Multiple sequence alignment - TraesCS2A01G267900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G267900 chr2A 100.000 2476 0 0 1 2476 429719844 429717369 0.000000e+00 4573.0
1 TraesCS2A01G267900 chr2A 100.000 702 0 0 2768 3469 429717077 429716376 0.000000e+00 1297.0
2 TraesCS2A01G267900 chr2A 93.064 173 12 0 326 498 482409979 482409807 1.600000e-63 254.0
3 TraesCS2A01G267900 chr2D 96.774 1984 45 9 497 2476 309576372 309578340 0.000000e+00 3291.0
4 TraesCS2A01G267900 chr2D 89.712 243 12 2 3229 3469 309583701 309583932 7.280000e-77 298.0
5 TraesCS2A01G267900 chr2D 76.301 519 93 18 1929 2441 81516751 81516257 2.070000e-62 250.0
6 TraesCS2A01G267900 chr2D 88.350 206 14 6 2923 3128 309582018 309582213 4.470000e-59 239.0
7 TraesCS2A01G267900 chr2D 93.082 159 6 3 2768 2925 309578368 309578522 9.690000e-56 228.0
8 TraesCS2A01G267900 chr2B 96.380 1989 47 12 498 2476 362694656 362692683 0.000000e+00 3251.0
9 TraesCS2A01G267900 chr2B 92.221 707 25 13 2768 3469 362692655 362691974 0.000000e+00 974.0
10 TraesCS2A01G267900 chr2B 82.772 505 66 14 1 500 666484604 666485092 6.880000e-117 431.0
11 TraesCS2A01G267900 chr2B 92.486 173 13 0 326 498 700210506 700210334 7.430000e-62 248.0
12 TraesCS2A01G267900 chr1A 95.410 305 14 0 23 327 272074086 272073782 1.450000e-133 486.0
13 TraesCS2A01G267900 chr1A 95.425 306 13 1 23 327 272091676 272091371 1.450000e-133 486.0
14 TraesCS2A01G267900 chr1A 93.567 171 11 0 326 496 572331529 572331699 4.440000e-64 255.0
15 TraesCS2A01G267900 chr4A 95.395 304 14 0 23 326 601417666 601417363 5.210000e-133 484.0
16 TraesCS2A01G267900 chr4A 93.491 169 11 0 326 494 47646544 47646376 5.750000e-63 252.0
17 TraesCS2A01G267900 chr4A 93.491 169 11 0 326 494 219187977 219188145 5.750000e-63 252.0
18 TraesCS2A01G267900 chr7A 94.569 313 16 1 20 331 649491773 649492085 1.870000e-132 483.0
19 TraesCS2A01G267900 chr7A 94.805 308 15 1 20 326 125362972 125362665 2.420000e-131 479.0
20 TraesCS2A01G267900 chr7A 77.247 523 86 19 1929 2441 487477319 487477818 3.410000e-70 276.0
21 TraesCS2A01G267900 chr3A 94.268 314 17 1 23 336 579138781 579138469 2.420000e-131 479.0
22 TraesCS2A01G267900 chr3A 94.481 308 16 1 20 326 113559347 113559040 1.130000e-129 473.0
23 TraesCS2A01G267900 chr3A 88.947 190 21 0 311 500 15342119 15341930 5.790000e-58 235.0
24 TraesCS2A01G267900 chr6A 94.231 312 18 0 15 326 47892780 47892469 8.710000e-131 477.0
25 TraesCS2A01G267900 chr5A 94.481 308 16 1 20 326 195318872 195319179 1.130000e-129 473.0
26 TraesCS2A01G267900 chr5A 78.097 662 111 20 1816 2469 597840992 597840357 4.200000e-104 388.0
27 TraesCS2A01G267900 chr5A 76.667 660 131 18 1001 1641 597841682 597841027 9.220000e-91 344.0
28 TraesCS2A01G267900 chr5A 88.660 194 21 1 301 494 537660184 537660376 5.790000e-58 235.0
29 TraesCS2A01G267900 chr5B 77.928 666 113 22 1812 2469 586865552 586864913 5.430000e-103 385.0
30 TraesCS2A01G267900 chr5B 77.744 656 119 17 1001 1641 586866226 586865583 9.090000e-101 377.0
31 TraesCS2A01G267900 chr5B 76.735 533 89 20 1929 2451 625120718 625120211 7.380000e-67 265.0
32 TraesCS2A01G267900 chr5B 76.735 533 89 20 1929 2451 628700267 628699760 7.380000e-67 265.0
33 TraesCS2A01G267900 chr5D 77.477 666 116 20 1812 2469 479126341 479125702 5.470000e-98 368.0
34 TraesCS2A01G267900 chr5D 77.287 656 125 15 1001 1641 479127018 479126372 7.080000e-97 364.0
35 TraesCS2A01G267900 chr6B 77.049 549 92 20 1929 2469 615609089 615608567 5.670000e-73 285.0
36 TraesCS2A01G267900 chr6B 76.449 552 77 26 1929 2469 507371888 507372397 2.070000e-62 250.0
37 TraesCS2A01G267900 chr4B 92.982 171 12 0 326 496 53863878 53864048 2.070000e-62 250.0
38 TraesCS2A01G267900 chr7D 100.000 28 0 0 1063 1090 544676250 544676277 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G267900 chr2A 429716376 429719844 3468 True 2935.0 4573 100.0000 1 3469 2 chr2A.!!$R2 3468
1 TraesCS2A01G267900 chr2D 309576372 309583932 7560 False 1014.0 3291 91.9795 497 3469 4 chr2D.!!$F1 2972
2 TraesCS2A01G267900 chr2B 362691974 362694656 2682 True 2112.5 3251 94.3005 498 3469 2 chr2B.!!$R2 2971
3 TraesCS2A01G267900 chr5A 597840357 597841682 1325 True 366.0 388 77.3820 1001 2469 2 chr5A.!!$R1 1468
4 TraesCS2A01G267900 chr5B 586864913 586866226 1313 True 381.0 385 77.8360 1001 2469 2 chr5B.!!$R3 1468
5 TraesCS2A01G267900 chr5B 625120211 625120718 507 True 265.0 265 76.7350 1929 2451 1 chr5B.!!$R1 522
6 TraesCS2A01G267900 chr5B 628699760 628700267 507 True 265.0 265 76.7350 1929 2451 1 chr5B.!!$R2 522
7 TraesCS2A01G267900 chr5D 479125702 479127018 1316 True 366.0 368 77.3820 1001 2469 2 chr5D.!!$R1 1468
8 TraesCS2A01G267900 chr6B 615608567 615609089 522 True 285.0 285 77.0490 1929 2469 1 chr6B.!!$R1 540
9 TraesCS2A01G267900 chr6B 507371888 507372397 509 False 250.0 250 76.4490 1929 2469 1 chr6B.!!$F1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
830 837 0.106419 TTTGTCACCACACCTTCCCC 60.106 55.0 0.0 0.0 29.76 4.81 F
933 941 0.543749 AGATACAGAAGCCAGCCACC 59.456 55.0 0.0 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2053 2090 0.103937 GTCAGGAATCAGGAGCTCGG 59.896 60.0 7.83 2.36 0.0 4.63 R
2833 2870 0.039764 ACAGTCTGATCTCCCACGGA 59.960 55.0 6.91 0.00 0.0 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.830114 GGAATCTTCTGTACTACATTTCGG 57.170 41.667 0.00 0.00 0.00 4.30
24 25 5.753921 GGAATCTTCTGTACTACATTTCGGG 59.246 44.000 0.00 0.00 0.00 5.14
25 26 4.119442 TCTTCTGTACTACATTTCGGGC 57.881 45.455 0.00 0.00 0.00 6.13
26 27 2.973694 TCTGTACTACATTTCGGGCC 57.026 50.000 0.00 0.00 0.00 5.80
27 28 2.463752 TCTGTACTACATTTCGGGCCT 58.536 47.619 0.84 0.00 0.00 5.19
28 29 2.429610 TCTGTACTACATTTCGGGCCTC 59.570 50.000 0.84 0.00 0.00 4.70
29 30 2.431057 CTGTACTACATTTCGGGCCTCT 59.569 50.000 0.84 0.00 0.00 3.69
30 31 2.835764 TGTACTACATTTCGGGCCTCTT 59.164 45.455 0.84 0.00 0.00 2.85
31 32 3.262405 TGTACTACATTTCGGGCCTCTTT 59.738 43.478 0.84 0.00 0.00 2.52
32 33 2.711542 ACTACATTTCGGGCCTCTTTG 58.288 47.619 0.84 0.00 0.00 2.77
33 34 2.304761 ACTACATTTCGGGCCTCTTTGA 59.695 45.455 0.84 0.00 0.00 2.69
34 35 2.514458 ACATTTCGGGCCTCTTTGAT 57.486 45.000 0.84 0.00 0.00 2.57
35 36 2.807676 ACATTTCGGGCCTCTTTGATT 58.192 42.857 0.84 0.00 0.00 2.57
36 37 2.755103 ACATTTCGGGCCTCTTTGATTC 59.245 45.455 0.84 0.00 0.00 2.52
37 38 2.577606 TTTCGGGCCTCTTTGATTCA 57.422 45.000 0.84 0.00 0.00 2.57
38 39 1.821216 TTCGGGCCTCTTTGATTCAC 58.179 50.000 0.84 0.00 0.00 3.18
39 40 0.690192 TCGGGCCTCTTTGATTCACA 59.310 50.000 0.84 0.00 0.00 3.58
40 41 1.089920 CGGGCCTCTTTGATTCACAG 58.910 55.000 0.84 0.00 0.00 3.66
41 42 1.467920 GGGCCTCTTTGATTCACAGG 58.532 55.000 0.84 1.39 0.00 4.00
42 43 1.004745 GGGCCTCTTTGATTCACAGGA 59.995 52.381 0.84 0.00 0.00 3.86
43 44 2.357569 GGGCCTCTTTGATTCACAGGAT 60.358 50.000 0.84 0.00 0.00 3.24
44 45 3.359950 GGCCTCTTTGATTCACAGGATT 58.640 45.455 0.00 0.00 0.00 3.01
45 46 3.129988 GGCCTCTTTGATTCACAGGATTG 59.870 47.826 0.00 0.00 0.00 2.67
46 47 3.760684 GCCTCTTTGATTCACAGGATTGT 59.239 43.478 8.94 0.00 38.31 2.71
47 48 4.142513 GCCTCTTTGATTCACAGGATTGTC 60.143 45.833 8.94 0.00 34.62 3.18
48 49 5.005740 CCTCTTTGATTCACAGGATTGTCA 58.994 41.667 0.19 0.00 34.62 3.58
49 50 5.474532 CCTCTTTGATTCACAGGATTGTCAA 59.525 40.000 0.19 0.00 34.62 3.18
50 51 6.016024 CCTCTTTGATTCACAGGATTGTCAAA 60.016 38.462 0.19 0.00 34.62 2.69
51 52 7.345422 TCTTTGATTCACAGGATTGTCAAAA 57.655 32.000 0.19 0.00 34.62 2.44
52 53 7.954835 TCTTTGATTCACAGGATTGTCAAAAT 58.045 30.769 0.19 0.00 34.62 1.82
53 54 7.868922 TCTTTGATTCACAGGATTGTCAAAATG 59.131 33.333 0.19 0.00 34.62 2.32
54 55 6.897706 TGATTCACAGGATTGTCAAAATGA 57.102 33.333 0.00 0.00 34.62 2.57
55 56 7.287512 TGATTCACAGGATTGTCAAAATGAA 57.712 32.000 0.00 0.00 34.62 2.57
56 57 7.372714 TGATTCACAGGATTGTCAAAATGAAG 58.627 34.615 0.00 0.00 34.62 3.02
57 58 5.710513 TCACAGGATTGTCAAAATGAAGG 57.289 39.130 0.00 0.00 34.62 3.46
58 59 5.384336 TCACAGGATTGTCAAAATGAAGGA 58.616 37.500 0.00 0.00 34.62 3.36
59 60 5.832595 TCACAGGATTGTCAAAATGAAGGAA 59.167 36.000 0.00 0.00 34.62 3.36
60 61 6.494491 TCACAGGATTGTCAAAATGAAGGAAT 59.506 34.615 0.00 0.00 34.62 3.01
61 62 7.669304 TCACAGGATTGTCAAAATGAAGGAATA 59.331 33.333 0.00 0.00 34.62 1.75
62 63 7.972277 CACAGGATTGTCAAAATGAAGGAATAG 59.028 37.037 0.00 0.00 34.62 1.73
63 64 7.123247 ACAGGATTGTCAAAATGAAGGAATAGG 59.877 37.037 0.00 0.00 29.46 2.57
64 65 7.340232 CAGGATTGTCAAAATGAAGGAATAGGA 59.660 37.037 0.00 0.00 0.00 2.94
65 66 7.895429 AGGATTGTCAAAATGAAGGAATAGGAA 59.105 33.333 0.00 0.00 0.00 3.36
66 67 8.531146 GGATTGTCAAAATGAAGGAATAGGAAA 58.469 33.333 0.00 0.00 0.00 3.13
67 68 9.927668 GATTGTCAAAATGAAGGAATAGGAAAA 57.072 29.630 0.00 0.00 0.00 2.29
70 71 9.709495 TGTCAAAATGAAGGAATAGGAAAAATG 57.291 29.630 0.00 0.00 0.00 2.32
71 72 8.659491 GTCAAAATGAAGGAATAGGAAAAATGC 58.341 33.333 0.00 0.00 0.00 3.56
72 73 8.373981 TCAAAATGAAGGAATAGGAAAAATGCA 58.626 29.630 0.00 0.00 0.00 3.96
73 74 8.662141 CAAAATGAAGGAATAGGAAAAATGCAG 58.338 33.333 0.00 0.00 0.00 4.41
74 75 7.722949 AATGAAGGAATAGGAAAAATGCAGA 57.277 32.000 0.00 0.00 0.00 4.26
75 76 7.722949 ATGAAGGAATAGGAAAAATGCAGAA 57.277 32.000 0.00 0.00 0.00 3.02
76 77 7.537596 TGAAGGAATAGGAAAAATGCAGAAA 57.462 32.000 0.00 0.00 0.00 2.52
77 78 8.137745 TGAAGGAATAGGAAAAATGCAGAAAT 57.862 30.769 0.00 0.00 0.00 2.17
78 79 9.253832 TGAAGGAATAGGAAAAATGCAGAAATA 57.746 29.630 0.00 0.00 0.00 1.40
79 80 9.741647 GAAGGAATAGGAAAAATGCAGAAATAG 57.258 33.333 0.00 0.00 0.00 1.73
80 81 8.242729 AGGAATAGGAAAAATGCAGAAATAGG 57.757 34.615 0.00 0.00 0.00 2.57
81 82 8.061304 AGGAATAGGAAAAATGCAGAAATAGGA 58.939 33.333 0.00 0.00 0.00 2.94
82 83 8.864087 GGAATAGGAAAAATGCAGAAATAGGAT 58.136 33.333 0.00 0.00 0.00 3.24
83 84 9.688592 GAATAGGAAAAATGCAGAAATAGGATG 57.311 33.333 0.00 0.00 0.00 3.51
84 85 6.475596 AGGAAAAATGCAGAAATAGGATGG 57.524 37.500 0.00 0.00 0.00 3.51
85 86 5.052481 GGAAAAATGCAGAAATAGGATGGC 58.948 41.667 0.00 0.00 0.00 4.40
86 87 5.395546 GGAAAAATGCAGAAATAGGATGGCA 60.396 40.000 0.00 0.00 35.54 4.92
87 88 5.881923 AAAATGCAGAAATAGGATGGCAT 57.118 34.783 0.00 0.00 43.19 4.40
88 89 4.866508 AATGCAGAAATAGGATGGCATG 57.133 40.909 3.81 0.00 40.74 4.06
89 90 3.301794 TGCAGAAATAGGATGGCATGT 57.698 42.857 3.81 0.00 0.00 3.21
90 91 3.216800 TGCAGAAATAGGATGGCATGTC 58.783 45.455 3.81 0.00 0.00 3.06
91 92 3.117776 TGCAGAAATAGGATGGCATGTCT 60.118 43.478 3.81 4.87 0.00 3.41
92 93 3.501445 GCAGAAATAGGATGGCATGTCTC 59.499 47.826 3.81 0.00 0.00 3.36
93 94 4.711399 CAGAAATAGGATGGCATGTCTCA 58.289 43.478 3.81 0.00 0.00 3.27
94 95 5.314529 CAGAAATAGGATGGCATGTCTCAT 58.685 41.667 3.81 0.00 0.00 2.90
95 96 6.470278 CAGAAATAGGATGGCATGTCTCATA 58.530 40.000 3.81 0.00 0.00 2.15
96 97 6.594547 CAGAAATAGGATGGCATGTCTCATAG 59.405 42.308 3.81 0.00 0.00 2.23
97 98 6.271857 AGAAATAGGATGGCATGTCTCATAGT 59.728 38.462 3.81 0.00 0.00 2.12
98 99 7.455953 AGAAATAGGATGGCATGTCTCATAGTA 59.544 37.037 3.81 0.00 0.00 1.82
99 100 7.746243 AATAGGATGGCATGTCTCATAGTAT 57.254 36.000 3.81 0.00 0.00 2.12
100 101 5.674052 AGGATGGCATGTCTCATAGTATC 57.326 43.478 3.81 0.00 0.00 2.24
101 102 4.469227 AGGATGGCATGTCTCATAGTATCC 59.531 45.833 3.81 0.34 33.47 2.59
102 103 4.469227 GGATGGCATGTCTCATAGTATCCT 59.531 45.833 3.81 0.00 31.25 3.24
103 104 5.658634 GGATGGCATGTCTCATAGTATCCTA 59.341 44.000 3.81 0.00 31.25 2.94
104 105 5.984695 TGGCATGTCTCATAGTATCCTAC 57.015 43.478 0.00 0.00 0.00 3.18
105 106 5.393866 TGGCATGTCTCATAGTATCCTACA 58.606 41.667 0.00 0.00 0.00 2.74
106 107 5.478332 TGGCATGTCTCATAGTATCCTACAG 59.522 44.000 0.00 0.00 0.00 2.74
107 108 5.105554 GGCATGTCTCATAGTATCCTACAGG 60.106 48.000 0.00 0.00 0.00 4.00
124 125 7.885297 TCCTACAGGATTTGAAAGAATGTTTG 58.115 34.615 0.00 0.00 39.78 2.93
125 126 7.723616 TCCTACAGGATTTGAAAGAATGTTTGA 59.276 33.333 0.00 0.00 39.78 2.69
126 127 8.526147 CCTACAGGATTTGAAAGAATGTTTGAT 58.474 33.333 0.00 0.00 37.39 2.57
129 130 8.031277 ACAGGATTTGAAAGAATGTTTGATAGC 58.969 33.333 0.00 0.00 0.00 2.97
130 131 7.219535 CAGGATTTGAAAGAATGTTTGATAGCG 59.780 37.037 0.00 0.00 0.00 4.26
131 132 6.020360 GGATTTGAAAGAATGTTTGATAGCGC 60.020 38.462 0.00 0.00 0.00 5.92
132 133 4.002267 TGAAAGAATGTTTGATAGCGCG 57.998 40.909 0.00 0.00 0.00 6.86
133 134 3.181511 TGAAAGAATGTTTGATAGCGCGG 60.182 43.478 8.83 0.00 0.00 6.46
134 135 1.299541 AGAATGTTTGATAGCGCGGG 58.700 50.000 8.83 0.00 0.00 6.13
135 136 0.307760 GAATGTTTGATAGCGCGGGG 59.692 55.000 8.83 0.00 0.00 5.73
136 137 0.107410 AATGTTTGATAGCGCGGGGA 60.107 50.000 8.83 0.00 0.00 4.81
137 138 0.107410 ATGTTTGATAGCGCGGGGAA 60.107 50.000 8.83 0.00 0.00 3.97
138 139 0.321741 TGTTTGATAGCGCGGGGAAA 60.322 50.000 8.83 0.00 0.00 3.13
139 140 0.806241 GTTTGATAGCGCGGGGAAAA 59.194 50.000 8.83 0.00 0.00 2.29
140 141 0.806241 TTTGATAGCGCGGGGAAAAC 59.194 50.000 8.83 0.00 0.00 2.43
141 142 0.321741 TTGATAGCGCGGGGAAAACA 60.322 50.000 8.83 0.00 0.00 2.83
142 143 0.321741 TGATAGCGCGGGGAAAACAA 60.322 50.000 8.83 0.00 0.00 2.83
143 144 0.806241 GATAGCGCGGGGAAAACAAA 59.194 50.000 8.83 0.00 0.00 2.83
144 145 0.808755 ATAGCGCGGGGAAAACAAAG 59.191 50.000 8.83 0.00 0.00 2.77
145 146 1.238625 TAGCGCGGGGAAAACAAAGG 61.239 55.000 8.83 0.00 0.00 3.11
146 147 2.557372 GCGCGGGGAAAACAAAGGA 61.557 57.895 8.83 0.00 0.00 3.36
147 148 2.034607 CGCGGGGAAAACAAAGGAA 58.965 52.632 0.00 0.00 0.00 3.36
148 149 0.601057 CGCGGGGAAAACAAAGGAAT 59.399 50.000 0.00 0.00 0.00 3.01
149 150 1.000394 CGCGGGGAAAACAAAGGAATT 60.000 47.619 0.00 0.00 0.00 2.17
150 151 2.683968 GCGGGGAAAACAAAGGAATTC 58.316 47.619 0.00 0.00 0.00 2.17
151 152 2.299013 GCGGGGAAAACAAAGGAATTCT 59.701 45.455 5.23 0.00 0.00 2.40
152 153 3.508402 GCGGGGAAAACAAAGGAATTCTA 59.492 43.478 5.23 0.00 0.00 2.10
153 154 4.617530 GCGGGGAAAACAAAGGAATTCTAC 60.618 45.833 5.23 0.00 0.00 2.59
154 155 4.521256 CGGGGAAAACAAAGGAATTCTACA 59.479 41.667 5.23 0.00 0.00 2.74
155 156 5.010213 CGGGGAAAACAAAGGAATTCTACAA 59.990 40.000 5.23 0.00 0.00 2.41
156 157 6.461788 CGGGGAAAACAAAGGAATTCTACAAA 60.462 38.462 5.23 0.00 0.00 2.83
157 158 7.276658 GGGGAAAACAAAGGAATTCTACAAAA 58.723 34.615 5.23 0.00 0.00 2.44
158 159 7.771361 GGGGAAAACAAAGGAATTCTACAAAAA 59.229 33.333 5.23 0.00 0.00 1.94
159 160 8.826710 GGGAAAACAAAGGAATTCTACAAAAAG 58.173 33.333 5.23 0.00 0.00 2.27
160 161 8.826710 GGAAAACAAAGGAATTCTACAAAAAGG 58.173 33.333 5.23 0.00 0.00 3.11
161 162 9.378551 GAAAACAAAGGAATTCTACAAAAAGGT 57.621 29.630 5.23 0.00 0.00 3.50
162 163 9.733556 AAAACAAAGGAATTCTACAAAAAGGTT 57.266 25.926 5.23 0.00 0.00 3.50
163 164 9.733556 AAACAAAGGAATTCTACAAAAAGGTTT 57.266 25.926 5.23 2.49 0.00 3.27
165 166 8.536175 ACAAAGGAATTCTACAAAAAGGTTTGA 58.464 29.630 5.23 0.00 45.99 2.69
166 167 9.034544 CAAAGGAATTCTACAAAAAGGTTTGAG 57.965 33.333 5.23 0.71 45.99 3.02
167 168 7.898014 AGGAATTCTACAAAAAGGTTTGAGT 57.102 32.000 5.23 0.00 45.99 3.41
168 169 7.716612 AGGAATTCTACAAAAAGGTTTGAGTG 58.283 34.615 5.23 0.00 45.99 3.51
169 170 6.923508 GGAATTCTACAAAAAGGTTTGAGTGG 59.076 38.462 5.23 0.00 45.99 4.00
170 171 7.201875 GGAATTCTACAAAAAGGTTTGAGTGGA 60.202 37.037 5.23 0.00 45.99 4.02
171 172 7.839680 ATTCTACAAAAAGGTTTGAGTGGAT 57.160 32.000 6.21 0.00 45.99 3.41
172 173 6.633500 TCTACAAAAAGGTTTGAGTGGATG 57.367 37.500 6.21 0.00 45.99 3.51
173 174 4.670896 ACAAAAAGGTTTGAGTGGATGG 57.329 40.909 6.21 0.00 45.99 3.51
174 175 4.285863 ACAAAAAGGTTTGAGTGGATGGA 58.714 39.130 6.21 0.00 45.99 3.41
175 176 4.714308 ACAAAAAGGTTTGAGTGGATGGAA 59.286 37.500 6.21 0.00 45.99 3.53
176 177 5.188751 ACAAAAAGGTTTGAGTGGATGGAAA 59.811 36.000 6.21 0.00 45.99 3.13
177 178 6.126796 ACAAAAAGGTTTGAGTGGATGGAAAT 60.127 34.615 6.21 0.00 45.99 2.17
178 179 6.499106 AAAAGGTTTGAGTGGATGGAAATT 57.501 33.333 0.00 0.00 0.00 1.82
179 180 6.499106 AAAGGTTTGAGTGGATGGAAATTT 57.501 33.333 0.00 0.00 0.00 1.82
180 181 6.499106 AAGGTTTGAGTGGATGGAAATTTT 57.501 33.333 0.00 0.00 0.00 1.82
181 182 6.101650 AGGTTTGAGTGGATGGAAATTTTC 57.898 37.500 0.24 0.24 0.00 2.29
250 251 7.658179 GATGCTAATCCTATGAATCAAACGA 57.342 36.000 0.00 0.00 0.00 3.85
251 252 7.664082 ATGCTAATCCTATGAATCAAACGAG 57.336 36.000 0.00 0.00 0.00 4.18
252 253 5.466728 TGCTAATCCTATGAATCAAACGAGC 59.533 40.000 0.00 0.00 0.00 5.03
253 254 5.466728 GCTAATCCTATGAATCAAACGAGCA 59.533 40.000 0.00 0.00 0.00 4.26
254 255 6.148480 GCTAATCCTATGAATCAAACGAGCAT 59.852 38.462 0.00 0.00 0.00 3.79
255 256 6.551385 AATCCTATGAATCAAACGAGCATC 57.449 37.500 0.00 0.00 0.00 3.91
256 257 5.022282 TCCTATGAATCAAACGAGCATCA 57.978 39.130 0.00 0.00 33.17 3.07
257 258 4.811024 TCCTATGAATCAAACGAGCATCAC 59.189 41.667 0.00 0.00 33.17 3.06
258 259 4.571984 CCTATGAATCAAACGAGCATCACA 59.428 41.667 0.00 0.00 33.17 3.58
259 260 4.611310 ATGAATCAAACGAGCATCACAG 57.389 40.909 0.00 0.00 33.17 3.66
260 261 2.743664 TGAATCAAACGAGCATCACAGG 59.256 45.455 0.00 0.00 33.17 4.00
261 262 2.768253 ATCAAACGAGCATCACAGGA 57.232 45.000 0.00 0.00 33.17 3.86
262 263 2.542020 TCAAACGAGCATCACAGGAA 57.458 45.000 0.00 0.00 33.17 3.36
263 264 2.844946 TCAAACGAGCATCACAGGAAA 58.155 42.857 0.00 0.00 33.17 3.13
264 265 3.411446 TCAAACGAGCATCACAGGAAAT 58.589 40.909 0.00 0.00 33.17 2.17
265 266 4.574892 TCAAACGAGCATCACAGGAAATA 58.425 39.130 0.00 0.00 33.17 1.40
266 267 5.185454 TCAAACGAGCATCACAGGAAATAT 58.815 37.500 0.00 0.00 33.17 1.28
267 268 5.647658 TCAAACGAGCATCACAGGAAATATT 59.352 36.000 0.00 0.00 33.17 1.28
268 269 5.741388 AACGAGCATCACAGGAAATATTC 57.259 39.130 0.00 0.00 33.17 1.75
269 270 4.130118 ACGAGCATCACAGGAAATATTCC 58.870 43.478 0.75 0.75 42.55 3.01
285 286 9.656323 GGAAATATTCCTAAGGGTTTAAATCCT 57.344 33.333 14.63 14.63 46.57 3.24
287 288 9.656323 AAATATTCCTAAGGGTTTAAATCCTCC 57.344 33.333 20.42 2.17 39.03 4.30
288 289 6.668133 ATTCCTAAGGGTTTAAATCCTCCA 57.332 37.500 20.42 10.51 39.03 3.86
289 290 6.471942 TTCCTAAGGGTTTAAATCCTCCAA 57.528 37.500 20.42 8.46 39.03 3.53
290 291 6.471942 TCCTAAGGGTTTAAATCCTCCAAA 57.528 37.500 20.42 4.69 39.03 3.28
291 292 6.865520 TCCTAAGGGTTTAAATCCTCCAAAA 58.134 36.000 20.42 3.32 39.03 2.44
292 293 7.306781 TCCTAAGGGTTTAAATCCTCCAAAAA 58.693 34.615 20.42 2.31 39.03 1.94
293 294 7.959152 TCCTAAGGGTTTAAATCCTCCAAAAAT 59.041 33.333 20.42 5.71 39.03 1.82
294 295 8.258007 CCTAAGGGTTTAAATCCTCCAAAAATC 58.742 37.037 20.42 0.00 39.03 2.17
295 296 6.620877 AGGGTTTAAATCCTCCAAAAATCC 57.379 37.500 14.63 0.00 32.95 3.01
296 297 6.331032 AGGGTTTAAATCCTCCAAAAATCCT 58.669 36.000 14.63 0.00 32.95 3.24
297 298 7.483881 AGGGTTTAAATCCTCCAAAAATCCTA 58.516 34.615 14.63 0.00 38.56 2.94
298 299 8.129001 AGGGTTTAAATCCTCCAAAAATCCTAT 58.871 33.333 14.63 0.00 38.56 2.57
299 300 8.204160 GGGTTTAAATCCTCCAAAAATCCTATG 58.796 37.037 10.45 0.00 29.45 2.23
300 301 7.710907 GGTTTAAATCCTCCAAAAATCCTATGC 59.289 37.037 0.00 0.00 0.00 3.14
301 302 7.969690 TTAAATCCTCCAAAAATCCTATGCA 57.030 32.000 0.00 0.00 0.00 3.96
302 303 6.872585 AAATCCTCCAAAAATCCTATGCAA 57.127 33.333 0.00 0.00 0.00 4.08
303 304 7.441903 AAATCCTCCAAAAATCCTATGCAAT 57.558 32.000 0.00 0.00 0.00 3.56
304 305 7.441903 AATCCTCCAAAAATCCTATGCAATT 57.558 32.000 0.00 0.00 0.00 2.32
305 306 6.469782 TCCTCCAAAAATCCTATGCAATTC 57.530 37.500 0.00 0.00 0.00 2.17
306 307 5.363580 TCCTCCAAAAATCCTATGCAATTCC 59.636 40.000 0.00 0.00 0.00 3.01
307 308 5.364735 CCTCCAAAAATCCTATGCAATTCCT 59.635 40.000 0.00 0.00 0.00 3.36
308 309 6.126968 CCTCCAAAAATCCTATGCAATTCCTT 60.127 38.462 0.00 0.00 0.00 3.36
309 310 7.256494 TCCAAAAATCCTATGCAATTCCTTT 57.744 32.000 0.00 0.00 0.00 3.11
310 311 7.104939 TCCAAAAATCCTATGCAATTCCTTTG 58.895 34.615 0.00 0.00 38.43 2.77
311 312 7.038445 TCCAAAAATCCTATGCAATTCCTTTGA 60.038 33.333 0.00 0.00 37.53 2.69
312 313 7.607223 CCAAAAATCCTATGCAATTCCTTTGAA 59.393 33.333 0.00 0.00 37.53 2.69
313 314 9.169592 CAAAAATCCTATGCAATTCCTTTGAAT 57.830 29.630 0.00 0.00 43.08 2.57
314 315 8.953368 AAAATCCTATGCAATTCCTTTGAATC 57.047 30.769 0.00 0.00 40.34 2.52
315 316 7.664552 AATCCTATGCAATTCCTTTGAATCA 57.335 32.000 0.00 0.00 40.34 2.57
316 317 7.664552 ATCCTATGCAATTCCTTTGAATCAA 57.335 32.000 0.00 0.00 40.34 2.57
317 318 7.479352 TCCTATGCAATTCCTTTGAATCAAA 57.521 32.000 8.25 8.25 40.34 2.69
327 328 4.446994 CTTTGAATCAAAGGAGCCCTTC 57.553 45.455 23.96 0.00 43.92 3.46
328 329 3.524095 TTGAATCAAAGGAGCCCTTCA 57.476 42.857 6.91 0.00 43.92 3.02
329 330 3.744940 TGAATCAAAGGAGCCCTTCAT 57.255 42.857 6.91 1.18 43.92 2.57
330 331 4.860802 TGAATCAAAGGAGCCCTTCATA 57.139 40.909 6.91 0.00 43.92 2.15
331 332 4.785301 TGAATCAAAGGAGCCCTTCATAG 58.215 43.478 6.91 0.14 43.92 2.23
332 333 3.872459 ATCAAAGGAGCCCTTCATAGG 57.128 47.619 6.91 0.00 43.92 2.57
333 334 2.845659 TCAAAGGAGCCCTTCATAGGA 58.154 47.619 6.91 0.00 43.92 2.94
334 335 3.189606 TCAAAGGAGCCCTTCATAGGAA 58.810 45.455 6.91 0.00 43.92 3.36
335 336 3.591527 TCAAAGGAGCCCTTCATAGGAAA 59.408 43.478 6.91 0.00 43.92 3.13
336 337 4.230502 TCAAAGGAGCCCTTCATAGGAAAT 59.769 41.667 6.91 0.00 43.92 2.17
337 338 4.888626 AAGGAGCCCTTCATAGGAAATT 57.111 40.909 0.99 0.00 40.17 1.82
338 339 4.888626 AGGAGCCCTTCATAGGAAATTT 57.111 40.909 0.00 0.00 45.05 1.82
339 340 5.994416 AGGAGCCCTTCATAGGAAATTTA 57.006 39.130 0.00 0.00 45.05 1.40
340 341 6.341408 AGGAGCCCTTCATAGGAAATTTAA 57.659 37.500 0.00 0.00 45.05 1.52
341 342 6.129874 AGGAGCCCTTCATAGGAAATTTAAC 58.870 40.000 0.00 0.00 45.05 2.01
342 343 5.891551 GGAGCCCTTCATAGGAAATTTAACA 59.108 40.000 0.00 0.00 45.05 2.41
343 344 6.551227 GGAGCCCTTCATAGGAAATTTAACAT 59.449 38.462 0.00 0.00 45.05 2.71
344 345 7.255625 GGAGCCCTTCATAGGAAATTTAACATC 60.256 40.741 0.00 0.00 45.05 3.06
345 346 6.551227 AGCCCTTCATAGGAAATTTAACATCC 59.449 38.462 0.00 0.00 45.05 3.51
346 347 6.323739 GCCCTTCATAGGAAATTTAACATCCA 59.676 38.462 0.00 0.00 45.05 3.41
347 348 7.684428 GCCCTTCATAGGAAATTTAACATCCAC 60.684 40.741 0.00 0.00 45.05 4.02
348 349 7.561356 CCCTTCATAGGAAATTTAACATCCACT 59.439 37.037 0.00 0.00 45.05 4.00
349 350 8.971073 CCTTCATAGGAAATTTAACATCCACTT 58.029 33.333 0.00 0.00 45.05 3.16
351 352 9.527157 TTCATAGGAAATTTAACATCCACTTCA 57.473 29.630 0.00 0.00 35.62 3.02
352 353 9.527157 TCATAGGAAATTTAACATCCACTTCAA 57.473 29.630 0.00 0.00 35.62 2.69
353 354 9.573133 CATAGGAAATTTAACATCCACTTCAAC 57.427 33.333 0.00 0.00 35.62 3.18
354 355 6.993079 AGGAAATTTAACATCCACTTCAACC 58.007 36.000 0.00 0.00 35.62 3.77
355 356 6.782494 AGGAAATTTAACATCCACTTCAACCT 59.218 34.615 0.00 0.00 35.62 3.50
356 357 7.039714 AGGAAATTTAACATCCACTTCAACCTC 60.040 37.037 0.00 0.00 35.62 3.85
357 358 7.039714 GGAAATTTAACATCCACTTCAACCTCT 60.040 37.037 0.00 0.00 33.30 3.69
358 359 7.839680 AATTTAACATCCACTTCAACCTCTT 57.160 32.000 0.00 0.00 0.00 2.85
359 360 7.839680 ATTTAACATCCACTTCAACCTCTTT 57.160 32.000 0.00 0.00 0.00 2.52
360 361 7.654022 TTTAACATCCACTTCAACCTCTTTT 57.346 32.000 0.00 0.00 0.00 2.27
361 362 7.654022 TTAACATCCACTTCAACCTCTTTTT 57.346 32.000 0.00 0.00 0.00 1.94
362 363 8.754991 TTAACATCCACTTCAACCTCTTTTTA 57.245 30.769 0.00 0.00 0.00 1.52
363 364 6.635030 ACATCCACTTCAACCTCTTTTTAC 57.365 37.500 0.00 0.00 0.00 2.01
364 365 6.126409 ACATCCACTTCAACCTCTTTTTACA 58.874 36.000 0.00 0.00 0.00 2.41
365 366 6.605594 ACATCCACTTCAACCTCTTTTTACAA 59.394 34.615 0.00 0.00 0.00 2.41
366 367 7.287696 ACATCCACTTCAACCTCTTTTTACAAT 59.712 33.333 0.00 0.00 0.00 2.71
367 368 7.654022 TCCACTTCAACCTCTTTTTACAATT 57.346 32.000 0.00 0.00 0.00 2.32
368 369 7.712797 TCCACTTCAACCTCTTTTTACAATTC 58.287 34.615 0.00 0.00 0.00 2.17
369 370 6.923508 CCACTTCAACCTCTTTTTACAATTCC 59.076 38.462 0.00 0.00 0.00 3.01
370 371 7.201911 CCACTTCAACCTCTTTTTACAATTCCT 60.202 37.037 0.00 0.00 0.00 3.36
371 372 8.197439 CACTTCAACCTCTTTTTACAATTCCTT 58.803 33.333 0.00 0.00 0.00 3.36
372 373 8.758829 ACTTCAACCTCTTTTTACAATTCCTTT 58.241 29.630 0.00 0.00 0.00 3.11
373 374 8.940768 TTCAACCTCTTTTTACAATTCCTTTG 57.059 30.769 0.00 0.00 41.36 2.77
375 376 8.536175 TCAACCTCTTTTTACAATTCCTTTGTT 58.464 29.630 0.00 0.00 46.51 2.83
376 377 9.161629 CAACCTCTTTTTACAATTCCTTTGTTT 57.838 29.630 0.00 0.00 46.51 2.83
377 378 9.733556 AACCTCTTTTTACAATTCCTTTGTTTT 57.266 25.926 0.00 0.00 46.51 2.43
378 379 9.733556 ACCTCTTTTTACAATTCCTTTGTTTTT 57.266 25.926 0.00 0.00 46.51 1.94
381 382 9.168451 TCTTTTTACAATTCCTTTGTTTTTCCC 57.832 29.630 0.00 0.00 46.51 3.97
382 383 7.541122 TTTTACAATTCCTTTGTTTTTCCCG 57.459 32.000 0.00 0.00 46.51 5.14
383 384 4.746535 ACAATTCCTTTGTTTTTCCCGT 57.253 36.364 0.00 0.00 46.51 5.28
384 385 4.438148 ACAATTCCTTTGTTTTTCCCGTG 58.562 39.130 0.00 0.00 46.51 4.94
385 386 4.160626 ACAATTCCTTTGTTTTTCCCGTGA 59.839 37.500 0.00 0.00 46.51 4.35
386 387 3.786516 TTCCTTTGTTTTTCCCGTGAC 57.213 42.857 0.00 0.00 0.00 3.67
387 388 2.724454 TCCTTTGTTTTTCCCGTGACA 58.276 42.857 0.00 0.00 0.00 3.58
388 389 3.292460 TCCTTTGTTTTTCCCGTGACAT 58.708 40.909 0.00 0.00 0.00 3.06
389 390 3.316868 TCCTTTGTTTTTCCCGTGACATC 59.683 43.478 0.00 0.00 0.00 3.06
390 391 3.067461 CCTTTGTTTTTCCCGTGACATCA 59.933 43.478 0.00 0.00 0.00 3.07
391 392 4.440802 CCTTTGTTTTTCCCGTGACATCAA 60.441 41.667 0.00 0.00 0.00 2.57
392 393 4.720649 TTGTTTTTCCCGTGACATCAAA 57.279 36.364 0.00 0.00 0.00 2.69
393 394 4.035278 TGTTTTTCCCGTGACATCAAAC 57.965 40.909 0.00 0.00 0.00 2.93
394 395 3.444034 TGTTTTTCCCGTGACATCAAACA 59.556 39.130 0.00 0.00 31.84 2.83
395 396 4.082190 TGTTTTTCCCGTGACATCAAACAA 60.082 37.500 0.00 0.00 31.47 2.83
396 397 4.927978 TTTTCCCGTGACATCAAACAAT 57.072 36.364 0.00 0.00 0.00 2.71
397 398 4.497473 TTTCCCGTGACATCAAACAATC 57.503 40.909 0.00 0.00 0.00 2.67
398 399 3.133141 TCCCGTGACATCAAACAATCA 57.867 42.857 0.00 0.00 0.00 2.57
399 400 3.684908 TCCCGTGACATCAAACAATCAT 58.315 40.909 0.00 0.00 0.00 2.45
400 401 4.078537 TCCCGTGACATCAAACAATCATT 58.921 39.130 0.00 0.00 0.00 2.57
401 402 4.082841 TCCCGTGACATCAAACAATCATTG 60.083 41.667 0.00 0.00 0.00 2.82
402 403 3.609373 CCGTGACATCAAACAATCATTGC 59.391 43.478 0.00 0.00 0.00 3.56
403 404 4.478699 CGTGACATCAAACAATCATTGCT 58.521 39.130 0.00 0.00 0.00 3.91
404 405 5.391843 CCGTGACATCAAACAATCATTGCTA 60.392 40.000 0.00 0.00 0.00 3.49
405 406 6.085573 CGTGACATCAAACAATCATTGCTAA 58.914 36.000 0.00 0.00 0.00 3.09
406 407 6.748658 CGTGACATCAAACAATCATTGCTAAT 59.251 34.615 0.00 0.00 0.00 1.73
407 408 7.274033 CGTGACATCAAACAATCATTGCTAATT 59.726 33.333 0.00 0.00 0.00 1.40
408 409 8.928733 GTGACATCAAACAATCATTGCTAATTT 58.071 29.630 0.00 0.00 0.00 1.82
409 410 9.491675 TGACATCAAACAATCATTGCTAATTTT 57.508 25.926 0.00 0.00 0.00 1.82
432 433 9.473007 TTTTATAGGATTCAAATGGACATGTCA 57.527 29.630 26.47 13.45 0.00 3.58
433 434 6.949352 ATAGGATTCAAATGGACATGTCAC 57.051 37.500 26.47 16.16 0.00 3.67
434 435 4.927049 AGGATTCAAATGGACATGTCACT 58.073 39.130 26.47 10.64 0.00 3.41
435 436 4.946157 AGGATTCAAATGGACATGTCACTC 59.054 41.667 26.47 10.62 0.00 3.51
436 437 4.096984 GGATTCAAATGGACATGTCACTCC 59.903 45.833 26.47 13.76 0.00 3.85
437 438 3.786368 TCAAATGGACATGTCACTCCA 57.214 42.857 26.47 16.53 40.92 3.86
438 439 4.097551 TCAAATGGACATGTCACTCCAA 57.902 40.909 26.47 5.70 40.05 3.53
439 440 4.665451 TCAAATGGACATGTCACTCCAAT 58.335 39.130 26.47 7.10 40.05 3.16
440 441 4.701651 TCAAATGGACATGTCACTCCAATC 59.298 41.667 26.47 7.76 40.05 2.67
441 442 2.787473 TGGACATGTCACTCCAATCC 57.213 50.000 26.47 7.77 33.39 3.01
442 443 2.269023 TGGACATGTCACTCCAATCCT 58.731 47.619 26.47 0.00 33.39 3.24
443 444 3.449918 TGGACATGTCACTCCAATCCTA 58.550 45.455 26.47 0.00 33.39 2.94
444 445 4.040047 TGGACATGTCACTCCAATCCTAT 58.960 43.478 26.47 0.00 33.39 2.57
445 446 5.215845 TGGACATGTCACTCCAATCCTATA 58.784 41.667 26.47 0.00 33.39 1.31
446 447 5.070446 TGGACATGTCACTCCAATCCTATAC 59.930 44.000 26.47 4.61 33.39 1.47
447 448 5.305644 GGACATGTCACTCCAATCCTATACT 59.694 44.000 26.47 0.00 0.00 2.12
448 449 6.183361 GGACATGTCACTCCAATCCTATACTT 60.183 42.308 26.47 0.00 0.00 2.24
449 450 7.200434 ACATGTCACTCCAATCCTATACTTT 57.800 36.000 0.00 0.00 0.00 2.66
450 451 7.633789 ACATGTCACTCCAATCCTATACTTTT 58.366 34.615 0.00 0.00 0.00 2.27
451 452 8.109634 ACATGTCACTCCAATCCTATACTTTTT 58.890 33.333 0.00 0.00 0.00 1.94
452 453 8.616076 CATGTCACTCCAATCCTATACTTTTTC 58.384 37.037 0.00 0.00 0.00 2.29
453 454 7.918076 TGTCACTCCAATCCTATACTTTTTCT 58.082 34.615 0.00 0.00 0.00 2.52
454 455 9.042450 TGTCACTCCAATCCTATACTTTTTCTA 57.958 33.333 0.00 0.00 0.00 2.10
491 492 6.986904 AAAATCCTACGAATCAAAGAGACC 57.013 37.500 0.00 0.00 0.00 3.85
492 493 4.674281 ATCCTACGAATCAAAGAGACCC 57.326 45.455 0.00 0.00 0.00 4.46
493 494 3.709587 TCCTACGAATCAAAGAGACCCT 58.290 45.455 0.00 0.00 0.00 4.34
494 495 4.094476 TCCTACGAATCAAAGAGACCCTT 58.906 43.478 0.00 0.00 36.47 3.95
495 496 5.266788 TCCTACGAATCAAAGAGACCCTTA 58.733 41.667 0.00 0.00 34.00 2.69
536 537 2.798499 GCTACCGCGAGAATAGCTTCAA 60.798 50.000 8.23 0.00 40.38 2.69
539 540 2.673368 ACCGCGAGAATAGCTTCAAAAG 59.327 45.455 8.23 0.00 33.18 2.27
542 543 4.142902 CCGCGAGAATAGCTTCAAAAGAAA 60.143 41.667 8.23 0.00 33.18 2.52
543 544 5.382303 CGCGAGAATAGCTTCAAAAGAAAA 58.618 37.500 0.00 0.00 33.18 2.29
544 545 5.506138 CGCGAGAATAGCTTCAAAAGAAAAG 59.494 40.000 0.00 0.00 33.18 2.27
545 546 6.603095 GCGAGAATAGCTTCAAAAGAAAAGA 58.397 36.000 0.00 0.00 32.35 2.52
675 676 7.413000 CGTCATGAGATGTTTTCTTAAACCGAT 60.413 37.037 0.00 0.00 42.39 4.18
677 678 6.494893 TGAGATGTTTTCTTAAACCGATGG 57.505 37.500 0.00 0.00 42.39 3.51
697 704 1.990424 TGGTGGACCAGGTATGCTG 59.010 57.895 0.00 0.00 42.01 4.41
723 730 1.112113 ATCTGTAGGTGGGTGCTACG 58.888 55.000 0.00 0.00 0.00 3.51
779 786 4.489771 CCCGGCCACAGCTAAGGG 62.490 72.222 2.24 0.00 40.08 3.95
816 823 2.650778 CCAAAGGCGGGCTTTGTC 59.349 61.111 38.25 2.32 39.42 3.18
817 824 2.199652 CCAAAGGCGGGCTTTGTCA 61.200 57.895 38.25 0.00 39.42 3.58
820 827 2.920076 AAAGGCGGGCTTTGTCACCA 62.920 55.000 26.26 0.00 0.00 4.17
821 828 3.670377 GGCGGGCTTTGTCACCAC 61.670 66.667 0.00 0.00 0.00 4.16
822 829 2.904866 GCGGGCTTTGTCACCACA 60.905 61.111 0.00 0.00 0.00 4.17
823 830 3.030652 CGGGCTTTGTCACCACAC 58.969 61.111 0.00 0.00 29.76 3.82
824 831 2.551912 CGGGCTTTGTCACCACACC 61.552 63.158 0.00 0.00 29.76 4.16
826 833 0.755327 GGGCTTTGTCACCACACCTT 60.755 55.000 0.00 0.00 29.76 3.50
829 836 1.318576 CTTTGTCACCACACCTTCCC 58.681 55.000 0.00 0.00 29.76 3.97
830 837 0.106419 TTTGTCACCACACCTTCCCC 60.106 55.000 0.00 0.00 29.76 4.81
831 838 1.282653 TTGTCACCACACCTTCCCCA 61.283 55.000 0.00 0.00 29.76 4.96
862 869 1.736586 CTTCCCCATCGTCTCTCCG 59.263 63.158 0.00 0.00 0.00 4.63
923 931 7.709182 TCAAAGAAACAGAACGAAGATACAGAA 59.291 33.333 0.00 0.00 0.00 3.02
933 941 0.543749 AGATACAGAAGCCAGCCACC 59.456 55.000 0.00 0.00 0.00 4.61
952 960 1.067495 CCGCCGAGAAGAAGAAGAAGT 60.067 52.381 0.00 0.00 0.00 3.01
1581 1607 3.958860 GTGCTCCAGGTGCAGGGT 61.959 66.667 16.74 0.00 41.41 4.34
1626 1652 0.601311 GCAAGTTCTCCTGTCGCAGT 60.601 55.000 6.19 0.00 0.00 4.40
1660 1686 1.067565 GCTCTCGGTGAGTCATTGTCA 60.068 52.381 8.68 0.00 44.41 3.58
1666 1692 2.610833 CGGTGAGTCATTGTCATCATGG 59.389 50.000 0.00 0.00 0.00 3.66
1714 1743 4.432712 ACAAATGTTGCTTTGTTCTGACC 58.567 39.130 0.00 0.00 44.76 4.02
1790 1819 2.743752 CCGCAACTGGCTGATGTCG 61.744 63.158 0.00 5.15 41.67 4.35
2327 2364 4.912299 ACGGTGGAGGTGGGGGTT 62.912 66.667 0.00 0.00 0.00 4.11
2472 2509 1.511768 GACCTACTGCGGTGAGGAC 59.488 63.158 21.17 14.34 37.42 3.85
2915 2952 6.752815 GGTGTTCTTGTTTTAAAATCCGTCAA 59.247 34.615 3.52 2.73 0.00 3.18
3027 6565 1.208535 TGTGTGTGTTCCGAACTTCCT 59.791 47.619 12.43 0.00 0.00 3.36
3052 6590 5.827666 TCGTCCTTCCAGTTTCAATTTTTC 58.172 37.500 0.00 0.00 0.00 2.29
3057 6597 8.604035 GTCCTTCCAGTTTCAATTTTTCTTTTC 58.396 33.333 0.00 0.00 0.00 2.29
3092 6632 2.530701 AGGAGTGAAGAACCGATGTCT 58.469 47.619 0.00 0.00 0.00 3.41
3095 6635 4.712337 AGGAGTGAAGAACCGATGTCTTAT 59.288 41.667 0.00 0.00 0.00 1.73
3122 6696 2.508867 CCGTTGCAGAATGAATCGTTG 58.491 47.619 0.00 0.00 39.69 4.10
3159 6733 4.357918 AGAGCTTCTCTTTTTAGTGCCA 57.642 40.909 0.00 0.00 37.60 4.92
3160 6734 4.068599 AGAGCTTCTCTTTTTAGTGCCAC 58.931 43.478 0.00 0.00 37.60 5.01
3161 6735 4.068599 GAGCTTCTCTTTTTAGTGCCACT 58.931 43.478 1.54 1.54 0.00 4.00
3162 6736 5.012148 AGAGCTTCTCTTTTTAGTGCCACTA 59.988 40.000 0.00 0.00 37.60 2.74
3163 6737 5.241662 AGCTTCTCTTTTTAGTGCCACTAG 58.758 41.667 4.51 0.00 31.47 2.57
3197 6777 7.987750 TGAGTTGTATTGGTAGTATTTTGCA 57.012 32.000 0.00 0.00 0.00 4.08
3202 6782 7.436430 TGTATTGGTAGTATTTTGCAACGAA 57.564 32.000 0.00 0.00 0.00 3.85
3225 6805 1.512156 ATTTGTTGGGGTCGACGCAC 61.512 55.000 30.51 21.89 42.25 5.34
3239 8173 4.303257 GCACTGGTAGAAGTGGGC 57.697 61.111 6.48 0.00 46.34 5.36
3297 8232 2.531942 AAAAGAGGCGGGAGGGGT 60.532 61.111 0.00 0.00 0.00 4.95
3298 8233 2.821679 GAAAAGAGGCGGGAGGGGTG 62.822 65.000 0.00 0.00 0.00 4.61
3299 8234 3.864983 AAAGAGGCGGGAGGGGTGA 62.865 63.158 0.00 0.00 0.00 4.02
3345 8282 2.012673 GCACATGGGATGTCTTCTCAC 58.987 52.381 0.00 0.00 42.70 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.753921 CCCGAAATGTAGTACAGAAGATTCC 59.246 44.000 9.25 0.00 0.00 3.01
1 2 5.234543 GCCCGAAATGTAGTACAGAAGATTC 59.765 44.000 9.25 7.16 0.00 2.52
2 3 5.116882 GCCCGAAATGTAGTACAGAAGATT 58.883 41.667 9.25 0.00 0.00 2.40
3 4 4.443034 GGCCCGAAATGTAGTACAGAAGAT 60.443 45.833 9.25 0.00 0.00 2.40
4 5 3.118884 GGCCCGAAATGTAGTACAGAAGA 60.119 47.826 9.25 0.00 0.00 2.87
5 6 3.118738 AGGCCCGAAATGTAGTACAGAAG 60.119 47.826 9.25 0.67 0.00 2.85
6 7 2.835764 AGGCCCGAAATGTAGTACAGAA 59.164 45.455 9.25 0.00 0.00 3.02
7 8 2.429610 GAGGCCCGAAATGTAGTACAGA 59.570 50.000 9.25 0.00 0.00 3.41
8 9 2.431057 AGAGGCCCGAAATGTAGTACAG 59.569 50.000 9.25 0.00 0.00 2.74
9 10 2.463752 AGAGGCCCGAAATGTAGTACA 58.536 47.619 5.24 5.24 0.00 2.90
10 11 3.538634 AAGAGGCCCGAAATGTAGTAC 57.461 47.619 0.00 0.00 0.00 2.73
11 12 3.516300 TCAAAGAGGCCCGAAATGTAGTA 59.484 43.478 0.00 0.00 0.00 1.82
12 13 2.304761 TCAAAGAGGCCCGAAATGTAGT 59.695 45.455 0.00 0.00 0.00 2.73
13 14 2.985896 TCAAAGAGGCCCGAAATGTAG 58.014 47.619 0.00 0.00 0.00 2.74
14 15 3.644966 ATCAAAGAGGCCCGAAATGTA 57.355 42.857 0.00 0.00 0.00 2.29
15 16 2.514458 ATCAAAGAGGCCCGAAATGT 57.486 45.000 0.00 0.00 0.00 2.71
16 17 2.754552 TGAATCAAAGAGGCCCGAAATG 59.245 45.455 0.00 0.00 0.00 2.32
17 18 2.755103 GTGAATCAAAGAGGCCCGAAAT 59.245 45.455 0.00 0.00 0.00 2.17
18 19 2.159382 GTGAATCAAAGAGGCCCGAAA 58.841 47.619 0.00 0.00 0.00 3.46
19 20 1.073125 TGTGAATCAAAGAGGCCCGAA 59.927 47.619 0.00 0.00 0.00 4.30
20 21 0.690192 TGTGAATCAAAGAGGCCCGA 59.310 50.000 0.00 0.00 0.00 5.14
21 22 1.089920 CTGTGAATCAAAGAGGCCCG 58.910 55.000 0.00 0.00 0.00 6.13
22 23 1.004745 TCCTGTGAATCAAAGAGGCCC 59.995 52.381 1.15 0.00 0.00 5.80
23 24 2.496899 TCCTGTGAATCAAAGAGGCC 57.503 50.000 1.15 0.00 0.00 5.19
24 25 3.760684 ACAATCCTGTGAATCAAAGAGGC 59.239 43.478 1.15 0.00 33.30 4.70
25 26 5.005740 TGACAATCCTGTGAATCAAAGAGG 58.994 41.667 1.15 0.05 35.30 3.69
26 27 6.564709 TTGACAATCCTGTGAATCAAAGAG 57.435 37.500 1.15 0.00 35.30 2.85
27 28 6.957920 TTTGACAATCCTGTGAATCAAAGA 57.042 33.333 1.15 0.00 35.30 2.52
28 29 7.868922 TCATTTTGACAATCCTGTGAATCAAAG 59.131 33.333 0.00 0.00 35.30 2.77
29 30 7.724287 TCATTTTGACAATCCTGTGAATCAAA 58.276 30.769 0.00 0.00 35.30 2.69
30 31 7.287512 TCATTTTGACAATCCTGTGAATCAA 57.712 32.000 0.00 0.00 35.30 2.57
31 32 6.897706 TCATTTTGACAATCCTGTGAATCA 57.102 33.333 0.00 0.00 35.30 2.57
32 33 6.810182 CCTTCATTTTGACAATCCTGTGAATC 59.190 38.462 0.00 0.00 35.30 2.52
33 34 6.494491 TCCTTCATTTTGACAATCCTGTGAAT 59.506 34.615 0.00 0.00 35.30 2.57
34 35 5.832595 TCCTTCATTTTGACAATCCTGTGAA 59.167 36.000 0.00 0.00 35.30 3.18
35 36 5.384336 TCCTTCATTTTGACAATCCTGTGA 58.616 37.500 0.00 0.00 35.30 3.58
36 37 5.710513 TCCTTCATTTTGACAATCCTGTG 57.289 39.130 0.00 0.00 35.30 3.66
37 38 6.923199 ATTCCTTCATTTTGACAATCCTGT 57.077 33.333 0.00 0.00 38.98 4.00
38 39 7.340232 TCCTATTCCTTCATTTTGACAATCCTG 59.660 37.037 0.00 0.00 0.00 3.86
39 40 7.413446 TCCTATTCCTTCATTTTGACAATCCT 58.587 34.615 0.00 0.00 0.00 3.24
40 41 7.645058 TCCTATTCCTTCATTTTGACAATCC 57.355 36.000 0.00 0.00 0.00 3.01
41 42 9.927668 TTTTCCTATTCCTTCATTTTGACAATC 57.072 29.630 0.00 0.00 0.00 2.67
44 45 9.709495 CATTTTTCCTATTCCTTCATTTTGACA 57.291 29.630 0.00 0.00 0.00 3.58
45 46 8.659491 GCATTTTTCCTATTCCTTCATTTTGAC 58.341 33.333 0.00 0.00 0.00 3.18
46 47 8.373981 TGCATTTTTCCTATTCCTTCATTTTGA 58.626 29.630 0.00 0.00 0.00 2.69
47 48 8.550710 TGCATTTTTCCTATTCCTTCATTTTG 57.449 30.769 0.00 0.00 0.00 2.44
48 49 8.596293 TCTGCATTTTTCCTATTCCTTCATTTT 58.404 29.630 0.00 0.00 0.00 1.82
49 50 8.137745 TCTGCATTTTTCCTATTCCTTCATTT 57.862 30.769 0.00 0.00 0.00 2.32
50 51 7.722949 TCTGCATTTTTCCTATTCCTTCATT 57.277 32.000 0.00 0.00 0.00 2.57
51 52 7.722949 TTCTGCATTTTTCCTATTCCTTCAT 57.277 32.000 0.00 0.00 0.00 2.57
52 53 7.537596 TTTCTGCATTTTTCCTATTCCTTCA 57.462 32.000 0.00 0.00 0.00 3.02
53 54 9.741647 CTATTTCTGCATTTTTCCTATTCCTTC 57.258 33.333 0.00 0.00 0.00 3.46
54 55 8.699130 CCTATTTCTGCATTTTTCCTATTCCTT 58.301 33.333 0.00 0.00 0.00 3.36
55 56 8.061304 TCCTATTTCTGCATTTTTCCTATTCCT 58.939 33.333 0.00 0.00 0.00 3.36
56 57 8.237811 TCCTATTTCTGCATTTTTCCTATTCC 57.762 34.615 0.00 0.00 0.00 3.01
57 58 9.688592 CATCCTATTTCTGCATTTTTCCTATTC 57.311 33.333 0.00 0.00 0.00 1.75
58 59 8.645110 CCATCCTATTTCTGCATTTTTCCTATT 58.355 33.333 0.00 0.00 0.00 1.73
59 60 7.256083 GCCATCCTATTTCTGCATTTTTCCTAT 60.256 37.037 0.00 0.00 0.00 2.57
60 61 6.040842 GCCATCCTATTTCTGCATTTTTCCTA 59.959 38.462 0.00 0.00 0.00 2.94
61 62 5.163374 GCCATCCTATTTCTGCATTTTTCCT 60.163 40.000 0.00 0.00 0.00 3.36
62 63 5.052481 GCCATCCTATTTCTGCATTTTTCC 58.948 41.667 0.00 0.00 0.00 3.13
63 64 5.663456 TGCCATCCTATTTCTGCATTTTTC 58.337 37.500 0.00 0.00 0.00 2.29
64 65 5.680594 TGCCATCCTATTTCTGCATTTTT 57.319 34.783 0.00 0.00 0.00 1.94
65 66 5.129815 ACATGCCATCCTATTTCTGCATTTT 59.870 36.000 0.00 0.00 37.34 1.82
66 67 4.652421 ACATGCCATCCTATTTCTGCATTT 59.348 37.500 0.00 0.00 37.34 2.32
67 68 4.220724 ACATGCCATCCTATTTCTGCATT 58.779 39.130 0.00 0.00 37.34 3.56
68 69 3.825014 GACATGCCATCCTATTTCTGCAT 59.175 43.478 0.00 0.00 39.84 3.96
69 70 3.117776 AGACATGCCATCCTATTTCTGCA 60.118 43.478 0.00 0.00 0.00 4.41
70 71 3.484407 AGACATGCCATCCTATTTCTGC 58.516 45.455 0.00 0.00 0.00 4.26
71 72 4.711399 TGAGACATGCCATCCTATTTCTG 58.289 43.478 0.00 0.00 0.00 3.02
72 73 5.579753 ATGAGACATGCCATCCTATTTCT 57.420 39.130 0.00 0.00 0.00 2.52
73 74 6.471146 ACTATGAGACATGCCATCCTATTTC 58.529 40.000 0.00 0.00 0.00 2.17
74 75 6.445451 ACTATGAGACATGCCATCCTATTT 57.555 37.500 0.00 0.00 0.00 1.40
75 76 7.147585 GGATACTATGAGACATGCCATCCTATT 60.148 40.741 0.00 0.00 0.00 1.73
76 77 6.326064 GGATACTATGAGACATGCCATCCTAT 59.674 42.308 0.00 0.00 0.00 2.57
77 78 5.658634 GGATACTATGAGACATGCCATCCTA 59.341 44.000 0.00 0.00 0.00 2.94
78 79 4.469227 GGATACTATGAGACATGCCATCCT 59.531 45.833 0.00 0.00 0.00 3.24
79 80 4.764172 GGATACTATGAGACATGCCATCC 58.236 47.826 0.00 0.00 0.00 3.51
100 101 7.885297 TCAAACATTCTTTCAAATCCTGTAGG 58.115 34.615 0.00 0.00 0.00 3.18
103 104 8.031277 GCTATCAAACATTCTTTCAAATCCTGT 58.969 33.333 0.00 0.00 0.00 4.00
104 105 7.219535 CGCTATCAAACATTCTTTCAAATCCTG 59.780 37.037 0.00 0.00 0.00 3.86
105 106 7.253422 CGCTATCAAACATTCTTTCAAATCCT 58.747 34.615 0.00 0.00 0.00 3.24
106 107 6.020360 GCGCTATCAAACATTCTTTCAAATCC 60.020 38.462 0.00 0.00 0.00 3.01
107 108 6.290748 CGCGCTATCAAACATTCTTTCAAATC 60.291 38.462 5.56 0.00 0.00 2.17
108 109 5.512788 CGCGCTATCAAACATTCTTTCAAAT 59.487 36.000 5.56 0.00 0.00 2.32
109 110 4.851014 CGCGCTATCAAACATTCTTTCAAA 59.149 37.500 5.56 0.00 0.00 2.69
110 111 4.402583 CGCGCTATCAAACATTCTTTCAA 58.597 39.130 5.56 0.00 0.00 2.69
111 112 3.181511 CCGCGCTATCAAACATTCTTTCA 60.182 43.478 5.56 0.00 0.00 2.69
112 113 3.354397 CCGCGCTATCAAACATTCTTTC 58.646 45.455 5.56 0.00 0.00 2.62
113 114 2.097466 CCCGCGCTATCAAACATTCTTT 59.903 45.455 5.56 0.00 0.00 2.52
114 115 1.670811 CCCGCGCTATCAAACATTCTT 59.329 47.619 5.56 0.00 0.00 2.52
115 116 1.299541 CCCGCGCTATCAAACATTCT 58.700 50.000 5.56 0.00 0.00 2.40
116 117 0.307760 CCCCGCGCTATCAAACATTC 59.692 55.000 5.56 0.00 0.00 2.67
117 118 0.107410 TCCCCGCGCTATCAAACATT 60.107 50.000 5.56 0.00 0.00 2.71
118 119 0.107410 TTCCCCGCGCTATCAAACAT 60.107 50.000 5.56 0.00 0.00 2.71
119 120 0.321741 TTTCCCCGCGCTATCAAACA 60.322 50.000 5.56 0.00 0.00 2.83
120 121 0.806241 TTTTCCCCGCGCTATCAAAC 59.194 50.000 5.56 0.00 0.00 2.93
121 122 0.806241 GTTTTCCCCGCGCTATCAAA 59.194 50.000 5.56 0.00 0.00 2.69
122 123 0.321741 TGTTTTCCCCGCGCTATCAA 60.322 50.000 5.56 0.00 0.00 2.57
123 124 0.321741 TTGTTTTCCCCGCGCTATCA 60.322 50.000 5.56 0.00 0.00 2.15
124 125 0.806241 TTTGTTTTCCCCGCGCTATC 59.194 50.000 5.56 0.00 0.00 2.08
125 126 0.808755 CTTTGTTTTCCCCGCGCTAT 59.191 50.000 5.56 0.00 0.00 2.97
126 127 1.238625 CCTTTGTTTTCCCCGCGCTA 61.239 55.000 5.56 0.00 0.00 4.26
127 128 2.561037 CCTTTGTTTTCCCCGCGCT 61.561 57.895 5.56 0.00 0.00 5.92
128 129 2.049526 CCTTTGTTTTCCCCGCGC 60.050 61.111 0.00 0.00 0.00 6.86
129 130 0.601057 ATTCCTTTGTTTTCCCCGCG 59.399 50.000 0.00 0.00 0.00 6.46
130 131 2.299013 AGAATTCCTTTGTTTTCCCCGC 59.701 45.455 0.65 0.00 0.00 6.13
131 132 4.521256 TGTAGAATTCCTTTGTTTTCCCCG 59.479 41.667 0.65 0.00 0.00 5.73
132 133 6.413783 TTGTAGAATTCCTTTGTTTTCCCC 57.586 37.500 0.65 0.00 0.00 4.81
133 134 8.725405 TTTTTGTAGAATTCCTTTGTTTTCCC 57.275 30.769 0.65 0.00 0.00 3.97
134 135 8.826710 CCTTTTTGTAGAATTCCTTTGTTTTCC 58.173 33.333 0.65 0.00 0.00 3.13
135 136 9.378551 ACCTTTTTGTAGAATTCCTTTGTTTTC 57.621 29.630 0.65 0.00 0.00 2.29
136 137 9.733556 AACCTTTTTGTAGAATTCCTTTGTTTT 57.266 25.926 0.65 0.00 0.00 2.43
137 138 9.733556 AAACCTTTTTGTAGAATTCCTTTGTTT 57.266 25.926 0.65 0.00 0.00 2.83
138 139 9.161629 CAAACCTTTTTGTAGAATTCCTTTGTT 57.838 29.630 0.65 0.00 37.85 2.83
139 140 8.536175 TCAAACCTTTTTGTAGAATTCCTTTGT 58.464 29.630 0.65 0.00 42.51 2.83
140 141 8.940768 TCAAACCTTTTTGTAGAATTCCTTTG 57.059 30.769 0.65 0.00 42.51 2.77
141 142 8.758829 ACTCAAACCTTTTTGTAGAATTCCTTT 58.241 29.630 0.65 0.00 42.51 3.11
142 143 8.197439 CACTCAAACCTTTTTGTAGAATTCCTT 58.803 33.333 0.65 0.00 42.51 3.36
143 144 7.201911 CCACTCAAACCTTTTTGTAGAATTCCT 60.202 37.037 0.65 0.00 42.51 3.36
144 145 6.923508 CCACTCAAACCTTTTTGTAGAATTCC 59.076 38.462 0.65 0.00 42.51 3.01
145 146 7.712797 TCCACTCAAACCTTTTTGTAGAATTC 58.287 34.615 0.00 0.00 42.51 2.17
146 147 7.654022 TCCACTCAAACCTTTTTGTAGAATT 57.346 32.000 0.00 0.00 42.51 2.17
147 148 7.255942 CCATCCACTCAAACCTTTTTGTAGAAT 60.256 37.037 0.00 0.00 42.51 2.40
148 149 6.040391 CCATCCACTCAAACCTTTTTGTAGAA 59.960 38.462 0.00 0.00 42.51 2.10
149 150 5.534654 CCATCCACTCAAACCTTTTTGTAGA 59.465 40.000 0.00 0.00 42.51 2.59
150 151 5.534654 TCCATCCACTCAAACCTTTTTGTAG 59.465 40.000 0.00 0.00 42.51 2.74
151 152 5.450453 TCCATCCACTCAAACCTTTTTGTA 58.550 37.500 0.00 0.00 42.51 2.41
152 153 4.285863 TCCATCCACTCAAACCTTTTTGT 58.714 39.130 0.00 0.00 42.51 2.83
153 154 4.935352 TCCATCCACTCAAACCTTTTTG 57.065 40.909 0.00 0.00 43.17 2.44
154 155 5.948742 TTTCCATCCACTCAAACCTTTTT 57.051 34.783 0.00 0.00 0.00 1.94
155 156 6.499106 AATTTCCATCCACTCAAACCTTTT 57.501 33.333 0.00 0.00 0.00 2.27
156 157 6.499106 AAATTTCCATCCACTCAAACCTTT 57.501 33.333 0.00 0.00 0.00 3.11
157 158 6.499106 AAAATTTCCATCCACTCAAACCTT 57.501 33.333 0.00 0.00 0.00 3.50
158 159 6.101650 GAAAATTTCCATCCACTCAAACCT 57.898 37.500 0.00 0.00 0.00 3.50
226 227 7.623089 GCTCGTTTGATTCATAGGATTAGCATC 60.623 40.741 0.97 0.00 0.00 3.91
227 228 6.148480 GCTCGTTTGATTCATAGGATTAGCAT 59.852 38.462 0.97 0.00 0.00 3.79
228 229 5.466728 GCTCGTTTGATTCATAGGATTAGCA 59.533 40.000 0.97 0.00 0.00 3.49
229 230 5.466728 TGCTCGTTTGATTCATAGGATTAGC 59.533 40.000 0.97 0.00 0.00 3.09
230 231 7.386025 TGATGCTCGTTTGATTCATAGGATTAG 59.614 37.037 0.97 0.00 0.00 1.73
231 232 7.171508 GTGATGCTCGTTTGATTCATAGGATTA 59.828 37.037 0.97 0.00 0.00 1.75
232 233 6.017605 GTGATGCTCGTTTGATTCATAGGATT 60.018 38.462 0.97 0.00 0.00 3.01
233 234 5.468072 GTGATGCTCGTTTGATTCATAGGAT 59.532 40.000 0.97 0.00 0.00 3.24
234 235 4.811024 GTGATGCTCGTTTGATTCATAGGA 59.189 41.667 0.00 0.00 0.00 2.94
235 236 4.571984 TGTGATGCTCGTTTGATTCATAGG 59.428 41.667 0.00 0.00 0.00 2.57
236 237 5.277202 CCTGTGATGCTCGTTTGATTCATAG 60.277 44.000 0.00 0.00 0.00 2.23
237 238 4.571984 CCTGTGATGCTCGTTTGATTCATA 59.428 41.667 0.00 0.00 0.00 2.15
238 239 3.376234 CCTGTGATGCTCGTTTGATTCAT 59.624 43.478 0.00 0.00 0.00 2.57
239 240 2.743664 CCTGTGATGCTCGTTTGATTCA 59.256 45.455 0.00 0.00 0.00 2.57
240 241 3.002791 TCCTGTGATGCTCGTTTGATTC 58.997 45.455 0.00 0.00 0.00 2.52
241 242 3.057969 TCCTGTGATGCTCGTTTGATT 57.942 42.857 0.00 0.00 0.00 2.57
242 243 2.768253 TCCTGTGATGCTCGTTTGAT 57.232 45.000 0.00 0.00 0.00 2.57
243 244 2.542020 TTCCTGTGATGCTCGTTTGA 57.458 45.000 0.00 0.00 0.00 2.69
244 245 3.837213 ATTTCCTGTGATGCTCGTTTG 57.163 42.857 0.00 0.00 0.00 2.93
245 246 5.066505 GGAATATTTCCTGTGATGCTCGTTT 59.933 40.000 0.00 0.00 46.57 3.60
246 247 4.576463 GGAATATTTCCTGTGATGCTCGTT 59.424 41.667 0.00 0.00 46.57 3.85
247 248 4.130118 GGAATATTTCCTGTGATGCTCGT 58.870 43.478 0.00 0.00 46.57 4.18
248 249 4.739046 GGAATATTTCCTGTGATGCTCG 57.261 45.455 0.00 0.00 46.57 5.03
261 262 9.656323 GGAGGATTTAAACCCTTAGGAATATTT 57.344 33.333 1.57 0.00 36.73 1.40
262 263 8.797674 TGGAGGATTTAAACCCTTAGGAATATT 58.202 33.333 1.57 0.00 36.73 1.28
263 264 8.358082 TGGAGGATTTAAACCCTTAGGAATAT 57.642 34.615 1.57 0.00 36.73 1.28
264 265 7.774694 TGGAGGATTTAAACCCTTAGGAATA 57.225 36.000 1.57 0.00 36.73 1.75
265 266 6.668133 TGGAGGATTTAAACCCTTAGGAAT 57.332 37.500 1.57 0.00 36.73 3.01
266 267 6.471942 TTGGAGGATTTAAACCCTTAGGAA 57.528 37.500 1.57 0.00 36.73 3.36
267 268 6.471942 TTTGGAGGATTTAAACCCTTAGGA 57.528 37.500 1.57 0.00 36.73 2.94
268 269 7.547697 TTTTTGGAGGATTTAAACCCTTAGG 57.452 36.000 1.57 0.00 40.04 2.69
269 270 8.258007 GGATTTTTGGAGGATTTAAACCCTTAG 58.742 37.037 1.57 0.00 31.84 2.18
270 271 7.959152 AGGATTTTTGGAGGATTTAAACCCTTA 59.041 33.333 1.57 0.00 31.84 2.69
271 272 6.792473 AGGATTTTTGGAGGATTTAAACCCTT 59.208 34.615 1.57 0.00 31.84 3.95
272 273 6.331032 AGGATTTTTGGAGGATTTAAACCCT 58.669 36.000 0.00 0.00 35.02 4.34
273 274 6.620877 AGGATTTTTGGAGGATTTAAACCC 57.379 37.500 0.00 0.00 0.00 4.11
274 275 7.710907 GCATAGGATTTTTGGAGGATTTAAACC 59.289 37.037 0.00 0.00 0.00 3.27
275 276 8.257306 TGCATAGGATTTTTGGAGGATTTAAAC 58.743 33.333 0.00 0.00 0.00 2.01
276 277 8.372877 TGCATAGGATTTTTGGAGGATTTAAA 57.627 30.769 0.00 0.00 0.00 1.52
277 278 7.969690 TGCATAGGATTTTTGGAGGATTTAA 57.030 32.000 0.00 0.00 0.00 1.52
278 279 7.969690 TTGCATAGGATTTTTGGAGGATTTA 57.030 32.000 0.00 0.00 0.00 1.40
279 280 6.872585 TTGCATAGGATTTTTGGAGGATTT 57.127 33.333 0.00 0.00 0.00 2.17
280 281 7.419403 GGAATTGCATAGGATTTTTGGAGGATT 60.419 37.037 0.00 0.00 0.00 3.01
281 282 6.042437 GGAATTGCATAGGATTTTTGGAGGAT 59.958 38.462 0.00 0.00 0.00 3.24
282 283 5.363580 GGAATTGCATAGGATTTTTGGAGGA 59.636 40.000 0.00 0.00 0.00 3.71
283 284 5.364735 AGGAATTGCATAGGATTTTTGGAGG 59.635 40.000 0.00 0.00 0.00 4.30
284 285 6.475596 AGGAATTGCATAGGATTTTTGGAG 57.524 37.500 0.00 0.00 0.00 3.86
285 286 6.872585 AAGGAATTGCATAGGATTTTTGGA 57.127 33.333 0.00 0.00 0.00 3.53
286 287 7.104939 TCAAAGGAATTGCATAGGATTTTTGG 58.895 34.615 0.00 0.00 38.98 3.28
287 288 8.550710 TTCAAAGGAATTGCATAGGATTTTTG 57.449 30.769 0.00 0.00 38.98 2.44
288 289 9.387257 GATTCAAAGGAATTGCATAGGATTTTT 57.613 29.630 0.00 0.00 43.69 1.94
289 290 8.542080 TGATTCAAAGGAATTGCATAGGATTTT 58.458 29.630 0.00 0.00 43.69 1.82
290 291 8.081517 TGATTCAAAGGAATTGCATAGGATTT 57.918 30.769 0.00 0.00 43.69 2.17
291 292 7.664552 TGATTCAAAGGAATTGCATAGGATT 57.335 32.000 0.00 0.00 43.69 3.01
292 293 7.664552 TTGATTCAAAGGAATTGCATAGGAT 57.335 32.000 0.00 0.00 43.69 3.24
293 294 7.479352 TTTGATTCAAAGGAATTGCATAGGA 57.521 32.000 7.74 0.00 43.69 2.94
294 295 7.766219 CTTTGATTCAAAGGAATTGCATAGG 57.234 36.000 25.14 2.45 44.75 2.57
306 307 3.828451 TGAAGGGCTCCTTTGATTCAAAG 59.172 43.478 25.66 25.66 44.82 2.77
307 308 3.843422 TGAAGGGCTCCTTTGATTCAAA 58.157 40.909 11.19 11.19 44.82 2.69
308 309 3.524095 TGAAGGGCTCCTTTGATTCAA 57.476 42.857 7.76 0.00 44.82 2.69
309 310 3.744940 ATGAAGGGCTCCTTTGATTCA 57.255 42.857 7.76 0.00 44.82 2.57
310 311 4.140536 CCTATGAAGGGCTCCTTTGATTC 58.859 47.826 7.76 0.00 44.82 2.52
311 312 3.788142 TCCTATGAAGGGCTCCTTTGATT 59.212 43.478 7.76 0.00 44.82 2.57
312 313 3.397527 TCCTATGAAGGGCTCCTTTGAT 58.602 45.455 7.76 6.38 44.82 2.57
313 314 2.845659 TCCTATGAAGGGCTCCTTTGA 58.154 47.619 7.76 0.07 44.82 2.69
314 315 3.652057 TTCCTATGAAGGGCTCCTTTG 57.348 47.619 7.76 1.11 44.82 2.77
315 316 4.888626 ATTTCCTATGAAGGGCTCCTTT 57.111 40.909 7.76 0.00 44.82 3.11
317 318 4.888626 AAATTTCCTATGAAGGGCTCCT 57.111 40.909 0.00 0.00 43.84 3.69
318 319 5.891551 TGTTAAATTTCCTATGAAGGGCTCC 59.108 40.000 0.00 0.00 43.84 4.70
319 320 7.255625 GGATGTTAAATTTCCTATGAAGGGCTC 60.256 40.741 0.00 0.00 43.84 4.70
320 321 6.551227 GGATGTTAAATTTCCTATGAAGGGCT 59.449 38.462 0.00 0.00 43.84 5.19
321 322 6.323739 TGGATGTTAAATTTCCTATGAAGGGC 59.676 38.462 0.00 0.00 43.84 5.19
322 323 7.561356 AGTGGATGTTAAATTTCCTATGAAGGG 59.439 37.037 0.00 0.00 43.84 3.95
323 324 8.525290 AGTGGATGTTAAATTTCCTATGAAGG 57.475 34.615 0.00 0.00 45.21 3.46
325 326 9.527157 TGAAGTGGATGTTAAATTTCCTATGAA 57.473 29.630 0.00 0.00 0.00 2.57
326 327 9.527157 TTGAAGTGGATGTTAAATTTCCTATGA 57.473 29.630 0.00 0.00 0.00 2.15
327 328 9.573133 GTTGAAGTGGATGTTAAATTTCCTATG 57.427 33.333 0.00 0.00 0.00 2.23
328 329 8.749354 GGTTGAAGTGGATGTTAAATTTCCTAT 58.251 33.333 0.00 0.00 0.00 2.57
329 330 7.947890 AGGTTGAAGTGGATGTTAAATTTCCTA 59.052 33.333 0.00 0.00 0.00 2.94
330 331 6.782494 AGGTTGAAGTGGATGTTAAATTTCCT 59.218 34.615 0.00 0.00 0.00 3.36
331 332 6.993079 AGGTTGAAGTGGATGTTAAATTTCC 58.007 36.000 0.00 0.00 0.00 3.13
332 333 7.886338 AGAGGTTGAAGTGGATGTTAAATTTC 58.114 34.615 0.00 0.00 0.00 2.17
333 334 7.839680 AGAGGTTGAAGTGGATGTTAAATTT 57.160 32.000 0.00 0.00 0.00 1.82
334 335 7.839680 AAGAGGTTGAAGTGGATGTTAAATT 57.160 32.000 0.00 0.00 0.00 1.82
335 336 7.839680 AAAGAGGTTGAAGTGGATGTTAAAT 57.160 32.000 0.00 0.00 0.00 1.40
336 337 7.654022 AAAAGAGGTTGAAGTGGATGTTAAA 57.346 32.000 0.00 0.00 0.00 1.52
337 338 7.654022 AAAAAGAGGTTGAAGTGGATGTTAA 57.346 32.000 0.00 0.00 0.00 2.01
338 339 7.776030 TGTAAAAAGAGGTTGAAGTGGATGTTA 59.224 33.333 0.00 0.00 0.00 2.41
339 340 6.605594 TGTAAAAAGAGGTTGAAGTGGATGTT 59.394 34.615 0.00 0.00 0.00 2.71
340 341 6.126409 TGTAAAAAGAGGTTGAAGTGGATGT 58.874 36.000 0.00 0.00 0.00 3.06
341 342 6.633500 TGTAAAAAGAGGTTGAAGTGGATG 57.367 37.500 0.00 0.00 0.00 3.51
342 343 7.839680 ATTGTAAAAAGAGGTTGAAGTGGAT 57.160 32.000 0.00 0.00 0.00 3.41
343 344 7.201875 GGAATTGTAAAAAGAGGTTGAAGTGGA 60.202 37.037 0.00 0.00 0.00 4.02
344 345 6.923508 GGAATTGTAAAAAGAGGTTGAAGTGG 59.076 38.462 0.00 0.00 0.00 4.00
345 346 7.716612 AGGAATTGTAAAAAGAGGTTGAAGTG 58.283 34.615 0.00 0.00 0.00 3.16
346 347 7.898014 AGGAATTGTAAAAAGAGGTTGAAGT 57.102 32.000 0.00 0.00 0.00 3.01
347 348 9.034544 CAAAGGAATTGTAAAAAGAGGTTGAAG 57.965 33.333 0.00 0.00 34.16 3.02
348 349 8.940768 CAAAGGAATTGTAAAAAGAGGTTGAA 57.059 30.769 0.00 0.00 34.16 2.69
363 364 4.506288 GTCACGGGAAAAACAAAGGAATTG 59.494 41.667 0.00 0.00 44.95 2.32
364 365 4.160626 TGTCACGGGAAAAACAAAGGAATT 59.839 37.500 0.00 0.00 0.00 2.17
365 366 3.702045 TGTCACGGGAAAAACAAAGGAAT 59.298 39.130 0.00 0.00 0.00 3.01
366 367 3.090037 TGTCACGGGAAAAACAAAGGAA 58.910 40.909 0.00 0.00 0.00 3.36
367 368 2.724454 TGTCACGGGAAAAACAAAGGA 58.276 42.857 0.00 0.00 0.00 3.36
368 369 3.067461 TGATGTCACGGGAAAAACAAAGG 59.933 43.478 0.00 0.00 0.00 3.11
369 370 4.300189 TGATGTCACGGGAAAAACAAAG 57.700 40.909 0.00 0.00 0.00 2.77
370 371 4.720649 TTGATGTCACGGGAAAAACAAA 57.279 36.364 0.00 0.00 0.00 2.83
371 372 4.082190 TGTTTGATGTCACGGGAAAAACAA 60.082 37.500 13.63 6.71 34.22 2.83
372 373 3.444034 TGTTTGATGTCACGGGAAAAACA 59.556 39.130 12.54 12.54 34.62 2.83
373 374 4.035278 TGTTTGATGTCACGGGAAAAAC 57.965 40.909 0.00 0.00 0.00 2.43
374 375 4.720649 TTGTTTGATGTCACGGGAAAAA 57.279 36.364 0.00 0.00 0.00 1.94
375 376 4.339530 TGATTGTTTGATGTCACGGGAAAA 59.660 37.500 0.00 0.00 0.00 2.29
376 377 3.885901 TGATTGTTTGATGTCACGGGAAA 59.114 39.130 0.00 0.00 0.00 3.13
377 378 3.481453 TGATTGTTTGATGTCACGGGAA 58.519 40.909 0.00 0.00 0.00 3.97
378 379 3.133141 TGATTGTTTGATGTCACGGGA 57.867 42.857 0.00 0.00 0.00 5.14
379 380 4.168014 CAATGATTGTTTGATGTCACGGG 58.832 43.478 0.00 0.00 0.00 5.28
380 381 3.609373 GCAATGATTGTTTGATGTCACGG 59.391 43.478 7.05 0.00 0.00 4.94
381 382 4.478699 AGCAATGATTGTTTGATGTCACG 58.521 39.130 7.05 0.00 0.00 4.35
382 383 8.470040 AATTAGCAATGATTGTTTGATGTCAC 57.530 30.769 7.05 0.00 0.00 3.67
383 384 9.491675 AAAATTAGCAATGATTGTTTGATGTCA 57.508 25.926 7.05 0.00 0.00 3.58
406 407 9.473007 TGACATGTCCATTTGAATCCTATAAAA 57.527 29.630 22.85 0.00 0.00 1.52
407 408 8.902806 GTGACATGTCCATTTGAATCCTATAAA 58.097 33.333 22.85 0.00 0.00 1.40
408 409 8.274322 AGTGACATGTCCATTTGAATCCTATAA 58.726 33.333 22.85 0.00 0.00 0.98
409 410 7.805163 AGTGACATGTCCATTTGAATCCTATA 58.195 34.615 22.85 0.00 0.00 1.31
410 411 6.666678 AGTGACATGTCCATTTGAATCCTAT 58.333 36.000 22.85 0.00 0.00 2.57
411 412 6.065976 AGTGACATGTCCATTTGAATCCTA 57.934 37.500 22.85 0.00 0.00 2.94
412 413 4.927049 AGTGACATGTCCATTTGAATCCT 58.073 39.130 22.85 1.12 0.00 3.24
413 414 4.096984 GGAGTGACATGTCCATTTGAATCC 59.903 45.833 22.85 16.22 32.55 3.01
414 415 4.701651 TGGAGTGACATGTCCATTTGAATC 59.298 41.667 22.85 11.33 37.96 2.52
415 416 4.665451 TGGAGTGACATGTCCATTTGAAT 58.335 39.130 22.85 2.17 37.96 2.57
416 417 4.097551 TGGAGTGACATGTCCATTTGAA 57.902 40.909 22.85 0.00 37.96 2.69
417 418 3.786368 TGGAGTGACATGTCCATTTGA 57.214 42.857 22.85 0.00 37.96 2.69
418 419 4.142315 GGATTGGAGTGACATGTCCATTTG 60.142 45.833 22.85 0.00 42.55 2.32
419 420 4.019174 GGATTGGAGTGACATGTCCATTT 58.981 43.478 22.85 5.84 42.55 2.32
420 421 3.267812 AGGATTGGAGTGACATGTCCATT 59.732 43.478 22.85 10.43 42.55 3.16
421 422 2.848694 AGGATTGGAGTGACATGTCCAT 59.151 45.455 22.85 11.35 42.55 3.41
422 423 2.269023 AGGATTGGAGTGACATGTCCA 58.731 47.619 22.85 11.54 41.29 4.02
423 424 4.696479 ATAGGATTGGAGTGACATGTCC 57.304 45.455 22.85 13.88 0.00 4.02
424 425 6.412362 AGTATAGGATTGGAGTGACATGTC 57.588 41.667 19.27 19.27 0.00 3.06
425 426 6.814954 AAGTATAGGATTGGAGTGACATGT 57.185 37.500 0.00 0.00 0.00 3.21
426 427 8.511604 AAAAAGTATAGGATTGGAGTGACATG 57.488 34.615 0.00 0.00 0.00 3.21
427 428 8.552296 AGAAAAAGTATAGGATTGGAGTGACAT 58.448 33.333 0.00 0.00 0.00 3.06
428 429 7.918076 AGAAAAAGTATAGGATTGGAGTGACA 58.082 34.615 0.00 0.00 0.00 3.58
465 466 8.943002 GGTCTCTTTGATTCGTAGGATTTTAAA 58.057 33.333 0.00 0.00 0.00 1.52
466 467 7.551617 GGGTCTCTTTGATTCGTAGGATTTTAA 59.448 37.037 0.00 0.00 0.00 1.52
467 468 7.046033 GGGTCTCTTTGATTCGTAGGATTTTA 58.954 38.462 0.00 0.00 0.00 1.52
468 469 5.880887 GGGTCTCTTTGATTCGTAGGATTTT 59.119 40.000 0.00 0.00 0.00 1.82
469 470 5.189934 AGGGTCTCTTTGATTCGTAGGATTT 59.810 40.000 0.00 0.00 0.00 2.17
470 471 4.717280 AGGGTCTCTTTGATTCGTAGGATT 59.283 41.667 0.00 0.00 0.00 3.01
471 472 4.290942 AGGGTCTCTTTGATTCGTAGGAT 58.709 43.478 0.00 0.00 0.00 3.24
472 473 3.709587 AGGGTCTCTTTGATTCGTAGGA 58.290 45.455 0.00 0.00 0.00 2.94
473 474 4.473477 AAGGGTCTCTTTGATTCGTAGG 57.527 45.455 0.00 0.00 29.99 3.18
474 475 7.466050 GCAATTAAGGGTCTCTTTGATTCGTAG 60.466 40.741 0.00 0.00 36.93 3.51
475 476 6.315393 GCAATTAAGGGTCTCTTTGATTCGTA 59.685 38.462 0.00 0.00 36.93 3.43
476 477 5.123979 GCAATTAAGGGTCTCTTTGATTCGT 59.876 40.000 0.00 0.00 36.93 3.85
477 478 5.355350 AGCAATTAAGGGTCTCTTTGATTCG 59.645 40.000 0.00 0.00 36.93 3.34
478 479 6.375455 TCAGCAATTAAGGGTCTCTTTGATTC 59.625 38.462 0.00 0.00 36.93 2.52
479 480 6.248433 TCAGCAATTAAGGGTCTCTTTGATT 58.752 36.000 0.00 0.00 36.93 2.57
480 481 5.819991 TCAGCAATTAAGGGTCTCTTTGAT 58.180 37.500 0.00 0.00 36.93 2.57
481 482 5.241403 TCAGCAATTAAGGGTCTCTTTGA 57.759 39.130 0.00 0.00 36.93 2.69
482 483 4.397417 CCTCAGCAATTAAGGGTCTCTTTG 59.603 45.833 0.00 0.00 36.93 2.77
483 484 4.568592 CCCTCAGCAATTAAGGGTCTCTTT 60.569 45.833 0.00 0.00 44.11 2.52
484 485 3.054065 CCCTCAGCAATTAAGGGTCTCTT 60.054 47.826 0.00 0.00 44.11 2.85
485 486 2.507471 CCCTCAGCAATTAAGGGTCTCT 59.493 50.000 0.00 0.00 44.11 3.10
486 487 2.924421 CCCTCAGCAATTAAGGGTCTC 58.076 52.381 0.00 0.00 44.11 3.36
491 492 4.089361 ACTTTTCCCCTCAGCAATTAAGG 58.911 43.478 0.00 0.00 0.00 2.69
492 493 4.142600 CGACTTTTCCCCTCAGCAATTAAG 60.143 45.833 0.00 0.00 0.00 1.85
493 494 3.756434 CGACTTTTCCCCTCAGCAATTAA 59.244 43.478 0.00 0.00 0.00 1.40
494 495 3.343617 CGACTTTTCCCCTCAGCAATTA 58.656 45.455 0.00 0.00 0.00 1.40
495 496 2.162681 CGACTTTTCCCCTCAGCAATT 58.837 47.619 0.00 0.00 0.00 2.32
697 704 2.221918 CCACCTACAGATGGGTCCC 58.778 63.158 0.00 0.00 37.67 4.46
723 730 2.683475 CAACCCATCCACCTCCCC 59.317 66.667 0.00 0.00 0.00 4.81
779 786 2.072487 TGTAGCCAGCCTGGATCCC 61.072 63.158 16.85 3.01 40.96 3.85
816 823 1.377202 CGATGGGGAAGGTGTGGTG 60.377 63.158 0.00 0.00 0.00 4.17
817 824 1.838073 GACGATGGGGAAGGTGTGGT 61.838 60.000 0.00 0.00 0.00 4.16
820 827 1.677552 GTGACGATGGGGAAGGTGT 59.322 57.895 0.00 0.00 0.00 4.16
821 828 1.078426 GGTGACGATGGGGAAGGTG 60.078 63.158 0.00 0.00 0.00 4.00
822 829 1.537889 TGGTGACGATGGGGAAGGT 60.538 57.895 0.00 0.00 0.00 3.50
823 830 1.078426 GTGGTGACGATGGGGAAGG 60.078 63.158 0.00 0.00 0.00 3.46
824 831 0.673644 GTGTGGTGACGATGGGGAAG 60.674 60.000 0.00 0.00 0.00 3.46
826 833 2.589157 GGTGTGGTGACGATGGGGA 61.589 63.158 0.00 0.00 0.00 4.81
829 836 0.673644 GGAAGGTGTGGTGACGATGG 60.674 60.000 0.00 0.00 0.00 3.51
830 837 0.673644 GGGAAGGTGTGGTGACGATG 60.674 60.000 0.00 0.00 0.00 3.84
831 838 1.677552 GGGAAGGTGTGGTGACGAT 59.322 57.895 0.00 0.00 0.00 3.73
862 869 4.550422 GAGCAAGAAAAGGTTGATGTTCC 58.450 43.478 0.00 0.00 0.00 3.62
912 920 2.284190 GTGGCTGGCTTCTGTATCTTC 58.716 52.381 2.00 0.00 0.00 2.87
933 941 2.355717 ACTTCTTCTTCTTCTCGGCG 57.644 50.000 0.00 0.00 0.00 6.46
952 960 1.588082 GCCACCTCGTCCTTCGTAA 59.412 57.895 0.00 0.00 40.80 3.18
1656 1682 5.278907 GGTTGAATTGTTCACCATGATGACA 60.279 40.000 0.00 0.00 39.87 3.58
1660 1686 5.078949 TGAGGTTGAATTGTTCACCATGAT 58.921 37.500 0.00 0.00 39.87 2.45
1666 1692 5.221422 TGGGAATTGAGGTTGAATTGTTCAC 60.221 40.000 0.00 0.00 39.87 3.18
1714 1743 4.794169 ACACCGAAATTTTGAGGAATTCG 58.206 39.130 7.02 0.00 0.00 3.34
1868 1897 4.722700 ATGGACGCCAGTGCCACC 62.723 66.667 4.90 0.00 36.75 4.61
2053 2090 0.103937 GTCAGGAATCAGGAGCTCGG 59.896 60.000 7.83 2.36 0.00 4.63
2832 2869 1.186200 CAGTCTGATCTCCCACGGAA 58.814 55.000 0.00 0.00 0.00 4.30
2833 2870 0.039764 ACAGTCTGATCTCCCACGGA 59.960 55.000 6.91 0.00 0.00 4.69
2834 2871 0.457851 GACAGTCTGATCTCCCACGG 59.542 60.000 6.91 0.00 0.00 4.94
2874 2911 0.684535 CACCCCCACCAAAAATCACC 59.315 55.000 0.00 0.00 0.00 4.02
3027 6565 7.447238 AGAAAAATTGAAACTGGAAGGACGATA 59.553 33.333 0.00 0.00 39.30 2.92
3092 6632 6.576662 TCATTCTGCAACGGGTTTTAATAA 57.423 33.333 0.00 0.00 0.00 1.40
3095 6635 4.920640 TTCATTCTGCAACGGGTTTTAA 57.079 36.364 0.00 0.00 0.00 1.52
3147 6721 6.704493 TCACAACTACTAGTGGCACTAAAAAG 59.296 38.462 26.12 22.81 36.43 2.27
3152 6726 5.014202 TCATCACAACTACTAGTGGCACTA 58.986 41.667 24.84 24.84 36.43 2.74
3153 6727 3.832490 TCATCACAACTACTAGTGGCACT 59.168 43.478 25.34 25.34 36.43 4.40
3154 6728 4.177026 CTCATCACAACTACTAGTGGCAC 58.823 47.826 10.29 10.29 36.43 5.01
3155 6729 3.832490 ACTCATCACAACTACTAGTGGCA 59.168 43.478 5.39 0.00 36.43 4.92
3156 6730 4.457834 ACTCATCACAACTACTAGTGGC 57.542 45.455 5.39 0.00 36.43 5.01
3158 6732 8.864024 CAATACAACTCATCACAACTACTAGTG 58.136 37.037 5.39 0.00 37.10 2.74
3159 6733 8.035394 CCAATACAACTCATCACAACTACTAGT 58.965 37.037 0.00 0.00 0.00 2.57
3160 6734 8.035394 ACCAATACAACTCATCACAACTACTAG 58.965 37.037 0.00 0.00 0.00 2.57
3161 6735 7.903145 ACCAATACAACTCATCACAACTACTA 58.097 34.615 0.00 0.00 0.00 1.82
3162 6736 6.769512 ACCAATACAACTCATCACAACTACT 58.230 36.000 0.00 0.00 0.00 2.57
3163 6737 7.817962 ACTACCAATACAACTCATCACAACTAC 59.182 37.037 0.00 0.00 0.00 2.73
3197 6777 3.243267 CGACCCCAACAAATCTTTTCGTT 60.243 43.478 0.00 0.00 0.00 3.85
3202 6782 1.877443 CGTCGACCCCAACAAATCTTT 59.123 47.619 10.58 0.00 0.00 2.52
3225 6805 1.079127 CCACGCCCACTTCTACCAG 60.079 63.158 0.00 0.00 0.00 4.00
3297 8232 4.624364 CCCACACTGCAGGCGTCA 62.624 66.667 19.93 0.00 0.00 4.35
3345 8282 1.135460 GGAGTAGGAGTGGACGAAACG 60.135 57.143 0.00 0.00 0.00 3.60
3441 8378 0.962356 CCCATCTGACCCACTGCAAC 60.962 60.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.