCCTCCAAAATCTCAAGTCAC 58.933 41.667 0.00 0.00 0.00 3.67
633 649 4.982241 TCCTCCAAAATCTCAAGTCACT 57.018 40.909 0.00 0.00 0.00 3.41
634 650 6.043243 ACTTCCTCCAAAATCTCAAGTCACTA 59.957 38.462 0.00 0.00 0.00 2.74
635 651 6.042638 TCCTCCAAAATCTCAAGTCACTAG 57.957 41.667 0.00 0.00 0.00 2.57
636 652 5.544176 TCCTCCAAAATCTCAAGTCACTAGT 59.456 40.000 0.00 0.00 0.00 2.57
637 653 5.641209 CCTCCAAAATCTCAAGTCACTAGTG 59.359 44.000 17.17 17.17 0.00 2.74
638 654 4.997395 TCCAAAATCTCAAGTCACTAGTGC 59.003 41.667 18.45 12.92 0.00 4.40
639 655 4.756642 CCAAAATCTCAAGTCACTAGTGCA 59.243 41.667 18.45 4.52 0.00 4.57
640 656 5.334414 CCAAAATCTCAAGTCACTAGTGCAC 60.334 44.000 18.45 9.40 0.00 4.57
641 657 4.607293 AATCTCAAGTCACTAGTGCACA 57.393 40.909 21.04 4.13 0.00 4.57
642 658 4.815533 ATCTCAAGTCACTAGTGCACAT 57.184 40.909 21.04 6.83 0.00 3.21
643 659 3.917988 TCTCAAGTCACTAGTGCACATG 58.082 45.455 21.04 17.71 0.00 3.21
644 660 2.414481 CTCAAGTCACTAGTGCACATGC 59.586 50.000 21.04 10.11 42.50 4.06
655 671 3.049674 CACATGCACGCCTCGGTT 61.050 61.111 0.00 0.00 0.00 4.44
656 672 2.281484 ACATGCACGCCTCGGTTT 60.281 55.556 0.00 0.00 0.00 3.27
657 673 1.004320 ACATGCACGCCTCGGTTTA 60.004 52.632 0.00 0.00 0.00 2.01
658 674 0.392461 ACATGCACGCCTCGGTTTAT 60.392 50.000 0.00 0.00 0.00 1.40
659 675 1.134640 ACATGCACGCCTCGGTTTATA 60.135 47.619 0.00 0.00 0.00 0.98
660 676 1.937223 CATGCACGCCTCGGTTTATAA 59.063 47.619 0.00 0.00 0.00 0.98
661 677 2.096220 TGCACGCCTCGGTTTATAAA 57.904 45.000 0.00 0.00 0.00 1.40
662 678 2.424557 TGCACGCCTCGGTTTATAAAA 58.575 42.857 0.00 0.00 0.00 1.52
663 679 2.417239 TGCACGCCTCGGTTTATAAAAG 59.583 45.455 0.00 0.00 0.00 2.27
664 680 2.674357 GCACGCCTCGGTTTATAAAAGA 59.326 45.455 0.00 2.34 0.00 2.52
665 681 3.311596 GCACGCCTCGGTTTATAAAAGAT 59.688 43.478 0.00 0.00 0.00 2.40
666 682 4.552184 GCACGCCTCGGTTTATAAAAGATC 60.552 45.833 0.00 0.00 0.00 2.75
667 683 4.809426 CACGCCTCGGTTTATAAAAGATCT 59.191 41.667 0.00 0.00 0.00 2.75
668 684 4.809426 ACGCCTCGGTTTATAAAAGATCTG 59.191 41.667 0.00 0.00 0.00 2.90
669 685 5.047847 CGCCTCGGTTTATAAAAGATCTGA 58.952 41.667 0.00 0.00 0.00 3.27
670 686 5.050972 CGCCTCGGTTTATAAAAGATCTGAC 60.051 44.000 0.00 0.00 0.00 3.51
671 687 5.050972 GCCTCGGTTTATAAAAGATCTGACG 60.051 44.000 0.00 0.00 0.00 4.35
672 688 6.040878 CCTCGGTTTATAAAAGATCTGACGT 58.959 40.000 0.00 0.00 0.00 4.34
673 689 6.534079 CCTCGGTTTATAAAAGATCTGACGTT 59.466 38.462 0.00 0.00 0.00 3.99
674 690 7.254017 CCTCGGTTTATAAAAGATCTGACGTTC 60.254 40.741 0.00 0.00 0.00 3.95
675 691 6.252015 TCGGTTTATAAAAGATCTGACGTTCG 59.748 38.462 0.00 0.00 0.00 3.95
676 692 6.183324 GGTTTATAAAAGATCTGACGTTCGC 58.817 40.000 0.00 0.00 0.00 4.70
677 693 5.961395 TTATAAAAGATCTGACGTTCGCC 57.039 39.130 0.00 0.00 0.00 5.54
678 694 1.439679 AAAAGATCTGACGTTCGCCC 58.560 50.000 0.00 0.00 0.00 6.13
679 695 0.320374 AAAGATCTGACGTTCGCCCA 59.680 50.000 0.00 0.00 0.00 5.36
680 696 0.537188 AAGATCTGACGTTCGCCCAT 59.463 50.000 0.00 0.00 0.00 4.00
681 697 0.537188 AGATCTGACGTTCGCCCATT 59.463 50.000 0.00 0.00 0.00 3.16
682 698 1.754803 AGATCTGACGTTCGCCCATTA 59.245 47.619 0.00 0.00 0.00 1.90
683 699 2.365617 AGATCTGACGTTCGCCCATTAT 59.634 45.455 0.00 0.00 0.00 1.28
684 700 3.572682 AGATCTGACGTTCGCCCATTATA 59.427 43.478 0.00 0.00 0.00 0.98
685 701 3.804786 TCTGACGTTCGCCCATTATAA 57.195 42.857 0.00 0.00 0.00 0.98
686 702 4.330944 TCTGACGTTCGCCCATTATAAT 57.669 40.909 0.00 0.00 0.00 1.28
687 703 4.699637 TCTGACGTTCGCCCATTATAATT 58.300 39.130 0.00 0.00 0.00 1.40
688 704 5.120399 TCTGACGTTCGCCCATTATAATTT 58.880 37.500 0.00 0.00 0.00 1.82
689 705 5.587043 TCTGACGTTCGCCCATTATAATTTT 59.413 36.000 0.00 0.00 0.00 1.82
690 706 5.812652 TGACGTTCGCCCATTATAATTTTC 58.187 37.500 0.00 0.00 0.00 2.29
691 707 5.587043 TGACGTTCGCCCATTATAATTTTCT 59.413 36.000 0.00 0.00 0.00 2.52
692 708 6.094325 TGACGTTCGCCCATTATAATTTTCTT 59.906 34.615 0.00 0.00 0.00 2.52
693 709 7.280428 TGACGTTCGCCCATTATAATTTTCTTA 59.720 33.333 0.00 0.00 0.00 2.10
694 710 7.987649 ACGTTCGCCCATTATAATTTTCTTAA 58.012 30.769 0.00 0.00 0.00 1.85
695 711 8.460428 ACGTTCGCCCATTATAATTTTCTTAAA 58.540 29.630 0.00 0.00 0.00 1.52
696 712 9.291664 CGTTCGCCCATTATAATTTTCTTAAAA 57.708 29.630 0.00 0.00 34.41 1.52
699 715 9.796120 TCGCCCATTATAATTTTCTTAAAACTG 57.204 29.630 0.00 0.00 32.37 3.16
700 716 9.796120 CGCCCATTATAATTTTCTTAAAACTGA 57.204 29.630 0.00 0.00 32.37 3.41
716 732 9.334693 CTTAAAACTGATCATTGACAACTTAGC 57.665 33.333 0.00 0.00 0.00 3.09
717 733 7.516198 AAAACTGATCATTGACAACTTAGCT 57.484 32.000 0.00 0.00 0.00 3.32
718 734 8.621532 AAAACTGATCATTGACAACTTAGCTA 57.378 30.769 0.00 0.00 0.00 3.32
719 735 8.798859 AAACTGATCATTGACAACTTAGCTAT 57.201 30.769 0.00 0.00 0.00 2.97
720 736 8.798859 AACTGATCATTGACAACTTAGCTATT 57.201 30.769 0.00 0.00 0.00 1.73
721 737 8.798859 ACTGATCATTGACAACTTAGCTATTT 57.201 30.769 0.00 0.00 0.00 1.40
722 738 8.671921 ACTGATCATTGACAACTTAGCTATTTG 58.328 33.333 12.08 12.08 0.00 2.32
723 739 7.475015 TGATCATTGACAACTTAGCTATTTGC 58.525 34.615 13.15 8.39 43.29 3.68
724 740 6.816134 TCATTGACAACTTAGCTATTTGCA 57.184 33.333 13.15 10.21 45.94 4.08
725 741 6.611381 TCATTGACAACTTAGCTATTTGCAC 58.389 36.000 13.15 9.48 45.94 4.57
726 742 6.430925 TCATTGACAACTTAGCTATTTGCACT 59.569 34.615 13.15 6.40 45.94 4.40
727 743 5.862924 TGACAACTTAGCTATTTGCACTC 57.137 39.130 13.15 6.63 45.94 3.51
728 744 4.695455 TGACAACTTAGCTATTTGCACTCC 59.305 41.667 13.15 2.61 45.94 3.85
729 745 4.911390 ACAACTTAGCTATTTGCACTCCT 58.089 39.130 13.15 0.00 45.94 3.69
730 746 4.938226 ACAACTTAGCTATTTGCACTCCTC 59.062 41.667 13.15 0.00 45.94 3.71
731 747 3.786635 ACTTAGCTATTTGCACTCCTCG 58.213 45.455 0.00 0.00 45.94 4.63
732 748 2.890808 TAGCTATTTGCACTCCTCGG 57.109 50.000 0.00 0.00 45.94 4.63
733 749 0.905357 AGCTATTTGCACTCCTCGGT 59.095 50.000 0.00 0.00 45.94 4.69
734 750 1.279271 AGCTATTTGCACTCCTCGGTT 59.721 47.619 0.00 0.00 45.94 4.44
735 751 2.084546 GCTATTTGCACTCCTCGGTTT 58.915 47.619 0.00 0.00 42.31 3.27
736 752 3.055385 AGCTATTTGCACTCCTCGGTTTA 60.055 43.478 0.00 0.00 45.94 2.01
737 753 3.877508 GCTATTTGCACTCCTCGGTTTAT 59.122 43.478 0.00 0.00 42.31 1.40
738 754 4.260784 GCTATTTGCACTCCTCGGTTTATG 60.261 45.833 0.00 0.00 42.31 1.90
739 755 3.410631 TTTGCACTCCTCGGTTTATGA 57.589 42.857 0.00 0.00 0.00 2.15
740 756 3.410631 TTGCACTCCTCGGTTTATGAA 57.589 42.857 0.00 0.00 0.00 2.57
741 757 3.410631 TGCACTCCTCGGTTTATGAAA 57.589 42.857 0.00 0.00 0.00 2.69
742 758 3.745799 TGCACTCCTCGGTTTATGAAAA 58.254 40.909 0.00 0.00 0.00 2.29
743 759 3.500680 TGCACTCCTCGGTTTATGAAAAC 59.499 43.478 0.00 0.00 43.58 2.43
755 771 7.605410 GGTTTATGAAAACGAGTGATAAGGA 57.395 36.000 0.00 0.00 44.97 3.36
756 772 8.209917 GGTTTATGAAAACGAGTGATAAGGAT 57.790 34.615 0.00 0.00 44.97 3.24
757 773 9.321562 GGTTTATGAAAACGAGTGATAAGGATA 57.678 33.333 0.00 0.00 44.97 2.59
759 775 8.882415 TTATGAAAACGAGTGATAAGGATACC 57.118 34.615 0.00 0.00 37.17 2.73
760 776 5.345702 TGAAAACGAGTGATAAGGATACCG 58.654 41.667 0.00 0.00 37.17 4.02
761 777 3.366440 AACGAGTGATAAGGATACCGC 57.634 47.619 0.00 0.00 37.17 5.68
762 778 1.612463 ACGAGTGATAAGGATACCGCC 59.388 52.381 0.00 0.00 37.17 6.13
763 779 1.887198 CGAGTGATAAGGATACCGCCT 59.113 52.381 0.00 0.00 40.93 5.52
764 780 3.079578 CGAGTGATAAGGATACCGCCTA 58.920 50.000 0.00 0.00 37.26 3.93
765 781 3.119919 CGAGTGATAAGGATACCGCCTAC 60.120 52.174 0.00 0.00 37.26 3.18
766 782 3.163467 AGTGATAAGGATACCGCCTACC 58.837 50.000 0.00 0.00 37.26 3.18
767 783 2.233186 GTGATAAGGATACCGCCTACCC 59.767 54.545 0.00 0.00 37.26 3.69
768 784 1.475682 GATAAGGATACCGCCTACCCG 59.524 57.143 0.00 0.00 37.26 5.28
769 785 0.185901 TAAGGATACCGCCTACCCGT 59.814 55.000 0.00 0.00 37.26 5.28
770 786 1.397390 AAGGATACCGCCTACCCGTG 61.397 60.000 0.00 0.00 37.26 4.94
771 787 2.732658 GATACCGCCTACCCGTGG 59.267 66.667 0.00 0.00 39.45 4.94
773 789 2.680340 TACCGCCTACCCGTGGTA 59.320 61.111 3.25 3.25 44.86 3.25
774 790 1.000270 TACCGCCTACCCGTGGTAA 60.000 57.895 4.63 0.00 44.86 2.85
775 791 1.319614 TACCGCCTACCCGTGGTAAC 61.320 60.000 4.63 0.42 44.86 2.50
776 792 3.957260 TACCGCCTACCCGTGGTAACA 62.957 57.143 4.63 0.00 44.86 2.41
797 813 9.916397 GTAACAATTTCTAATACCTCATGTTCG 57.084 33.333 0.00 0.00 31.62 3.95
798 814 8.786826 AACAATTTCTAATACCTCATGTTCGA 57.213 30.769 0.00 0.00 0.00 3.71
799 815 8.786826 ACAATTTCTAATACCTCATGTTCGAA 57.213 30.769 0.00 0.00 0.00 3.71
800 816 8.665685 ACAATTTCTAATACCTCATGTTCGAAC 58.334 33.333 21.42 21.42 0.00 3.95
801 817 6.880822 TTTCTAATACCTCATGTTCGAACG 57.119 37.500 22.48 10.09 0.00 3.95
802 818 5.571784 TCTAATACCTCATGTTCGAACGT 57.428 39.130 22.48 19.98 0.00 3.99
803 819 5.337554 TCTAATACCTCATGTTCGAACGTG 58.662 41.667 34.56 34.56 45.13 4.49
804 820 1.705256 TACCTCATGTTCGAACGTGC 58.295 50.000 35.18 10.68 43.81 5.34
805 821 0.949105 ACCTCATGTTCGAACGTGCC 60.949 55.000 35.18 10.32 43.81 5.01
806 822 1.635663 CCTCATGTTCGAACGTGCCC 61.636 60.000 35.18 9.62 43.81 5.36
807 823 0.948623 CTCATGTTCGAACGTGCCCA 60.949 55.000 35.18 22.39 43.81 5.36
808 824 0.321210 TCATGTTCGAACGTGCCCAT 60.321 50.000 35.18 16.27 43.81 4.00
809 825 1.066787 TCATGTTCGAACGTGCCCATA 60.067 47.619 35.18 20.92 43.81 2.74
810 826 1.735018 CATGTTCGAACGTGCCCATAA 59.265 47.619 31.33 9.34 38.88 1.90
811 827 1.434555 TGTTCGAACGTGCCCATAAG 58.565 50.000 22.48 0.00 0.00 1.73
821 837 3.069729 ACGTGCCCATAAGTAATCCTCTC 59.930 47.826 0.00 0.00 0.00 3.20
830 846 6.183360 CCATAAGTAATCCTCTCCGTAACCAA 60.183 42.308 0.00 0.00 0.00 3.67
906 3859 1.419387 CCCCAAAGTTGGCATCCAAAA 59.581 47.619 4.43 0.00 45.73 2.44
1046 4002 0.398318 GCACTCCTTCTCACCCTTGT 59.602 55.000 0.00 0.00 0.00 3.16
1099 4055 2.253610 ACATTACCGAGGTCCTCAACA 58.746 47.619 19.15 0.00 0.00 3.33
1107 4063 0.328258 AGGTCCTCAACAAATCCCCG 59.672 55.000 0.00 0.00 0.00 5.73
1126 4082 1.792949 CGGAGTTCTTGACCTTCAACG 59.207 52.381 0.00 0.00 32.21 4.10
1503 4459 0.104855 TATCCGTCATGCAGGTCAGC 59.895 55.000 0.00 0.00 0.00 4.26
1521 4477 2.182496 CGCAGCAATCATTCCACCA 58.818 52.632 0.00 0.00 0.00 4.17
1630 4586 1.346538 GCTGAGACGCTTGAATCGC 59.653 57.895 0.00 0.00 0.00 4.58
1773 4729 1.220749 GCTCGTGGGGCTTGTGATA 59.779 57.895 0.00 0.00 0.00 2.15
1811 4768 2.817834 GCACAGCAACGGCCGATA 60.818 61.111 35.90 0.00 42.56 2.92
1833 4791 9.017669 CGATATTTAGCTTTACACGTCTAGTTT 57.982 33.333 0.00 0.00 0.00 2.66
1896 5067 6.940298 AGTACTTGTGTATGTTGGCTTGTTAT 59.060 34.615 0.00 0.00 0.00 1.89
1897 5068 8.098286 AGTACTTGTGTATGTTGGCTTGTTATA 58.902 33.333 0.00 0.00 0.00 0.98
1902 5073 8.341892 TGTGTATGTTGGCTTGTTATAATTCA 57.658 30.769 0.00 0.00 0.00 2.57
2011 5183 7.228706 TCCCTACTGACATTGACTTTTTCTTTC 59.771 37.037 0.00 0.00 0.00 2.62
2018 5190 6.495706 ACATTGACTTTTTCTTTCGAAGGAC 58.504 36.000 9.80 0.00 0.00 3.85
2033 5205 0.537371 AGGACCCAAGAAAACGCCTG 60.537 55.000 0.00 0.00 0.00 4.85
2041 5213 4.035675 CCCAAGAAAACGCCTGATCTATTC 59.964 45.833 0.00 0.00 0.00 1.75
2154 5333 5.488645 TTAAAGACCTTGTCGTTTTGGAC 57.511 39.130 1.01 0.00 35.97 4.02
2163 5342 4.571372 TGTCGTTTTGGACAATTAACCC 57.429 40.909 0.00 0.00 43.55 4.11
2164 5343 3.003482 TGTCGTTTTGGACAATTAACCCG 59.997 43.478 0.00 0.00 43.55 5.28
2181 5360 0.883833 CCGCACTCCAGATTTGCTTT 59.116 50.000 0.00 0.00 33.90 3.51
2183 5362 2.487762 CCGCACTCCAGATTTGCTTTTA 59.512 45.455 0.00 0.00 33.90 1.52
2301 5480 9.129532 GTACTACTAATCAAGGTAGCCTAGAAA 57.870 37.037 0.00 0.00 39.01 2.52
2311 5490 5.030820 AGGTAGCCTAGAAAAGTACCACAT 58.969 41.667 0.00 0.00 36.39 3.21
2375 5554 7.259882 TGCATGTTCTTTGCAATATTAAGGAG 58.740 34.615 0.00 0.00 46.48 3.69
2378 5557 7.225784 TGTTCTTTGCAATATTAAGGAGCAA 57.774 32.000 0.00 6.15 42.74 3.91
2379 5558 7.090173 TGTTCTTTGCAATATTAAGGAGCAAC 58.910 34.615 0.00 0.00 43.94 4.17
2395 5574 1.299926 AACGAGCACACACGAGGAC 60.300 57.895 0.00 0.00 33.76 3.85
2400 5579 2.335011 CACACACGAGGACGCAGA 59.665 61.111 0.00 0.00 43.96 4.26
2401 5580 1.299850 CACACACGAGGACGCAGAA 60.300 57.895 0.00 0.00 43.96 3.02
2402 5581 0.874175 CACACACGAGGACGCAGAAA 60.874 55.000 0.00 0.00 43.96 2.52
2403 5582 0.874607 ACACACGAGGACGCAGAAAC 60.875 55.000 0.00 0.00 43.96 2.78
2404 5583 0.874175 CACACGAGGACGCAGAAACA 60.874 55.000 0.00 0.00 43.96 2.83
2405 5584 0.597637 ACACGAGGACGCAGAAACAG 60.598 55.000 0.00 0.00 43.96 3.16
2406 5585 1.006102 ACGAGGACGCAGAAACAGG 60.006 57.895 0.00 0.00 43.96 4.00
2407 5586 1.738099 CGAGGACGCAGAAACAGGG 60.738 63.158 0.00 0.00 0.00 4.45
2408 5587 2.032681 AGGACGCAGAAACAGGGC 59.967 61.111 0.00 0.00 0.00 5.19
2414 5593 2.668632 CAGAAACAGGGCGGGCTA 59.331 61.111 0.26 0.00 0.00 3.93
2415 5594 1.450312 CAGAAACAGGGCGGGCTAG 60.450 63.158 0.26 0.00 0.00 3.42
2416 5595 2.824489 GAAACAGGGCGGGCTAGC 60.824 66.667 6.04 6.04 0.00 3.42
2417 5596 3.330720 AAACAGGGCGGGCTAGCT 61.331 61.111 15.72 0.00 37.29 3.32
2418 5597 3.628646 AAACAGGGCGGGCTAGCTG 62.629 63.158 15.72 8.90 37.29 4.24
2432 5611 3.972227 GCTGGTGCTGGTGTGTAG 58.028 61.111 0.00 0.00 36.03 2.74
2433 5612 1.371183 GCTGGTGCTGGTGTGTAGA 59.629 57.895 0.00 0.00 36.03 2.59
2434 5613 0.671781 GCTGGTGCTGGTGTGTAGAG 60.672 60.000 0.00 0.00 36.03 2.43
2435 5614 0.969149 CTGGTGCTGGTGTGTAGAGA 59.031 55.000 0.00 0.00 0.00 3.10
2436 5615 0.969149 TGGTGCTGGTGTGTAGAGAG 59.031 55.000 0.00 0.00 0.00 3.20
2437 5616 0.247736 GGTGCTGGTGTGTAGAGAGG 59.752 60.000 0.00 0.00 0.00 3.69
2438 5617 0.390472 GTGCTGGTGTGTAGAGAGGC 60.390 60.000 0.00 0.00 0.00 4.70
2439 5618 0.831711 TGCTGGTGTGTAGAGAGGCA 60.832 55.000 0.00 0.00 0.00 4.75
2440 5619 0.321671 GCTGGTGTGTAGAGAGGCAA 59.678 55.000 0.00 0.00 0.00 4.52
2441 5620 1.674221 GCTGGTGTGTAGAGAGGCAAG 60.674 57.143 0.00 0.00 0.00 4.01
2442 5621 0.976641 TGGTGTGTAGAGAGGCAAGG 59.023 55.000 0.00 0.00 0.00 3.61
2443 5622 1.267121 GGTGTGTAGAGAGGCAAGGA 58.733 55.000 0.00 0.00 0.00 3.36
2444 5623 1.205893 GGTGTGTAGAGAGGCAAGGAG 59.794 57.143 0.00 0.00 0.00 3.69
2445 5624 1.205893 GTGTGTAGAGAGGCAAGGAGG 59.794 57.143 0.00 0.00 0.00 4.30
2446 5625 1.077169 TGTGTAGAGAGGCAAGGAGGA 59.923 52.381 0.00 0.00 0.00 3.71
2447 5626 1.754226 GTGTAGAGAGGCAAGGAGGAG 59.246 57.143 0.00 0.00 0.00 3.69
2448 5627 1.342474 TGTAGAGAGGCAAGGAGGAGG 60.342 57.143 0.00 0.00 0.00 4.30
2449 5628 0.397816 TAGAGAGGCAAGGAGGAGGC 60.398 60.000 0.00 0.00 0.00 4.70
2450 5629 1.688884 GAGAGGCAAGGAGGAGGCT 60.689 63.158 0.00 0.00 43.98 4.58
2451 5630 0.397816 GAGAGGCAAGGAGGAGGCTA 60.398 60.000 0.00 0.00 41.09 3.93
2452 5631 0.398381 AGAGGCAAGGAGGAGGCTAG 60.398 60.000 0.00 0.00 41.09 3.42
2453 5632 2.038814 GAGGCAAGGAGGAGGCTAGC 62.039 65.000 6.04 6.04 41.09 3.42
2454 5633 2.370445 GGCAAGGAGGAGGCTAGCA 61.370 63.158 18.24 0.00 0.00 3.49
2455 5634 1.145819 GCAAGGAGGAGGCTAGCAG 59.854 63.158 18.24 0.00 0.00 4.24
2456 5635 1.621672 GCAAGGAGGAGGCTAGCAGT 61.622 60.000 18.24 2.17 0.00 4.40
2457 5636 0.177604 CAAGGAGGAGGCTAGCAGTG 59.822 60.000 18.24 0.00 0.00 3.66
2458 5637 0.041833 AAGGAGGAGGCTAGCAGTGA 59.958 55.000 18.24 0.00 0.00 3.41
2459 5638 0.264359 AGGAGGAGGCTAGCAGTGAT 59.736 55.000 18.24 0.00 0.00 3.06
2460 5639 0.392336 GGAGGAGGCTAGCAGTGATG 59.608 60.000 18.24 0.00 0.00 3.07
2461 5640 1.407936 GAGGAGGCTAGCAGTGATGA 58.592 55.000 18.24 0.00 0.00 2.92
2462 5641 1.340889 GAGGAGGCTAGCAGTGATGAG 59.659 57.143 18.24 0.00 0.00 2.90
2463 5642 0.392336 GGAGGCTAGCAGTGATGAGG 59.608 60.000 18.24 0.00 0.00 3.86
2464 5643 0.392336 GAGGCTAGCAGTGATGAGGG 59.608 60.000 18.24 0.00 0.00 4.30
2465 5644 0.031716 AGGCTAGCAGTGATGAGGGA 60.032 55.000 18.24 0.00 0.00 4.20
2466 5645 0.392336 GGCTAGCAGTGATGAGGGAG 59.608 60.000 18.24 0.00 0.00 4.30
2467 5646 0.392336 GCTAGCAGTGATGAGGGAGG 59.608 60.000 10.63 0.00 0.00 4.30
2468 5647 0.392336 CTAGCAGTGATGAGGGAGGC 59.608 60.000 0.00 0.00 0.00 4.70
2469 5648 1.050988 TAGCAGTGATGAGGGAGGCC 61.051 60.000 0.00 0.00 0.00 5.19
2470 5649 2.673200 GCAGTGATGAGGGAGGCCA 61.673 63.158 5.01 0.00 0.00 5.36
2471 5650 1.992519 GCAGTGATGAGGGAGGCCAT 61.993 60.000 5.01 0.00 0.00 4.40
2472 5651 0.179026 CAGTGATGAGGGAGGCCATG 60.179 60.000 5.01 0.00 0.00 3.66
2473 5652 1.150081 GTGATGAGGGAGGCCATGG 59.850 63.158 7.63 7.63 0.00 3.66
2474 5653 2.114838 GATGAGGGAGGCCATGGC 59.885 66.667 29.47 29.47 41.06 4.40
2475 5654 2.697263 ATGAGGGAGGCCATGGCA 60.697 61.111 36.56 16.15 44.11 4.92
2476 5655 2.693896 GATGAGGGAGGCCATGGCAG 62.694 65.000 36.56 0.31 44.11 4.85
2477 5656 3.092511 GAGGGAGGCCATGGCAGA 61.093 66.667 36.56 0.00 44.11 4.26
2478 5657 3.095163 AGGGAGGCCATGGCAGAG 61.095 66.667 36.56 0.00 44.11 3.35
2479 5658 3.415087 GGGAGGCCATGGCAGAGT 61.415 66.667 36.56 18.67 44.11 3.24
2480 5659 2.072487 GGGAGGCCATGGCAGAGTA 61.072 63.158 36.56 0.00 44.11 2.59
2481 5660 1.449353 GGAGGCCATGGCAGAGTAG 59.551 63.158 36.56 0.00 44.11 2.57
2482 5661 1.449353 GAGGCCATGGCAGAGTAGG 59.551 63.158 36.56 0.00 44.11 3.18
2483 5662 1.307343 AGGCCATGGCAGAGTAGGT 60.307 57.895 36.56 8.50 44.11 3.08
2484 5663 0.031111 AGGCCATGGCAGAGTAGGTA 60.031 55.000 36.56 0.00 44.11 3.08
2485 5664 0.394565 GGCCATGGCAGAGTAGGTAG 59.605 60.000 36.56 0.00 44.11 3.18
2486 5665 0.250081 GCCATGGCAGAGTAGGTAGC 60.250 60.000 32.08 0.00 41.49 3.58
2487 5666 0.032678 CCATGGCAGAGTAGGTAGCG 59.967 60.000 0.00 0.00 0.00 4.26
2488 5667 0.032678 CATGGCAGAGTAGGTAGCGG 59.967 60.000 0.00 0.00 0.00 5.52
2489 5668 0.106167 ATGGCAGAGTAGGTAGCGGA 60.106 55.000 0.00 0.00 0.00 5.54
2490 5669 1.035932 TGGCAGAGTAGGTAGCGGAC 61.036 60.000 0.00 0.00 0.00 4.79
2491 5670 1.355916 GCAGAGTAGGTAGCGGACG 59.644 63.158 0.00 0.00 0.00 4.79
2492 5671 1.355916 CAGAGTAGGTAGCGGACGC 59.644 63.158 8.91 8.91 42.33 5.19
2502 5681 2.279517 GCGGACGCTGACCCATAG 60.280 66.667 9.76 0.00 38.26 2.23
2503 5682 2.279517 CGGACGCTGACCCATAGC 60.280 66.667 0.00 0.00 37.80 2.97
2504 5683 2.109181 GGACGCTGACCCATAGCC 59.891 66.667 0.00 0.00 37.90 3.93
2505 5684 2.731571 GGACGCTGACCCATAGCCA 61.732 63.158 0.00 0.00 37.90 4.75
2506 5685 1.227380 GACGCTGACCCATAGCCAG 60.227 63.158 0.00 0.00 37.90 4.85
2509 5688 4.872357 CTGACCCATAGCCAGCAG 57.128 61.111 0.00 0.00 0.00 4.24
2510 5689 2.215191 CTGACCCATAGCCAGCAGA 58.785 57.895 0.00 0.00 0.00 4.26
2511 5690 0.543277 CTGACCCATAGCCAGCAGAA 59.457 55.000 0.00 0.00 0.00 3.02
2512 5691 0.543277 TGACCCATAGCCAGCAGAAG 59.457 55.000 0.00 0.00 0.00 2.85
2513 5692 0.833287 GACCCATAGCCAGCAGAAGA 59.167 55.000 0.00 0.00 0.00 2.87
2514 5693 0.543749 ACCCATAGCCAGCAGAAGAC 59.456 55.000 0.00 0.00 0.00 3.01
2515 5694 0.531532 CCCATAGCCAGCAGAAGACG 60.532 60.000 0.00 0.00 0.00 4.18
2516 5695 0.531532 CCATAGCCAGCAGAAGACGG 60.532 60.000 0.00 0.00 0.00 4.79
2517 5696 1.144936 ATAGCCAGCAGAAGACGGC 59.855 57.895 0.00 0.00 45.23 5.68
2519 5698 3.123620 GCCAGCAGAAGACGGCAG 61.124 66.667 0.00 0.00 44.25 4.85
2520 5699 2.659016 CCAGCAGAAGACGGCAGA 59.341 61.111 0.00 0.00 39.53 4.26
2521 5700 1.739562 CCAGCAGAAGACGGCAGAC 60.740 63.158 0.00 0.00 39.53 3.51
2535 5714 4.600012 CGGCAGACGTCTTATCATTTTT 57.400 40.909 17.26 0.00 37.93 1.94
2536 5715 4.334443 CGGCAGACGTCTTATCATTTTTG 58.666 43.478 17.26 2.30 37.93 2.44
2537 5716 4.662145 GGCAGACGTCTTATCATTTTTGG 58.338 43.478 17.26 0.68 0.00 3.28
2538 5717 4.394920 GGCAGACGTCTTATCATTTTTGGA 59.605 41.667 17.26 0.00 0.00 3.53
2539 5718 5.066505 GGCAGACGTCTTATCATTTTTGGAT 59.933 40.000 17.26 0.00 0.00 3.41
2540 5719 5.967674 GCAGACGTCTTATCATTTTTGGATG 59.032 40.000 17.26 0.32 0.00 3.51
2541 5720 6.403636 GCAGACGTCTTATCATTTTTGGATGT 60.404 38.462 17.26 0.00 0.00 3.06
2542 5721 7.530010 CAGACGTCTTATCATTTTTGGATGTT 58.470 34.615 17.26 0.00 0.00 2.71
2543 5722 8.023128 CAGACGTCTTATCATTTTTGGATGTTT 58.977 33.333 17.26 0.00 0.00 2.83
2544 5723 8.576442 AGACGTCTTATCATTTTTGGATGTTTT 58.424 29.630 13.58 0.00 0.00 2.43
2545 5724 9.834628 GACGTCTTATCATTTTTGGATGTTTTA 57.165 29.630 8.70 0.00 0.00 1.52
2546 5725 9.620660 ACGTCTTATCATTTTTGGATGTTTTAC 57.379 29.630 0.00 0.00 0.00 2.01
2547 5726 9.619316 CGTCTTATCATTTTTGGATGTTTTACA 57.381 29.630 0.00 0.00 0.00 2.41
2600 5779 6.835819 TTGGGACTAATCTATCGACATAGG 57.164 41.667 0.00 0.00 33.79 2.57
2601 5780 5.262009 TGGGACTAATCTATCGACATAGGG 58.738 45.833 0.00 0.00 33.79 3.53
2602 5781 4.098196 GGGACTAATCTATCGACATAGGGC 59.902 50.000 0.00 0.00 33.79 5.19
2603 5782 4.098196 GGACTAATCTATCGACATAGGGCC 59.902 50.000 0.00 0.00 33.79 5.80
2604 5783 4.024670 ACTAATCTATCGACATAGGGCCC 58.975 47.826 16.46 16.46 33.79 5.80
2605 5784 2.623418 ATCTATCGACATAGGGCCCA 57.377 50.000 27.56 10.89 33.79 5.36
2606 5785 1.924731 TCTATCGACATAGGGCCCAG 58.075 55.000 27.56 16.27 33.79 4.45
2607 5786 1.147191 TCTATCGACATAGGGCCCAGT 59.853 52.381 27.56 19.79 33.79 4.00
2608 5787 1.273606 CTATCGACATAGGGCCCAGTG 59.726 57.143 27.56 23.81 0.00 3.66
2609 5788 2.044806 ATCGACATAGGGCCCAGTGC 62.045 60.000 27.56 15.89 40.16 4.40
2618 5797 2.730094 GCCCAGTGCCACTTGTTG 59.270 61.111 0.00 0.00 0.00 3.33
2619 5798 2.127232 GCCCAGTGCCACTTGTTGT 61.127 57.895 0.00 0.00 0.00 3.32
2620 5799 1.675720 GCCCAGTGCCACTTGTTGTT 61.676 55.000 0.00 0.00 0.00 2.83
2621 5800 0.823460 CCCAGTGCCACTTGTTGTTT 59.177 50.000 0.00 0.00 0.00 2.83
2622 5801 1.206849 CCCAGTGCCACTTGTTGTTTT 59.793 47.619 0.00 0.00 0.00 2.43
2623 5802 2.354604 CCCAGTGCCACTTGTTGTTTTT 60.355 45.455 0.00 0.00 0.00 1.94
2645 5824 8.736751 TTTTTACTTCGCAGAAAATCAATACC 57.263 30.769 0.00 0.00 45.90 2.73
2646 5825 7.441890 TTTACTTCGCAGAAAATCAATACCA 57.558 32.000 0.00 0.00 45.90 3.25
2647 5826 5.957842 ACTTCGCAGAAAATCAATACCAA 57.042 34.783 0.00 0.00 45.90 3.67
2648 5827 6.325919 ACTTCGCAGAAAATCAATACCAAA 57.674 33.333 0.00 0.00 45.90 3.28
2649 5828 6.924111 ACTTCGCAGAAAATCAATACCAAAT 58.076 32.000 0.00 0.00 45.90 2.32
2650 5829 6.808212 ACTTCGCAGAAAATCAATACCAAATG 59.192 34.615 0.00 0.00 45.90 2.32
2651 5830 5.649557 TCGCAGAAAATCAATACCAAATGG 58.350 37.500 0.00 0.00 42.17 3.16
2652 5831 5.417266 TCGCAGAAAATCAATACCAAATGGA 59.583 36.000 6.42 0.00 38.94 3.41
2653 5832 5.745294 CGCAGAAAATCAATACCAAATGGAG 59.255 40.000 6.42 0.00 38.94 3.86
2654 5833 6.625740 CGCAGAAAATCAATACCAAATGGAGT 60.626 38.462 6.42 0.00 38.94 3.85
2655 5834 6.753744 GCAGAAAATCAATACCAAATGGAGTC 59.246 38.462 6.42 0.00 38.94 3.36
2656 5835 7.260603 CAGAAAATCAATACCAAATGGAGTCC 58.739 38.462 6.42 0.73 38.94 3.85
2657 5836 6.953520 AGAAAATCAATACCAAATGGAGTCCA 59.046 34.615 15.88 15.88 38.94 4.02
2658 5837 7.454380 AGAAAATCAATACCAAATGGAGTCCAA 59.546 33.333 17.71 0.00 36.95 3.53
2659 5838 7.552050 AAATCAATACCAAATGGAGTCCAAA 57.448 32.000 17.71 0.00 36.95 3.28
2660 5839 5.975693 TCAATACCAAATGGAGTCCAAAC 57.024 39.130 17.71 0.00 36.95 2.93
2661 5840 4.457603 TCAATACCAAATGGAGTCCAAACG 59.542 41.667 17.71 7.02 36.95 3.60
2662 5841 0.958822 ACCAAATGGAGTCCAAACGC 59.041 50.000 17.71 0.00 36.95 4.84
2663 5842 0.109781 CCAAATGGAGTCCAAACGCG 60.110 55.000 17.71 3.53 36.95 6.01
2664 5843 0.109781 CAAATGGAGTCCAAACGCGG 60.110 55.000 17.71 0.00 36.95 6.46
2665 5844 1.862602 AAATGGAGTCCAAACGCGGC 61.863 55.000 17.71 0.00 36.95 6.53
2668 5847 3.039588 GAGTCCAAACGCGGCGAA 61.040 61.111 30.94 5.75 0.00 4.70
2669 5848 2.589442 AGTCCAAACGCGGCGAAA 60.589 55.556 30.94 6.12 0.00 3.46
2670 5849 2.426261 GTCCAAACGCGGCGAAAC 60.426 61.111 30.94 14.35 0.00 2.78
2671 5850 2.589442 TCCAAACGCGGCGAAACT 60.589 55.556 30.94 2.76 0.00 2.66
2672 5851 2.181521 TCCAAACGCGGCGAAACTT 61.182 52.632 30.94 9.99 0.00 2.66
2673 5852 1.298788 CCAAACGCGGCGAAACTTT 60.299 52.632 30.94 15.86 0.00 2.66
2674 5853 0.868177 CCAAACGCGGCGAAACTTTT 60.868 50.000 30.94 15.47 0.00 2.27
2675 5854 0.917939 CAAACGCGGCGAAACTTTTT 59.082 45.000 30.94 14.71 0.00 1.94
2676 5855 0.917939 AAACGCGGCGAAACTTTTTG 59.082 45.000 30.94 0.00 0.00 2.44
2677 5856 0.868177 AACGCGGCGAAACTTTTTGG 60.868 50.000 30.94 0.00 0.00 3.28
2678 5857 1.009449 CGCGGCGAAACTTTTTGGA 60.009 52.632 19.16 0.00 0.00 3.53
2679 5858 0.996727 CGCGGCGAAACTTTTTGGAG 60.997 55.000 19.16 0.00 0.00 3.86
2680 5859 0.309612 GCGGCGAAACTTTTTGGAGA 59.690 50.000 12.98 0.00 0.00 3.71
2681 5860 1.068541 GCGGCGAAACTTTTTGGAGAT 60.069 47.619 12.98 0.00 0.00 2.75
2682 5861 2.607038 GCGGCGAAACTTTTTGGAGATT 60.607 45.455 12.98 0.00 0.00 2.40
2683 5862 3.638484 CGGCGAAACTTTTTGGAGATTT 58.362 40.909 0.00 0.00 0.00 2.17
2684 5863 4.048504 CGGCGAAACTTTTTGGAGATTTT 58.951 39.130 0.00 0.00 0.00 1.82
2685 5864 4.506288 CGGCGAAACTTTTTGGAGATTTTT 59.494 37.500 0.00 0.00 0.00 1.94
2686 5865 5.332280 CGGCGAAACTTTTTGGAGATTTTTC 60.332 40.000 0.00 0.00 0.00 2.29
2687 5866 5.753438 GGCGAAACTTTTTGGAGATTTTTCT 59.247 36.000 0.00 0.00 0.00 2.52
2688 5867 6.292328 GGCGAAACTTTTTGGAGATTTTTCTG 60.292 38.462 0.00 0.00 0.00 3.02
2689 5868 6.475402 GCGAAACTTTTTGGAGATTTTTCTGA 59.525 34.615 0.00 0.00 0.00 3.27
2690 5869 7.010091 GCGAAACTTTTTGGAGATTTTTCTGAA 59.990 33.333 0.00 0.00 0.00 3.02
2691 5870 8.321005 CGAAACTTTTTGGAGATTTTTCTGAAC 58.679 33.333 0.00 0.00 0.00 3.18
2692 5871 8.492673 AAACTTTTTGGAGATTTTTCTGAACC 57.507 30.769 0.00 0.00 0.00 3.62
2693 5872 7.181569 ACTTTTTGGAGATTTTTCTGAACCA 57.818 32.000 0.00 0.00 0.00 3.67
2694 5873 7.267857 ACTTTTTGGAGATTTTTCTGAACCAG 58.732 34.615 0.00 0.00 0.00 4.00
2695 5874 7.124147 ACTTTTTGGAGATTTTTCTGAACCAGA 59.876 33.333 0.00 0.00 38.87 3.86
2696 5875 7.416964 TTTTGGAGATTTTTCTGAACCAGAA 57.583 32.000 5.38 5.38 46.93 3.02
2707 5886 6.624352 TTCTGAACCAGAAGACAAAAGATG 57.376 37.500 5.38 0.00 44.27 2.90
2708 5887 5.065914 TCTGAACCAGAAGACAAAAGATGG 58.934 41.667 0.00 0.00 37.57 3.51
2709 5888 4.144297 TGAACCAGAAGACAAAAGATGGG 58.856 43.478 0.00 0.00 31.95 4.00
2710 5889 2.519013 ACCAGAAGACAAAAGATGGGC 58.481 47.619 0.00 0.00 31.95 5.36
2711 5890 1.821136 CCAGAAGACAAAAGATGGGCC 59.179 52.381 0.00 0.00 0.00 5.80
2712 5891 2.517959 CAGAAGACAAAAGATGGGCCA 58.482 47.619 9.61 9.61 0.00 5.36
2713 5892 2.892852 CAGAAGACAAAAGATGGGCCAA 59.107 45.455 11.89 0.00 0.00 4.52
2714 5893 3.321682 CAGAAGACAAAAGATGGGCCAAA 59.678 43.478 11.89 0.00 0.00 3.28
2715 5894 3.575687 AGAAGACAAAAGATGGGCCAAAG 59.424 43.478 11.89 0.00 0.00 2.77
2716 5895 3.243359 AGACAAAAGATGGGCCAAAGA 57.757 42.857 11.89 0.00 0.00 2.52
2717 5896 3.575805 AGACAAAAGATGGGCCAAAGAA 58.424 40.909 11.89 0.00 0.00 2.52
2718 5897 3.575687 AGACAAAAGATGGGCCAAAGAAG 59.424 43.478 11.89 1.61 0.00 2.85
2719 5898 3.308401 ACAAAAGATGGGCCAAAGAAGT 58.692 40.909 11.89 2.33 0.00 3.01
2720 5899 4.479158 ACAAAAGATGGGCCAAAGAAGTA 58.521 39.130 11.89 0.00 0.00 2.24
2721 5900 4.280929 ACAAAAGATGGGCCAAAGAAGTAC 59.719 41.667 11.89 0.00 0.00 2.73
2722 5901 4.388577 AAAGATGGGCCAAAGAAGTACT 57.611 40.909 11.89 0.00 0.00 2.73
2723 5902 5.514500 AAAGATGGGCCAAAGAAGTACTA 57.486 39.130 11.89 0.00 0.00 1.82
2724 5903 4.762289 AGATGGGCCAAAGAAGTACTAG 57.238 45.455 11.89 0.00 0.00 2.57
2725 5904 4.362677 AGATGGGCCAAAGAAGTACTAGA 58.637 43.478 11.89 0.00 0.00 2.43
2726 5905 4.407296 AGATGGGCCAAAGAAGTACTAGAG 59.593 45.833 11.89 0.00 0.00 2.43
2727 5906 2.838202 TGGGCCAAAGAAGTACTAGAGG 59.162 50.000 2.13 0.00 0.00 3.69
2728 5907 2.170817 GGGCCAAAGAAGTACTAGAGGG 59.829 54.545 4.39 0.00 0.00 4.30
2729 5908 2.170817 GGCCAAAGAAGTACTAGAGGGG 59.829 54.545 0.00 0.00 0.00 4.79
2730 5909 2.838813 GCCAAAGAAGTACTAGAGGGGT 59.161 50.000 0.00 0.00 0.00 4.95
2731 5910 3.369576 GCCAAAGAAGTACTAGAGGGGTG 60.370 52.174 0.00 0.00 0.00 4.61
2732 5911 3.369576 CCAAAGAAGTACTAGAGGGGTGC 60.370 52.174 0.00 0.00 0.00 5.01
2733 5912 2.162264 AGAAGTACTAGAGGGGTGCC 57.838 55.000 0.00 0.00 0.00 5.01
2734 5913 1.121378 GAAGTACTAGAGGGGTGCCC 58.879 60.000 0.00 0.00 45.90 5.36
2756 5935 2.282462 GGGAGCACAACCCACCTG 60.282 66.667 0.00 0.00 46.05 4.00
2757 5936 2.282462 GGAGCACAACCCACCTGG 60.282 66.667 0.00 0.00 41.37 4.45
2774 5953 2.037847 GGCATGCCCAGAAACCCT 59.962 61.111 27.24 0.00 0.00 4.34
2775 5954 1.306296 GGCATGCCCAGAAACCCTA 59.694 57.895 27.24 0.00 0.00 3.53
2776 5955 0.753111 GGCATGCCCAGAAACCCTAG 60.753 60.000 27.24 0.00 0.00 3.02
2777 5956 0.753111 GCATGCCCAGAAACCCTAGG 60.753 60.000 6.36 0.06 0.00 3.02
2778 5957 0.106519 CATGCCCAGAAACCCTAGGG 60.107 60.000 27.36 27.36 44.37 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 54 4.024302 CGGCACTAATACAGTCATCTACGA 60.024 45.833 0.00 0.00 34.26 3.43
50 55 4.219802 CGGCACTAATACAGTCATCTACG 58.780 47.826 0.00 0.00 34.26 3.51
59 64 3.683989 CATGTTTGCGGCACTAATACAG 58.316 45.455 0.05 0.00 0.00 2.74
122 127 6.039829 TCACCCCAATTTTGTTTATTTTTGCC 59.960 34.615 0.00 0.00 0.00 4.52
130 135 7.390027 CCAATATGTCACCCCAATTTTGTTTA 58.610 34.615 0.00 0.00 0.00 2.01
131 136 6.237154 CCAATATGTCACCCCAATTTTGTTT 58.763 36.000 0.00 0.00 0.00 2.83
151 156 8.664669 AATAGAACACCAAAAGTTATCCCAAT 57.335 30.769 0.00 0.00 0.00 3.16
180 185 4.183101 CTCTGGCTTGTGCAAAAGAAAAA 58.817 39.130 21.21 1.75 41.91 1.94
200 208 8.419076 TTTTGAGGCAAAAAGATAAAACACTC 57.581 30.769 3.09 0.00 39.85 3.51
231 239 3.004752 AGTCACATCCAAATGCTACCC 57.995 47.619 0.00 0.00 36.26 3.69
332 340 4.645588 TGTTAACCGGAAAGTCAATTTGGT 59.354 37.500 9.46 0.00 30.42 3.67
602 618 5.768164 TGAGATTTTGGAGGAAGTTGTAACC 59.232 40.000 0.00 0.00 0.00 2.85
603 619 6.877611 TGAGATTTTGGAGGAAGTTGTAAC 57.122 37.500 0.00 0.00 0.00 2.50
604 620 7.060421 ACTTGAGATTTTGGAGGAAGTTGTAA 58.940 34.615 0.00 0.00 0.00 2.41
605 621 6.601332 ACTTGAGATTTTGGAGGAAGTTGTA 58.399 36.000 0.00 0.00 0.00 2.41
606 622 5.449553 ACTTGAGATTTTGGAGGAAGTTGT 58.550 37.500 0.00 0.00 0.00 3.32
607 623 5.532406 TGACTTGAGATTTTGGAGGAAGTTG 59.468 40.000 0.00 0.00 0.00 3.16
608 624 5.532779 GTGACTTGAGATTTTGGAGGAAGTT 59.467 40.000 0.00 0.00 0.00 2.66
609 625 5.066593 GTGACTTGAGATTTTGGAGGAAGT 58.933 41.667 0.00 0.00 0.00 3.01
610 626 5.312079 AGTGACTTGAGATTTTGGAGGAAG 58.688 41.667 0.00 0.00 0.00 3.46
611 627 5.310409 AGTGACTTGAGATTTTGGAGGAA 57.690 39.130 0.00 0.00 0.00 3.36
612 628 4.982241 AGTGACTTGAGATTTTGGAGGA 57.018 40.909 0.00 0.00 0.00 3.71
613 629 5.641209 CACTAGTGACTTGAGATTTTGGAGG 59.359 44.000 18.45 0.00 0.00 4.30
614 630 5.121454 GCACTAGTGACTTGAGATTTTGGAG 59.879 44.000 27.08 0.00 0.00 3.86
615 631 4.997395 GCACTAGTGACTTGAGATTTTGGA 59.003 41.667 27.08 0.00 0.00 3.53
616 632 4.756642 TGCACTAGTGACTTGAGATTTTGG 59.243 41.667 27.08 0.00 0.00 3.28
617 633 5.237127 TGTGCACTAGTGACTTGAGATTTTG 59.763 40.000 27.08 0.00 0.00 2.44
618 634 5.368145 TGTGCACTAGTGACTTGAGATTTT 58.632 37.500 27.08 0.00 0.00 1.82
619 635 4.960938 TGTGCACTAGTGACTTGAGATTT 58.039 39.130 27.08 0.00 0.00 2.17
620 636 4.607293 TGTGCACTAGTGACTTGAGATT 57.393 40.909 27.08 0.00 0.00 2.40
621 637 4.502016 CATGTGCACTAGTGACTTGAGAT 58.498 43.478 27.08 7.91 0.00 2.75
622 638 3.862264 GCATGTGCACTAGTGACTTGAGA 60.862 47.826 27.08 6.08 41.59 3.27
623 639 2.414481 GCATGTGCACTAGTGACTTGAG 59.586 50.000 27.08 11.44 41.59 3.02
624 640 2.416747 GCATGTGCACTAGTGACTTGA 58.583 47.619 27.08 5.10 41.59 3.02
625 641 2.888513 GCATGTGCACTAGTGACTTG 57.111 50.000 27.08 24.18 41.59 3.16
638 654 1.295357 TAAACCGAGGCGTGCATGTG 61.295 55.000 7.93 0.00 0.00 3.21
639 655 0.392461 ATAAACCGAGGCGTGCATGT 60.392 50.000 7.93 0.00 0.00 3.21
640 656 1.577468 TATAAACCGAGGCGTGCATG 58.423 50.000 0.09 0.09 0.00 4.06
641 657 2.319136 TTATAAACCGAGGCGTGCAT 57.681 45.000 0.00 0.00 0.00 3.96
642 658 2.096220 TTTATAAACCGAGGCGTGCA 57.904 45.000 0.00 0.00 0.00 4.57
643 659 2.674357 TCTTTTATAAACCGAGGCGTGC 59.326 45.455 0.00 0.00 0.00 5.34
644 660 4.809426 AGATCTTTTATAAACCGAGGCGTG 59.191 41.667 0.00 0.00 0.00 5.34
645 661 4.809426 CAGATCTTTTATAAACCGAGGCGT 59.191 41.667 0.00 0.00 0.00 5.68
646 662 5.047847 TCAGATCTTTTATAAACCGAGGCG 58.952 41.667 0.00 0.00 0.00 5.52
647 663 5.050972 CGTCAGATCTTTTATAAACCGAGGC 60.051 44.000 0.00 0.00 0.00 4.70
648 664 6.040878 ACGTCAGATCTTTTATAAACCGAGG 58.959 40.000 0.00 0.00 0.00 4.63
649 665 7.513196 CGAACGTCAGATCTTTTATAAACCGAG 60.513 40.741 0.00 0.00 0.00 4.63
650 666 6.252015 CGAACGTCAGATCTTTTATAAACCGA 59.748 38.462 0.00 0.00 0.00 4.69
651 667 6.400422 CGAACGTCAGATCTTTTATAAACCG 58.600 40.000 0.00 0.00 0.00 4.44
652 668 6.183324 GCGAACGTCAGATCTTTTATAAACC 58.817 40.000 0.00 0.00 0.00 3.27
653 669 6.183324 GGCGAACGTCAGATCTTTTATAAAC 58.817 40.000 0.00 0.00 0.00 2.01
654 670 5.292589 GGGCGAACGTCAGATCTTTTATAAA 59.707 40.000 0.00 0.00 0.00 1.40
655 671 4.807304 GGGCGAACGTCAGATCTTTTATAA 59.193 41.667 0.00 0.00 0.00 0.98
656 672 4.142116 TGGGCGAACGTCAGATCTTTTATA 60.142 41.667 0.00 0.00 0.00 0.98
657 673 3.195661 GGGCGAACGTCAGATCTTTTAT 58.804 45.455 0.00 0.00 0.00 1.40
658 674 2.028839 TGGGCGAACGTCAGATCTTTTA 60.029 45.455 0.00 0.00 0.00 1.52
659 675 1.270625 TGGGCGAACGTCAGATCTTTT 60.271 47.619 0.00 0.00 0.00 2.27
660 676 0.320374 TGGGCGAACGTCAGATCTTT 59.680 50.000 0.00 0.00 0.00 2.52
661 677 0.537188 ATGGGCGAACGTCAGATCTT 59.463 50.000 0.00 0.00 0.00 2.40
662 678 0.537188 AATGGGCGAACGTCAGATCT 59.463 50.000 0.61 0.00 0.00 2.75
663 679 2.218953 TAATGGGCGAACGTCAGATC 57.781 50.000 0.61 0.00 0.00 2.75
664 680 2.910688 ATAATGGGCGAACGTCAGAT 57.089 45.000 0.61 0.00 0.00 2.90
665 681 3.804786 TTATAATGGGCGAACGTCAGA 57.195 42.857 0.61 0.00 0.00 3.27
666 682 5.418310 AAATTATAATGGGCGAACGTCAG 57.582 39.130 0.00 0.00 0.00 3.51
667 683 5.587043 AGAAAATTATAATGGGCGAACGTCA 59.413 36.000 0.00 0.00 0.00 4.35
668 684 6.056428 AGAAAATTATAATGGGCGAACGTC 57.944 37.500 0.00 0.00 0.00 4.34
669 685 6.445357 AAGAAAATTATAATGGGCGAACGT 57.555 33.333 0.00 0.00 0.00 3.99
670 686 8.844441 TTTAAGAAAATTATAATGGGCGAACG 57.156 30.769 0.00 0.00 0.00 3.95
673 689 9.796120 CAGTTTTAAGAAAATTATAATGGGCGA 57.204 29.630 0.00 0.00 32.22 5.54
674 690 9.796120 TCAGTTTTAAGAAAATTATAATGGGCG 57.204 29.630 0.00 0.00 32.22 6.13
690 706 9.334693 GCTAAGTTGTCAATGATCAGTTTTAAG 57.665 33.333 0.09 0.00 0.00 1.85
691 707 9.066892 AGCTAAGTTGTCAATGATCAGTTTTAA 57.933 29.630 0.09 0.00 0.00 1.52
692 708 8.621532 AGCTAAGTTGTCAATGATCAGTTTTA 57.378 30.769 0.09 0.00 0.00 1.52
693 709 7.516198 AGCTAAGTTGTCAATGATCAGTTTT 57.484 32.000 0.09 0.00 0.00 2.43
694 710 8.798859 ATAGCTAAGTTGTCAATGATCAGTTT 57.201 30.769 0.09 0.00 0.00 2.66
695 711 8.798859 AATAGCTAAGTTGTCAATGATCAGTT 57.201 30.769 0.09 0.00 0.00 3.16
696 712 8.671921 CAAATAGCTAAGTTGTCAATGATCAGT 58.328 33.333 0.09 0.00 0.00 3.41
697 713 7.642978 GCAAATAGCTAAGTTGTCAATGATCAG 59.357 37.037 17.28 0.00 41.15 2.90
698 714 7.121020 TGCAAATAGCTAAGTTGTCAATGATCA 59.879 33.333 17.28 0.00 45.94 2.92
699 715 7.430502 GTGCAAATAGCTAAGTTGTCAATGATC 59.569 37.037 17.28 0.00 45.94 2.92
700 716 7.121759 AGTGCAAATAGCTAAGTTGTCAATGAT 59.878 33.333 17.28 5.61 45.94 2.45
701 717 6.430925 AGTGCAAATAGCTAAGTTGTCAATGA 59.569 34.615 17.28 0.00 45.94 2.57
702 718 6.615088 AGTGCAAATAGCTAAGTTGTCAATG 58.385 36.000 17.28 0.00 45.94 2.82
703 719 6.127897 GGAGTGCAAATAGCTAAGTTGTCAAT 60.128 38.462 17.28 14.86 45.94 2.57
704 720 5.181245 GGAGTGCAAATAGCTAAGTTGTCAA 59.819 40.000 17.28 5.86 45.94 3.18
705 721 4.695455 GGAGTGCAAATAGCTAAGTTGTCA 59.305 41.667 17.28 13.73 45.94 3.58
706 722 4.938226 AGGAGTGCAAATAGCTAAGTTGTC 59.062 41.667 17.28 12.03 45.94 3.18
707 723 4.911390 AGGAGTGCAAATAGCTAAGTTGT 58.089 39.130 17.28 3.30 45.94 3.32
708 724 4.033358 CGAGGAGTGCAAATAGCTAAGTTG 59.967 45.833 13.59 13.59 45.94 3.16
709 725 4.184629 CGAGGAGTGCAAATAGCTAAGTT 58.815 43.478 0.00 0.00 45.94 2.66
710 726 3.430929 CCGAGGAGTGCAAATAGCTAAGT 60.431 47.826 0.00 0.00 45.94 2.24
711 727 3.126831 CCGAGGAGTGCAAATAGCTAAG 58.873 50.000 0.00 0.00 45.94 2.18
712 728 2.500098 ACCGAGGAGTGCAAATAGCTAA 59.500 45.455 0.00 0.00 45.94 3.09
713 729 2.108168 ACCGAGGAGTGCAAATAGCTA 58.892 47.619 0.00 0.00 45.94 3.32
714 730 0.905357 ACCGAGGAGTGCAAATAGCT 59.095 50.000 0.00 0.00 45.94 3.32
715 731 1.739067 AACCGAGGAGTGCAAATAGC 58.261 50.000 0.00 0.00 45.96 2.97
716 732 5.116180 TCATAAACCGAGGAGTGCAAATAG 58.884 41.667 0.00 0.00 0.00 1.73
717 733 5.092554 TCATAAACCGAGGAGTGCAAATA 57.907 39.130 0.00 0.00 0.00 1.40
718 734 3.950397 TCATAAACCGAGGAGTGCAAAT 58.050 40.909 0.00 0.00 0.00 2.32
719 735 3.410631 TCATAAACCGAGGAGTGCAAA 57.589 42.857 0.00 0.00 0.00 3.68
720 736 3.410631 TTCATAAACCGAGGAGTGCAA 57.589 42.857 0.00 0.00 0.00 4.08
721 737 3.410631 TTTCATAAACCGAGGAGTGCA 57.589 42.857 0.00 0.00 0.00 4.57
722 738 3.424433 CGTTTTCATAAACCGAGGAGTGC 60.424 47.826 0.00 0.00 40.42 4.40
723 739 3.991773 TCGTTTTCATAAACCGAGGAGTG 59.008 43.478 0.00 0.00 40.42 3.51
724 740 4.243270 CTCGTTTTCATAAACCGAGGAGT 58.757 43.478 10.39 0.00 40.42 3.85
725 741 4.091509 CACTCGTTTTCATAAACCGAGGAG 59.908 45.833 19.03 10.32 42.47 3.69
726 742 3.991773 CACTCGTTTTCATAAACCGAGGA 59.008 43.478 19.03 0.88 42.47 3.71
727 743 3.991773 TCACTCGTTTTCATAAACCGAGG 59.008 43.478 19.03 10.82 42.47 4.63
728 744 5.779806 ATCACTCGTTTTCATAAACCGAG 57.220 39.130 15.03 15.03 43.06 4.63
729 745 6.311935 CCTTATCACTCGTTTTCATAAACCGA 59.688 38.462 0.00 0.00 40.42 4.69
730 746 6.311935 TCCTTATCACTCGTTTTCATAAACCG 59.688 38.462 0.00 0.00 40.42 4.44
731 747 7.605410 TCCTTATCACTCGTTTTCATAAACC 57.395 36.000 0.00 0.00 40.42 3.27
733 749 9.321562 GGTATCCTTATCACTCGTTTTCATAAA 57.678 33.333 0.00 0.00 0.00 1.40
734 750 7.650504 CGGTATCCTTATCACTCGTTTTCATAA 59.349 37.037 0.00 0.00 0.00 1.90
735 751 7.143340 CGGTATCCTTATCACTCGTTTTCATA 58.857 38.462 0.00 0.00 0.00 2.15
736 752 5.983720 CGGTATCCTTATCACTCGTTTTCAT 59.016 40.000 0.00 0.00 0.00 2.57
737 753 5.345702 CGGTATCCTTATCACTCGTTTTCA 58.654 41.667 0.00 0.00 0.00 2.69
738 754 4.208666 GCGGTATCCTTATCACTCGTTTTC 59.791 45.833 0.00 0.00 0.00 2.29
739 755 4.117685 GCGGTATCCTTATCACTCGTTTT 58.882 43.478 0.00 0.00 0.00 2.43
740 756 3.492137 GGCGGTATCCTTATCACTCGTTT 60.492 47.826 0.00 0.00 0.00 3.60
741 757 2.035576 GGCGGTATCCTTATCACTCGTT 59.964 50.000 0.00 0.00 0.00 3.85
742 758 1.612463 GGCGGTATCCTTATCACTCGT 59.388 52.381 0.00 0.00 0.00 4.18
743 759 1.887198 AGGCGGTATCCTTATCACTCG 59.113 52.381 0.00 0.00 30.82 4.18
744 760 3.193056 GGTAGGCGGTATCCTTATCACTC 59.807 52.174 0.00 0.00 37.66 3.51
745 761 3.163467 GGTAGGCGGTATCCTTATCACT 58.837 50.000 0.00 0.00 37.66 3.41
746 762 2.233186 GGGTAGGCGGTATCCTTATCAC 59.767 54.545 0.00 0.00 37.66 3.06
747 763 2.532843 GGGTAGGCGGTATCCTTATCA 58.467 52.381 0.00 0.00 37.66 2.15
748 764 1.475682 CGGGTAGGCGGTATCCTTATC 59.524 57.143 0.00 0.00 37.66 1.75
749 765 1.203100 ACGGGTAGGCGGTATCCTTAT 60.203 52.381 0.00 0.00 37.66 1.73
750 766 0.185901 ACGGGTAGGCGGTATCCTTA 59.814 55.000 0.00 0.00 37.66 2.69
751 767 1.075748 ACGGGTAGGCGGTATCCTT 60.076 57.895 0.00 0.00 37.66 3.36
752 768 1.831286 CACGGGTAGGCGGTATCCT 60.831 63.158 0.00 0.00 40.21 3.24
753 769 2.732658 CACGGGTAGGCGGTATCC 59.267 66.667 0.00 0.00 0.00 2.59
754 770 0.823356 TACCACGGGTAGGCGGTATC 60.823 60.000 0.00 0.00 37.09 2.24
755 771 0.396974 TTACCACGGGTAGGCGGTAT 60.397 55.000 3.49 0.00 39.52 2.73
756 772 1.000270 TTACCACGGGTAGGCGGTA 60.000 57.895 3.49 0.00 39.52 4.02
757 773 2.283821 TTACCACGGGTAGGCGGT 60.284 61.111 3.49 0.00 39.52 5.68
758 774 2.169937 TTGTTACCACGGGTAGGCGG 62.170 60.000 3.49 0.00 39.52 6.13
759 775 0.108041 ATTGTTACCACGGGTAGGCG 60.108 55.000 3.49 0.00 39.52 5.52
760 776 2.118313 AATTGTTACCACGGGTAGGC 57.882 50.000 3.49 2.79 39.52 3.93
761 777 3.946606 AGAAATTGTTACCACGGGTAGG 58.053 45.455 3.49 0.00 39.52 3.18
762 778 7.225341 GGTATTAGAAATTGTTACCACGGGTAG 59.775 40.741 3.49 0.00 39.52 3.18
763 779 7.047271 GGTATTAGAAATTGTTACCACGGGTA 58.953 38.462 0.00 0.00 37.09 3.69
764 780 5.882000 GGTATTAGAAATTGTTACCACGGGT 59.118 40.000 1.14 1.14 40.16 5.28
765 781 6.117488 AGGTATTAGAAATTGTTACCACGGG 58.883 40.000 0.00 0.00 35.76 5.28
766 782 6.819649 TGAGGTATTAGAAATTGTTACCACGG 59.180 38.462 0.00 0.00 35.76 4.94
767 783 7.837202 TGAGGTATTAGAAATTGTTACCACG 57.163 36.000 0.00 0.00 35.76 4.94
768 784 9.174166 ACATGAGGTATTAGAAATTGTTACCAC 57.826 33.333 0.00 0.00 35.76 4.16
769 785 9.747898 AACATGAGGTATTAGAAATTGTTACCA 57.252 29.630 0.00 0.00 35.76 3.25
771 787 9.916397 CGAACATGAGGTATTAGAAATTGTTAC 57.084 33.333 0.00 0.00 0.00 2.50
772 788 9.878667 TCGAACATGAGGTATTAGAAATTGTTA 57.121 29.630 0.00 0.00 0.00 2.41
773 789 8.786826 TCGAACATGAGGTATTAGAAATTGTT 57.213 30.769 0.00 0.00 0.00 2.83
774 790 8.665685 GTTCGAACATGAGGTATTAGAAATTGT 58.334 33.333 23.12 0.00 0.00 2.71
775 791 7.846107 CGTTCGAACATGAGGTATTAGAAATTG 59.154 37.037 26.71 0.98 0.00 2.32
776 792 7.548075 ACGTTCGAACATGAGGTATTAGAAATT 59.452 33.333 26.71 0.00 0.00 1.82
777 793 7.010183 CACGTTCGAACATGAGGTATTAGAAAT 59.990 37.037 26.71 0.00 0.00 2.17
778 794 6.309494 CACGTTCGAACATGAGGTATTAGAAA 59.691 38.462 26.71 0.00 0.00 2.52
779 795 5.803461 CACGTTCGAACATGAGGTATTAGAA 59.197 40.000 26.71 0.00 0.00 2.10
780 796 5.337554 CACGTTCGAACATGAGGTATTAGA 58.662 41.667 26.71 0.00 0.00 2.10
781 797 4.026804 GCACGTTCGAACATGAGGTATTAG 60.027 45.833 26.95 8.94 0.00 1.73
782 798 3.861113 GCACGTTCGAACATGAGGTATTA 59.139 43.478 26.95 0.00 0.00 0.98
783 799 2.671396 GCACGTTCGAACATGAGGTATT 59.329 45.455 26.95 0.00 0.00 1.89
784 800 2.268298 GCACGTTCGAACATGAGGTAT 58.732 47.619 26.95 0.00 0.00 2.73
785 801 1.670674 GGCACGTTCGAACATGAGGTA 60.671 52.381 26.95 0.00 0.00 3.08
786 802 0.949105 GGCACGTTCGAACATGAGGT 60.949 55.000 26.95 13.59 0.00 3.85
787 803 1.635663 GGGCACGTTCGAACATGAGG 61.636 60.000 26.95 12.94 0.00 3.86
788 804 0.948623 TGGGCACGTTCGAACATGAG 60.949 55.000 26.95 13.30 0.00 2.90
789 805 0.321210 ATGGGCACGTTCGAACATGA 60.321 50.000 26.95 7.60 0.00 3.07
790 806 1.364721 TATGGGCACGTTCGAACATG 58.635 50.000 26.71 23.19 0.00 3.21
791 807 2.006888 CTTATGGGCACGTTCGAACAT 58.993 47.619 26.71 10.48 0.00 2.71
792 808 1.270412 ACTTATGGGCACGTTCGAACA 60.270 47.619 26.71 7.70 0.00 3.18
793 809 1.435577 ACTTATGGGCACGTTCGAAC 58.564 50.000 18.47 18.47 0.00 3.95
794 810 3.316071 TTACTTATGGGCACGTTCGAA 57.684 42.857 0.00 0.00 0.00 3.71
795 811 3.450578 GATTACTTATGGGCACGTTCGA 58.549 45.455 0.00 0.00 0.00 3.71
796 812 2.542595 GGATTACTTATGGGCACGTTCG 59.457 50.000 0.00 0.00 0.00 3.95
797 813 3.805207 AGGATTACTTATGGGCACGTTC 58.195 45.455 0.00 0.00 0.00 3.95
798 814 3.454812 AGAGGATTACTTATGGGCACGTT 59.545 43.478 0.00 0.00 0.00 3.99
799 815 3.039011 AGAGGATTACTTATGGGCACGT 58.961 45.455 0.00 0.00 0.00 4.49
800 816 3.555168 GGAGAGGATTACTTATGGGCACG 60.555 52.174 0.00 0.00 0.00 5.34
801 817 3.555168 CGGAGAGGATTACTTATGGGCAC 60.555 52.174 0.00 0.00 0.00 5.01
802 818 2.632996 CGGAGAGGATTACTTATGGGCA 59.367 50.000 0.00 0.00 0.00 5.36
803 819 2.633481 ACGGAGAGGATTACTTATGGGC 59.367 50.000 0.00 0.00 0.00 5.36
804 820 5.279356 GGTTACGGAGAGGATTACTTATGGG 60.279 48.000 0.00 0.00 0.00 4.00
805 821 5.303589 TGGTTACGGAGAGGATTACTTATGG 59.696 44.000 0.00 0.00 0.00 2.74
806 822 6.401047 TGGTTACGGAGAGGATTACTTATG 57.599 41.667 0.00 0.00 0.00 1.90
807 823 7.289317 TGATTGGTTACGGAGAGGATTACTTAT 59.711 37.037 0.00 0.00 0.00 1.73
808 824 6.608405 TGATTGGTTACGGAGAGGATTACTTA 59.392 38.462 0.00 0.00 0.00 2.24
809 825 5.424252 TGATTGGTTACGGAGAGGATTACTT 59.576 40.000 0.00 0.00 0.00 2.24
810 826 4.960469 TGATTGGTTACGGAGAGGATTACT 59.040 41.667 0.00 0.00 0.00 2.24
811 827 5.272283 TGATTGGTTACGGAGAGGATTAC 57.728 43.478 0.00 0.00 0.00 1.89
821 837 4.258543 ACCAGTTACATGATTGGTTACGG 58.741 43.478 0.00 0.00 40.94 4.02
906 3859 0.981183 TAGCGAAGGGTGGTGACAAT 59.019 50.000 0.00 0.00 46.06 2.71
1099 4055 1.004394 GGTCAAGAACTCCGGGGATTT 59.996 52.381 9.33 0.00 0.00 2.17
1107 4063 2.143925 CCGTTGAAGGTCAAGAACTCC 58.856 52.381 0.00 0.00 37.00 3.85
1363 4319 0.981183 TAGTTGACGAACCCCATGCT 59.019 50.000 0.00 0.00 31.81 3.79
1476 4432 4.284490 ACCTGCATGACGGATAGATTGTAT 59.716 41.667 0.00 0.00 0.00 2.29
1503 4459 0.527113 TTGGTGGAATGATTGCTGCG 59.473 50.000 0.00 0.00 0.00 5.18
1647 4603 1.018148 CAGGAGCGTCATCGTCTAGT 58.982 55.000 0.00 0.00 39.49 2.57
1773 4729 7.598278 TGTGCGTAGAATTTTAAACCATCAAT 58.402 30.769 0.00 0.00 0.00 2.57
1896 5067 4.371624 AGGGCATCCATCGAATGAATTA 57.628 40.909 0.00 0.00 34.83 1.40
1897 5068 3.234234 AGGGCATCCATCGAATGAATT 57.766 42.857 0.00 0.00 34.83 2.17
1902 5073 2.158564 ACATCAAGGGCATCCATCGAAT 60.159 45.455 0.00 0.00 34.83 3.34
1978 5149 3.709653 TCAATGTCAGTAGGGATGGGTAC 59.290 47.826 0.00 0.00 0.00 3.34
1979 5150 3.709653 GTCAATGTCAGTAGGGATGGGTA 59.290 47.826 0.00 0.00 0.00 3.69
2011 5183 0.237498 GCGTTTTCTTGGGTCCTTCG 59.763 55.000 0.00 0.00 0.00 3.79
2018 5190 1.826385 AGATCAGGCGTTTTCTTGGG 58.174 50.000 0.00 0.00 0.00 4.12
2100 5272 1.539827 GAACGGGCACAAACAATAGCT 59.460 47.619 0.00 0.00 0.00 3.32
2154 5333 2.107950 TCTGGAGTGCGGGTTAATTG 57.892 50.000 0.00 0.00 0.00 2.32
2163 5342 2.712057 AAAAGCAAATCTGGAGTGCG 57.288 45.000 0.00 0.00 43.16 5.34
2164 5343 4.670221 CGAGTAAAAGCAAATCTGGAGTGC 60.670 45.833 0.00 0.00 38.59 4.40
2181 5360 3.810373 GTACGAAGAAACGGACGAGTAA 58.190 45.455 0.00 0.00 37.37 2.24
2183 5362 2.322371 GTACGAAGAAACGGACGAGT 57.678 50.000 0.00 0.00 37.37 4.18
2276 5455 9.705103 TTTTCTAGGCTACCTTGATTAGTAGTA 57.295 33.333 0.00 0.00 38.57 1.82
2281 5460 7.927092 GGTACTTTTCTAGGCTACCTTGATTAG 59.073 40.741 0.00 3.03 35.55 1.73
2301 5480 4.032960 TCAATGGAGCAATGTGGTACTT 57.967 40.909 0.00 0.00 28.14 2.24
2311 5490 4.439153 GCGAGAAATCATTCAATGGAGCAA 60.439 41.667 0.00 0.00 38.06 3.91
2369 5548 0.391228 TGTGTGCTCGTTGCTCCTTA 59.609 50.000 5.00 0.00 43.37 2.69
2372 5551 2.939022 GTGTGTGCTCGTTGCTCC 59.061 61.111 5.00 0.00 43.37 4.70
2375 5554 2.546321 CTCGTGTGTGCTCGTTGC 59.454 61.111 0.00 0.00 43.25 4.17
2378 5557 2.335369 GTCCTCGTGTGTGCTCGT 59.665 61.111 0.00 0.00 33.82 4.18
2379 5558 2.801162 CGTCCTCGTGTGTGCTCG 60.801 66.667 0.00 0.00 0.00 5.03
2400 5579 3.330720 AGCTAGCCCGCCCTGTTT 61.331 61.111 12.13 0.00 0.00 2.83
2401 5580 4.101448 CAGCTAGCCCGCCCTGTT 62.101 66.667 12.13 0.00 0.00 3.16
2415 5594 0.671781 CTCTACACACCAGCACCAGC 60.672 60.000 0.00 0.00 42.56 4.85
2416 5595 0.969149 TCTCTACACACCAGCACCAG 59.031 55.000 0.00 0.00 0.00 4.00
2417 5596 0.969149 CTCTCTACACACCAGCACCA 59.031 55.000 0.00 0.00 0.00 4.17
2418 5597 0.247736 CCTCTCTACACACCAGCACC 59.752 60.000 0.00 0.00 0.00 5.01
2419 5598 0.390472 GCCTCTCTACACACCAGCAC 60.390 60.000 0.00 0.00 0.00 4.40
2420 5599 0.831711 TGCCTCTCTACACACCAGCA 60.832 55.000 0.00 0.00 0.00 4.41
2421 5600 0.321671 TTGCCTCTCTACACACCAGC 59.678 55.000 0.00 0.00 0.00 4.85
2422 5601 1.066573 CCTTGCCTCTCTACACACCAG 60.067 57.143 0.00 0.00 0.00 4.00
2423 5602 0.976641 CCTTGCCTCTCTACACACCA 59.023 55.000 0.00 0.00 0.00 4.17
2424 5603 1.205893 CTCCTTGCCTCTCTACACACC 59.794 57.143 0.00 0.00 0.00 4.16
2425 5604 1.205893 CCTCCTTGCCTCTCTACACAC 59.794 57.143 0.00 0.00 0.00 3.82
2426 5605 1.077169 TCCTCCTTGCCTCTCTACACA 59.923 52.381 0.00 0.00 0.00 3.72
2427 5606 1.754226 CTCCTCCTTGCCTCTCTACAC 59.246 57.143 0.00 0.00 0.00 2.90
2428 5607 1.342474 CCTCCTCCTTGCCTCTCTACA 60.342 57.143 0.00 0.00 0.00 2.74
2429 5608 1.408969 CCTCCTCCTTGCCTCTCTAC 58.591 60.000 0.00 0.00 0.00 2.59
2430 5609 0.397816 GCCTCCTCCTTGCCTCTCTA 60.398 60.000 0.00 0.00 0.00 2.43
2431 5610 1.688884 GCCTCCTCCTTGCCTCTCT 60.689 63.158 0.00 0.00 0.00 3.10
2432 5611 0.397816 TAGCCTCCTCCTTGCCTCTC 60.398 60.000 0.00 0.00 0.00 3.20
2433 5612 0.398381 CTAGCCTCCTCCTTGCCTCT 60.398 60.000 0.00 0.00 0.00 3.69
2434 5613 2.038814 GCTAGCCTCCTCCTTGCCTC 62.039 65.000 2.29 0.00 0.00 4.70
2435 5614 2.069430 GCTAGCCTCCTCCTTGCCT 61.069 63.158 2.29 0.00 0.00 4.75
2436 5615 2.322638 CTGCTAGCCTCCTCCTTGCC 62.323 65.000 13.29 0.00 31.49 4.52
2437 5616 1.145819 CTGCTAGCCTCCTCCTTGC 59.854 63.158 13.29 0.00 0.00 4.01
2438 5617 0.177604 CACTGCTAGCCTCCTCCTTG 59.822 60.000 13.29 0.00 0.00 3.61
2439 5618 0.041833 TCACTGCTAGCCTCCTCCTT 59.958 55.000 13.29 0.00 0.00 3.36
2440 5619 0.264359 ATCACTGCTAGCCTCCTCCT 59.736 55.000 13.29 0.00 0.00 3.69
2441 5620 0.392336 CATCACTGCTAGCCTCCTCC 59.608 60.000 13.29 0.00 0.00 4.30
2442 5621 1.340889 CTCATCACTGCTAGCCTCCTC 59.659 57.143 13.29 0.00 0.00 3.71
2443 5622 1.412079 CTCATCACTGCTAGCCTCCT 58.588 55.000 13.29 0.00 0.00 3.69
2444 5623 0.392336 CCTCATCACTGCTAGCCTCC 59.608 60.000 13.29 0.00 0.00 4.30
2445 5624 0.392336 CCCTCATCACTGCTAGCCTC 59.608 60.000 13.29 0.00 0.00 4.70
2446 5625 0.031716 TCCCTCATCACTGCTAGCCT 60.032 55.000 13.29 0.00 0.00 4.58
2447 5626 0.392336 CTCCCTCATCACTGCTAGCC 59.608 60.000 13.29 0.00 0.00 3.93
2448 5627 0.392336 CCTCCCTCATCACTGCTAGC 59.608 60.000 8.10 8.10 0.00 3.42
2449 5628 0.392336 GCCTCCCTCATCACTGCTAG 59.608 60.000 0.00 0.00 0.00 3.42
2450 5629 1.050988 GGCCTCCCTCATCACTGCTA 61.051 60.000 0.00 0.00 0.00 3.49
2451 5630 2.373707 GGCCTCCCTCATCACTGCT 61.374 63.158 0.00 0.00 0.00 4.24
2452 5631 1.992519 ATGGCCTCCCTCATCACTGC 61.993 60.000 3.32 0.00 0.00 4.40
2453 5632 0.179026 CATGGCCTCCCTCATCACTG 60.179 60.000 3.32 0.00 0.00 3.66
2454 5633 1.351080 CCATGGCCTCCCTCATCACT 61.351 60.000 3.32 0.00 0.00 3.41
2455 5634 1.150081 CCATGGCCTCCCTCATCAC 59.850 63.158 3.32 0.00 0.00 3.06
2456 5635 2.760378 GCCATGGCCTCCCTCATCA 61.760 63.158 27.24 0.00 34.56 3.07
2457 5636 2.114838 GCCATGGCCTCCCTCATC 59.885 66.667 27.24 0.00 34.56 2.92
2458 5637 2.697263 TGCCATGGCCTCCCTCAT 60.697 61.111 33.44 0.00 41.09 2.90
2459 5638 3.414193 CTGCCATGGCCTCCCTCA 61.414 66.667 33.44 12.43 41.09 3.86
2460 5639 3.092511 TCTGCCATGGCCTCCCTC 61.093 66.667 33.44 5.22 41.09 4.30
2461 5640 2.551856 TACTCTGCCATGGCCTCCCT 62.552 60.000 33.44 14.43 41.09 4.20
2462 5641 2.049627 CTACTCTGCCATGGCCTCCC 62.050 65.000 33.44 6.83 41.09 4.30
2463 5642 1.449353 CTACTCTGCCATGGCCTCC 59.551 63.158 33.44 7.24 41.09 4.30
2464 5643 1.341156 ACCTACTCTGCCATGGCCTC 61.341 60.000 33.44 7.65 41.09 4.70
2465 5644 0.031111 TACCTACTCTGCCATGGCCT 60.031 55.000 33.44 15.50 41.09 5.19
2466 5645 0.394565 CTACCTACTCTGCCATGGCC 59.605 60.000 33.44 16.23 41.09 5.36
2467 5646 0.250081 GCTACCTACTCTGCCATGGC 60.250 60.000 30.54 30.54 42.35 4.40
2468 5647 0.032678 CGCTACCTACTCTGCCATGG 59.967 60.000 7.63 7.63 0.00 3.66
2469 5648 0.032678 CCGCTACCTACTCTGCCATG 59.967 60.000 0.00 0.00 0.00 3.66
2470 5649 0.106167 TCCGCTACCTACTCTGCCAT 60.106 55.000 0.00 0.00 0.00 4.40
2471 5650 1.035932 GTCCGCTACCTACTCTGCCA 61.036 60.000 0.00 0.00 0.00 4.92
2472 5651 1.734748 GTCCGCTACCTACTCTGCC 59.265 63.158 0.00 0.00 0.00 4.85
2473 5652 1.355916 CGTCCGCTACCTACTCTGC 59.644 63.158 0.00 0.00 0.00 4.26
2474 5653 1.355916 GCGTCCGCTACCTACTCTG 59.644 63.158 4.10 0.00 38.26 3.35
2475 5654 3.824810 GCGTCCGCTACCTACTCT 58.175 61.111 4.10 0.00 38.26 3.24
2485 5664 2.279517 CTATGGGTCAGCGTCCGC 60.280 66.667 2.94 2.94 42.33 5.54
2486 5665 2.279517 GCTATGGGTCAGCGTCCG 60.280 66.667 0.00 0.00 0.00 4.79
2487 5666 2.109181 GGCTATGGGTCAGCGTCC 59.891 66.667 0.00 0.00 40.05 4.79
2488 5667 1.227380 CTGGCTATGGGTCAGCGTC 60.227 63.158 0.00 0.00 40.98 5.19
2489 5668 2.903357 CTGGCTATGGGTCAGCGT 59.097 61.111 0.00 0.00 40.98 5.07
2493 5672 0.543277 CTTCTGCTGGCTATGGGTCA 59.457 55.000 0.00 0.00 0.00 4.02
2494 5673 0.833287 TCTTCTGCTGGCTATGGGTC 59.167 55.000 0.00 0.00 0.00 4.46
2495 5674 0.543749 GTCTTCTGCTGGCTATGGGT 59.456 55.000 0.00 0.00 0.00 4.51
2496 5675 0.531532 CGTCTTCTGCTGGCTATGGG 60.532 60.000 0.00 0.00 0.00 4.00
2497 5676 0.531532 CCGTCTTCTGCTGGCTATGG 60.532 60.000 0.00 0.00 0.00 2.74
2498 5677 1.156645 GCCGTCTTCTGCTGGCTATG 61.157 60.000 0.00 0.00 44.16 2.23
2499 5678 1.144936 GCCGTCTTCTGCTGGCTAT 59.855 57.895 0.00 0.00 44.16 2.97
2500 5679 2.579201 GCCGTCTTCTGCTGGCTA 59.421 61.111 0.00 0.00 44.16 3.93
2503 5682 1.739562 GTCTGCCGTCTTCTGCTGG 60.740 63.158 0.00 0.00 0.00 4.85
2504 5683 2.091112 CGTCTGCCGTCTTCTGCTG 61.091 63.158 0.00 0.00 0.00 4.41
2505 5684 2.259818 CGTCTGCCGTCTTCTGCT 59.740 61.111 0.00 0.00 0.00 4.24
2514 5693 4.334443 CAAAAATGATAAGACGTCTGCCG 58.666 43.478 20.85 0.00 44.03 5.69
2515 5694 4.394920 TCCAAAAATGATAAGACGTCTGCC 59.605 41.667 20.85 11.66 0.00 4.85
2516 5695 5.545658 TCCAAAAATGATAAGACGTCTGC 57.454 39.130 20.85 12.31 0.00 4.26
2517 5696 7.076842 ACATCCAAAAATGATAAGACGTCTG 57.923 36.000 20.85 3.74 0.00 3.51
2518 5697 7.687941 AACATCCAAAAATGATAAGACGTCT 57.312 32.000 13.58 13.58 0.00 4.18
2519 5698 8.742554 AAAACATCCAAAAATGATAAGACGTC 57.257 30.769 7.70 7.70 0.00 4.34
2520 5699 9.620660 GTAAAACATCCAAAAATGATAAGACGT 57.379 29.630 0.00 0.00 0.00 4.34
2521 5700 9.619316 TGTAAAACATCCAAAAATGATAAGACG 57.381 29.630 0.00 0.00 0.00 4.18
2588 5767 1.273606 CACTGGGCCCTATGTCGATAG 59.726 57.143 25.70 11.12 32.55 2.08
2589 5768 1.338107 CACTGGGCCCTATGTCGATA 58.662 55.000 25.70 0.00 0.00 2.92
2590 5769 2.044806 GCACTGGGCCCTATGTCGAT 62.045 60.000 25.70 0.00 36.11 3.59
2591 5770 2.731571 GCACTGGGCCCTATGTCGA 61.732 63.158 25.70 0.00 36.11 4.20
2592 5771 2.203070 GCACTGGGCCCTATGTCG 60.203 66.667 25.70 13.84 36.11 4.35
2601 5780 1.675720 AACAACAAGTGGCACTGGGC 61.676 55.000 25.24 0.00 43.74 5.36
2602 5781 0.823460 AAACAACAAGTGGCACTGGG 59.177 50.000 25.24 20.07 0.00 4.45
2603 5782 2.671130 AAAACAACAAGTGGCACTGG 57.329 45.000 22.83 21.59 0.00 4.00
2620 5799 8.353684 TGGTATTGATTTTCTGCGAAGTAAAAA 58.646 29.630 0.00 0.00 0.00 1.94
2621 5800 7.877003 TGGTATTGATTTTCTGCGAAGTAAAA 58.123 30.769 0.00 1.84 0.00 1.52
2622 5801 7.441890 TGGTATTGATTTTCTGCGAAGTAAA 57.558 32.000 0.00 0.00 0.00 2.01
2623 5802 7.441890 TTGGTATTGATTTTCTGCGAAGTAA 57.558 32.000 0.00 0.00 0.00 2.24
2624 5803 7.441890 TTTGGTATTGATTTTCTGCGAAGTA 57.558 32.000 0.00 0.00 0.00 2.24
2625 5804 5.957842 TTGGTATTGATTTTCTGCGAAGT 57.042 34.783 0.00 0.00 0.00 3.01
2626 5805 6.254157 CCATTTGGTATTGATTTTCTGCGAAG 59.746 38.462 0.00 0.00 0.00 3.79
2627 5806 6.071672 TCCATTTGGTATTGATTTTCTGCGAA 60.072 34.615 0.00 0.00 36.34 4.70
2628 5807 5.417266 TCCATTTGGTATTGATTTTCTGCGA 59.583 36.000 0.00 0.00 36.34 5.10
2629 5808 5.649557 TCCATTTGGTATTGATTTTCTGCG 58.350 37.500 0.00 0.00 36.34 5.18
2630 5809 6.633856 ACTCCATTTGGTATTGATTTTCTGC 58.366 36.000 0.00 0.00 36.34 4.26
2631 5810 7.093814 TGGACTCCATTTGGTATTGATTTTCTG 60.094 37.037 0.00 0.00 36.34 3.02
2632 5811 6.953520 TGGACTCCATTTGGTATTGATTTTCT 59.046 34.615 0.00 0.00 36.34 2.52
2633 5812 7.169158 TGGACTCCATTTGGTATTGATTTTC 57.831 36.000 0.00 0.00 36.34 2.29
2634 5813 7.552050 TTGGACTCCATTTGGTATTGATTTT 57.448 32.000 0.00 0.00 36.34 1.82
2635 5814 7.386059 GTTTGGACTCCATTTGGTATTGATTT 58.614 34.615 0.00 0.00 36.34 2.17
2636 5815 6.350110 CGTTTGGACTCCATTTGGTATTGATT 60.350 38.462 0.00 0.00 36.34 2.57
2637 5816 5.125417 CGTTTGGACTCCATTTGGTATTGAT 59.875 40.000 0.00 0.00 36.34 2.57
2638 5817 4.457603 CGTTTGGACTCCATTTGGTATTGA 59.542 41.667 0.00 0.00 36.34 2.57
2639 5818 4.732784 CGTTTGGACTCCATTTGGTATTG 58.267 43.478 0.00 0.00 36.34 1.90
2640 5819 3.192633 GCGTTTGGACTCCATTTGGTATT 59.807 43.478 0.00 0.00 36.34 1.89
2641 5820 2.752903 GCGTTTGGACTCCATTTGGTAT 59.247 45.455 0.00 0.00 36.34 2.73
2642 5821 2.156098 GCGTTTGGACTCCATTTGGTA 58.844 47.619 0.00 0.00 36.34 3.25
2643 5822 0.958822 GCGTTTGGACTCCATTTGGT 59.041 50.000 0.00 0.00 36.34 3.67
2644 5823 0.109781 CGCGTTTGGACTCCATTTGG 60.110 55.000 0.00 0.00 31.53 3.28
2645 5824 0.109781 CCGCGTTTGGACTCCATTTG 60.110 55.000 4.92 0.00 31.53 2.32
2646 5825 1.862602 GCCGCGTTTGGACTCCATTT 61.863 55.000 4.92 0.00 31.53 2.32
2647 5826 2.332654 GCCGCGTTTGGACTCCATT 61.333 57.895 4.92 0.00 31.53 3.16
2648 5827 2.746277 GCCGCGTTTGGACTCCAT 60.746 61.111 4.92 0.00 31.53 3.41
2651 5830 2.600475 TTTCGCCGCGTTTGGACTC 61.600 57.895 13.39 0.00 0.00 3.36
2652 5831 2.589442 TTTCGCCGCGTTTGGACT 60.589 55.556 13.39 0.00 0.00 3.85
2653 5832 2.383027 AAGTTTCGCCGCGTTTGGAC 62.383 55.000 13.39 5.77 0.00 4.02
2654 5833 1.716826 AAAGTTTCGCCGCGTTTGGA 61.717 50.000 13.39 0.00 0.00 3.53
2655 5834 0.868177 AAAAGTTTCGCCGCGTTTGG 60.868 50.000 13.39 0.00 0.00 3.28
2656 5835 0.917939 AAAAAGTTTCGCCGCGTTTG 59.082 45.000 13.39 0.00 0.00 2.93
2657 5836 0.917939 CAAAAAGTTTCGCCGCGTTT 59.082 45.000 13.39 2.87 0.00 3.60
2658 5837 0.868177 CCAAAAAGTTTCGCCGCGTT 60.868 50.000 13.39 0.00 0.00 4.84
2659 5838 1.298788 CCAAAAAGTTTCGCCGCGT 60.299 52.632 13.39 0.00 0.00 6.01
2660 5839 0.996727 CTCCAAAAAGTTTCGCCGCG 60.997 55.000 6.39 6.39 0.00 6.46
2661 5840 0.309612 TCTCCAAAAAGTTTCGCCGC 59.690 50.000 0.00 0.00 0.00 6.53
2662 5841 2.989422 ATCTCCAAAAAGTTTCGCCG 57.011 45.000 0.00 0.00 0.00 6.46
2663 5842 5.753438 AGAAAAATCTCCAAAAAGTTTCGCC 59.247 36.000 0.00 0.00 0.00 5.54
2664 5843 6.475402 TCAGAAAAATCTCCAAAAAGTTTCGC 59.525 34.615 0.00 0.00 0.00 4.70
2665 5844 7.985634 TCAGAAAAATCTCCAAAAAGTTTCG 57.014 32.000 0.00 0.00 0.00 3.46
2666 5845 8.604035 GGTTCAGAAAAATCTCCAAAAAGTTTC 58.396 33.333 0.00 0.00 0.00 2.78
2667 5846 8.100164 TGGTTCAGAAAAATCTCCAAAAAGTTT 58.900 29.630 0.00 0.00 0.00 2.66
2668 5847 7.619965 TGGTTCAGAAAAATCTCCAAAAAGTT 58.380 30.769 0.00 0.00 0.00 2.66
2669 5848 7.124147 TCTGGTTCAGAAAAATCTCCAAAAAGT 59.876 33.333 0.00 0.00 37.57 2.66
2670 5849 7.491682 TCTGGTTCAGAAAAATCTCCAAAAAG 58.508 34.615 0.00 0.00 37.57 2.27
2671 5850 7.416964 TCTGGTTCAGAAAAATCTCCAAAAA 57.583 32.000 0.00 0.00 37.57 1.94
2672 5851 7.416964 TTCTGGTTCAGAAAAATCTCCAAAA 57.583 32.000 7.77 0.00 45.84 2.44
2684 5863 5.532406 CCATCTTTTGTCTTCTGGTTCAGAA 59.468 40.000 9.60 9.60 46.50 3.02
2685 5864 5.065914 CCATCTTTTGTCTTCTGGTTCAGA 58.934 41.667 0.00 0.00 38.87 3.27
2686 5865 4.217118 CCCATCTTTTGTCTTCTGGTTCAG 59.783 45.833 0.00 0.00 0.00 3.02
2687 5866 4.144297 CCCATCTTTTGTCTTCTGGTTCA 58.856 43.478 0.00 0.00 0.00 3.18
2688 5867 3.057245 GCCCATCTTTTGTCTTCTGGTTC 60.057 47.826 0.00 0.00 0.00 3.62
2689 5868 2.893489 GCCCATCTTTTGTCTTCTGGTT 59.107 45.455 0.00 0.00 0.00 3.67
2690 5869 2.519013 GCCCATCTTTTGTCTTCTGGT 58.481 47.619 0.00 0.00 0.00 4.00
2691 5870 1.821136 GGCCCATCTTTTGTCTTCTGG 59.179 52.381 0.00 0.00 0.00 3.86
2692 5871 2.517959 TGGCCCATCTTTTGTCTTCTG 58.482 47.619 0.00 0.00 0.00 3.02
2693 5872 2.978156 TGGCCCATCTTTTGTCTTCT 57.022 45.000 0.00 0.00 0.00 2.85
2694 5873 3.573967 TCTTTGGCCCATCTTTTGTCTTC 59.426 43.478 0.00 0.00 0.00 2.87
2695 5874 3.575805 TCTTTGGCCCATCTTTTGTCTT 58.424 40.909 0.00 0.00 0.00 3.01
2696 5875 3.243359 TCTTTGGCCCATCTTTTGTCT 57.757 42.857 0.00 0.00 0.00 3.41
2697 5876 3.321968 ACTTCTTTGGCCCATCTTTTGTC 59.678 43.478 0.00 0.00 0.00 3.18
2698 5877 3.308401 ACTTCTTTGGCCCATCTTTTGT 58.692 40.909 0.00 0.00 0.00 2.83
2699 5878 4.524328 AGTACTTCTTTGGCCCATCTTTTG 59.476 41.667 0.00 0.00 0.00 2.44
2700 5879 4.740902 AGTACTTCTTTGGCCCATCTTTT 58.259 39.130 0.00 0.00 0.00 2.27
2701 5880 4.388577 AGTACTTCTTTGGCCCATCTTT 57.611 40.909 0.00 0.00 0.00 2.52
2702 5881 4.783227 TCTAGTACTTCTTTGGCCCATCTT 59.217 41.667 0.00 0.00 0.00 2.40
2703 5882 4.362677 TCTAGTACTTCTTTGGCCCATCT 58.637 43.478 0.00 0.00 0.00 2.90
2704 5883 4.443598 CCTCTAGTACTTCTTTGGCCCATC 60.444 50.000 0.00 0.00 0.00 3.51
2705 5884 3.456277 CCTCTAGTACTTCTTTGGCCCAT 59.544 47.826 0.00 0.00 0.00 4.00
2706 5885 2.838202 CCTCTAGTACTTCTTTGGCCCA 59.162 50.000 0.00 0.00 0.00 5.36
2707 5886 2.170817 CCCTCTAGTACTTCTTTGGCCC 59.829 54.545 0.00 0.00 0.00 5.80
2708 5887 2.170817 CCCCTCTAGTACTTCTTTGGCC 59.829 54.545 0.00 0.00 0.00 5.36
2709 5888 2.838813 ACCCCTCTAGTACTTCTTTGGC 59.161 50.000 0.00 0.00 0.00 4.52
2710 5889 3.369576 GCACCCCTCTAGTACTTCTTTGG 60.370 52.174 0.00 0.00 0.00 3.28
2711 5890 3.369576 GGCACCCCTCTAGTACTTCTTTG 60.370 52.174 0.00 0.00 0.00 2.77
2712 5891 2.838813 GGCACCCCTCTAGTACTTCTTT 59.161 50.000 0.00 0.00 0.00 2.52
2713 5892 2.468915 GGCACCCCTCTAGTACTTCTT 58.531 52.381 0.00 0.00 0.00 2.52
2714 5893 2.162264 GGCACCCCTCTAGTACTTCT 57.838 55.000 0.00 0.00 0.00 2.85
2733 5912 4.410400 GGTTGTGCTCCCCTCGGG 62.410 72.222 0.00 0.00 46.11 5.14
2734 5913 4.410400 GGGTTGTGCTCCCCTCGG 62.410 72.222 0.00 0.00 39.08 4.63
2735 5914 3.636231 TGGGTTGTGCTCCCCTCG 61.636 66.667 0.00 0.00 44.00 4.63
2736 5915 2.034221 GTGGGTTGTGCTCCCCTC 59.966 66.667 0.00 0.00 44.00 4.30
2737 5916 3.580319 GGTGGGTTGTGCTCCCCT 61.580 66.667 0.00 0.00 44.00 4.79
2738 5917 3.580319 AGGTGGGTTGTGCTCCCC 61.580 66.667 0.00 0.00 44.00 4.81
2739 5918 2.282462 CAGGTGGGTTGTGCTCCC 60.282 66.667 0.00 0.00 44.81 4.30
2740 5919 2.282462 CCAGGTGGGTTGTGCTCC 60.282 66.667 0.00 0.00 0.00 4.70
2757 5936 0.753111 CTAGGGTTTCTGGGCATGCC 60.753 60.000 29.47 29.47 0.00 4.40
2758 5937 0.753111 CCTAGGGTTTCTGGGCATGC 60.753 60.000 9.90 9.90 37.31 4.06
2759 5938 0.106519 CCCTAGGGTTTCTGGGCATG 60.107 60.000 20.88 0.00 42.22 4.06
2760 5939 1.289244 CCCCTAGGGTTTCTGGGCAT 61.289 60.000 26.66 0.00 42.22 4.40
2761 5940 1.928567 CCCCTAGGGTTTCTGGGCA 60.929 63.158 26.66 0.00 42.22 5.36
2762 5941 1.618447 TCCCCTAGGGTTTCTGGGC 60.618 63.158 26.66 0.00 44.74 5.36
2763 5942 0.253207 ACTCCCCTAGGGTTTCTGGG 60.253 60.000 26.66 13.05 44.74 4.45
2764 5943 1.205055 GACTCCCCTAGGGTTTCTGG 58.795 60.000 26.66 10.08 44.74 3.86
2765 5944 0.824759 CGACTCCCCTAGGGTTTCTG 59.175 60.000 26.66 10.85 44.74 3.02
2766 5945 0.708802 TCGACTCCCCTAGGGTTTCT 59.291 55.000 26.66 5.64 44.74 2.52
2767 5946 3.294904 TCGACTCCCCTAGGGTTTC 57.705 57.895 26.66 17.09 44.74 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.