Multiple sequence alignment - TraesCS2A01G268800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G268800 chr2A 100.000 3510 0 0 1 3510 432590407 432593916 0.000000e+00 6482
1 TraesCS2A01G268800 chr2A 97.153 281 7 1 21 300 585704265 585703985 1.140000e-129 473
2 TraesCS2A01G268800 chr2D 95.865 2539 42 20 298 2825 327622027 327624513 0.000000e+00 4048
3 TraesCS2A01G268800 chr2D 87.671 146 11 2 2820 2964 327624617 327624756 2.800000e-36 163
4 TraesCS2A01G268800 chr2B 95.533 2485 51 17 357 2823 396955872 396958314 0.000000e+00 3919
5 TraesCS2A01G268800 chr2B 97.163 282 7 1 20 300 597223422 597223141 3.170000e-130 475
6 TraesCS2A01G268800 chr2B 89.153 295 26 4 2820 3110 396958386 396958678 2.580000e-96 363
7 TraesCS2A01G268800 chr2B 96.875 64 1 1 298 360 396955553 396955616 4.790000e-19 106
8 TraesCS2A01G268800 chr4D 88.876 863 94 2 1403 2264 120072233 120071372 0.000000e+00 1061
9 TraesCS2A01G268800 chr4B 88.876 863 94 2 1403 2264 183002958 183002097 0.000000e+00 1061
10 TraesCS2A01G268800 chr4A 88.889 864 92 4 1403 2264 451595158 451594297 0.000000e+00 1061
11 TraesCS2A01G268800 chr4A 96.820 283 8 1 19 300 460894048 460894330 4.100000e-129 472
12 TraesCS2A01G268800 chr4A 96.503 286 8 2 16 300 729869125 729868841 4.100000e-129 472
13 TraesCS2A01G268800 chr7B 96.540 289 8 2 14 300 717328898 717329186 8.810000e-131 477
14 TraesCS2A01G268800 chr6A 97.173 283 6 2 19 300 181909846 181910127 8.810000e-131 477
15 TraesCS2A01G268800 chr6B 97.143 280 7 1 22 300 551769915 551770194 4.100000e-129 472
16 TraesCS2A01G268800 chr3A 96.809 282 7 2 21 300 717621001 717621282 1.480000e-128 470
17 TraesCS2A01G268800 chr1B 96.491 285 9 1 17 300 675768811 675769095 1.480000e-128 470


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G268800 chr2A 432590407 432593916 3509 False 6482.000000 6482 100.000000 1 3510 1 chr2A.!!$F1 3509
1 TraesCS2A01G268800 chr2D 327622027 327624756 2729 False 2105.500000 4048 91.768000 298 2964 2 chr2D.!!$F1 2666
2 TraesCS2A01G268800 chr2B 396955553 396958678 3125 False 1462.666667 3919 93.853667 298 3110 3 chr2B.!!$F1 2812
3 TraesCS2A01G268800 chr4D 120071372 120072233 861 True 1061.000000 1061 88.876000 1403 2264 1 chr4D.!!$R1 861
4 TraesCS2A01G268800 chr4B 183002097 183002958 861 True 1061.000000 1061 88.876000 1403 2264 1 chr4B.!!$R1 861
5 TraesCS2A01G268800 chr4A 451594297 451595158 861 True 1061.000000 1061 88.889000 1403 2264 1 chr4A.!!$R1 861

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.0 0.0 0.0 3.24 F
975 1251 0.332972 AATCAACAAGGGAGGGAGGC 59.667 55.0 0.0 0.0 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1578 1866 1.290203 GCTTGATTTCGCGGATGAGA 58.710 50.0 6.13 0.0 0.0 3.27 R
2861 3258 0.999406 CGTGCTTACGGGAGATGTTG 59.001 55.0 0.00 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
50 51 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
51 52 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
52 53 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
53 54 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
54 55 1.068588 TCAGTACAGACACAAGCGCTT 59.931 47.619 18.98 18.98 0.00 4.68
55 56 2.295070 TCAGTACAGACACAAGCGCTTA 59.705 45.455 24.55 0.72 0.00 3.09
56 57 3.056821 TCAGTACAGACACAAGCGCTTAT 60.057 43.478 24.55 9.39 0.00 1.73
57 58 4.157105 TCAGTACAGACACAAGCGCTTATA 59.843 41.667 24.55 4.12 0.00 0.98
58 59 5.043903 CAGTACAGACACAAGCGCTTATAT 58.956 41.667 24.55 10.78 0.00 0.86
59 60 6.038936 TCAGTACAGACACAAGCGCTTATATA 59.961 38.462 24.55 5.89 0.00 0.86
60 61 6.142480 CAGTACAGACACAAGCGCTTATATAC 59.858 42.308 24.55 16.63 0.00 1.47
61 62 5.006153 ACAGACACAAGCGCTTATATACA 57.994 39.130 24.55 0.00 0.00 2.29
62 63 4.804139 ACAGACACAAGCGCTTATATACAC 59.196 41.667 24.55 10.53 0.00 2.90
63 64 4.042398 AGACACAAGCGCTTATATACACG 58.958 43.478 24.55 10.39 0.00 4.49
70 71 3.532213 CGCTTATATACACGCGCATAC 57.468 47.619 5.73 0.00 39.11 2.39
71 72 2.912345 CGCTTATATACACGCGCATACA 59.088 45.455 5.73 0.00 39.11 2.29
72 73 3.241239 CGCTTATATACACGCGCATACAC 60.241 47.826 5.73 0.00 39.11 2.90
73 74 3.918591 GCTTATATACACGCGCATACACT 59.081 43.478 5.73 0.00 0.00 3.55
74 75 4.030306 GCTTATATACACGCGCATACACTC 59.970 45.833 5.73 0.00 0.00 3.51
75 76 3.636282 ATATACACGCGCATACACTCA 57.364 42.857 5.73 0.00 0.00 3.41
76 77 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
77 78 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
78 79 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
79 80 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
80 81 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
81 82 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
82 83 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
83 84 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
84 85 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
85 86 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
86 87 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
87 88 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
88 89 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
89 90 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
90 91 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
91 92 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
92 93 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
93 94 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
94 95 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
95 96 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
96 97 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
97 98 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
98 99 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
99 100 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
100 101 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
101 102 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
104 105 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
105 106 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
106 107 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
107 108 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
108 109 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
109 110 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
110 111 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
111 112 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
112 113 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
113 114 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
114 115 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
115 116 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
116 117 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
117 118 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
118 119 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
119 120 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
120 121 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
121 122 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
122 123 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
123 124 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
124 125 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
125 126 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
126 127 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
127 128 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
128 129 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
129 130 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
130 131 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
131 132 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
132 133 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
133 134 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
134 135 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
135 136 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
136 137 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
137 138 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
138 139 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
139 140 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
140 141 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
141 142 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
142 143 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
143 144 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
144 145 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
145 146 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
146 147 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
147 148 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
148 149 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
149 150 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
150 151 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
151 152 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
152 153 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
153 154 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
154 155 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
155 156 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
156 157 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
157 158 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
158 159 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
159 160 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
160 161 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
161 162 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
162 163 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
163 164 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
164 165 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
165 166 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
166 167 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
167 168 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
168 169 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
169 170 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
182 183 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
183 184 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
204 205 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
205 206 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
206 207 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
207 208 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
208 209 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
209 210 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
210 211 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
211 212 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
212 213 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
213 214 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
214 215 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
215 216 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
216 217 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
227 228 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
228 229 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
229 230 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
230 231 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
231 232 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
232 233 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
233 234 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
234 235 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
235 236 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
236 237 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
237 238 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
238 239 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
239 240 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
240 241 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
241 242 5.827797 CCGGAAATCCTGAAATAAATCCAGA 59.172 40.000 0.00 0.00 0.00 3.86
242 243 6.321181 CCGGAAATCCTGAAATAAATCCAGAA 59.679 38.462 0.00 0.00 0.00 3.02
243 244 7.147915 CCGGAAATCCTGAAATAAATCCAGAAA 60.148 37.037 0.00 0.00 0.00 2.52
244 245 8.416329 CGGAAATCCTGAAATAAATCCAGAAAT 58.584 33.333 0.00 0.00 0.00 2.17
250 251 8.352201 TCCTGAAATAAATCCAGAAATAATGCG 58.648 33.333 0.00 0.00 0.00 4.73
251 252 8.352201 CCTGAAATAAATCCAGAAATAATGCGA 58.648 33.333 0.00 0.00 0.00 5.10
252 253 9.390795 CTGAAATAAATCCAGAAATAATGCGAG 57.609 33.333 0.00 0.00 0.00 5.03
253 254 8.902806 TGAAATAAATCCAGAAATAATGCGAGT 58.097 29.630 0.00 0.00 0.00 4.18
256 257 6.619801 AAATCCAGAAATAATGCGAGTACC 57.380 37.500 0.00 0.00 0.00 3.34
257 258 4.746535 TCCAGAAATAATGCGAGTACCA 57.253 40.909 0.00 0.00 0.00 3.25
258 259 4.693283 TCCAGAAATAATGCGAGTACCAG 58.307 43.478 0.00 0.00 0.00 4.00
259 260 4.404394 TCCAGAAATAATGCGAGTACCAGA 59.596 41.667 0.00 0.00 0.00 3.86
260 261 5.105106 TCCAGAAATAATGCGAGTACCAGAA 60.105 40.000 0.00 0.00 0.00 3.02
261 262 5.760253 CCAGAAATAATGCGAGTACCAGAAT 59.240 40.000 0.00 0.00 0.00 2.40
262 263 6.260936 CCAGAAATAATGCGAGTACCAGAATT 59.739 38.462 0.00 0.00 0.00 2.17
263 264 7.201732 CCAGAAATAATGCGAGTACCAGAATTT 60.202 37.037 0.00 0.00 0.00 1.82
264 265 7.641411 CAGAAATAATGCGAGTACCAGAATTTG 59.359 37.037 0.00 0.00 0.00 2.32
265 266 7.552687 AGAAATAATGCGAGTACCAGAATTTGA 59.447 33.333 0.00 0.00 0.00 2.69
266 267 7.624360 AATAATGCGAGTACCAGAATTTGAA 57.376 32.000 0.00 0.00 0.00 2.69
267 268 4.946784 ATGCGAGTACCAGAATTTGAAC 57.053 40.909 0.00 0.00 0.00 3.18
268 269 4.002906 TGCGAGTACCAGAATTTGAACT 57.997 40.909 0.00 0.00 0.00 3.01
269 270 3.994392 TGCGAGTACCAGAATTTGAACTC 59.006 43.478 0.00 0.00 36.79 3.01
270 271 4.246458 GCGAGTACCAGAATTTGAACTCT 58.754 43.478 0.00 0.00 37.42 3.24
271 272 4.092091 GCGAGTACCAGAATTTGAACTCTG 59.908 45.833 0.00 0.00 37.42 3.35
272 273 5.470368 CGAGTACCAGAATTTGAACTCTGA 58.530 41.667 3.94 0.00 41.38 3.27
273 274 6.102663 CGAGTACCAGAATTTGAACTCTGAT 58.897 40.000 3.94 0.00 41.38 2.90
274 275 6.035435 CGAGTACCAGAATTTGAACTCTGATG 59.965 42.308 3.94 0.00 41.38 3.07
275 276 6.176183 AGTACCAGAATTTGAACTCTGATGG 58.824 40.000 3.94 0.00 41.38 3.51
276 277 4.338879 ACCAGAATTTGAACTCTGATGGG 58.661 43.478 3.94 0.00 41.38 4.00
277 278 4.202609 ACCAGAATTTGAACTCTGATGGGT 60.203 41.667 3.94 0.00 41.38 4.51
278 279 4.768968 CCAGAATTTGAACTCTGATGGGTT 59.231 41.667 3.94 0.00 41.38 4.11
279 280 5.336213 CCAGAATTTGAACTCTGATGGGTTG 60.336 44.000 3.94 0.00 41.38 3.77
280 281 4.768968 AGAATTTGAACTCTGATGGGTTGG 59.231 41.667 0.00 0.00 0.00 3.77
281 282 2.584835 TTGAACTCTGATGGGTTGGG 57.415 50.000 0.00 0.00 0.00 4.12
282 283 1.741028 TGAACTCTGATGGGTTGGGA 58.259 50.000 0.00 0.00 0.00 4.37
283 284 2.278245 TGAACTCTGATGGGTTGGGAT 58.722 47.619 0.00 0.00 0.00 3.85
284 285 3.459828 TGAACTCTGATGGGTTGGGATA 58.540 45.455 0.00 0.00 0.00 2.59
285 286 3.199946 TGAACTCTGATGGGTTGGGATAC 59.800 47.826 0.00 0.00 0.00 2.24
300 301 3.821421 GGATACCACTGTCCACCTAAG 57.179 52.381 0.00 0.00 34.57 2.18
301 302 3.105283 GGATACCACTGTCCACCTAAGT 58.895 50.000 0.00 0.00 34.57 2.24
302 303 3.132467 GGATACCACTGTCCACCTAAGTC 59.868 52.174 0.00 0.00 34.57 3.01
303 304 2.097110 ACCACTGTCCACCTAAGTCA 57.903 50.000 0.00 0.00 0.00 3.41
304 305 1.692519 ACCACTGTCCACCTAAGTCAC 59.307 52.381 0.00 0.00 0.00 3.67
305 306 1.691976 CCACTGTCCACCTAAGTCACA 59.308 52.381 0.00 0.00 0.00 3.58
306 307 2.303022 CCACTGTCCACCTAAGTCACAT 59.697 50.000 0.00 0.00 0.00 3.21
307 308 3.589988 CACTGTCCACCTAAGTCACATC 58.410 50.000 0.00 0.00 0.00 3.06
413 673 4.082895 CGACTTCCTCTTCTCGAAAGGTTA 60.083 45.833 7.27 0.00 0.00 2.85
494 757 3.627395 TTGTATTGCCACAGACCCTAG 57.373 47.619 0.00 0.00 0.00 3.02
604 874 4.325265 GGGTGCATGGGGATGAATGATATA 60.325 45.833 0.00 0.00 0.00 0.86
605 875 5.452255 GGTGCATGGGGATGAATGATATAT 58.548 41.667 0.00 0.00 0.00 0.86
704 974 1.648116 ATGGACCATGCAGCCTTTTT 58.352 45.000 6.06 0.00 0.00 1.94
707 977 1.260544 GACCATGCAGCCTTTTTCCT 58.739 50.000 0.00 0.00 0.00 3.36
708 978 1.620323 GACCATGCAGCCTTTTTCCTT 59.380 47.619 0.00 0.00 0.00 3.36
709 979 2.037641 GACCATGCAGCCTTTTTCCTTT 59.962 45.455 0.00 0.00 0.00 3.11
710 980 2.439135 ACCATGCAGCCTTTTTCCTTTT 59.561 40.909 0.00 0.00 0.00 2.27
711 981 2.809696 CCATGCAGCCTTTTTCCTTTTG 59.190 45.455 0.00 0.00 0.00 2.44
712 982 3.469739 CATGCAGCCTTTTTCCTTTTGT 58.530 40.909 0.00 0.00 0.00 2.83
713 983 3.625649 TGCAGCCTTTTTCCTTTTGTT 57.374 38.095 0.00 0.00 0.00 2.83
714 984 3.949132 TGCAGCCTTTTTCCTTTTGTTT 58.051 36.364 0.00 0.00 0.00 2.83
715 985 4.331108 TGCAGCCTTTTTCCTTTTGTTTT 58.669 34.783 0.00 0.00 0.00 2.43
716 986 4.155644 TGCAGCCTTTTTCCTTTTGTTTTG 59.844 37.500 0.00 0.00 0.00 2.44
871 1147 1.513158 CGTCGAGAACCATGAGGCT 59.487 57.895 0.00 0.00 39.06 4.58
930 1206 8.560355 TTAATACTTTGAGCAGCAGATTAACA 57.440 30.769 0.00 0.00 0.00 2.41
967 1243 3.439857 TCCCAGAGAAATCAACAAGGG 57.560 47.619 0.00 0.00 36.38 3.95
968 1244 2.986019 TCCCAGAGAAATCAACAAGGGA 59.014 45.455 0.00 0.00 41.55 4.20
969 1245 3.009473 TCCCAGAGAAATCAACAAGGGAG 59.991 47.826 0.00 0.00 39.06 4.30
970 1246 3.350833 CCAGAGAAATCAACAAGGGAGG 58.649 50.000 0.00 0.00 0.00 4.30
971 1247 3.350833 CAGAGAAATCAACAAGGGAGGG 58.649 50.000 0.00 0.00 0.00 4.30
972 1248 3.009473 CAGAGAAATCAACAAGGGAGGGA 59.991 47.826 0.00 0.00 0.00 4.20
973 1249 3.265479 AGAGAAATCAACAAGGGAGGGAG 59.735 47.826 0.00 0.00 0.00 4.30
974 1250 2.310052 AGAAATCAACAAGGGAGGGAGG 59.690 50.000 0.00 0.00 0.00 4.30
975 1251 0.332972 AATCAACAAGGGAGGGAGGC 59.667 55.000 0.00 0.00 0.00 4.70
1920 2208 2.107750 CTCCGCAGCATGGACGAT 59.892 61.111 0.00 0.00 35.86 3.73
1992 2280 2.345244 CAGACCAAGCAGCTCGGT 59.655 61.111 4.08 4.08 35.12 4.69
2334 2622 7.707893 CCATGGATCAATGATAAGGACAAAAAC 59.292 37.037 11.98 0.00 0.00 2.43
2442 2731 0.529833 CATGCACCTCGAGTCAGTCT 59.470 55.000 12.31 0.00 0.00 3.24
2443 2732 0.529833 ATGCACCTCGAGTCAGTCTG 59.470 55.000 12.31 0.00 0.00 3.51
2444 2733 0.823769 TGCACCTCGAGTCAGTCTGT 60.824 55.000 12.31 0.00 0.00 3.41
2445 2734 0.109504 GCACCTCGAGTCAGTCTGTC 60.110 60.000 12.31 0.00 0.00 3.51
2446 2735 0.167033 CACCTCGAGTCAGTCTGTCG 59.833 60.000 12.31 6.54 34.98 4.35
2526 2815 8.707839 CATTTCTGTTGTTGTTAACACAAGTTT 58.292 29.630 18.01 4.62 43.83 2.66
2546 2835 8.624776 CAAGTTTAAGTATCCATCCATCCTTTC 58.375 37.037 0.00 0.00 0.00 2.62
2645 2934 5.521906 TTTGCTACTGTTGTTGCCAATTA 57.478 34.783 0.00 0.00 42.66 1.40
2652 2941 2.814919 TGTTGTTGCCAATTACTACCGG 59.185 45.455 0.00 0.00 32.11 5.28
2664 2953 2.335316 ACTACCGGCAACAACTCAAA 57.665 45.000 0.00 0.00 0.00 2.69
2682 2971 4.910195 TCAAATGATGCAGTCTGGTACTT 58.090 39.130 1.14 0.00 35.76 2.24
2746 3036 3.443045 CCATCGTTGCAGGTGCCC 61.443 66.667 0.00 0.00 41.18 5.36
2777 3067 0.249447 AAAAGCCAAAAGGCAGCGAC 60.249 50.000 9.42 0.00 37.35 5.19
2814 3104 4.664150 AGGTGCTTAGAGAGATGCTTAC 57.336 45.455 0.00 0.00 0.00 2.34
2859 3256 9.530633 GCTTAGAGAAAGACGGATTTATTTCTA 57.469 33.333 0.00 0.00 40.97 2.10
2964 3362 3.084039 ACGTTGGAGGAATAGACGTACA 58.916 45.455 0.00 0.00 44.10 2.90
2986 3385 0.301687 ACAGATCTTAATTGCGCGCG 59.698 50.000 28.44 28.44 0.00 6.86
3009 3408 4.083581 GCACATGCACTTTAGGTGTTAG 57.916 45.455 0.00 0.00 46.86 2.34
3010 3409 3.119849 GCACATGCACTTTAGGTGTTAGG 60.120 47.826 0.00 0.00 46.86 2.69
3030 3429 5.019785 AGGACATTTACCGATAAGACCAC 57.980 43.478 0.00 0.00 0.00 4.16
3110 3510 5.374080 CACACGTATTTGCTTGTGAACTAG 58.626 41.667 0.02 0.00 39.89 2.57
3111 3511 5.176774 CACACGTATTTGCTTGTGAACTAGA 59.823 40.000 0.00 0.00 39.89 2.43
3112 3512 5.405571 ACACGTATTTGCTTGTGAACTAGAG 59.594 40.000 0.00 0.00 36.25 2.43
3113 3513 5.633601 CACGTATTTGCTTGTGAACTAGAGA 59.366 40.000 0.00 0.00 34.29 3.10
3114 3514 6.311445 CACGTATTTGCTTGTGAACTAGAGAT 59.689 38.462 0.00 0.00 34.29 2.75
3115 3515 6.311445 ACGTATTTGCTTGTGAACTAGAGATG 59.689 38.462 0.00 0.00 0.00 2.90
3116 3516 6.531594 CGTATTTGCTTGTGAACTAGAGATGA 59.468 38.462 0.00 0.00 0.00 2.92
3117 3517 6.981762 ATTTGCTTGTGAACTAGAGATGAG 57.018 37.500 0.00 0.00 0.00 2.90
3118 3518 5.474578 TTGCTTGTGAACTAGAGATGAGT 57.525 39.130 0.00 0.00 0.00 3.41
3119 3519 6.590234 TTGCTTGTGAACTAGAGATGAGTA 57.410 37.500 0.00 0.00 0.00 2.59
3120 3520 6.590234 TGCTTGTGAACTAGAGATGAGTAA 57.410 37.500 0.00 0.00 0.00 2.24
3121 3521 6.625362 TGCTTGTGAACTAGAGATGAGTAAG 58.375 40.000 0.00 0.00 0.00 2.34
3122 3522 6.434340 TGCTTGTGAACTAGAGATGAGTAAGA 59.566 38.462 0.00 0.00 0.00 2.10
3123 3523 6.972328 GCTTGTGAACTAGAGATGAGTAAGAG 59.028 42.308 0.00 0.00 0.00 2.85
3124 3524 6.443934 TGTGAACTAGAGATGAGTAAGAGC 57.556 41.667 0.00 0.00 0.00 4.09
3125 3525 5.946377 TGTGAACTAGAGATGAGTAAGAGCA 59.054 40.000 0.00 0.00 0.00 4.26
3126 3526 6.605194 TGTGAACTAGAGATGAGTAAGAGCAT 59.395 38.462 0.00 0.00 0.00 3.79
3127 3527 7.138736 GTGAACTAGAGATGAGTAAGAGCATC 58.861 42.308 0.00 0.00 40.85 3.91
3140 3540 2.048444 GAGCATCTTCAGCCCATTGA 57.952 50.000 0.00 0.00 0.00 2.57
3141 3541 1.948145 GAGCATCTTCAGCCCATTGAG 59.052 52.381 0.00 0.00 0.00 3.02
3142 3542 0.384669 GCATCTTCAGCCCATTGAGC 59.615 55.000 0.00 0.00 0.00 4.26
3143 3543 1.030457 CATCTTCAGCCCATTGAGCC 58.970 55.000 0.00 0.00 0.00 4.70
3144 3544 0.924823 ATCTTCAGCCCATTGAGCCT 59.075 50.000 0.00 0.00 0.00 4.58
3145 3545 0.254178 TCTTCAGCCCATTGAGCCTC 59.746 55.000 0.00 0.00 0.00 4.70
3146 3546 0.255318 CTTCAGCCCATTGAGCCTCT 59.745 55.000 0.00 0.00 0.00 3.69
3147 3547 0.254178 TTCAGCCCATTGAGCCTCTC 59.746 55.000 0.00 0.00 0.00 3.20
3148 3548 0.911045 TCAGCCCATTGAGCCTCTCA 60.911 55.000 0.00 0.00 38.87 3.27
3149 3549 0.464013 CAGCCCATTGAGCCTCTCAG 60.464 60.000 0.00 0.00 41.75 3.35
3150 3550 1.153005 GCCCATTGAGCCTCTCAGG 60.153 63.158 0.00 0.00 41.75 3.86
3151 3551 1.630126 GCCCATTGAGCCTCTCAGGA 61.630 60.000 0.00 0.00 41.75 3.86
3152 3552 0.469070 CCCATTGAGCCTCTCAGGAG 59.531 60.000 0.00 0.00 41.75 3.69
3175 3575 2.203567 TTTTTGGTCGCCTGGGGG 60.204 61.111 11.17 0.78 0.00 5.40
3187 3587 4.543361 TGGGGGCTACCGGCGATA 62.543 66.667 9.30 0.00 42.94 2.92
3188 3588 3.236233 GGGGGCTACCGGCGATAA 61.236 66.667 9.30 0.00 42.94 1.75
3189 3589 2.030113 GGGGCTACCGGCGATAAC 59.970 66.667 9.30 0.00 42.94 1.89
3190 3590 2.505167 GGGGCTACCGGCGATAACT 61.505 63.158 9.30 0.00 42.94 2.24
3191 3591 1.444672 GGGCTACCGGCGATAACTT 59.555 57.895 9.30 0.00 42.94 2.66
3192 3592 0.179065 GGGCTACCGGCGATAACTTT 60.179 55.000 9.30 0.00 42.94 2.66
3193 3593 1.069049 GGGCTACCGGCGATAACTTTA 59.931 52.381 9.30 0.00 42.94 1.85
3194 3594 2.401351 GGCTACCGGCGATAACTTTAG 58.599 52.381 9.30 0.00 42.94 1.85
3195 3595 1.791204 GCTACCGGCGATAACTTTAGC 59.209 52.381 9.30 0.00 0.00 3.09
3196 3596 2.401351 CTACCGGCGATAACTTTAGCC 58.599 52.381 9.30 0.00 45.67 3.93
3197 3597 0.828677 ACCGGCGATAACTTTAGCCT 59.171 50.000 9.30 0.00 46.85 4.58
3198 3598 1.217882 CCGGCGATAACTTTAGCCTG 58.782 55.000 9.30 0.00 46.85 4.85
3199 3599 1.217882 CGGCGATAACTTTAGCCTGG 58.782 55.000 0.00 0.00 46.85 4.45
3200 3600 1.594331 GGCGATAACTTTAGCCTGGG 58.406 55.000 0.00 0.00 45.67 4.45
3201 3601 1.134189 GGCGATAACTTTAGCCTGGGT 60.134 52.381 2.98 2.98 45.67 4.51
3202 3602 1.940613 GCGATAACTTTAGCCTGGGTG 59.059 52.381 9.02 0.00 0.00 4.61
3203 3603 2.679930 GCGATAACTTTAGCCTGGGTGT 60.680 50.000 9.02 0.00 0.00 4.16
3204 3604 3.195661 CGATAACTTTAGCCTGGGTGTC 58.804 50.000 9.02 0.00 0.00 3.67
3205 3605 3.369052 CGATAACTTTAGCCTGGGTGTCA 60.369 47.826 9.02 0.00 0.00 3.58
3206 3606 4.585879 GATAACTTTAGCCTGGGTGTCAA 58.414 43.478 9.02 0.00 0.00 3.18
3207 3607 3.306472 AACTTTAGCCTGGGTGTCAAA 57.694 42.857 9.02 0.31 0.00 2.69
3208 3608 3.306472 ACTTTAGCCTGGGTGTCAAAA 57.694 42.857 9.02 0.00 0.00 2.44
3209 3609 3.844640 ACTTTAGCCTGGGTGTCAAAAT 58.155 40.909 9.02 0.00 0.00 1.82
3210 3610 4.223144 ACTTTAGCCTGGGTGTCAAAATT 58.777 39.130 9.02 0.00 0.00 1.82
3211 3611 4.280929 ACTTTAGCCTGGGTGTCAAAATTC 59.719 41.667 9.02 0.00 0.00 2.17
3212 3612 1.632589 AGCCTGGGTGTCAAAATTCC 58.367 50.000 0.00 0.00 0.00 3.01
3213 3613 1.133199 AGCCTGGGTGTCAAAATTCCA 60.133 47.619 0.00 0.00 0.00 3.53
3214 3614 1.000843 GCCTGGGTGTCAAAATTCCAC 59.999 52.381 0.00 0.00 0.00 4.02
3215 3615 2.597455 CCTGGGTGTCAAAATTCCACT 58.403 47.619 0.00 0.00 0.00 4.00
3216 3616 2.558359 CCTGGGTGTCAAAATTCCACTC 59.442 50.000 0.00 0.00 0.00 3.51
3217 3617 2.226330 TGGGTGTCAAAATTCCACTCG 58.774 47.619 0.00 0.00 32.13 4.18
3218 3618 2.227194 GGGTGTCAAAATTCCACTCGT 58.773 47.619 0.00 0.00 0.00 4.18
3219 3619 2.621526 GGGTGTCAAAATTCCACTCGTT 59.378 45.455 0.00 0.00 0.00 3.85
3220 3620 3.550030 GGGTGTCAAAATTCCACTCGTTG 60.550 47.826 0.00 0.00 0.00 4.10
3221 3621 3.066203 GGTGTCAAAATTCCACTCGTTGT 59.934 43.478 0.00 0.00 0.00 3.32
3222 3622 4.279659 GTGTCAAAATTCCACTCGTTGTC 58.720 43.478 0.00 0.00 0.00 3.18
3223 3623 3.314080 TGTCAAAATTCCACTCGTTGTCC 59.686 43.478 0.00 0.00 0.00 4.02
3224 3624 2.882137 TCAAAATTCCACTCGTTGTCCC 59.118 45.455 0.00 0.00 0.00 4.46
3225 3625 1.905637 AAATTCCACTCGTTGTCCCC 58.094 50.000 0.00 0.00 0.00 4.81
3226 3626 0.037734 AATTCCACTCGTTGTCCCCC 59.962 55.000 0.00 0.00 0.00 5.40
3244 3644 3.391382 CACCCCCACCTCCTCGTC 61.391 72.222 0.00 0.00 0.00 4.20
3245 3645 3.602030 ACCCCCACCTCCTCGTCT 61.602 66.667 0.00 0.00 0.00 4.18
3246 3646 3.077556 CCCCCACCTCCTCGTCTG 61.078 72.222 0.00 0.00 0.00 3.51
3247 3647 2.283966 CCCCACCTCCTCGTCTGT 60.284 66.667 0.00 0.00 0.00 3.41
3248 3648 2.352032 CCCCACCTCCTCGTCTGTC 61.352 68.421 0.00 0.00 0.00 3.51
3249 3649 1.304547 CCCACCTCCTCGTCTGTCT 60.305 63.158 0.00 0.00 0.00 3.41
3250 3650 1.316706 CCCACCTCCTCGTCTGTCTC 61.317 65.000 0.00 0.00 0.00 3.36
3251 3651 0.322997 CCACCTCCTCGTCTGTCTCT 60.323 60.000 0.00 0.00 0.00 3.10
3252 3652 1.091537 CACCTCCTCGTCTGTCTCTC 58.908 60.000 0.00 0.00 0.00 3.20
3253 3653 0.034863 ACCTCCTCGTCTGTCTCTCC 60.035 60.000 0.00 0.00 0.00 3.71
3254 3654 0.254747 CCTCCTCGTCTGTCTCTCCT 59.745 60.000 0.00 0.00 0.00 3.69
3255 3655 1.663695 CTCCTCGTCTGTCTCTCCTC 58.336 60.000 0.00 0.00 0.00 3.71
3256 3656 1.209504 CTCCTCGTCTGTCTCTCCTCT 59.790 57.143 0.00 0.00 0.00 3.69
3257 3657 1.065782 TCCTCGTCTGTCTCTCCTCTG 60.066 57.143 0.00 0.00 0.00 3.35
3258 3658 0.732571 CTCGTCTGTCTCTCCTCTGC 59.267 60.000 0.00 0.00 0.00 4.26
3259 3659 0.326595 TCGTCTGTCTCTCCTCTGCT 59.673 55.000 0.00 0.00 0.00 4.24
3260 3660 0.732571 CGTCTGTCTCTCCTCTGCTC 59.267 60.000 0.00 0.00 0.00 4.26
3261 3661 0.732571 GTCTGTCTCTCCTCTGCTCG 59.267 60.000 0.00 0.00 0.00 5.03
3262 3662 0.393673 TCTGTCTCTCCTCTGCTCGG 60.394 60.000 0.00 0.00 0.00 4.63
3263 3663 2.003658 CTGTCTCTCCTCTGCTCGGC 62.004 65.000 0.00 0.00 0.00 5.54
3264 3664 2.441164 TCTCTCCTCTGCTCGGCC 60.441 66.667 0.00 0.00 0.00 6.13
3265 3665 3.535962 CTCTCCTCTGCTCGGCCC 61.536 72.222 0.00 0.00 0.00 5.80
3266 3666 4.067512 TCTCCTCTGCTCGGCCCT 62.068 66.667 0.00 0.00 0.00 5.19
3267 3667 3.847602 CTCCTCTGCTCGGCCCTG 61.848 72.222 0.00 0.00 0.00 4.45
3270 3670 3.847602 CTCTGCTCGGCCCTGGAG 61.848 72.222 0.00 0.21 34.62 3.86
3278 3678 3.721706 GGCCCTGGAGGTGGAGTG 61.722 72.222 0.00 0.00 38.26 3.51
3279 3679 2.930562 GCCCTGGAGGTGGAGTGT 60.931 66.667 0.00 0.00 38.26 3.55
3280 3680 3.072476 CCCTGGAGGTGGAGTGTG 58.928 66.667 0.00 0.00 0.00 3.82
3281 3681 2.596851 CCCTGGAGGTGGAGTGTGG 61.597 68.421 0.00 0.00 0.00 4.17
3282 3682 2.348998 CTGGAGGTGGAGTGTGGC 59.651 66.667 0.00 0.00 0.00 5.01
3283 3683 2.447572 TGGAGGTGGAGTGTGGCA 60.448 61.111 0.00 0.00 0.00 4.92
3284 3684 1.845627 CTGGAGGTGGAGTGTGGCAT 61.846 60.000 0.00 0.00 0.00 4.40
3285 3685 1.377725 GGAGGTGGAGTGTGGCATG 60.378 63.158 0.00 0.00 0.00 4.06
3286 3686 1.377725 GAGGTGGAGTGTGGCATGG 60.378 63.158 0.00 0.00 0.00 3.66
3287 3687 3.064324 GGTGGAGTGTGGCATGGC 61.064 66.667 13.29 13.29 0.00 4.40
3304 3704 4.559063 CCCTGCTCGGCCATGGAG 62.559 72.222 18.40 8.79 34.62 3.86
3305 3705 4.559063 CCTGCTCGGCCATGGAGG 62.559 72.222 18.40 16.05 41.84 4.30
3333 3733 4.435436 CTAGCTCCGCCACGCACA 62.435 66.667 0.00 0.00 0.00 4.57
3334 3734 4.435436 TAGCTCCGCCACGCACAG 62.435 66.667 0.00 0.00 0.00 3.66
3397 3797 4.077188 GCAAGCTCCGTCACGCAC 62.077 66.667 0.00 0.00 0.00 5.34
3398 3798 2.661537 CAAGCTCCGTCACGCACA 60.662 61.111 0.00 0.00 0.00 4.57
3399 3799 2.356313 AAGCTCCGTCACGCACAG 60.356 61.111 0.00 0.00 0.00 3.66
3400 3800 3.865929 AAGCTCCGTCACGCACAGG 62.866 63.158 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
25 26 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
26 27 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
27 28 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
28 29 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
29 30 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
30 31 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
31 32 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
32 33 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
33 34 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
34 35 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
35 36 1.502231 AAGCGCTTGTGTCTGTACTG 58.498 50.000 24.40 0.00 0.00 2.74
36 37 3.594603 ATAAGCGCTTGTGTCTGTACT 57.405 42.857 32.23 3.76 0.00 2.73
37 38 5.975344 TGTATATAAGCGCTTGTGTCTGTAC 59.025 40.000 32.23 21.30 0.00 2.90
38 39 5.975344 GTGTATATAAGCGCTTGTGTCTGTA 59.025 40.000 32.23 10.34 0.00 2.74
39 40 4.804139 GTGTATATAAGCGCTTGTGTCTGT 59.196 41.667 32.23 12.93 0.00 3.41
40 41 4.085568 CGTGTATATAAGCGCTTGTGTCTG 60.086 45.833 32.23 11.34 0.00 3.51
41 42 4.042398 CGTGTATATAAGCGCTTGTGTCT 58.958 43.478 32.23 16.45 0.00 3.41
42 43 3.361724 GCGTGTATATAAGCGCTTGTGTC 60.362 47.826 32.23 18.77 45.48 3.67
43 44 2.538449 GCGTGTATATAAGCGCTTGTGT 59.462 45.455 32.23 25.25 45.48 3.72
44 45 2.408487 CGCGTGTATATAAGCGCTTGTG 60.408 50.000 32.23 15.21 46.56 3.33
45 46 1.784856 CGCGTGTATATAAGCGCTTGT 59.215 47.619 32.23 27.59 46.56 3.16
46 47 2.471072 CGCGTGTATATAAGCGCTTG 57.529 50.000 32.23 13.89 46.56 4.01
51 52 3.918591 AGTGTATGCGCGTGTATATAAGC 59.081 43.478 13.61 0.00 0.00 3.09
52 53 5.059343 GTGAGTGTATGCGCGTGTATATAAG 59.941 44.000 13.61 0.00 0.00 1.73
53 54 4.913345 GTGAGTGTATGCGCGTGTATATAA 59.087 41.667 13.61 0.00 0.00 0.98
54 55 4.469552 GTGAGTGTATGCGCGTGTATATA 58.530 43.478 13.61 4.77 0.00 0.86
55 56 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
56 57 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
57 58 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
58 59 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
59 60 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
60 61 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
61 62 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
62 63 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
63 64 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
64 65 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
65 66 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
66 67 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
67 68 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
68 69 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
69 70 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
70 71 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
71 72 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
72 73 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
73 74 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
74 75 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
75 76 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
76 77 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
77 78 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
78 79 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
79 80 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
80 81 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
81 82 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
82 83 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
83 84 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
84 85 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
87 88 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
88 89 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
89 90 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
90 91 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
91 92 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
92 93 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
93 94 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
94 95 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
95 96 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
96 97 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
97 98 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
98 99 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
99 100 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
100 101 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
101 102 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
102 103 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
103 104 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
104 105 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
105 106 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
106 107 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
107 108 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
108 109 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
109 110 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
110 111 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
111 112 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
112 113 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
113 114 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
114 115 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
115 116 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
116 117 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
117 118 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
118 119 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
119 120 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
120 121 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
121 122 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
122 123 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
123 124 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
124 125 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
125 126 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
126 127 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
127 128 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
128 129 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
129 130 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
130 131 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
131 132 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
132 133 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
133 134 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
134 135 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
135 136 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
136 137 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
137 138 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
138 139 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
139 140 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
140 141 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
141 142 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
142 143 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
143 144 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
144 145 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
145 146 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
146 147 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
147 148 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
148 149 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
149 150 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
150 151 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
151 152 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
152 153 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
153 154 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
154 155 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
155 156 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
156 157 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
157 158 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
160 161 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
162 163 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
165 166 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
188 189 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
189 190 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
190 191 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
191 192 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
192 193 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
193 194 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
194 195 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
195 196 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
196 197 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
197 198 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
198 199 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
199 200 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
210 211 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
211 212 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
212 213 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
213 214 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
214 215 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
215 216 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
216 217 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
217 218 5.827797 TCTGGATTTATTTCAGGATTTCCGG 59.172 40.000 0.00 0.00 42.08 5.14
218 219 6.942532 TCTGGATTTATTTCAGGATTTCCG 57.057 37.500 0.00 0.00 42.08 4.30
224 225 8.352201 CGCATTATTTCTGGATTTATTTCAGGA 58.648 33.333 0.00 0.00 0.00 3.86
225 226 8.352201 TCGCATTATTTCTGGATTTATTTCAGG 58.648 33.333 0.00 0.00 0.00 3.86
226 227 9.390795 CTCGCATTATTTCTGGATTTATTTCAG 57.609 33.333 0.00 0.00 0.00 3.02
227 228 8.902806 ACTCGCATTATTTCTGGATTTATTTCA 58.097 29.630 0.00 0.00 0.00 2.69
230 231 8.784043 GGTACTCGCATTATTTCTGGATTTATT 58.216 33.333 0.00 0.00 0.00 1.40
231 232 7.936847 TGGTACTCGCATTATTTCTGGATTTAT 59.063 33.333 0.00 0.00 0.00 1.40
232 233 7.276658 TGGTACTCGCATTATTTCTGGATTTA 58.723 34.615 0.00 0.00 0.00 1.40
233 234 6.119536 TGGTACTCGCATTATTTCTGGATTT 58.880 36.000 0.00 0.00 0.00 2.17
234 235 5.680619 TGGTACTCGCATTATTTCTGGATT 58.319 37.500 0.00 0.00 0.00 3.01
235 236 5.070446 TCTGGTACTCGCATTATTTCTGGAT 59.930 40.000 0.00 0.00 0.00 3.41
236 237 4.404394 TCTGGTACTCGCATTATTTCTGGA 59.596 41.667 0.00 0.00 0.00 3.86
237 238 4.693283 TCTGGTACTCGCATTATTTCTGG 58.307 43.478 0.00 0.00 0.00 3.86
238 239 6.851222 ATTCTGGTACTCGCATTATTTCTG 57.149 37.500 0.00 0.00 0.00 3.02
239 240 7.552687 TCAAATTCTGGTACTCGCATTATTTCT 59.447 33.333 0.00 0.00 0.00 2.52
240 241 7.693952 TCAAATTCTGGTACTCGCATTATTTC 58.306 34.615 0.00 0.00 0.00 2.17
241 242 7.624360 TCAAATTCTGGTACTCGCATTATTT 57.376 32.000 0.00 0.00 0.00 1.40
242 243 7.336931 AGTTCAAATTCTGGTACTCGCATTATT 59.663 33.333 0.00 0.00 0.00 1.40
243 244 6.823689 AGTTCAAATTCTGGTACTCGCATTAT 59.176 34.615 0.00 0.00 0.00 1.28
244 245 6.170506 AGTTCAAATTCTGGTACTCGCATTA 58.829 36.000 0.00 0.00 0.00 1.90
245 246 5.003804 AGTTCAAATTCTGGTACTCGCATT 58.996 37.500 0.00 0.00 0.00 3.56
246 247 4.579869 AGTTCAAATTCTGGTACTCGCAT 58.420 39.130 0.00 0.00 0.00 4.73
247 248 3.994392 GAGTTCAAATTCTGGTACTCGCA 59.006 43.478 0.00 0.00 31.74 5.10
248 249 4.092091 CAGAGTTCAAATTCTGGTACTCGC 59.908 45.833 7.23 0.00 39.81 5.03
249 250 5.470368 TCAGAGTTCAAATTCTGGTACTCG 58.530 41.667 13.32 0.00 41.49 4.18
250 251 6.314896 CCATCAGAGTTCAAATTCTGGTACTC 59.685 42.308 13.32 0.00 41.49 2.59
251 252 6.176183 CCATCAGAGTTCAAATTCTGGTACT 58.824 40.000 13.32 0.00 41.49 2.73
252 253 5.355350 CCCATCAGAGTTCAAATTCTGGTAC 59.645 44.000 13.32 0.00 41.49 3.34
253 254 5.014123 ACCCATCAGAGTTCAAATTCTGGTA 59.986 40.000 13.32 0.00 41.49 3.25
254 255 4.202609 ACCCATCAGAGTTCAAATTCTGGT 60.203 41.667 13.32 5.51 41.49 4.00
255 256 4.338879 ACCCATCAGAGTTCAAATTCTGG 58.661 43.478 13.32 2.76 41.49 3.86
256 257 5.336213 CCAACCCATCAGAGTTCAAATTCTG 60.336 44.000 8.51 8.51 42.23 3.02
257 258 4.768968 CCAACCCATCAGAGTTCAAATTCT 59.231 41.667 0.00 0.00 0.00 2.40
258 259 4.082026 CCCAACCCATCAGAGTTCAAATTC 60.082 45.833 0.00 0.00 0.00 2.17
259 260 3.834231 CCCAACCCATCAGAGTTCAAATT 59.166 43.478 0.00 0.00 0.00 1.82
260 261 3.075882 TCCCAACCCATCAGAGTTCAAAT 59.924 43.478 0.00 0.00 0.00 2.32
261 262 2.445145 TCCCAACCCATCAGAGTTCAAA 59.555 45.455 0.00 0.00 0.00 2.69
262 263 2.061848 TCCCAACCCATCAGAGTTCAA 58.938 47.619 0.00 0.00 0.00 2.69
263 264 1.741028 TCCCAACCCATCAGAGTTCA 58.259 50.000 0.00 0.00 0.00 3.18
264 265 3.433740 GGTATCCCAACCCATCAGAGTTC 60.434 52.174 0.00 0.00 33.02 3.01
265 266 2.509964 GGTATCCCAACCCATCAGAGTT 59.490 50.000 0.00 0.00 33.02 3.01
266 267 2.127708 GGTATCCCAACCCATCAGAGT 58.872 52.381 0.00 0.00 33.02 3.24
267 268 2.126882 TGGTATCCCAACCCATCAGAG 58.873 52.381 0.00 0.00 37.98 3.35
268 269 1.843851 GTGGTATCCCAACCCATCAGA 59.156 52.381 0.00 0.00 44.15 3.27
269 270 1.846439 AGTGGTATCCCAACCCATCAG 59.154 52.381 0.00 0.00 44.15 2.90
270 271 1.563879 CAGTGGTATCCCAACCCATCA 59.436 52.381 0.00 0.00 44.15 3.07
271 272 1.564348 ACAGTGGTATCCCAACCCATC 59.436 52.381 0.00 0.00 44.15 3.51
272 273 1.564348 GACAGTGGTATCCCAACCCAT 59.436 52.381 0.00 0.00 44.15 4.00
273 274 0.988832 GACAGTGGTATCCCAACCCA 59.011 55.000 0.00 0.00 44.15 4.51
274 275 0.255033 GGACAGTGGTATCCCAACCC 59.745 60.000 0.00 0.00 44.15 4.11
275 276 0.988832 TGGACAGTGGTATCCCAACC 59.011 55.000 0.00 0.00 44.15 3.77
276 277 1.339727 GGTGGACAGTGGTATCCCAAC 60.340 57.143 0.00 0.00 44.15 3.77
277 278 0.988832 GGTGGACAGTGGTATCCCAA 59.011 55.000 0.00 0.00 44.15 4.12
278 279 0.118346 AGGTGGACAGTGGTATCCCA 59.882 55.000 0.00 0.00 38.87 4.37
279 280 2.170012 TAGGTGGACAGTGGTATCCC 57.830 55.000 0.00 0.00 33.69 3.85
280 281 3.105283 ACTTAGGTGGACAGTGGTATCC 58.895 50.000 0.00 0.00 35.37 2.59
281 282 3.767673 TGACTTAGGTGGACAGTGGTATC 59.232 47.826 0.00 0.00 0.00 2.24
282 283 3.514309 GTGACTTAGGTGGACAGTGGTAT 59.486 47.826 0.00 0.00 0.00 2.73
283 284 2.895404 GTGACTTAGGTGGACAGTGGTA 59.105 50.000 0.00 0.00 0.00 3.25
284 285 1.692519 GTGACTTAGGTGGACAGTGGT 59.307 52.381 0.00 0.00 0.00 4.16
285 286 1.691976 TGTGACTTAGGTGGACAGTGG 59.308 52.381 0.00 0.00 0.00 4.00
286 287 3.259374 AGATGTGACTTAGGTGGACAGTG 59.741 47.826 0.00 0.00 0.00 3.66
287 288 3.511477 AGATGTGACTTAGGTGGACAGT 58.489 45.455 0.00 0.00 0.00 3.55
288 289 4.543590 AAGATGTGACTTAGGTGGACAG 57.456 45.455 0.00 0.00 0.00 3.51
289 290 5.661056 CTAAGATGTGACTTAGGTGGACA 57.339 43.478 0.00 0.00 42.98 4.02
297 298 6.360370 AGGCTTTGACTAAGATGTGACTTA 57.640 37.500 0.49 0.00 35.80 2.24
298 299 5.234466 AGGCTTTGACTAAGATGTGACTT 57.766 39.130 0.49 0.00 35.80 3.01
299 300 4.899352 AGGCTTTGACTAAGATGTGACT 57.101 40.909 0.49 0.00 35.80 3.41
300 301 5.948992 AAAGGCTTTGACTAAGATGTGAC 57.051 39.130 12.53 0.00 35.80 3.67
301 302 8.458573 TTTTAAAGGCTTTGACTAAGATGTGA 57.541 30.769 22.32 0.00 35.80 3.58
302 303 8.567948 TCTTTTAAAGGCTTTGACTAAGATGTG 58.432 33.333 22.32 1.15 35.80 3.21
303 304 8.691661 TCTTTTAAAGGCTTTGACTAAGATGT 57.308 30.769 22.32 0.00 35.80 3.06
304 305 9.965824 TTTCTTTTAAAGGCTTTGACTAAGATG 57.034 29.630 22.32 1.99 35.80 2.90
306 307 9.965824 CATTTCTTTTAAAGGCTTTGACTAAGA 57.034 29.630 22.32 16.51 35.80 2.10
307 308 9.750125 ACATTTCTTTTAAAGGCTTTGACTAAG 57.250 29.630 22.32 14.64 36.90 2.18
604 874 7.940688 TGCTCATTTCTATGTAACCATGATCAT 59.059 33.333 1.18 1.18 33.34 2.45
605 875 7.281841 TGCTCATTTCTATGTAACCATGATCA 58.718 34.615 0.00 0.00 33.34 2.92
704 974 9.639601 AAAACAAAACAAAACAAAACAAAAGGA 57.360 22.222 0.00 0.00 0.00 3.36
708 978 8.647226 CCACAAAACAAAACAAAACAAAACAAA 58.353 25.926 0.00 0.00 0.00 2.83
709 979 7.275560 CCCACAAAACAAAACAAAACAAAACAA 59.724 29.630 0.00 0.00 0.00 2.83
710 980 6.751888 CCCACAAAACAAAACAAAACAAAACA 59.248 30.769 0.00 0.00 0.00 2.83
711 981 6.752351 ACCCACAAAACAAAACAAAACAAAAC 59.248 30.769 0.00 0.00 0.00 2.43
712 982 6.863275 ACCCACAAAACAAAACAAAACAAAA 58.137 28.000 0.00 0.00 0.00 2.44
713 983 6.451064 ACCCACAAAACAAAACAAAACAAA 57.549 29.167 0.00 0.00 0.00 2.83
714 984 6.265577 CAACCCACAAAACAAAACAAAACAA 58.734 32.000 0.00 0.00 0.00 2.83
715 985 5.733373 GCAACCCACAAAACAAAACAAAACA 60.733 36.000 0.00 0.00 0.00 2.83
716 986 4.677378 GCAACCCACAAAACAAAACAAAAC 59.323 37.500 0.00 0.00 0.00 2.43
930 1206 1.136500 GGGAATTTCTCGTCTAGCCGT 59.864 52.381 0.00 0.00 0.00 5.68
967 1243 3.054361 CCTAGAGATAGAGAGCCTCCCTC 60.054 56.522 0.00 0.00 41.07 4.30
968 1244 2.919602 CCTAGAGATAGAGAGCCTCCCT 59.080 54.545 0.00 0.00 0.00 4.20
969 1245 2.620627 GCCTAGAGATAGAGAGCCTCCC 60.621 59.091 0.00 0.00 0.00 4.30
970 1246 2.041081 TGCCTAGAGATAGAGAGCCTCC 59.959 54.545 0.00 0.00 0.00 4.30
971 1247 3.009033 TCTGCCTAGAGATAGAGAGCCTC 59.991 52.174 0.00 0.00 0.00 4.70
972 1248 2.986019 TCTGCCTAGAGATAGAGAGCCT 59.014 50.000 0.00 0.00 0.00 4.58
973 1249 3.433306 TCTGCCTAGAGATAGAGAGCC 57.567 52.381 0.00 0.00 0.00 4.70
997 1273 1.138459 CTCTCGTCACTCGCATGCT 59.862 57.895 17.13 0.00 39.67 3.79
1281 1569 3.545703 GAGAGGGAGTGAGAAGAGAGAG 58.454 54.545 0.00 0.00 0.00 3.20
1383 1671 4.452733 GGGGACGACTTGGGCTCG 62.453 72.222 0.00 0.00 37.17 5.03
1578 1866 1.290203 GCTTGATTTCGCGGATGAGA 58.710 50.000 6.13 0.00 0.00 3.27
2334 2622 8.983307 AACTAGGAATCGTTTCTAAGTACTTG 57.017 34.615 18.56 8.35 31.18 3.16
2442 2731 4.034258 GCGACTGACCGACCGACA 62.034 66.667 0.00 0.00 0.00 4.35
2443 2732 3.664223 GAGCGACTGACCGACCGAC 62.664 68.421 0.00 0.00 0.00 4.79
2444 2733 3.429141 GAGCGACTGACCGACCGA 61.429 66.667 0.00 0.00 0.00 4.69
2445 2734 4.813526 CGAGCGACTGACCGACCG 62.814 72.222 0.00 0.00 0.00 4.79
2526 2815 5.486332 AGGGAAAGGATGGATGGATACTTA 58.514 41.667 0.00 0.00 37.61 2.24
2546 2835 1.416401 ACATGCCTATAACACGGAGGG 59.584 52.381 0.00 0.00 0.00 4.30
2645 2934 2.335316 TTTGAGTTGTTGCCGGTAGT 57.665 45.000 1.90 0.00 0.00 2.73
2652 2941 3.645884 ACTGCATCATTTGAGTTGTTGC 58.354 40.909 0.00 0.00 39.26 4.17
2664 2953 5.683876 AGTAAAGTACCAGACTGCATCAT 57.316 39.130 0.00 0.00 38.87 2.45
2682 2971 7.065803 GCCAAATAGTGAGTGCTAATCAAGTAA 59.934 37.037 0.00 0.00 0.00 2.24
2831 3228 8.738645 AAATAAATCCGTCTTTCTCTAAGCAT 57.261 30.769 0.00 0.00 33.66 3.79
2859 3256 2.738643 CGTGCTTACGGGAGATGTTGAT 60.739 50.000 0.00 0.00 0.00 2.57
2861 3258 0.999406 CGTGCTTACGGGAGATGTTG 59.001 55.000 0.00 0.00 0.00 3.33
2883 3280 1.918868 ATGTACGAGCGAGCGTCACA 61.919 55.000 6.27 9.66 44.39 3.58
2964 3362 3.171277 GCGCGCAATTAAGATCTGTTTT 58.829 40.909 29.10 0.00 0.00 2.43
3004 3403 6.154877 TGGTCTTATCGGTAAATGTCCTAACA 59.845 38.462 0.00 0.00 40.38 2.41
3007 3406 5.657745 TGTGGTCTTATCGGTAAATGTCCTA 59.342 40.000 0.00 0.00 0.00 2.94
3008 3407 4.468510 TGTGGTCTTATCGGTAAATGTCCT 59.531 41.667 0.00 0.00 0.00 3.85
3009 3408 4.761975 TGTGGTCTTATCGGTAAATGTCC 58.238 43.478 0.00 0.00 0.00 4.02
3010 3409 5.815740 ACATGTGGTCTTATCGGTAAATGTC 59.184 40.000 0.00 0.00 0.00 3.06
3041 3440 1.204146 GAGTACCTCCCCAAGCATCA 58.796 55.000 0.00 0.00 0.00 3.07
3049 3448 5.859205 TTCTTTTATACGAGTACCTCCCC 57.141 43.478 0.00 0.00 0.00 4.81
3091 3491 6.531594 TCATCTCTAGTTCACAAGCAAATACG 59.468 38.462 0.00 0.00 0.00 3.06
3094 3494 6.471146 ACTCATCTCTAGTTCACAAGCAAAT 58.529 36.000 0.00 0.00 0.00 2.32
3102 3502 6.443934 TGCTCTTACTCATCTCTAGTTCAC 57.556 41.667 0.00 0.00 0.00 3.18
3110 3510 4.984161 GCTGAAGATGCTCTTACTCATCTC 59.016 45.833 5.36 1.63 46.11 2.75
3112 3512 4.057432 GGCTGAAGATGCTCTTACTCATC 58.943 47.826 0.00 0.00 36.73 2.92
3113 3513 3.181456 GGGCTGAAGATGCTCTTACTCAT 60.181 47.826 0.00 0.00 36.73 2.90
3114 3514 2.169352 GGGCTGAAGATGCTCTTACTCA 59.831 50.000 0.00 0.00 36.73 3.41
3115 3515 2.169352 TGGGCTGAAGATGCTCTTACTC 59.831 50.000 0.00 0.00 36.73 2.59
3116 3516 2.191400 TGGGCTGAAGATGCTCTTACT 58.809 47.619 0.00 0.00 36.73 2.24
3117 3517 2.698855 TGGGCTGAAGATGCTCTTAC 57.301 50.000 0.00 0.00 36.73 2.34
3118 3518 3.200605 TCAATGGGCTGAAGATGCTCTTA 59.799 43.478 0.00 0.00 36.73 2.10
3119 3519 2.025605 TCAATGGGCTGAAGATGCTCTT 60.026 45.455 0.00 0.00 39.87 2.85
3120 3520 1.562942 TCAATGGGCTGAAGATGCTCT 59.437 47.619 0.00 0.00 0.00 4.09
3121 3521 1.948145 CTCAATGGGCTGAAGATGCTC 59.052 52.381 0.00 0.00 0.00 4.26
3122 3522 2.022754 GCTCAATGGGCTGAAGATGCT 61.023 52.381 0.00 0.00 0.00 3.79
3123 3523 0.384669 GCTCAATGGGCTGAAGATGC 59.615 55.000 0.00 0.00 0.00 3.91
3124 3524 1.030457 GGCTCAATGGGCTGAAGATG 58.970 55.000 4.63 0.00 0.00 2.90
3125 3525 0.924823 AGGCTCAATGGGCTGAAGAT 59.075 50.000 4.63 0.00 40.64 2.40
3126 3526 0.254178 GAGGCTCAATGGGCTGAAGA 59.746 55.000 10.25 0.00 42.23 2.87
3127 3527 0.255318 AGAGGCTCAATGGGCTGAAG 59.745 55.000 18.26 0.00 42.23 3.02
3128 3528 0.254178 GAGAGGCTCAATGGGCTGAA 59.746 55.000 18.26 0.00 42.23 3.02
3129 3529 0.911045 TGAGAGGCTCAATGGGCTGA 60.911 55.000 18.26 0.00 42.23 4.26
3130 3530 0.464013 CTGAGAGGCTCAATGGGCTG 60.464 60.000 18.26 0.00 40.18 4.85
3131 3531 1.633915 CCTGAGAGGCTCAATGGGCT 61.634 60.000 18.26 0.82 40.18 5.19
3132 3532 1.153005 CCTGAGAGGCTCAATGGGC 60.153 63.158 18.26 0.00 40.18 5.36
3133 3533 0.469070 CTCCTGAGAGGCTCAATGGG 59.531 60.000 18.26 12.60 40.18 4.00
3158 3558 2.203567 CCCCCAGGCGACCAAAAA 60.204 61.111 0.00 0.00 0.00 1.94
3170 3570 4.543361 TATCGCCGGTAGCCCCCA 62.543 66.667 1.90 0.00 38.78 4.96
3171 3571 3.236233 TTATCGCCGGTAGCCCCC 61.236 66.667 1.90 0.00 38.78 5.40
3172 3572 2.030113 GTTATCGCCGGTAGCCCC 59.970 66.667 1.90 0.00 38.78 5.80
3173 3573 0.179065 AAAGTTATCGCCGGTAGCCC 60.179 55.000 1.90 0.00 38.78 5.19
3174 3574 2.401351 CTAAAGTTATCGCCGGTAGCC 58.599 52.381 1.90 0.00 38.78 3.93
3175 3575 1.791204 GCTAAAGTTATCGCCGGTAGC 59.209 52.381 1.90 0.69 38.52 3.58
3176 3576 2.035576 AGGCTAAAGTTATCGCCGGTAG 59.964 50.000 1.90 0.00 46.85 3.18
3177 3577 2.034124 AGGCTAAAGTTATCGCCGGTA 58.966 47.619 1.90 0.00 46.85 4.02
3178 3578 0.828677 AGGCTAAAGTTATCGCCGGT 59.171 50.000 1.90 0.00 46.85 5.28
3179 3579 1.217882 CAGGCTAAAGTTATCGCCGG 58.782 55.000 0.00 0.00 46.85 6.13
3180 3580 1.217882 CCAGGCTAAAGTTATCGCCG 58.782 55.000 0.00 0.00 46.85 6.46
3181 3581 1.134189 ACCCAGGCTAAAGTTATCGCC 60.134 52.381 0.00 0.00 42.79 5.54
3182 3582 1.940613 CACCCAGGCTAAAGTTATCGC 59.059 52.381 0.00 0.00 0.00 4.58
3183 3583 3.195661 GACACCCAGGCTAAAGTTATCG 58.804 50.000 0.00 0.00 0.00 2.92
3184 3584 4.216411 TGACACCCAGGCTAAAGTTATC 57.784 45.455 0.00 0.00 0.00 1.75
3185 3585 4.650972 TTGACACCCAGGCTAAAGTTAT 57.349 40.909 0.00 0.00 0.00 1.89
3186 3586 4.440826 TTTGACACCCAGGCTAAAGTTA 57.559 40.909 0.00 0.00 0.00 2.24
3187 3587 3.306472 TTTGACACCCAGGCTAAAGTT 57.694 42.857 0.00 0.00 0.00 2.66
3188 3588 3.306472 TTTTGACACCCAGGCTAAAGT 57.694 42.857 0.00 0.00 0.00 2.66
3189 3589 4.321974 GGAATTTTGACACCCAGGCTAAAG 60.322 45.833 0.00 0.00 33.51 1.85
3190 3590 3.576550 GGAATTTTGACACCCAGGCTAAA 59.423 43.478 0.00 0.00 34.50 1.85
3191 3591 3.161866 GGAATTTTGACACCCAGGCTAA 58.838 45.455 0.00 0.00 0.00 3.09
3192 3592 2.109128 TGGAATTTTGACACCCAGGCTA 59.891 45.455 0.00 0.00 0.00 3.93
3193 3593 1.133199 TGGAATTTTGACACCCAGGCT 60.133 47.619 0.00 0.00 0.00 4.58
3194 3594 1.000843 GTGGAATTTTGACACCCAGGC 59.999 52.381 0.00 0.00 0.00 4.85
3195 3595 2.558359 GAGTGGAATTTTGACACCCAGG 59.442 50.000 0.00 0.00 35.79 4.45
3196 3596 2.226437 CGAGTGGAATTTTGACACCCAG 59.774 50.000 0.00 0.00 35.79 4.45
3197 3597 2.226330 CGAGTGGAATTTTGACACCCA 58.774 47.619 0.00 0.00 35.79 4.51
3198 3598 2.227194 ACGAGTGGAATTTTGACACCC 58.773 47.619 0.00 0.00 35.79 4.61
3199 3599 3.066203 ACAACGAGTGGAATTTTGACACC 59.934 43.478 0.00 0.00 35.79 4.16
3200 3600 4.279659 GACAACGAGTGGAATTTTGACAC 58.720 43.478 0.00 0.00 35.43 3.67
3201 3601 3.314080 GGACAACGAGTGGAATTTTGACA 59.686 43.478 0.00 0.00 0.00 3.58
3202 3602 3.304458 GGGACAACGAGTGGAATTTTGAC 60.304 47.826 0.00 0.00 0.00 3.18
3203 3603 2.882137 GGGACAACGAGTGGAATTTTGA 59.118 45.455 0.00 0.00 0.00 2.69
3204 3604 2.030274 GGGGACAACGAGTGGAATTTTG 60.030 50.000 0.00 0.00 0.00 2.44
3205 3605 2.235891 GGGGACAACGAGTGGAATTTT 58.764 47.619 0.00 0.00 0.00 1.82
3206 3606 1.546998 GGGGGACAACGAGTGGAATTT 60.547 52.381 0.00 0.00 0.00 1.82
3207 3607 0.037734 GGGGGACAACGAGTGGAATT 59.962 55.000 0.00 0.00 0.00 2.17
3208 3608 1.683441 GGGGGACAACGAGTGGAAT 59.317 57.895 0.00 0.00 0.00 3.01
3209 3609 3.153825 GGGGGACAACGAGTGGAA 58.846 61.111 0.00 0.00 0.00 3.53
3227 3627 3.391382 GACGAGGAGGTGGGGGTG 61.391 72.222 0.00 0.00 0.00 4.61
3228 3628 3.602030 AGACGAGGAGGTGGGGGT 61.602 66.667 0.00 0.00 0.00 4.95
3229 3629 3.077556 CAGACGAGGAGGTGGGGG 61.078 72.222 0.00 0.00 0.00 5.40
3230 3630 2.283966 ACAGACGAGGAGGTGGGG 60.284 66.667 0.00 0.00 0.00 4.96
3231 3631 1.304547 AGACAGACGAGGAGGTGGG 60.305 63.158 0.00 0.00 0.00 4.61
3232 3632 0.322997 AGAGACAGACGAGGAGGTGG 60.323 60.000 0.00 0.00 0.00 4.61
3233 3633 1.091537 GAGAGACAGACGAGGAGGTG 58.908 60.000 0.00 0.00 0.00 4.00
3234 3634 0.034863 GGAGAGACAGACGAGGAGGT 60.035 60.000 0.00 0.00 0.00 3.85
3235 3635 0.254747 AGGAGAGACAGACGAGGAGG 59.745 60.000 0.00 0.00 0.00 4.30
3236 3636 1.209504 AGAGGAGAGACAGACGAGGAG 59.790 57.143 0.00 0.00 0.00 3.69
3237 3637 1.065782 CAGAGGAGAGACAGACGAGGA 60.066 57.143 0.00 0.00 0.00 3.71
3238 3638 1.378531 CAGAGGAGAGACAGACGAGG 58.621 60.000 0.00 0.00 0.00 4.63
3239 3639 0.732571 GCAGAGGAGAGACAGACGAG 59.267 60.000 0.00 0.00 0.00 4.18
3240 3640 0.326595 AGCAGAGGAGAGACAGACGA 59.673 55.000 0.00 0.00 0.00 4.20
3241 3641 0.732571 GAGCAGAGGAGAGACAGACG 59.267 60.000 0.00 0.00 0.00 4.18
3242 3642 0.732571 CGAGCAGAGGAGAGACAGAC 59.267 60.000 0.00 0.00 0.00 3.51
3243 3643 0.393673 CCGAGCAGAGGAGAGACAGA 60.394 60.000 0.00 0.00 0.00 3.41
3244 3644 2.003658 GCCGAGCAGAGGAGAGACAG 62.004 65.000 0.00 0.00 0.00 3.51
3245 3645 2.049185 GCCGAGCAGAGGAGAGACA 61.049 63.158 0.00 0.00 0.00 3.41
3246 3646 2.781158 GGCCGAGCAGAGGAGAGAC 61.781 68.421 0.00 0.00 0.00 3.36
3247 3647 2.441164 GGCCGAGCAGAGGAGAGA 60.441 66.667 0.00 0.00 0.00 3.10
3248 3648 3.535962 GGGCCGAGCAGAGGAGAG 61.536 72.222 0.00 0.00 0.00 3.20
3249 3649 4.067512 AGGGCCGAGCAGAGGAGA 62.068 66.667 0.00 0.00 0.00 3.71
3250 3650 3.847602 CAGGGCCGAGCAGAGGAG 61.848 72.222 0.00 0.00 0.00 3.69
3253 3653 3.847602 CTCCAGGGCCGAGCAGAG 61.848 72.222 0.00 0.00 0.00 3.35
3261 3661 3.721706 CACTCCACCTCCAGGGCC 61.722 72.222 0.00 0.00 40.27 5.80
3262 3662 2.930562 ACACTCCACCTCCAGGGC 60.931 66.667 0.00 0.00 40.27 5.19
3263 3663 2.596851 CCACACTCCACCTCCAGGG 61.597 68.421 0.00 0.00 40.27 4.45
3264 3664 3.072476 CCACACTCCACCTCCAGG 58.928 66.667 0.00 0.00 42.17 4.45
3265 3665 1.845627 ATGCCACACTCCACCTCCAG 61.846 60.000 0.00 0.00 0.00 3.86
3266 3666 1.847506 ATGCCACACTCCACCTCCA 60.848 57.895 0.00 0.00 0.00 3.86
3267 3667 1.377725 CATGCCACACTCCACCTCC 60.378 63.158 0.00 0.00 0.00 4.30
3268 3668 1.377725 CCATGCCACACTCCACCTC 60.378 63.158 0.00 0.00 0.00 3.85
3269 3669 2.759114 CCATGCCACACTCCACCT 59.241 61.111 0.00 0.00 0.00 4.00
3270 3670 3.064324 GCCATGCCACACTCCACC 61.064 66.667 0.00 0.00 0.00 4.61
3287 3687 4.559063 CTCCATGGCCGAGCAGGG 62.559 72.222 6.96 0.00 41.48 4.45
3288 3688 4.559063 CCTCCATGGCCGAGCAGG 62.559 72.222 6.96 3.36 44.97 4.85
3380 3780 4.077188 GTGCGTGACGGAGCTTGC 62.077 66.667 7.25 0.00 0.00 4.01
3381 3781 2.661537 TGTGCGTGACGGAGCTTG 60.662 61.111 7.25 0.00 0.00 4.01
3382 3782 2.356313 CTGTGCGTGACGGAGCTT 60.356 61.111 7.25 0.00 31.77 3.74
3383 3783 4.363990 CCTGTGCGTGACGGAGCT 62.364 66.667 7.25 0.00 31.77 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.