Multiple sequence alignment - TraesCS2A01G267500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G267500 chr2A 100.000 3428 0 0 1 3428 428118267 428121694 0.000000e+00 6331
1 TraesCS2A01G267500 chr2A 90.333 300 28 1 1 299 773371869 773371570 3.210000e-105 392
2 TraesCS2A01G267500 chr2A 92.308 208 9 6 2566 2768 117393217 117393012 4.330000e-74 289
3 TraesCS2A01G267500 chr2D 94.287 2958 70 28 496 3428 311548143 311551026 0.000000e+00 4434
4 TraesCS2A01G267500 chr2D 93.467 199 11 1 2572 2768 128025767 128025965 9.300000e-76 294
5 TraesCS2A01G267500 chr2B 96.744 2426 57 9 1013 3428 361578936 361576523 0.000000e+00 4023
6 TraesCS2A01G267500 chr2B 92.760 442 6 4 523 941 361579649 361579211 1.750000e-172 616
7 TraesCS2A01G267500 chr2B 90.338 207 17 2 2565 2768 91204906 91205112 5.640000e-68 268
8 TraesCS2A01G267500 chr5D 92.282 298 23 0 1 298 63157121 63157418 1.140000e-114 424
9 TraesCS2A01G267500 chr1B 90.268 298 29 0 1 298 532682275 532682572 1.150000e-104 390
10 TraesCS2A01G267500 chr1B 89.933 298 30 0 1 298 31540416 31540119 5.370000e-103 385
11 TraesCS2A01G267500 chr1B 89.597 298 31 0 1 298 31563378 31563081 2.500000e-101 379
12 TraesCS2A01G267500 chr6A 86.486 296 38 2 1 295 454384296 454384590 1.190000e-84 324
13 TraesCS2A01G267500 chr6A 90.732 205 17 2 2570 2772 549989982 549989778 4.360000e-69 272
14 TraesCS2A01G267500 chr6D 85.811 296 41 1 1 295 316425324 316425619 2.570000e-81 313
15 TraesCS2A01G267500 chr6B 87.302 252 32 0 1 252 508176850 508176599 4.330000e-74 289
16 TraesCS2A01G267500 chr1A 91.388 209 16 1 2567 2773 440899059 440899267 5.600000e-73 285
17 TraesCS2A01G267500 chr1A 77.258 299 67 1 1 299 547406133 547406430 1.260000e-39 174
18 TraesCS2A01G267500 chr3D 92.347 196 11 3 2576 2768 436020076 436020270 3.370000e-70 276
19 TraesCS2A01G267500 chr4B 89.352 216 19 4 2564 2776 601794809 601795023 5.640000e-68 268


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G267500 chr2A 428118267 428121694 3427 False 6331.0 6331 100.000 1 3428 1 chr2A.!!$F1 3427
1 TraesCS2A01G267500 chr2D 311548143 311551026 2883 False 4434.0 4434 94.287 496 3428 1 chr2D.!!$F2 2932
2 TraesCS2A01G267500 chr2B 361576523 361579649 3126 True 2319.5 4023 94.752 523 3428 2 chr2B.!!$R1 2905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
158 159 0.035056 ATCGCCAAGCCTGTTTAGCT 60.035 50.0 0.0 0.0 44.19 3.32 F
986 1012 0.036875 AACCCTAGCTCACCACAAGC 59.963 55.0 0.0 0.0 40.14 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1680 1926 1.682684 CTCGGTACTGTCCCCAGCT 60.683 63.158 0.64 0.00 42.81 4.24 R
2594 2840 1.676529 GGAGGAGGCGGCTTATTTTTC 59.323 52.381 14.76 4.98 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.692115 TCACTAGTTGAAGGCCATATTCA 57.308 39.130 5.01 3.14 34.93 2.57
24 25 6.061022 TCACTAGTTGAAGGCCATATTCAA 57.939 37.500 13.17 13.17 42.73 2.69
25 26 6.662755 TCACTAGTTGAAGGCCATATTCAAT 58.337 36.000 18.48 11.62 45.54 2.57
26 27 7.801104 TCACTAGTTGAAGGCCATATTCAATA 58.199 34.615 18.48 12.00 45.54 1.90
27 28 7.715249 TCACTAGTTGAAGGCCATATTCAATAC 59.285 37.037 18.48 9.91 45.54 1.89
28 29 6.998673 ACTAGTTGAAGGCCATATTCAATACC 59.001 38.462 18.48 8.72 45.54 2.73
29 30 6.018433 AGTTGAAGGCCATATTCAATACCT 57.982 37.500 18.48 10.45 45.54 3.08
30 31 6.435164 AGTTGAAGGCCATATTCAATACCTT 58.565 36.000 18.48 0.00 45.54 3.50
31 32 6.897413 AGTTGAAGGCCATATTCAATACCTTT 59.103 34.615 18.48 0.00 45.54 3.11
32 33 6.959639 TGAAGGCCATATTCAATACCTTTC 57.040 37.500 5.01 0.00 37.63 2.62
33 34 5.833131 TGAAGGCCATATTCAATACCTTTCC 59.167 40.000 5.01 0.00 37.63 3.13
34 35 5.402054 AGGCCATATTCAATACCTTTCCA 57.598 39.130 5.01 0.00 0.00 3.53
35 36 5.776358 AGGCCATATTCAATACCTTTCCAA 58.224 37.500 5.01 0.00 0.00 3.53
36 37 6.201591 AGGCCATATTCAATACCTTTCCAAA 58.798 36.000 5.01 0.00 0.00 3.28
37 38 6.098266 AGGCCATATTCAATACCTTTCCAAAC 59.902 38.462 5.01 0.00 0.00 2.93
38 39 6.127196 GGCCATATTCAATACCTTTCCAAACA 60.127 38.462 0.00 0.00 0.00 2.83
39 40 7.327214 GCCATATTCAATACCTTTCCAAACAA 58.673 34.615 0.00 0.00 0.00 2.83
40 41 7.277760 GCCATATTCAATACCTTTCCAAACAAC 59.722 37.037 0.00 0.00 0.00 3.32
41 42 7.763985 CCATATTCAATACCTTTCCAAACAACC 59.236 37.037 0.00 0.00 0.00 3.77
42 43 6.739331 ATTCAATACCTTTCCAAACAACCA 57.261 33.333 0.00 0.00 0.00 3.67
43 44 6.546428 TTCAATACCTTTCCAAACAACCAA 57.454 33.333 0.00 0.00 0.00 3.67
44 45 6.546428 TCAATACCTTTCCAAACAACCAAA 57.454 33.333 0.00 0.00 0.00 3.28
45 46 6.578023 TCAATACCTTTCCAAACAACCAAAG 58.422 36.000 0.00 0.00 0.00 2.77
46 47 6.381420 TCAATACCTTTCCAAACAACCAAAGA 59.619 34.615 0.00 0.00 0.00 2.52
47 48 6.800072 ATACCTTTCCAAACAACCAAAGAA 57.200 33.333 0.00 0.00 0.00 2.52
48 49 5.692115 ACCTTTCCAAACAACCAAAGAAT 57.308 34.783 0.00 0.00 0.00 2.40
49 50 6.061022 ACCTTTCCAAACAACCAAAGAATT 57.939 33.333 0.00 0.00 0.00 2.17
50 51 7.189079 ACCTTTCCAAACAACCAAAGAATTA 57.811 32.000 0.00 0.00 0.00 1.40
51 52 7.045416 ACCTTTCCAAACAACCAAAGAATTAC 58.955 34.615 0.00 0.00 0.00 1.89
52 53 6.481976 CCTTTCCAAACAACCAAAGAATTACC 59.518 38.462 0.00 0.00 0.00 2.85
53 54 6.800072 TTCCAAACAACCAAAGAATTACCT 57.200 33.333 0.00 0.00 0.00 3.08
54 55 6.155475 TCCAAACAACCAAAGAATTACCTG 57.845 37.500 0.00 0.00 0.00 4.00
55 56 5.894393 TCCAAACAACCAAAGAATTACCTGA 59.106 36.000 0.00 0.00 0.00 3.86
56 57 6.381420 TCCAAACAACCAAAGAATTACCTGAA 59.619 34.615 0.00 0.00 0.00 3.02
57 58 7.044798 CCAAACAACCAAAGAATTACCTGAAA 58.955 34.615 0.00 0.00 0.00 2.69
58 59 7.550906 CCAAACAACCAAAGAATTACCTGAAAA 59.449 33.333 0.00 0.00 0.00 2.29
59 60 9.108284 CAAACAACCAAAGAATTACCTGAAAAT 57.892 29.630 0.00 0.00 0.00 1.82
61 62 9.758651 AACAACCAAAGAATTACCTGAAAATAC 57.241 29.630 0.00 0.00 0.00 1.89
62 63 8.364894 ACAACCAAAGAATTACCTGAAAATACC 58.635 33.333 0.00 0.00 0.00 2.73
63 64 7.153217 ACCAAAGAATTACCTGAAAATACCG 57.847 36.000 0.00 0.00 0.00 4.02
64 65 6.717997 ACCAAAGAATTACCTGAAAATACCGT 59.282 34.615 0.00 0.00 0.00 4.83
65 66 7.027161 CCAAAGAATTACCTGAAAATACCGTG 58.973 38.462 0.00 0.00 0.00 4.94
66 67 7.308951 CCAAAGAATTACCTGAAAATACCGTGT 60.309 37.037 0.00 0.00 0.00 4.49
67 68 6.980051 AGAATTACCTGAAAATACCGTGTC 57.020 37.500 0.00 0.00 0.00 3.67
68 69 5.878669 AGAATTACCTGAAAATACCGTGTCC 59.121 40.000 0.00 0.00 0.00 4.02
69 70 4.620589 TTACCTGAAAATACCGTGTCCA 57.379 40.909 0.00 0.00 0.00 4.02
70 71 3.053831 ACCTGAAAATACCGTGTCCAG 57.946 47.619 0.00 0.00 0.00 3.86
71 72 2.635915 ACCTGAAAATACCGTGTCCAGA 59.364 45.455 0.00 0.00 0.00 3.86
72 73 3.071892 ACCTGAAAATACCGTGTCCAGAA 59.928 43.478 0.00 0.00 0.00 3.02
73 74 3.684788 CCTGAAAATACCGTGTCCAGAAG 59.315 47.826 0.00 0.00 0.00 2.85
74 75 4.562757 CCTGAAAATACCGTGTCCAGAAGA 60.563 45.833 0.00 0.00 0.00 2.87
75 76 5.160607 TGAAAATACCGTGTCCAGAAGAT 57.839 39.130 0.00 0.00 0.00 2.40
76 77 5.556915 TGAAAATACCGTGTCCAGAAGATT 58.443 37.500 0.00 0.00 0.00 2.40
77 78 5.642063 TGAAAATACCGTGTCCAGAAGATTC 59.358 40.000 0.00 0.00 0.00 2.52
78 79 5.422214 AAATACCGTGTCCAGAAGATTCT 57.578 39.130 0.00 0.00 38.25 2.40
79 80 4.657436 ATACCGTGTCCAGAAGATTCTC 57.343 45.455 0.00 0.00 34.74 2.87
80 81 2.248248 ACCGTGTCCAGAAGATTCTCA 58.752 47.619 0.00 0.00 34.74 3.27
81 82 2.834549 ACCGTGTCCAGAAGATTCTCAT 59.165 45.455 0.00 0.00 34.74 2.90
82 83 3.261897 ACCGTGTCCAGAAGATTCTCATT 59.738 43.478 0.00 0.00 34.74 2.57
83 84 3.868077 CCGTGTCCAGAAGATTCTCATTC 59.132 47.826 0.00 0.00 34.74 2.67
84 85 3.549471 CGTGTCCAGAAGATTCTCATTCG 59.451 47.826 0.00 0.00 34.74 3.34
85 86 3.868077 GTGTCCAGAAGATTCTCATTCGG 59.132 47.826 0.00 0.00 34.74 4.30
86 87 3.118629 TGTCCAGAAGATTCTCATTCGGG 60.119 47.826 0.00 0.00 40.75 5.14
87 88 3.107601 TCCAGAAGATTCTCATTCGGGT 58.892 45.455 4.45 0.00 40.41 5.28
88 89 4.099573 GTCCAGAAGATTCTCATTCGGGTA 59.900 45.833 4.45 0.00 40.41 3.69
89 90 4.714802 TCCAGAAGATTCTCATTCGGGTAA 59.285 41.667 4.45 0.00 40.41 2.85
90 91 5.366768 TCCAGAAGATTCTCATTCGGGTAAT 59.633 40.000 4.45 0.00 40.41 1.89
91 92 6.553476 TCCAGAAGATTCTCATTCGGGTAATA 59.447 38.462 4.45 0.00 40.41 0.98
92 93 7.235606 TCCAGAAGATTCTCATTCGGGTAATAT 59.764 37.037 4.45 0.00 40.41 1.28
93 94 7.880195 CCAGAAGATTCTCATTCGGGTAATATT 59.120 37.037 0.00 0.00 36.42 1.28
94 95 9.277783 CAGAAGATTCTCATTCGGGTAATATTT 57.722 33.333 0.00 0.00 34.74 1.40
95 96 9.495572 AGAAGATTCTCATTCGGGTAATATTTC 57.504 33.333 0.00 0.00 29.94 2.17
96 97 9.273016 GAAGATTCTCATTCGGGTAATATTTCA 57.727 33.333 0.00 0.00 0.00 2.69
97 98 8.608844 AGATTCTCATTCGGGTAATATTTCAC 57.391 34.615 0.00 0.00 0.00 3.18
98 99 8.432805 AGATTCTCATTCGGGTAATATTTCACT 58.567 33.333 0.00 0.00 0.00 3.41
99 100 8.608844 ATTCTCATTCGGGTAATATTTCACTC 57.391 34.615 0.00 0.00 0.00 3.51
100 101 7.119709 TCTCATTCGGGTAATATTTCACTCA 57.880 36.000 0.00 0.00 0.00 3.41
101 102 7.561251 TCTCATTCGGGTAATATTTCACTCAA 58.439 34.615 0.00 0.00 0.00 3.02
102 103 8.044309 TCTCATTCGGGTAATATTTCACTCAAA 58.956 33.333 0.00 0.00 0.00 2.69
103 104 8.208718 TCATTCGGGTAATATTTCACTCAAAG 57.791 34.615 0.00 0.00 0.00 2.77
104 105 6.431198 TTCGGGTAATATTTCACTCAAAGC 57.569 37.500 0.00 0.00 0.00 3.51
105 106 5.492895 TCGGGTAATATTTCACTCAAAGCA 58.507 37.500 0.00 0.00 0.00 3.91
106 107 5.584649 TCGGGTAATATTTCACTCAAAGCAG 59.415 40.000 0.00 0.00 0.00 4.24
107 108 5.584649 CGGGTAATATTTCACTCAAAGCAGA 59.415 40.000 0.00 0.00 0.00 4.26
108 109 6.260936 CGGGTAATATTTCACTCAAAGCAGAT 59.739 38.462 0.00 0.00 0.00 2.90
109 110 7.420800 GGGTAATATTTCACTCAAAGCAGATG 58.579 38.462 0.00 0.00 0.00 2.90
110 111 7.283127 GGGTAATATTTCACTCAAAGCAGATGA 59.717 37.037 0.00 0.00 0.00 2.92
112 113 4.698583 ATTTCACTCAAAGCAGATGAGC 57.301 40.909 11.84 0.00 46.56 4.26
113 114 2.845363 TCACTCAAAGCAGATGAGCA 57.155 45.000 11.84 0.00 46.56 4.26
114 115 3.345508 TCACTCAAAGCAGATGAGCAT 57.654 42.857 11.84 0.00 46.56 3.79
115 116 4.476628 TCACTCAAAGCAGATGAGCATA 57.523 40.909 11.84 0.00 46.56 3.14
116 117 4.186926 TCACTCAAAGCAGATGAGCATAC 58.813 43.478 11.84 0.00 46.56 2.39
117 118 3.937079 CACTCAAAGCAGATGAGCATACA 59.063 43.478 11.84 0.00 46.56 2.29
118 119 4.393990 CACTCAAAGCAGATGAGCATACAA 59.606 41.667 11.84 0.00 46.56 2.41
119 120 5.005740 ACTCAAAGCAGATGAGCATACAAA 58.994 37.500 11.84 0.00 46.56 2.83
120 121 5.106396 ACTCAAAGCAGATGAGCATACAAAC 60.106 40.000 11.84 0.00 46.56 2.93
121 122 5.005740 TCAAAGCAGATGAGCATACAAACT 58.994 37.500 0.00 0.00 36.85 2.66
122 123 6.172630 TCAAAGCAGATGAGCATACAAACTA 58.827 36.000 0.00 0.00 36.85 2.24
123 124 6.825213 TCAAAGCAGATGAGCATACAAACTAT 59.175 34.615 0.00 0.00 36.85 2.12
124 125 6.857777 AAGCAGATGAGCATACAAACTATC 57.142 37.500 0.00 0.00 36.85 2.08
125 126 5.303971 AGCAGATGAGCATACAAACTATCC 58.696 41.667 0.00 0.00 36.85 2.59
126 127 4.151335 GCAGATGAGCATACAAACTATCCG 59.849 45.833 0.00 0.00 0.00 4.18
127 128 4.687948 CAGATGAGCATACAAACTATCCGG 59.312 45.833 0.00 0.00 0.00 5.14
128 129 4.588951 AGATGAGCATACAAACTATCCGGA 59.411 41.667 6.61 6.61 0.00 5.14
129 130 4.322080 TGAGCATACAAACTATCCGGAG 57.678 45.455 11.34 0.00 0.00 4.63
130 131 3.704566 TGAGCATACAAACTATCCGGAGT 59.295 43.478 11.34 3.31 0.00 3.85
131 132 4.161565 TGAGCATACAAACTATCCGGAGTT 59.838 41.667 11.34 6.80 41.50 3.01
133 134 5.116882 AGCATACAAACTATCCGGAGTTTC 58.883 41.667 16.60 7.56 44.52 2.78
134 135 4.873827 GCATACAAACTATCCGGAGTTTCA 59.126 41.667 16.60 9.70 44.52 2.69
135 136 5.353123 GCATACAAACTATCCGGAGTTTCAA 59.647 40.000 16.60 9.68 44.52 2.69
136 137 6.038271 GCATACAAACTATCCGGAGTTTCAAT 59.962 38.462 16.60 11.18 44.52 2.57
137 138 7.415206 GCATACAAACTATCCGGAGTTTCAATT 60.415 37.037 16.60 6.65 44.52 2.32
138 139 9.104965 CATACAAACTATCCGGAGTTTCAATTA 57.895 33.333 16.60 8.21 44.52 1.40
139 140 7.989416 ACAAACTATCCGGAGTTTCAATTAA 57.011 32.000 16.60 0.00 44.52 1.40
140 141 8.575649 ACAAACTATCCGGAGTTTCAATTAAT 57.424 30.769 16.60 0.00 44.52 1.40
141 142 8.674607 ACAAACTATCCGGAGTTTCAATTAATC 58.325 33.333 16.60 0.00 44.52 1.75
142 143 7.478520 AACTATCCGGAGTTTCAATTAATCG 57.521 36.000 11.34 0.00 36.19 3.34
143 144 4.813296 ATCCGGAGTTTCAATTAATCGC 57.187 40.909 11.34 0.00 0.00 4.58
144 145 2.940410 TCCGGAGTTTCAATTAATCGCC 59.060 45.455 0.00 0.00 0.00 5.54
145 146 2.680841 CCGGAGTTTCAATTAATCGCCA 59.319 45.455 0.00 0.00 29.71 5.69
146 147 3.127895 CCGGAGTTTCAATTAATCGCCAA 59.872 43.478 0.00 0.00 29.71 4.52
147 148 4.342772 CGGAGTTTCAATTAATCGCCAAG 58.657 43.478 0.00 0.00 29.71 3.61
148 149 4.105486 GGAGTTTCAATTAATCGCCAAGC 58.895 43.478 0.00 0.00 29.71 4.01
149 150 4.105486 GAGTTTCAATTAATCGCCAAGCC 58.895 43.478 0.00 0.00 0.00 4.35
150 151 3.763897 AGTTTCAATTAATCGCCAAGCCT 59.236 39.130 0.00 0.00 0.00 4.58
151 152 3.781079 TTCAATTAATCGCCAAGCCTG 57.219 42.857 0.00 0.00 0.00 4.85
152 153 2.722094 TCAATTAATCGCCAAGCCTGT 58.278 42.857 0.00 0.00 0.00 4.00
153 154 3.088532 TCAATTAATCGCCAAGCCTGTT 58.911 40.909 0.00 0.00 0.00 3.16
154 155 3.509575 TCAATTAATCGCCAAGCCTGTTT 59.490 39.130 0.00 0.00 0.00 2.83
155 156 4.702612 TCAATTAATCGCCAAGCCTGTTTA 59.297 37.500 0.00 0.00 0.00 2.01
156 157 4.900635 ATTAATCGCCAAGCCTGTTTAG 57.099 40.909 0.00 0.00 0.00 1.85
157 158 0.811281 AATCGCCAAGCCTGTTTAGC 59.189 50.000 0.00 0.00 0.00 3.09
158 159 0.035056 ATCGCCAAGCCTGTTTAGCT 60.035 50.000 0.00 0.00 44.19 3.32
159 160 0.611200 TCGCCAAGCCTGTTTAGCTA 59.389 50.000 0.00 0.00 40.49 3.32
160 161 1.002659 TCGCCAAGCCTGTTTAGCTAA 59.997 47.619 0.86 0.86 40.49 3.09
161 162 1.130561 CGCCAAGCCTGTTTAGCTAAC 59.869 52.381 5.45 2.54 40.49 2.34
162 163 2.159382 GCCAAGCCTGTTTAGCTAACA 58.841 47.619 5.45 7.08 44.31 2.41
163 164 2.556622 GCCAAGCCTGTTTAGCTAACAA 59.443 45.455 5.45 0.00 45.69 2.83
164 165 3.366374 GCCAAGCCTGTTTAGCTAACAAG 60.366 47.826 5.45 6.65 45.69 3.16
165 166 3.191371 CCAAGCCTGTTTAGCTAACAAGG 59.809 47.826 21.81 21.81 45.69 3.61
166 167 2.921634 GCCTGTTTAGCTAACAAGGC 57.078 50.000 29.49 29.49 45.69 4.35
167 168 2.437413 GCCTGTTTAGCTAACAAGGCT 58.563 47.619 32.75 0.00 46.37 4.58
168 169 2.820197 GCCTGTTTAGCTAACAAGGCTT 59.180 45.455 32.75 0.00 46.37 4.35
169 170 3.366374 GCCTGTTTAGCTAACAAGGCTTG 60.366 47.826 32.75 25.06 46.37 4.01
170 171 4.072131 CCTGTTTAGCTAACAAGGCTTGA 58.928 43.478 32.50 11.27 45.69 3.02
171 172 4.702131 CCTGTTTAGCTAACAAGGCTTGAT 59.298 41.667 32.50 23.54 45.69 2.57
172 173 5.183904 CCTGTTTAGCTAACAAGGCTTGATT 59.816 40.000 32.50 22.71 45.69 2.57
173 174 6.374333 CCTGTTTAGCTAACAAGGCTTGATTA 59.626 38.462 32.50 22.63 45.69 1.75
174 175 7.094377 CCTGTTTAGCTAACAAGGCTTGATTAA 60.094 37.037 32.50 17.95 45.69 1.40
175 176 8.172352 TGTTTAGCTAACAAGGCTTGATTAAA 57.828 30.769 32.50 21.59 43.58 1.52
176 177 8.634444 TGTTTAGCTAACAAGGCTTGATTAAAA 58.366 29.630 32.50 19.33 43.58 1.52
177 178 9.129209 GTTTAGCTAACAAGGCTTGATTAAAAG 57.871 33.333 32.50 15.99 40.74 2.27
184 185 2.584492 GCTTGATTAAAAGCCCGCAT 57.416 45.000 1.09 0.00 45.60 4.73
185 186 3.708563 GCTTGATTAAAAGCCCGCATA 57.291 42.857 1.09 0.00 45.60 3.14
186 187 4.243007 GCTTGATTAAAAGCCCGCATAT 57.757 40.909 1.09 0.00 45.60 1.78
187 188 4.229876 GCTTGATTAAAAGCCCGCATATC 58.770 43.478 1.09 0.00 45.60 1.63
188 189 4.022849 GCTTGATTAAAAGCCCGCATATCT 60.023 41.667 1.09 0.00 45.60 1.98
189 190 5.507985 GCTTGATTAAAAGCCCGCATATCTT 60.508 40.000 1.09 0.00 45.60 2.40
190 191 6.463995 TTGATTAAAAGCCCGCATATCTTT 57.536 33.333 0.00 0.00 0.00 2.52
191 192 7.575414 TTGATTAAAAGCCCGCATATCTTTA 57.425 32.000 0.00 0.00 30.66 1.85
192 193 7.575414 TGATTAAAAGCCCGCATATCTTTAA 57.425 32.000 0.00 0.00 30.66 1.52
193 194 8.001881 TGATTAAAAGCCCGCATATCTTTAAA 57.998 30.769 0.00 0.00 30.66 1.52
194 195 7.918562 TGATTAAAAGCCCGCATATCTTTAAAC 59.081 33.333 0.00 0.00 30.66 2.01
195 196 4.649088 AAAGCCCGCATATCTTTAAACC 57.351 40.909 0.00 0.00 0.00 3.27
196 197 2.583143 AGCCCGCATATCTTTAAACCC 58.417 47.619 0.00 0.00 0.00 4.11
197 198 1.611977 GCCCGCATATCTTTAAACCCC 59.388 52.381 0.00 0.00 0.00 4.95
198 199 1.877443 CCCGCATATCTTTAAACCCCG 59.123 52.381 0.00 0.00 0.00 5.73
199 200 2.567985 CCGCATATCTTTAAACCCCGT 58.432 47.619 0.00 0.00 0.00 5.28
200 201 3.494749 CCCGCATATCTTTAAACCCCGTA 60.495 47.826 0.00 0.00 0.00 4.02
201 202 3.495753 CCGCATATCTTTAAACCCCGTAC 59.504 47.826 0.00 0.00 0.00 3.67
202 203 3.495753 CGCATATCTTTAAACCCCGTACC 59.504 47.826 0.00 0.00 0.00 3.34
203 204 4.453751 GCATATCTTTAAACCCCGTACCA 58.546 43.478 0.00 0.00 0.00 3.25
204 205 5.067954 GCATATCTTTAAACCCCGTACCAT 58.932 41.667 0.00 0.00 0.00 3.55
205 206 5.180680 GCATATCTTTAAACCCCGTACCATC 59.819 44.000 0.00 0.00 0.00 3.51
206 207 3.632643 TCTTTAAACCCCGTACCATCC 57.367 47.619 0.00 0.00 0.00 3.51
207 208 3.183801 TCTTTAAACCCCGTACCATCCT 58.816 45.455 0.00 0.00 0.00 3.24
208 209 3.588396 TCTTTAAACCCCGTACCATCCTT 59.412 43.478 0.00 0.00 0.00 3.36
209 210 4.782156 TCTTTAAACCCCGTACCATCCTTA 59.218 41.667 0.00 0.00 0.00 2.69
210 211 4.758773 TTAAACCCCGTACCATCCTTAG 57.241 45.455 0.00 0.00 0.00 2.18
211 212 2.555732 AACCCCGTACCATCCTTAGA 57.444 50.000 0.00 0.00 0.00 2.10
212 213 1.785647 ACCCCGTACCATCCTTAGAC 58.214 55.000 0.00 0.00 0.00 2.59
213 214 1.290130 ACCCCGTACCATCCTTAGACT 59.710 52.381 0.00 0.00 0.00 3.24
214 215 2.292719 ACCCCGTACCATCCTTAGACTT 60.293 50.000 0.00 0.00 0.00 3.01
215 216 2.770232 CCCCGTACCATCCTTAGACTTT 59.230 50.000 0.00 0.00 0.00 2.66
216 217 3.431766 CCCCGTACCATCCTTAGACTTTG 60.432 52.174 0.00 0.00 0.00 2.77
217 218 3.431766 CCCGTACCATCCTTAGACTTTGG 60.432 52.174 0.00 0.00 0.00 3.28
218 219 3.449737 CCGTACCATCCTTAGACTTTGGA 59.550 47.826 0.00 0.00 0.00 3.53
219 220 4.081309 CCGTACCATCCTTAGACTTTGGAA 60.081 45.833 0.00 0.00 33.20 3.53
220 221 5.109903 CGTACCATCCTTAGACTTTGGAAG 58.890 45.833 0.00 0.00 33.20 3.46
221 222 5.105473 CGTACCATCCTTAGACTTTGGAAGA 60.105 44.000 0.00 0.00 33.20 2.87
222 223 5.167303 ACCATCCTTAGACTTTGGAAGAC 57.833 43.478 0.00 0.00 33.20 3.01
223 224 4.184629 CCATCCTTAGACTTTGGAAGACG 58.815 47.826 1.06 0.00 33.20 4.18
224 225 3.314541 TCCTTAGACTTTGGAAGACGC 57.685 47.619 0.00 0.00 0.00 5.19
225 226 2.631062 TCCTTAGACTTTGGAAGACGCA 59.369 45.455 0.00 0.00 0.00 5.24
226 227 3.260884 TCCTTAGACTTTGGAAGACGCAT 59.739 43.478 0.00 0.00 0.00 4.73
227 228 4.003648 CCTTAGACTTTGGAAGACGCATT 58.996 43.478 0.00 0.00 0.00 3.56
228 229 4.455877 CCTTAGACTTTGGAAGACGCATTT 59.544 41.667 0.00 0.00 0.00 2.32
229 230 5.048713 CCTTAGACTTTGGAAGACGCATTTT 60.049 40.000 0.00 0.00 0.00 1.82
230 231 6.148811 CCTTAGACTTTGGAAGACGCATTTTA 59.851 38.462 0.00 0.00 0.00 1.52
231 232 7.148239 CCTTAGACTTTGGAAGACGCATTTTAT 60.148 37.037 0.00 0.00 0.00 1.40
232 233 6.183309 AGACTTTGGAAGACGCATTTTATC 57.817 37.500 0.00 0.00 0.00 1.75
233 234 5.123979 AGACTTTGGAAGACGCATTTTATCC 59.876 40.000 0.00 0.00 0.00 2.59
234 235 4.157840 ACTTTGGAAGACGCATTTTATCCC 59.842 41.667 0.00 0.00 0.00 3.85
235 236 3.358111 TGGAAGACGCATTTTATCCCA 57.642 42.857 0.00 0.00 0.00 4.37
236 237 3.691575 TGGAAGACGCATTTTATCCCAA 58.308 40.909 0.00 0.00 0.00 4.12
237 238 3.442273 TGGAAGACGCATTTTATCCCAAC 59.558 43.478 0.00 0.00 0.00 3.77
238 239 3.694566 GGAAGACGCATTTTATCCCAACT 59.305 43.478 0.00 0.00 0.00 3.16
239 240 4.157840 GGAAGACGCATTTTATCCCAACTT 59.842 41.667 0.00 0.00 0.00 2.66
240 241 5.355910 GGAAGACGCATTTTATCCCAACTTA 59.644 40.000 0.00 0.00 0.00 2.24
241 242 6.436843 AAGACGCATTTTATCCCAACTTAG 57.563 37.500 0.00 0.00 0.00 2.18
242 243 4.335594 AGACGCATTTTATCCCAACTTAGC 59.664 41.667 0.00 0.00 0.00 3.09
243 244 3.380320 ACGCATTTTATCCCAACTTAGCC 59.620 43.478 0.00 0.00 0.00 3.93
244 245 3.380004 CGCATTTTATCCCAACTTAGCCA 59.620 43.478 0.00 0.00 0.00 4.75
245 246 4.142271 CGCATTTTATCCCAACTTAGCCAA 60.142 41.667 0.00 0.00 0.00 4.52
246 247 5.351458 GCATTTTATCCCAACTTAGCCAAG 58.649 41.667 0.00 0.00 37.81 3.61
247 248 5.351458 CATTTTATCCCAACTTAGCCAAGC 58.649 41.667 0.00 0.00 34.94 4.01
248 249 4.316025 TTTATCCCAACTTAGCCAAGCT 57.684 40.909 0.00 0.00 43.41 3.74
249 250 5.444744 TTTATCCCAACTTAGCCAAGCTA 57.555 39.130 0.00 0.00 40.44 3.32
250 251 5.646692 TTATCCCAACTTAGCCAAGCTAT 57.353 39.130 0.00 0.00 41.01 2.97
251 252 4.526438 ATCCCAACTTAGCCAAGCTATT 57.474 40.909 0.00 0.00 41.01 1.73
252 253 4.316025 TCCCAACTTAGCCAAGCTATTT 57.684 40.909 0.00 0.00 41.01 1.40
253 254 4.672899 TCCCAACTTAGCCAAGCTATTTT 58.327 39.130 0.00 0.00 41.01 1.82
254 255 5.083821 TCCCAACTTAGCCAAGCTATTTTT 58.916 37.500 0.00 0.00 41.01 1.94
255 256 5.185056 TCCCAACTTAGCCAAGCTATTTTTC 59.815 40.000 0.00 0.00 41.01 2.29
256 257 5.185828 CCCAACTTAGCCAAGCTATTTTTCT 59.814 40.000 0.00 0.00 41.01 2.52
257 258 6.325596 CCAACTTAGCCAAGCTATTTTTCTC 58.674 40.000 0.00 0.00 41.01 2.87
258 259 6.151817 CCAACTTAGCCAAGCTATTTTTCTCT 59.848 38.462 0.00 0.00 41.01 3.10
259 260 7.309438 CCAACTTAGCCAAGCTATTTTTCTCTT 60.309 37.037 0.00 0.00 41.01 2.85
260 261 7.767250 ACTTAGCCAAGCTATTTTTCTCTTT 57.233 32.000 0.00 0.00 41.01 2.52
261 262 7.821652 ACTTAGCCAAGCTATTTTTCTCTTTC 58.178 34.615 0.00 0.00 41.01 2.62
262 263 5.651387 AGCCAAGCTATTTTTCTCTTTCC 57.349 39.130 0.00 0.00 36.99 3.13
263 264 5.328565 AGCCAAGCTATTTTTCTCTTTCCT 58.671 37.500 0.00 0.00 36.99 3.36
264 265 5.777223 AGCCAAGCTATTTTTCTCTTTCCTT 59.223 36.000 0.00 0.00 36.99 3.36
265 266 6.268617 AGCCAAGCTATTTTTCTCTTTCCTTT 59.731 34.615 0.00 0.00 36.99 3.11
266 267 6.931281 GCCAAGCTATTTTTCTCTTTCCTTTT 59.069 34.615 0.00 0.00 0.00 2.27
267 268 7.442364 GCCAAGCTATTTTTCTCTTTCCTTTTT 59.558 33.333 0.00 0.00 0.00 1.94
268 269 8.982685 CCAAGCTATTTTTCTCTTTCCTTTTTC 58.017 33.333 0.00 0.00 0.00 2.29
269 270 9.533253 CAAGCTATTTTTCTCTTTCCTTTTTCA 57.467 29.630 0.00 0.00 0.00 2.69
275 276 8.731275 TTTTTCTCTTTCCTTTTTCAATTCCC 57.269 30.769 0.00 0.00 0.00 3.97
276 277 6.419484 TTCTCTTTCCTTTTTCAATTCCCC 57.581 37.500 0.00 0.00 0.00 4.81
277 278 5.463154 TCTCTTTCCTTTTTCAATTCCCCA 58.537 37.500 0.00 0.00 0.00 4.96
278 279 6.084060 TCTCTTTCCTTTTTCAATTCCCCAT 58.916 36.000 0.00 0.00 0.00 4.00
279 280 6.558394 TCTCTTTCCTTTTTCAATTCCCCATT 59.442 34.615 0.00 0.00 0.00 3.16
280 281 7.732593 TCTCTTTCCTTTTTCAATTCCCCATTA 59.267 33.333 0.00 0.00 0.00 1.90
281 282 8.268878 TCTTTCCTTTTTCAATTCCCCATTAA 57.731 30.769 0.00 0.00 0.00 1.40
282 283 8.889445 TCTTTCCTTTTTCAATTCCCCATTAAT 58.111 29.630 0.00 0.00 0.00 1.40
284 285 9.952030 TTTCCTTTTTCAATTCCCCATTAATAC 57.048 29.630 0.00 0.00 0.00 1.89
285 286 8.909423 TCCTTTTTCAATTCCCCATTAATACT 57.091 30.769 0.00 0.00 0.00 2.12
286 287 8.757877 TCCTTTTTCAATTCCCCATTAATACTG 58.242 33.333 0.00 0.00 0.00 2.74
287 288 7.495606 CCTTTTTCAATTCCCCATTAATACTGC 59.504 37.037 0.00 0.00 0.00 4.40
288 289 6.478512 TTTCAATTCCCCATTAATACTGCC 57.521 37.500 0.00 0.00 0.00 4.85
289 290 5.402054 TCAATTCCCCATTAATACTGCCT 57.598 39.130 0.00 0.00 0.00 4.75
290 291 5.385198 TCAATTCCCCATTAATACTGCCTC 58.615 41.667 0.00 0.00 0.00 4.70
291 292 5.103728 TCAATTCCCCATTAATACTGCCTCA 60.104 40.000 0.00 0.00 0.00 3.86
292 293 5.605540 ATTCCCCATTAATACTGCCTCAT 57.394 39.130 0.00 0.00 0.00 2.90
293 294 4.640771 TCCCCATTAATACTGCCTCATC 57.359 45.455 0.00 0.00 0.00 2.92
294 295 3.980022 TCCCCATTAATACTGCCTCATCA 59.020 43.478 0.00 0.00 0.00 3.07
295 296 4.415179 TCCCCATTAATACTGCCTCATCAA 59.585 41.667 0.00 0.00 0.00 2.57
296 297 5.103728 TCCCCATTAATACTGCCTCATCAAA 60.104 40.000 0.00 0.00 0.00 2.69
297 298 5.010012 CCCCATTAATACTGCCTCATCAAAC 59.990 44.000 0.00 0.00 0.00 2.93
298 299 5.593909 CCCATTAATACTGCCTCATCAAACA 59.406 40.000 0.00 0.00 0.00 2.83
299 300 6.460123 CCCATTAATACTGCCTCATCAAACAC 60.460 42.308 0.00 0.00 0.00 3.32
300 301 6.319658 CCATTAATACTGCCTCATCAAACACT 59.680 38.462 0.00 0.00 0.00 3.55
301 302 6.985188 TTAATACTGCCTCATCAAACACTC 57.015 37.500 0.00 0.00 0.00 3.51
302 303 4.833478 ATACTGCCTCATCAAACACTCT 57.167 40.909 0.00 0.00 0.00 3.24
303 304 3.498774 ACTGCCTCATCAAACACTCTT 57.501 42.857 0.00 0.00 0.00 2.85
304 305 3.406764 ACTGCCTCATCAAACACTCTTC 58.593 45.455 0.00 0.00 0.00 2.87
305 306 2.746362 CTGCCTCATCAAACACTCTTCC 59.254 50.000 0.00 0.00 0.00 3.46
306 307 2.106338 TGCCTCATCAAACACTCTTCCA 59.894 45.455 0.00 0.00 0.00 3.53
307 308 3.245016 TGCCTCATCAAACACTCTTCCAT 60.245 43.478 0.00 0.00 0.00 3.41
308 309 3.760684 GCCTCATCAAACACTCTTCCATT 59.239 43.478 0.00 0.00 0.00 3.16
309 310 4.943705 GCCTCATCAAACACTCTTCCATTA 59.056 41.667 0.00 0.00 0.00 1.90
310 311 5.591877 GCCTCATCAAACACTCTTCCATTAT 59.408 40.000 0.00 0.00 0.00 1.28
311 312 6.096001 GCCTCATCAAACACTCTTCCATTATT 59.904 38.462 0.00 0.00 0.00 1.40
312 313 7.363268 GCCTCATCAAACACTCTTCCATTATTT 60.363 37.037 0.00 0.00 0.00 1.40
313 314 8.526147 CCTCATCAAACACTCTTCCATTATTTT 58.474 33.333 0.00 0.00 0.00 1.82
314 315 9.918630 CTCATCAAACACTCTTCCATTATTTTT 57.081 29.630 0.00 0.00 0.00 1.94
338 339 9.601971 TTTTTGTAGTTTTATAATCGTGCACTC 57.398 29.630 16.19 0.00 0.00 3.51
339 340 6.897259 TGTAGTTTTATAATCGTGCACTCC 57.103 37.500 16.19 0.00 0.00 3.85
340 341 6.399743 TGTAGTTTTATAATCGTGCACTCCA 58.600 36.000 16.19 0.00 0.00 3.86
341 342 7.045416 TGTAGTTTTATAATCGTGCACTCCAT 58.955 34.615 16.19 5.39 0.00 3.41
342 343 7.551262 TGTAGTTTTATAATCGTGCACTCCATT 59.449 33.333 16.19 12.22 0.00 3.16
343 344 7.391148 AGTTTTATAATCGTGCACTCCATTT 57.609 32.000 16.19 3.82 0.00 2.32
344 345 7.472543 AGTTTTATAATCGTGCACTCCATTTC 58.527 34.615 16.19 0.00 0.00 2.17
345 346 6.993786 TTTATAATCGTGCACTCCATTTCA 57.006 33.333 16.19 0.00 0.00 2.69
346 347 7.566760 TTTATAATCGTGCACTCCATTTCAT 57.433 32.000 16.19 4.80 0.00 2.57
347 348 8.669946 TTTATAATCGTGCACTCCATTTCATA 57.330 30.769 16.19 3.95 0.00 2.15
348 349 8.669946 TTATAATCGTGCACTCCATTTCATAA 57.330 30.769 16.19 8.96 0.00 1.90
349 350 7.750229 ATAATCGTGCACTCCATTTCATAAT 57.250 32.000 16.19 0.00 0.00 1.28
350 351 6.455360 AATCGTGCACTCCATTTCATAATT 57.545 33.333 16.19 0.00 0.00 1.40
351 352 5.484173 TCGTGCACTCCATTTCATAATTC 57.516 39.130 16.19 0.00 0.00 2.17
352 353 5.185454 TCGTGCACTCCATTTCATAATTCT 58.815 37.500 16.19 0.00 0.00 2.40
353 354 6.345298 TCGTGCACTCCATTTCATAATTCTA 58.655 36.000 16.19 0.00 0.00 2.10
354 355 6.992123 TCGTGCACTCCATTTCATAATTCTAT 59.008 34.615 16.19 0.00 0.00 1.98
355 356 7.498900 TCGTGCACTCCATTTCATAATTCTATT 59.501 33.333 16.19 0.00 0.00 1.73
356 357 8.131100 CGTGCACTCCATTTCATAATTCTATTT 58.869 33.333 16.19 0.00 0.00 1.40
357 358 9.807649 GTGCACTCCATTTCATAATTCTATTTT 57.192 29.630 10.32 0.00 0.00 1.82
358 359 9.806203 TGCACTCCATTTCATAATTCTATTTTG 57.194 29.630 0.00 0.00 0.00 2.44
374 375 9.829507 ATTCTATTTTGAACCAAAATCACAACA 57.170 25.926 17.63 3.06 46.82 3.33
375 376 9.658799 TTCTATTTTGAACCAAAATCACAACAA 57.341 25.926 17.63 2.49 46.82 2.83
376 377 9.311916 TCTATTTTGAACCAAAATCACAACAAG 57.688 29.630 17.63 10.16 46.82 3.16
377 378 9.311916 CTATTTTGAACCAAAATCACAACAAGA 57.688 29.630 17.63 1.36 46.82 3.02
378 379 7.969536 TTTTGAACCAAAATCACAACAAGAA 57.030 28.000 1.19 0.00 38.24 2.52
379 380 8.558973 TTTTGAACCAAAATCACAACAAGAAT 57.441 26.923 1.19 0.00 38.24 2.40
380 381 8.558973 TTTGAACCAAAATCACAACAAGAATT 57.441 26.923 0.00 0.00 29.89 2.17
381 382 9.658799 TTTGAACCAAAATCACAACAAGAATTA 57.341 25.926 0.00 0.00 29.89 1.40
382 383 9.829507 TTGAACCAAAATCACAACAAGAATTAT 57.170 25.926 0.00 0.00 0.00 1.28
383 384 9.258826 TGAACCAAAATCACAACAAGAATTATG 57.741 29.630 0.00 0.00 0.00 1.90
384 385 8.606040 AACCAAAATCACAACAAGAATTATGG 57.394 30.769 0.00 0.00 0.00 2.74
385 386 7.961351 ACCAAAATCACAACAAGAATTATGGA 58.039 30.769 0.00 0.00 0.00 3.41
386 387 8.090214 ACCAAAATCACAACAAGAATTATGGAG 58.910 33.333 0.00 0.00 0.00 3.86
387 388 7.063780 CCAAAATCACAACAAGAATTATGGAGC 59.936 37.037 0.00 0.00 0.00 4.70
388 389 5.841957 ATCACAACAAGAATTATGGAGCC 57.158 39.130 0.00 0.00 0.00 4.70
389 390 4.661222 TCACAACAAGAATTATGGAGCCA 58.339 39.130 0.00 0.00 0.00 4.75
390 391 5.076182 TCACAACAAGAATTATGGAGCCAA 58.924 37.500 0.00 0.00 0.00 4.52
391 392 5.538053 TCACAACAAGAATTATGGAGCCAAA 59.462 36.000 0.00 0.00 0.00 3.28
392 393 5.634859 CACAACAAGAATTATGGAGCCAAAC 59.365 40.000 0.00 0.00 0.00 2.93
393 394 5.304101 ACAACAAGAATTATGGAGCCAAACA 59.696 36.000 0.00 0.00 0.00 2.83
394 395 6.183360 ACAACAAGAATTATGGAGCCAAACAA 60.183 34.615 0.00 0.00 0.00 2.83
395 396 6.418057 ACAAGAATTATGGAGCCAAACAAA 57.582 33.333 0.00 0.00 0.00 2.83
396 397 7.008021 ACAAGAATTATGGAGCCAAACAAAT 57.992 32.000 0.00 0.00 0.00 2.32
397 398 7.452562 ACAAGAATTATGGAGCCAAACAAATT 58.547 30.769 0.00 0.00 0.00 1.82
398 399 7.388500 ACAAGAATTATGGAGCCAAACAAATTG 59.612 33.333 0.00 0.00 38.84 2.32
421 422 5.971763 GGATACAAGAGAACATGACACTCT 58.028 41.667 0.00 7.43 41.86 3.24
422 423 7.101652 GGATACAAGAGAACATGACACTCTA 57.898 40.000 16.38 6.70 39.63 2.43
423 424 7.721402 GGATACAAGAGAACATGACACTCTAT 58.279 38.462 16.38 12.21 39.63 1.98
424 425 8.200792 GGATACAAGAGAACATGACACTCTATT 58.799 37.037 16.38 11.21 39.63 1.73
425 426 9.593134 GATACAAGAGAACATGACACTCTATTT 57.407 33.333 16.38 9.59 39.63 1.40
426 427 9.950496 ATACAAGAGAACATGACACTCTATTTT 57.050 29.630 16.38 6.09 39.63 1.82
427 428 8.682936 ACAAGAGAACATGACACTCTATTTTT 57.317 30.769 16.38 3.98 39.63 1.94
428 429 9.778741 ACAAGAGAACATGACACTCTATTTTTA 57.221 29.630 16.38 0.00 39.63 1.52
430 431 8.467402 AGAGAACATGACACTCTATTTTTACG 57.533 34.615 15.19 0.00 38.91 3.18
431 432 8.088981 AGAGAACATGACACTCTATTTTTACGT 58.911 33.333 15.19 0.00 38.91 3.57
432 433 8.018677 AGAACATGACACTCTATTTTTACGTG 57.981 34.615 0.00 0.00 0.00 4.49
433 434 7.656137 AGAACATGACACTCTATTTTTACGTGT 59.344 33.333 0.00 0.00 41.09 4.49
434 435 7.724305 ACATGACACTCTATTTTTACGTGTT 57.276 32.000 0.00 0.00 38.77 3.32
435 436 8.149973 ACATGACACTCTATTTTTACGTGTTT 57.850 30.769 0.00 0.00 38.77 2.83
436 437 8.617809 ACATGACACTCTATTTTTACGTGTTTT 58.382 29.630 0.00 0.00 38.77 2.43
437 438 9.103048 CATGACACTCTATTTTTACGTGTTTTC 57.897 33.333 0.00 0.00 38.77 2.29
438 439 8.199176 TGACACTCTATTTTTACGTGTTTTCA 57.801 30.769 0.00 0.00 38.77 2.69
439 440 8.832521 TGACACTCTATTTTTACGTGTTTTCAT 58.167 29.630 0.00 0.00 38.77 2.57
440 441 9.659830 GACACTCTATTTTTACGTGTTTTCATT 57.340 29.630 0.00 0.00 38.77 2.57
441 442 9.659830 ACACTCTATTTTTACGTGTTTTCATTC 57.340 29.630 0.00 0.00 35.48 2.67
442 443 9.113876 CACTCTATTTTTACGTGTTTTCATTCC 57.886 33.333 0.00 0.00 0.00 3.01
443 444 9.063615 ACTCTATTTTTACGTGTTTTCATTCCT 57.936 29.630 0.00 0.00 0.00 3.36
444 445 9.893305 CTCTATTTTTACGTGTTTTCATTCCTT 57.107 29.630 0.00 0.00 0.00 3.36
445 446 9.887406 TCTATTTTTACGTGTTTTCATTCCTTC 57.113 29.630 0.00 0.00 0.00 3.46
446 447 9.672086 CTATTTTTACGTGTTTTCATTCCTTCA 57.328 29.630 0.00 0.00 0.00 3.02
448 449 8.934507 TTTTTACGTGTTTTCATTCCTTCATT 57.065 26.923 0.00 0.00 0.00 2.57
449 450 8.934507 TTTTACGTGTTTTCATTCCTTCATTT 57.065 26.923 0.00 0.00 0.00 2.32
450 451 8.934507 TTTACGTGTTTTCATTCCTTCATTTT 57.065 26.923 0.00 0.00 0.00 1.82
451 452 6.826893 ACGTGTTTTCATTCCTTCATTTTG 57.173 33.333 0.00 0.00 0.00 2.44
452 453 6.568869 ACGTGTTTTCATTCCTTCATTTTGA 58.431 32.000 0.00 0.00 0.00 2.69
453 454 6.697019 ACGTGTTTTCATTCCTTCATTTTGAG 59.303 34.615 0.00 0.00 0.00 3.02
454 455 6.917477 CGTGTTTTCATTCCTTCATTTTGAGA 59.083 34.615 0.00 0.00 0.00 3.27
455 456 7.434897 CGTGTTTTCATTCCTTCATTTTGAGAA 59.565 33.333 0.00 0.00 0.00 2.87
456 457 9.264719 GTGTTTTCATTCCTTCATTTTGAGAAT 57.735 29.630 0.00 0.00 0.00 2.40
457 458 9.835389 TGTTTTCATTCCTTCATTTTGAGAATT 57.165 25.926 0.00 0.00 0.00 2.17
470 471 9.701098 TCATTTTGAGAATTCAATTCAAAGAGG 57.299 29.630 12.74 12.02 42.60 3.69
471 472 9.485206 CATTTTGAGAATTCAATTCAAAGAGGT 57.515 29.630 12.74 6.71 42.60 3.85
472 473 9.702494 ATTTTGAGAATTCAATTCAAAGAGGTC 57.298 29.630 12.74 0.21 42.60 3.85
473 474 6.824305 TGAGAATTCAATTCAAAGAGGTCC 57.176 37.500 12.74 0.00 41.71 4.46
474 475 6.546484 TGAGAATTCAATTCAAAGAGGTCCT 58.454 36.000 12.74 0.00 41.71 3.85
475 476 7.689299 TGAGAATTCAATTCAAAGAGGTCCTA 58.311 34.615 12.74 0.00 41.71 2.94
476 477 8.163408 TGAGAATTCAATTCAAAGAGGTCCTAA 58.837 33.333 12.74 0.00 41.71 2.69
477 478 8.940397 AGAATTCAATTCAAAGAGGTCCTAAA 57.060 30.769 12.74 0.00 41.71 1.85
478 479 9.367160 AGAATTCAATTCAAAGAGGTCCTAAAA 57.633 29.630 12.74 0.00 41.71 1.52
480 481 9.933723 AATTCAATTCAAAGAGGTCCTAAAATG 57.066 29.630 0.00 0.00 0.00 2.32
481 482 8.477419 TTCAATTCAAAGAGGTCCTAAAATGT 57.523 30.769 0.00 0.00 0.00 2.71
482 483 8.477419 TCAATTCAAAGAGGTCCTAAAATGTT 57.523 30.769 0.00 0.00 0.00 2.71
483 484 8.923270 TCAATTCAAAGAGGTCCTAAAATGTTT 58.077 29.630 0.00 0.00 0.00 2.83
484 485 9.196552 CAATTCAAAGAGGTCCTAAAATGTTTC 57.803 33.333 0.00 0.00 0.00 2.78
485 486 8.712228 ATTCAAAGAGGTCCTAAAATGTTTCT 57.288 30.769 0.00 0.00 0.00 2.52
486 487 7.745620 TCAAAGAGGTCCTAAAATGTTTCTC 57.254 36.000 0.00 0.00 0.00 2.87
487 488 6.426937 TCAAAGAGGTCCTAAAATGTTTCTCG 59.573 38.462 0.00 0.00 0.00 4.04
488 489 5.740290 AGAGGTCCTAAAATGTTTCTCGA 57.260 39.130 0.00 0.00 0.00 4.04
489 490 6.110411 AGAGGTCCTAAAATGTTTCTCGAA 57.890 37.500 0.00 0.00 0.00 3.71
490 491 6.166982 AGAGGTCCTAAAATGTTTCTCGAAG 58.833 40.000 0.00 0.00 0.00 3.79
491 492 5.866207 AGGTCCTAAAATGTTTCTCGAAGT 58.134 37.500 0.00 0.00 0.00 3.01
492 493 5.932883 AGGTCCTAAAATGTTTCTCGAAGTC 59.067 40.000 0.00 0.00 0.00 3.01
493 494 5.121925 GGTCCTAAAATGTTTCTCGAAGTCC 59.878 44.000 0.00 0.00 0.00 3.85
494 495 5.699458 GTCCTAAAATGTTTCTCGAAGTCCA 59.301 40.000 0.00 0.00 0.00 4.02
642 655 9.915629 GTCATTTACCTAGTCCAATATGAGTAG 57.084 37.037 0.00 0.00 37.81 2.57
643 656 9.656323 TCATTTACCTAGTCCAATATGAGTAGT 57.344 33.333 0.00 0.00 36.81 2.73
656 669 1.133976 TGAGTAGTAGCGAGGTACCCC 60.134 57.143 8.74 0.00 0.00 4.95
657 670 1.142667 GAGTAGTAGCGAGGTACCCCT 59.857 57.143 8.74 5.42 46.66 4.79
845 871 2.425592 CCAGCCGTCTGTCCAACA 59.574 61.111 0.00 0.00 38.66 3.33
945 971 2.289945 GCACACAACCTCCATCTCTTCT 60.290 50.000 0.00 0.00 0.00 2.85
951 977 1.062505 ACCTCCATCTCTTCTCCCCTC 60.063 57.143 0.00 0.00 0.00 4.30
952 978 1.715785 CTCCATCTCTTCTCCCCTCC 58.284 60.000 0.00 0.00 0.00 4.30
953 979 1.220236 CTCCATCTCTTCTCCCCTCCT 59.780 57.143 0.00 0.00 0.00 3.69
954 980 1.219213 TCCATCTCTTCTCCCCTCCTC 59.781 57.143 0.00 0.00 0.00 3.71
955 981 1.220236 CCATCTCTTCTCCCCTCCTCT 59.780 57.143 0.00 0.00 0.00 3.69
956 982 2.597455 CATCTCTTCTCCCCTCCTCTC 58.403 57.143 0.00 0.00 0.00 3.20
957 983 0.930726 TCTCTTCTCCCCTCCTCTCC 59.069 60.000 0.00 0.00 0.00 3.71
958 984 0.105709 CTCTTCTCCCCTCCTCTCCC 60.106 65.000 0.00 0.00 0.00 4.30
959 985 0.556380 TCTTCTCCCCTCCTCTCCCT 60.556 60.000 0.00 0.00 0.00 4.20
960 986 0.105709 CTTCTCCCCTCCTCTCCCTC 60.106 65.000 0.00 0.00 0.00 4.30
977 1003 2.022240 CTCCCGCAGAACCCTAGCTC 62.022 65.000 0.00 0.00 0.00 4.09
978 1004 2.359169 CCCGCAGAACCCTAGCTCA 61.359 63.158 0.00 0.00 0.00 4.26
986 1012 0.036875 AACCCTAGCTCACCACAAGC 59.963 55.000 0.00 0.00 40.14 4.01
1383 1612 6.206829 GGTAGGCCATTATTTGATCTGGTAAC 59.793 42.308 5.01 0.00 34.09 2.50
1471 1701 0.673333 TGCCGTGCAATGTAGGAGTG 60.673 55.000 0.00 0.00 34.76 3.51
1478 1708 2.009774 GCAATGTAGGAGTGCGACATT 58.990 47.619 15.60 15.60 42.97 2.71
1597 1831 2.125673 TTAAGAGGGCGCGTGCTC 60.126 61.111 21.89 18.46 44.16 4.26
1680 1926 0.107831 CGGTTCAGGGTCACCAAGAA 59.892 55.000 0.00 0.00 40.13 2.52
2042 2288 1.547675 GGGTCCTGTTGGCTTTGATGA 60.548 52.381 0.00 0.00 0.00 2.92
2046 2292 2.749076 TCCTGTTGGCTTTGATGATTCG 59.251 45.455 0.00 0.00 0.00 3.34
2328 2574 0.034574 ATGGCGTTAATGGTGGCAGA 60.035 50.000 0.00 0.00 41.70 4.26
2557 2803 7.023575 GCAGTTACTCATTGATTTGGTTAGTG 58.976 38.462 0.00 0.00 0.00 2.74
2626 2872 0.678048 CCTCCTCCCCAGCTTTTTCG 60.678 60.000 0.00 0.00 0.00 3.46
2671 2917 6.382919 TTGGGGCTTCTAAACTAGTTATGT 57.617 37.500 8.92 0.00 0.00 2.29
2793 3041 9.645059 CTTTAGTGTGAGATCTTTGAATCTGTA 57.355 33.333 0.00 0.00 36.13 2.74
2847 3095 6.231951 TGTAAAACGAATCTGGGAACACATA 58.768 36.000 0.00 0.00 35.60 2.29
2848 3096 6.711194 TGTAAAACGAATCTGGGAACACATAA 59.289 34.615 0.00 0.00 35.60 1.90
2849 3097 6.834168 AAAACGAATCTGGGAACACATAAT 57.166 33.333 0.00 0.00 35.60 1.28
3002 3250 8.959548 TGCACTGATCAATTATGATGTTTTAGT 58.040 29.630 0.00 0.00 46.30 2.24
3102 3350 3.835978 TCTTACTAAGCAGGCCACACTTA 59.164 43.478 5.01 8.71 0.00 2.24
3142 3390 4.215827 CCGTCTAATATACCTCTTCACGCT 59.784 45.833 0.00 0.00 0.00 5.07
3278 3526 0.387929 GATTGGTCATGCATGGGCTG 59.612 55.000 25.97 1.90 41.91 4.85
3287 3535 1.849977 TGCATGGGCTGAGCAATAAA 58.150 45.000 6.82 0.00 41.91 1.40
3341 3589 2.874701 CAAGCACGGCTAGCAAGAATAT 59.125 45.455 18.24 0.00 38.25 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.061022 TGAATATGGCCTTCAACTAGTGAA 57.939 37.500 3.32 1.95 44.20 3.18
1 2 5.692115 TGAATATGGCCTTCAACTAGTGA 57.308 39.130 3.32 0.00 29.96 3.41
2 3 6.949352 ATTGAATATGGCCTTCAACTAGTG 57.051 37.500 18.02 0.00 43.31 2.74
3 4 6.998673 GGTATTGAATATGGCCTTCAACTAGT 59.001 38.462 18.02 7.61 43.31 2.57
4 5 7.227156 AGGTATTGAATATGGCCTTCAACTAG 58.773 38.462 18.02 0.00 43.31 2.57
5 6 7.149202 AGGTATTGAATATGGCCTTCAACTA 57.851 36.000 18.02 10.57 43.31 2.24
6 7 6.018433 AGGTATTGAATATGGCCTTCAACT 57.982 37.500 18.02 10.10 43.31 3.16
7 8 6.715347 AAGGTATTGAATATGGCCTTCAAC 57.285 37.500 18.02 9.36 43.31 3.18
8 9 6.323739 GGAAAGGTATTGAATATGGCCTTCAA 59.676 38.462 17.98 17.98 44.28 2.69
9 10 5.833131 GGAAAGGTATTGAATATGGCCTTCA 59.167 40.000 3.32 2.48 35.53 3.02
10 11 5.833131 TGGAAAGGTATTGAATATGGCCTTC 59.167 40.000 3.32 0.00 35.53 3.46
11 12 5.776358 TGGAAAGGTATTGAATATGGCCTT 58.224 37.500 3.32 0.00 37.88 4.35
12 13 5.402054 TGGAAAGGTATTGAATATGGCCT 57.598 39.130 3.32 0.00 0.00 5.19
13 14 6.127196 TGTTTGGAAAGGTATTGAATATGGCC 60.127 38.462 0.00 0.00 0.00 5.36
14 15 6.872920 TGTTTGGAAAGGTATTGAATATGGC 58.127 36.000 0.00 0.00 0.00 4.40
15 16 7.763985 GGTTGTTTGGAAAGGTATTGAATATGG 59.236 37.037 0.00 0.00 0.00 2.74
16 17 8.310382 TGGTTGTTTGGAAAGGTATTGAATATG 58.690 33.333 0.00 0.00 0.00 1.78
17 18 8.429237 TGGTTGTTTGGAAAGGTATTGAATAT 57.571 30.769 0.00 0.00 0.00 1.28
18 19 7.841282 TGGTTGTTTGGAAAGGTATTGAATA 57.159 32.000 0.00 0.00 0.00 1.75
19 20 6.739331 TGGTTGTTTGGAAAGGTATTGAAT 57.261 33.333 0.00 0.00 0.00 2.57
20 21 6.546428 TTGGTTGTTTGGAAAGGTATTGAA 57.454 33.333 0.00 0.00 0.00 2.69
21 22 6.381420 TCTTTGGTTGTTTGGAAAGGTATTGA 59.619 34.615 0.00 0.00 0.00 2.57
22 23 6.578023 TCTTTGGTTGTTTGGAAAGGTATTG 58.422 36.000 0.00 0.00 0.00 1.90
23 24 6.800072 TCTTTGGTTGTTTGGAAAGGTATT 57.200 33.333 0.00 0.00 0.00 1.89
24 25 6.800072 TTCTTTGGTTGTTTGGAAAGGTAT 57.200 33.333 0.00 0.00 0.00 2.73
25 26 6.800072 ATTCTTTGGTTGTTTGGAAAGGTA 57.200 33.333 0.00 0.00 0.00 3.08
26 27 5.692115 ATTCTTTGGTTGTTTGGAAAGGT 57.308 34.783 0.00 0.00 0.00 3.50
27 28 6.481976 GGTAATTCTTTGGTTGTTTGGAAAGG 59.518 38.462 0.00 0.00 0.00 3.11
28 29 7.224557 CAGGTAATTCTTTGGTTGTTTGGAAAG 59.775 37.037 0.00 0.00 0.00 2.62
29 30 7.044798 CAGGTAATTCTTTGGTTGTTTGGAAA 58.955 34.615 0.00 0.00 0.00 3.13
30 31 6.381420 TCAGGTAATTCTTTGGTTGTTTGGAA 59.619 34.615 0.00 0.00 0.00 3.53
31 32 5.894393 TCAGGTAATTCTTTGGTTGTTTGGA 59.106 36.000 0.00 0.00 0.00 3.53
32 33 6.155475 TCAGGTAATTCTTTGGTTGTTTGG 57.845 37.500 0.00 0.00 0.00 3.28
33 34 8.485976 TTTTCAGGTAATTCTTTGGTTGTTTG 57.514 30.769 0.00 0.00 0.00 2.93
35 36 9.758651 GTATTTTCAGGTAATTCTTTGGTTGTT 57.241 29.630 0.00 0.00 0.00 2.83
36 37 8.364894 GGTATTTTCAGGTAATTCTTTGGTTGT 58.635 33.333 0.00 0.00 0.00 3.32
37 38 7.540745 CGGTATTTTCAGGTAATTCTTTGGTTG 59.459 37.037 0.00 0.00 0.00 3.77
38 39 7.231925 ACGGTATTTTCAGGTAATTCTTTGGTT 59.768 33.333 0.00 0.00 0.00 3.67
39 40 6.717997 ACGGTATTTTCAGGTAATTCTTTGGT 59.282 34.615 0.00 0.00 0.00 3.67
40 41 7.027161 CACGGTATTTTCAGGTAATTCTTTGG 58.973 38.462 0.00 0.00 0.00 3.28
41 42 7.590279 ACACGGTATTTTCAGGTAATTCTTTG 58.410 34.615 0.00 0.00 0.00 2.77
42 43 7.094506 GGACACGGTATTTTCAGGTAATTCTTT 60.095 37.037 0.00 0.00 0.00 2.52
43 44 6.373495 GGACACGGTATTTTCAGGTAATTCTT 59.627 38.462 0.00 0.00 0.00 2.52
44 45 5.878669 GGACACGGTATTTTCAGGTAATTCT 59.121 40.000 0.00 0.00 0.00 2.40
45 46 5.644636 TGGACACGGTATTTTCAGGTAATTC 59.355 40.000 0.00 0.00 0.00 2.17
46 47 5.562635 TGGACACGGTATTTTCAGGTAATT 58.437 37.500 0.00 0.00 0.00 1.40
47 48 5.046159 TCTGGACACGGTATTTTCAGGTAAT 60.046 40.000 0.00 0.00 0.00 1.89
48 49 4.283978 TCTGGACACGGTATTTTCAGGTAA 59.716 41.667 0.00 0.00 0.00 2.85
49 50 3.833650 TCTGGACACGGTATTTTCAGGTA 59.166 43.478 0.00 0.00 0.00 3.08
50 51 2.635915 TCTGGACACGGTATTTTCAGGT 59.364 45.455 0.00 0.00 0.00 4.00
51 52 3.328382 TCTGGACACGGTATTTTCAGG 57.672 47.619 0.00 0.00 0.00 3.86
52 53 4.566004 TCTTCTGGACACGGTATTTTCAG 58.434 43.478 0.00 0.00 0.00 3.02
53 54 4.610605 TCTTCTGGACACGGTATTTTCA 57.389 40.909 0.00 0.00 0.00 2.69
54 55 5.875359 AGAATCTTCTGGACACGGTATTTTC 59.125 40.000 0.00 0.00 35.89 2.29
55 56 5.805728 AGAATCTTCTGGACACGGTATTTT 58.194 37.500 0.00 0.00 35.89 1.82
56 57 5.046591 TGAGAATCTTCTGGACACGGTATTT 60.047 40.000 0.00 0.00 37.73 1.40
57 58 4.466370 TGAGAATCTTCTGGACACGGTATT 59.534 41.667 0.00 0.00 37.73 1.89
58 59 4.023980 TGAGAATCTTCTGGACACGGTAT 58.976 43.478 0.00 0.00 37.73 2.73
59 60 3.427573 TGAGAATCTTCTGGACACGGTA 58.572 45.455 0.00 0.00 37.73 4.02
60 61 2.248248 TGAGAATCTTCTGGACACGGT 58.752 47.619 0.00 0.00 37.73 4.83
61 62 3.533606 ATGAGAATCTTCTGGACACGG 57.466 47.619 0.00 0.00 37.73 4.94
62 63 3.549471 CGAATGAGAATCTTCTGGACACG 59.451 47.826 0.00 0.00 37.73 4.49
63 64 3.868077 CCGAATGAGAATCTTCTGGACAC 59.132 47.826 0.00 0.00 37.73 3.67
64 65 3.118629 CCCGAATGAGAATCTTCTGGACA 60.119 47.826 0.00 0.00 37.73 4.02
65 66 3.118592 ACCCGAATGAGAATCTTCTGGAC 60.119 47.826 0.00 0.00 37.73 4.02
66 67 3.107601 ACCCGAATGAGAATCTTCTGGA 58.892 45.455 0.00 0.00 37.73 3.86
67 68 3.550437 ACCCGAATGAGAATCTTCTGG 57.450 47.619 0.00 0.00 37.73 3.86
68 69 8.839310 AATATTACCCGAATGAGAATCTTCTG 57.161 34.615 0.00 0.00 37.73 3.02
69 70 9.495572 GAAATATTACCCGAATGAGAATCTTCT 57.504 33.333 0.00 0.00 41.00 2.85
70 71 9.273016 TGAAATATTACCCGAATGAGAATCTTC 57.727 33.333 0.00 0.00 34.92 2.87
71 72 9.057089 GTGAAATATTACCCGAATGAGAATCTT 57.943 33.333 0.00 0.00 34.92 2.40
72 73 8.432805 AGTGAAATATTACCCGAATGAGAATCT 58.567 33.333 0.00 0.00 34.92 2.40
73 74 8.608844 AGTGAAATATTACCCGAATGAGAATC 57.391 34.615 0.00 0.00 0.00 2.52
74 75 8.210946 TGAGTGAAATATTACCCGAATGAGAAT 58.789 33.333 0.00 0.00 0.00 2.40
75 76 7.561251 TGAGTGAAATATTACCCGAATGAGAA 58.439 34.615 0.00 0.00 0.00 2.87
76 77 7.119709 TGAGTGAAATATTACCCGAATGAGA 57.880 36.000 0.00 0.00 0.00 3.27
77 78 7.786178 TTGAGTGAAATATTACCCGAATGAG 57.214 36.000 0.00 0.00 0.00 2.90
78 79 7.201696 GCTTTGAGTGAAATATTACCCGAATGA 60.202 37.037 0.00 0.00 0.00 2.57
79 80 6.912591 GCTTTGAGTGAAATATTACCCGAATG 59.087 38.462 0.00 0.00 0.00 2.67
80 81 6.601613 TGCTTTGAGTGAAATATTACCCGAAT 59.398 34.615 0.00 0.00 0.00 3.34
81 82 5.941058 TGCTTTGAGTGAAATATTACCCGAA 59.059 36.000 0.00 0.00 0.00 4.30
82 83 5.492895 TGCTTTGAGTGAAATATTACCCGA 58.507 37.500 0.00 0.00 0.00 5.14
83 84 5.584649 TCTGCTTTGAGTGAAATATTACCCG 59.415 40.000 0.00 0.00 0.00 5.28
84 85 7.283127 TCATCTGCTTTGAGTGAAATATTACCC 59.717 37.037 0.00 0.00 0.00 3.69
85 86 8.213518 TCATCTGCTTTGAGTGAAATATTACC 57.786 34.615 0.00 0.00 0.00 2.85
86 87 7.854916 GCTCATCTGCTTTGAGTGAAATATTAC 59.145 37.037 11.13 0.00 42.12 1.89
87 88 7.553760 TGCTCATCTGCTTTGAGTGAAATATTA 59.446 33.333 11.13 0.00 42.12 0.98
88 89 6.376299 TGCTCATCTGCTTTGAGTGAAATATT 59.624 34.615 11.13 0.00 42.12 1.28
89 90 5.884232 TGCTCATCTGCTTTGAGTGAAATAT 59.116 36.000 11.13 0.00 42.12 1.28
90 91 5.247862 TGCTCATCTGCTTTGAGTGAAATA 58.752 37.500 11.13 0.00 42.12 1.40
91 92 4.077108 TGCTCATCTGCTTTGAGTGAAAT 58.923 39.130 11.13 0.00 42.12 2.17
92 93 3.479489 TGCTCATCTGCTTTGAGTGAAA 58.521 40.909 11.13 0.00 42.12 2.69
93 94 3.130280 TGCTCATCTGCTTTGAGTGAA 57.870 42.857 11.13 0.00 42.12 3.18
94 95 2.845363 TGCTCATCTGCTTTGAGTGA 57.155 45.000 11.13 0.00 42.12 3.41
95 96 3.937079 TGTATGCTCATCTGCTTTGAGTG 59.063 43.478 11.13 0.00 42.12 3.51
96 97 4.212143 TGTATGCTCATCTGCTTTGAGT 57.788 40.909 11.13 0.00 42.12 3.41
97 98 5.123502 AGTTTGTATGCTCATCTGCTTTGAG 59.876 40.000 6.72 6.72 42.83 3.02
98 99 5.005740 AGTTTGTATGCTCATCTGCTTTGA 58.994 37.500 0.00 0.00 0.00 2.69
99 100 5.306532 AGTTTGTATGCTCATCTGCTTTG 57.693 39.130 0.00 0.00 0.00 2.77
100 101 6.261826 GGATAGTTTGTATGCTCATCTGCTTT 59.738 38.462 0.00 0.00 0.00 3.51
101 102 5.762218 GGATAGTTTGTATGCTCATCTGCTT 59.238 40.000 0.00 0.00 0.00 3.91
102 103 5.303971 GGATAGTTTGTATGCTCATCTGCT 58.696 41.667 0.00 0.00 0.00 4.24
103 104 4.151335 CGGATAGTTTGTATGCTCATCTGC 59.849 45.833 0.00 0.00 0.00 4.26
104 105 4.687948 CCGGATAGTTTGTATGCTCATCTG 59.312 45.833 0.00 0.00 0.00 2.90
105 106 4.588951 TCCGGATAGTTTGTATGCTCATCT 59.411 41.667 0.00 0.00 0.00 2.90
106 107 4.883083 TCCGGATAGTTTGTATGCTCATC 58.117 43.478 0.00 0.00 0.00 2.92
107 108 4.345257 ACTCCGGATAGTTTGTATGCTCAT 59.655 41.667 3.57 0.00 0.00 2.90
108 109 3.704566 ACTCCGGATAGTTTGTATGCTCA 59.295 43.478 3.57 0.00 0.00 4.26
109 110 4.323553 ACTCCGGATAGTTTGTATGCTC 57.676 45.455 3.57 0.00 0.00 4.26
110 111 4.755266 AACTCCGGATAGTTTGTATGCT 57.245 40.909 3.57 0.00 36.26 3.79
111 112 4.873827 TGAAACTCCGGATAGTTTGTATGC 59.126 41.667 22.46 10.83 46.92 3.14
112 113 6.978343 TTGAAACTCCGGATAGTTTGTATG 57.022 37.500 22.46 2.76 46.92 2.39
113 114 9.675464 TTAATTGAAACTCCGGATAGTTTGTAT 57.325 29.630 22.46 13.71 46.92 2.29
114 115 9.675464 ATTAATTGAAACTCCGGATAGTTTGTA 57.325 29.630 22.46 12.36 46.92 2.41
115 116 7.989416 TTAATTGAAACTCCGGATAGTTTGT 57.011 32.000 22.46 6.27 46.92 2.83
116 117 7.850982 CGATTAATTGAAACTCCGGATAGTTTG 59.149 37.037 22.46 5.62 46.92 2.93
118 119 6.018180 GCGATTAATTGAAACTCCGGATAGTT 60.018 38.462 3.57 3.43 41.46 2.24
119 120 5.465724 GCGATTAATTGAAACTCCGGATAGT 59.534 40.000 3.57 0.00 0.00 2.12
120 121 5.107065 GGCGATTAATTGAAACTCCGGATAG 60.107 44.000 3.57 0.00 0.00 2.08
121 122 4.753107 GGCGATTAATTGAAACTCCGGATA 59.247 41.667 3.57 0.00 0.00 2.59
122 123 3.564225 GGCGATTAATTGAAACTCCGGAT 59.436 43.478 3.57 0.00 0.00 4.18
123 124 2.940410 GGCGATTAATTGAAACTCCGGA 59.060 45.455 2.93 2.93 0.00 5.14
124 125 2.680841 TGGCGATTAATTGAAACTCCGG 59.319 45.455 6.89 0.00 0.00 5.14
125 126 4.342772 CTTGGCGATTAATTGAAACTCCG 58.657 43.478 6.89 0.00 0.00 4.63
126 127 4.105486 GCTTGGCGATTAATTGAAACTCC 58.895 43.478 6.89 0.00 0.00 3.85
127 128 4.105486 GGCTTGGCGATTAATTGAAACTC 58.895 43.478 6.89 0.00 0.00 3.01
128 129 3.763897 AGGCTTGGCGATTAATTGAAACT 59.236 39.130 6.89 0.00 0.00 2.66
129 130 3.859386 CAGGCTTGGCGATTAATTGAAAC 59.141 43.478 6.89 0.00 0.00 2.78
130 131 3.509575 ACAGGCTTGGCGATTAATTGAAA 59.490 39.130 6.89 0.00 0.00 2.69
131 132 3.088532 ACAGGCTTGGCGATTAATTGAA 58.911 40.909 6.89 0.00 0.00 2.69
132 133 2.722094 ACAGGCTTGGCGATTAATTGA 58.278 42.857 6.89 0.00 0.00 2.57
133 134 3.508744 AACAGGCTTGGCGATTAATTG 57.491 42.857 0.00 0.00 0.00 2.32
134 135 4.440112 GCTAAACAGGCTTGGCGATTAATT 60.440 41.667 0.00 0.00 0.00 1.40
135 136 3.066760 GCTAAACAGGCTTGGCGATTAAT 59.933 43.478 0.00 0.00 0.00 1.40
136 137 2.422127 GCTAAACAGGCTTGGCGATTAA 59.578 45.455 0.00 0.00 0.00 1.40
137 138 2.014128 GCTAAACAGGCTTGGCGATTA 58.986 47.619 0.00 0.00 0.00 1.75
138 139 0.811281 GCTAAACAGGCTTGGCGATT 59.189 50.000 0.00 0.00 0.00 3.34
139 140 0.035056 AGCTAAACAGGCTTGGCGAT 60.035 50.000 0.00 0.00 37.81 4.58
140 141 0.611200 TAGCTAAACAGGCTTGGCGA 59.389 50.000 0.00 0.00 40.74 5.54
141 142 1.130561 GTTAGCTAAACAGGCTTGGCG 59.869 52.381 7.99 0.00 40.74 5.69
142 143 2.159382 TGTTAGCTAAACAGGCTTGGC 58.841 47.619 7.99 0.00 43.22 4.52
150 151 7.753309 TTAATCAAGCCTTGTTAGCTAAACA 57.247 32.000 7.99 6.23 46.41 2.83
151 152 9.129209 CTTTTAATCAAGCCTTGTTAGCTAAAC 57.871 33.333 7.99 3.57 40.49 2.01
152 153 7.812669 GCTTTTAATCAAGCCTTGTTAGCTAAA 59.187 33.333 7.99 0.00 43.03 1.85
153 154 7.312899 GCTTTTAATCAAGCCTTGTTAGCTAA 58.687 34.615 0.86 0.86 43.03 3.09
154 155 6.852664 GCTTTTAATCAAGCCTTGTTAGCTA 58.147 36.000 4.04 0.00 43.03 3.32
155 156 5.714047 GCTTTTAATCAAGCCTTGTTAGCT 58.286 37.500 4.04 0.00 43.03 3.32
166 167 5.695851 AGATATGCGGGCTTTTAATCAAG 57.304 39.130 0.00 0.00 0.00 3.02
167 168 6.463995 AAAGATATGCGGGCTTTTAATCAA 57.536 33.333 0.00 0.00 0.00 2.57
168 169 7.575414 TTAAAGATATGCGGGCTTTTAATCA 57.425 32.000 0.00 0.00 34.12 2.57
169 170 7.381408 GGTTTAAAGATATGCGGGCTTTTAATC 59.619 37.037 0.00 0.00 34.12 1.75
170 171 7.207383 GGTTTAAAGATATGCGGGCTTTTAAT 58.793 34.615 0.00 0.00 34.12 1.40
171 172 6.406065 GGGTTTAAAGATATGCGGGCTTTTAA 60.406 38.462 0.00 0.00 34.12 1.52
172 173 5.068067 GGGTTTAAAGATATGCGGGCTTTTA 59.932 40.000 0.00 0.00 34.12 1.52
173 174 4.142026 GGGTTTAAAGATATGCGGGCTTTT 60.142 41.667 0.00 0.00 34.12 2.27
174 175 3.383505 GGGTTTAAAGATATGCGGGCTTT 59.616 43.478 0.00 0.00 36.06 3.51
175 176 2.956333 GGGTTTAAAGATATGCGGGCTT 59.044 45.455 0.00 0.00 0.00 4.35
176 177 2.583143 GGGTTTAAAGATATGCGGGCT 58.417 47.619 0.00 0.00 0.00 5.19
177 178 1.611977 GGGGTTTAAAGATATGCGGGC 59.388 52.381 0.00 0.00 0.00 6.13
178 179 1.877443 CGGGGTTTAAAGATATGCGGG 59.123 52.381 0.00 0.00 0.00 6.13
179 180 2.567985 ACGGGGTTTAAAGATATGCGG 58.432 47.619 0.00 0.00 0.00 5.69
180 181 3.495753 GGTACGGGGTTTAAAGATATGCG 59.504 47.826 0.00 0.00 0.00 4.73
181 182 4.453751 TGGTACGGGGTTTAAAGATATGC 58.546 43.478 0.00 0.00 0.00 3.14
182 183 5.704053 GGATGGTACGGGGTTTAAAGATATG 59.296 44.000 0.00 0.00 0.00 1.78
183 184 5.609708 AGGATGGTACGGGGTTTAAAGATAT 59.390 40.000 0.00 0.00 0.00 1.63
184 185 4.970640 AGGATGGTACGGGGTTTAAAGATA 59.029 41.667 0.00 0.00 0.00 1.98
185 186 3.784202 AGGATGGTACGGGGTTTAAAGAT 59.216 43.478 0.00 0.00 0.00 2.40
186 187 3.183801 AGGATGGTACGGGGTTTAAAGA 58.816 45.455 0.00 0.00 0.00 2.52
187 188 3.639672 AGGATGGTACGGGGTTTAAAG 57.360 47.619 0.00 0.00 0.00 1.85
188 189 4.782156 TCTAAGGATGGTACGGGGTTTAAA 59.218 41.667 0.00 0.00 0.00 1.52
189 190 4.162131 GTCTAAGGATGGTACGGGGTTTAA 59.838 45.833 0.00 0.00 0.00 1.52
190 191 3.706086 GTCTAAGGATGGTACGGGGTTTA 59.294 47.826 0.00 0.00 0.00 2.01
191 192 2.502947 GTCTAAGGATGGTACGGGGTTT 59.497 50.000 0.00 0.00 0.00 3.27
192 193 2.113807 GTCTAAGGATGGTACGGGGTT 58.886 52.381 0.00 0.00 0.00 4.11
193 194 1.290130 AGTCTAAGGATGGTACGGGGT 59.710 52.381 0.00 0.00 0.00 4.95
194 195 2.083628 AGTCTAAGGATGGTACGGGG 57.916 55.000 0.00 0.00 0.00 5.73
195 196 3.431766 CCAAAGTCTAAGGATGGTACGGG 60.432 52.174 0.00 0.00 0.00 5.28
196 197 3.449737 TCCAAAGTCTAAGGATGGTACGG 59.550 47.826 0.00 0.00 32.90 4.02
197 198 4.730949 TCCAAAGTCTAAGGATGGTACG 57.269 45.455 0.00 0.00 32.90 3.67
198 199 6.107343 GTCTTCCAAAGTCTAAGGATGGTAC 58.893 44.000 0.00 0.00 32.90 3.34
199 200 5.105473 CGTCTTCCAAAGTCTAAGGATGGTA 60.105 44.000 0.00 0.00 32.90 3.25
200 201 4.322801 CGTCTTCCAAAGTCTAAGGATGGT 60.323 45.833 0.00 0.00 32.90 3.55
201 202 4.184629 CGTCTTCCAAAGTCTAAGGATGG 58.815 47.826 0.00 0.00 0.00 3.51
202 203 3.619038 GCGTCTTCCAAAGTCTAAGGATG 59.381 47.826 0.00 0.00 0.00 3.51
203 204 3.260884 TGCGTCTTCCAAAGTCTAAGGAT 59.739 43.478 0.00 0.00 0.00 3.24
204 205 2.631062 TGCGTCTTCCAAAGTCTAAGGA 59.369 45.455 0.00 0.00 0.00 3.36
205 206 3.040147 TGCGTCTTCCAAAGTCTAAGG 57.960 47.619 0.00 0.00 0.00 2.69
206 207 5.613358 AAATGCGTCTTCCAAAGTCTAAG 57.387 39.130 0.00 0.00 0.00 2.18
207 208 7.148306 GGATAAAATGCGTCTTCCAAAGTCTAA 60.148 37.037 0.00 0.00 0.00 2.10
208 209 6.315393 GGATAAAATGCGTCTTCCAAAGTCTA 59.685 38.462 0.00 0.00 0.00 2.59
209 210 5.123979 GGATAAAATGCGTCTTCCAAAGTCT 59.876 40.000 0.00 0.00 0.00 3.24
210 211 5.332707 GGATAAAATGCGTCTTCCAAAGTC 58.667 41.667 0.00 0.00 0.00 3.01
211 212 4.157840 GGGATAAAATGCGTCTTCCAAAGT 59.842 41.667 0.00 0.00 0.00 2.66
212 213 4.157656 TGGGATAAAATGCGTCTTCCAAAG 59.842 41.667 0.00 0.00 0.00 2.77
213 214 4.082845 TGGGATAAAATGCGTCTTCCAAA 58.917 39.130 0.00 0.00 0.00 3.28
214 215 3.691575 TGGGATAAAATGCGTCTTCCAA 58.308 40.909 0.00 0.00 0.00 3.53
215 216 3.358111 TGGGATAAAATGCGTCTTCCA 57.642 42.857 0.00 0.00 0.00 3.53
216 217 3.694566 AGTTGGGATAAAATGCGTCTTCC 59.305 43.478 0.00 0.00 0.00 3.46
217 218 4.965119 AGTTGGGATAAAATGCGTCTTC 57.035 40.909 0.00 0.00 0.00 2.87
218 219 5.163652 GCTAAGTTGGGATAAAATGCGTCTT 60.164 40.000 0.00 0.00 0.00 3.01
219 220 4.335594 GCTAAGTTGGGATAAAATGCGTCT 59.664 41.667 0.00 0.00 0.00 4.18
220 221 4.497507 GGCTAAGTTGGGATAAAATGCGTC 60.498 45.833 0.00 0.00 0.00 5.19
221 222 3.380320 GGCTAAGTTGGGATAAAATGCGT 59.620 43.478 0.00 0.00 0.00 5.24
222 223 3.380004 TGGCTAAGTTGGGATAAAATGCG 59.620 43.478 0.00 0.00 0.00 4.73
223 224 5.337578 TTGGCTAAGTTGGGATAAAATGC 57.662 39.130 0.00 0.00 0.00 3.56
224 225 5.127682 AGCTTGGCTAAGTTGGGATAAAATG 59.872 40.000 11.80 0.00 36.99 2.32
225 226 5.272402 AGCTTGGCTAAGTTGGGATAAAAT 58.728 37.500 11.80 0.00 36.99 1.82
226 227 4.672899 AGCTTGGCTAAGTTGGGATAAAA 58.327 39.130 11.80 0.00 36.99 1.52
227 228 4.316025 AGCTTGGCTAAGTTGGGATAAA 57.684 40.909 11.80 0.00 36.99 1.40
228 229 5.646692 ATAGCTTGGCTAAGTTGGGATAA 57.353 39.130 11.80 0.00 44.62 1.75
229 230 5.646692 AATAGCTTGGCTAAGTTGGGATA 57.353 39.130 11.80 0.00 44.62 2.59
230 231 4.526438 AATAGCTTGGCTAAGTTGGGAT 57.474 40.909 11.80 0.00 44.62 3.85
231 232 4.316025 AAATAGCTTGGCTAAGTTGGGA 57.684 40.909 11.80 0.00 44.62 4.37
232 233 5.185828 AGAAAAATAGCTTGGCTAAGTTGGG 59.814 40.000 11.80 0.00 44.62 4.12
233 234 6.151817 AGAGAAAAATAGCTTGGCTAAGTTGG 59.848 38.462 11.80 0.00 44.62 3.77
234 235 7.150783 AGAGAAAAATAGCTTGGCTAAGTTG 57.849 36.000 11.80 0.00 44.62 3.16
235 236 7.767250 AAGAGAAAAATAGCTTGGCTAAGTT 57.233 32.000 11.80 8.09 44.62 2.66
236 237 7.094162 GGAAAGAGAAAAATAGCTTGGCTAAGT 60.094 37.037 11.80 1.29 44.62 2.24
237 238 7.121907 AGGAAAGAGAAAAATAGCTTGGCTAAG 59.878 37.037 5.28 5.28 44.62 2.18
238 239 6.948309 AGGAAAGAGAAAAATAGCTTGGCTAA 59.052 34.615 0.00 0.00 44.62 3.09
239 240 6.485171 AGGAAAGAGAAAAATAGCTTGGCTA 58.515 36.000 0.00 1.64 45.55 3.93
240 241 5.328565 AGGAAAGAGAAAAATAGCTTGGCT 58.671 37.500 0.00 0.00 43.41 4.75
241 242 5.651387 AGGAAAGAGAAAAATAGCTTGGC 57.349 39.130 0.00 0.00 0.00 4.52
242 243 8.893219 AAAAAGGAAAGAGAAAAATAGCTTGG 57.107 30.769 0.00 0.00 0.00 3.61
243 244 9.533253 TGAAAAAGGAAAGAGAAAAATAGCTTG 57.467 29.630 0.00 0.00 0.00 4.01
249 250 9.342308 GGGAATTGAAAAAGGAAAGAGAAAAAT 57.658 29.630 0.00 0.00 0.00 1.82
250 251 7.773224 GGGGAATTGAAAAAGGAAAGAGAAAAA 59.227 33.333 0.00 0.00 0.00 1.94
251 252 7.092668 TGGGGAATTGAAAAAGGAAAGAGAAAA 60.093 33.333 0.00 0.00 0.00 2.29
252 253 6.385467 TGGGGAATTGAAAAAGGAAAGAGAAA 59.615 34.615 0.00 0.00 0.00 2.52
253 254 5.902431 TGGGGAATTGAAAAAGGAAAGAGAA 59.098 36.000 0.00 0.00 0.00 2.87
254 255 5.463154 TGGGGAATTGAAAAAGGAAAGAGA 58.537 37.500 0.00 0.00 0.00 3.10
255 256 5.806654 TGGGGAATTGAAAAAGGAAAGAG 57.193 39.130 0.00 0.00 0.00 2.85
256 257 6.762077 AATGGGGAATTGAAAAAGGAAAGA 57.238 33.333 0.00 0.00 0.00 2.52
258 259 9.952030 GTATTAATGGGGAATTGAAAAAGGAAA 57.048 29.630 0.00 0.00 0.00 3.13
259 260 9.332713 AGTATTAATGGGGAATTGAAAAAGGAA 57.667 29.630 0.00 0.00 0.00 3.36
260 261 8.757877 CAGTATTAATGGGGAATTGAAAAAGGA 58.242 33.333 0.00 0.00 0.00 3.36
261 262 7.495606 GCAGTATTAATGGGGAATTGAAAAAGG 59.504 37.037 0.00 0.00 0.00 3.11
262 263 7.495606 GGCAGTATTAATGGGGAATTGAAAAAG 59.504 37.037 0.00 0.00 0.00 2.27
263 264 7.181845 AGGCAGTATTAATGGGGAATTGAAAAA 59.818 33.333 0.00 0.00 0.00 1.94
264 265 6.671779 AGGCAGTATTAATGGGGAATTGAAAA 59.328 34.615 0.00 0.00 0.00 2.29
265 266 6.201591 AGGCAGTATTAATGGGGAATTGAAA 58.798 36.000 0.00 0.00 0.00 2.69
266 267 5.776358 AGGCAGTATTAATGGGGAATTGAA 58.224 37.500 0.00 0.00 0.00 2.69
267 268 5.103728 TGAGGCAGTATTAATGGGGAATTGA 60.104 40.000 0.00 0.00 0.00 2.57
268 269 5.139727 TGAGGCAGTATTAATGGGGAATTG 58.860 41.667 0.00 0.00 0.00 2.32
269 270 5.402054 TGAGGCAGTATTAATGGGGAATT 57.598 39.130 0.00 0.00 0.00 2.17
270 271 5.074929 TGATGAGGCAGTATTAATGGGGAAT 59.925 40.000 0.00 0.00 0.00 3.01
271 272 4.415179 TGATGAGGCAGTATTAATGGGGAA 59.585 41.667 0.00 0.00 0.00 3.97
272 273 3.980022 TGATGAGGCAGTATTAATGGGGA 59.020 43.478 0.00 0.00 0.00 4.81
273 274 4.371624 TGATGAGGCAGTATTAATGGGG 57.628 45.455 0.00 0.00 0.00 4.96
274 275 5.593909 TGTTTGATGAGGCAGTATTAATGGG 59.406 40.000 0.00 0.00 0.00 4.00
275 276 6.319658 AGTGTTTGATGAGGCAGTATTAATGG 59.680 38.462 0.00 0.00 0.00 3.16
276 277 7.281774 AGAGTGTTTGATGAGGCAGTATTAATG 59.718 37.037 0.00 0.00 0.00 1.90
277 278 7.341805 AGAGTGTTTGATGAGGCAGTATTAAT 58.658 34.615 0.00 0.00 0.00 1.40
278 279 6.711277 AGAGTGTTTGATGAGGCAGTATTAA 58.289 36.000 0.00 0.00 0.00 1.40
279 280 6.299805 AGAGTGTTTGATGAGGCAGTATTA 57.700 37.500 0.00 0.00 0.00 0.98
280 281 5.171339 AGAGTGTTTGATGAGGCAGTATT 57.829 39.130 0.00 0.00 0.00 1.89
281 282 4.833478 AGAGTGTTTGATGAGGCAGTAT 57.167 40.909 0.00 0.00 0.00 2.12
282 283 4.563580 GGAAGAGTGTTTGATGAGGCAGTA 60.564 45.833 0.00 0.00 0.00 2.74
283 284 3.406764 GAAGAGTGTTTGATGAGGCAGT 58.593 45.455 0.00 0.00 0.00 4.40
284 285 2.746362 GGAAGAGTGTTTGATGAGGCAG 59.254 50.000 0.00 0.00 0.00 4.85
285 286 2.106338 TGGAAGAGTGTTTGATGAGGCA 59.894 45.455 0.00 0.00 0.00 4.75
286 287 2.783135 TGGAAGAGTGTTTGATGAGGC 58.217 47.619 0.00 0.00 0.00 4.70
287 288 7.636150 AATAATGGAAGAGTGTTTGATGAGG 57.364 36.000 0.00 0.00 0.00 3.86
288 289 9.918630 AAAAATAATGGAAGAGTGTTTGATGAG 57.081 29.630 0.00 0.00 0.00 2.90
312 313 9.601971 GAGTGCACGATTATAAAACTACAAAAA 57.398 29.630 12.01 0.00 0.00 1.94
313 314 8.231837 GGAGTGCACGATTATAAAACTACAAAA 58.768 33.333 12.01 0.00 0.00 2.44
314 315 7.388224 TGGAGTGCACGATTATAAAACTACAAA 59.612 33.333 12.01 0.00 0.00 2.83
315 316 6.874664 TGGAGTGCACGATTATAAAACTACAA 59.125 34.615 12.01 0.00 0.00 2.41
316 317 6.399743 TGGAGTGCACGATTATAAAACTACA 58.600 36.000 12.01 0.00 0.00 2.74
317 318 6.897259 TGGAGTGCACGATTATAAAACTAC 57.103 37.500 12.01 0.00 0.00 2.73
318 319 8.500753 AAATGGAGTGCACGATTATAAAACTA 57.499 30.769 12.01 0.00 0.00 2.24
319 320 7.120579 TGAAATGGAGTGCACGATTATAAAACT 59.879 33.333 12.01 0.00 0.00 2.66
320 321 7.247728 TGAAATGGAGTGCACGATTATAAAAC 58.752 34.615 12.01 0.00 0.00 2.43
321 322 7.384439 TGAAATGGAGTGCACGATTATAAAA 57.616 32.000 12.01 0.00 0.00 1.52
322 323 6.993786 TGAAATGGAGTGCACGATTATAAA 57.006 33.333 12.01 0.00 0.00 1.40
323 324 8.669946 TTATGAAATGGAGTGCACGATTATAA 57.330 30.769 12.01 9.78 0.00 0.98
324 325 8.846943 ATTATGAAATGGAGTGCACGATTATA 57.153 30.769 12.01 4.83 0.00 0.98
325 326 7.750229 ATTATGAAATGGAGTGCACGATTAT 57.250 32.000 12.01 2.17 0.00 1.28
326 327 7.498900 AGAATTATGAAATGGAGTGCACGATTA 59.501 33.333 12.01 0.00 0.00 1.75
327 328 6.319658 AGAATTATGAAATGGAGTGCACGATT 59.680 34.615 12.01 8.48 0.00 3.34
328 329 5.824624 AGAATTATGAAATGGAGTGCACGAT 59.175 36.000 12.01 2.04 0.00 3.73
329 330 5.185454 AGAATTATGAAATGGAGTGCACGA 58.815 37.500 12.01 0.00 0.00 4.35
330 331 5.490139 AGAATTATGAAATGGAGTGCACG 57.510 39.130 12.01 0.00 0.00 5.34
331 332 9.807649 AAAATAGAATTATGAAATGGAGTGCAC 57.192 29.630 9.40 9.40 0.00 4.57
332 333 9.806203 CAAAATAGAATTATGAAATGGAGTGCA 57.194 29.630 0.00 0.00 0.00 4.57
354 355 7.969536 TTCTTGTTGTGATTTTGGTTCAAAA 57.030 28.000 8.04 8.04 45.41 2.44
355 356 8.558973 AATTCTTGTTGTGATTTTGGTTCAAA 57.441 26.923 0.00 0.00 0.00 2.69
356 357 9.829507 ATAATTCTTGTTGTGATTTTGGTTCAA 57.170 25.926 0.00 0.00 0.00 2.69
357 358 9.258826 CATAATTCTTGTTGTGATTTTGGTTCA 57.741 29.630 0.00 0.00 0.00 3.18
358 359 8.711457 CCATAATTCTTGTTGTGATTTTGGTTC 58.289 33.333 0.00 0.00 0.00 3.62
359 360 8.428063 TCCATAATTCTTGTTGTGATTTTGGTT 58.572 29.630 0.00 0.00 0.00 3.67
360 361 7.961351 TCCATAATTCTTGTTGTGATTTTGGT 58.039 30.769 0.00 0.00 0.00 3.67
361 362 7.063780 GCTCCATAATTCTTGTTGTGATTTTGG 59.936 37.037 0.00 0.00 0.00 3.28
362 363 7.063780 GGCTCCATAATTCTTGTTGTGATTTTG 59.936 37.037 0.00 0.00 0.00 2.44
363 364 7.099120 GGCTCCATAATTCTTGTTGTGATTTT 58.901 34.615 0.00 0.00 0.00 1.82
364 365 6.211184 TGGCTCCATAATTCTTGTTGTGATTT 59.789 34.615 0.00 0.00 0.00 2.17
365 366 5.716228 TGGCTCCATAATTCTTGTTGTGATT 59.284 36.000 0.00 0.00 0.00 2.57
366 367 5.263599 TGGCTCCATAATTCTTGTTGTGAT 58.736 37.500 0.00 0.00 0.00 3.06
367 368 4.661222 TGGCTCCATAATTCTTGTTGTGA 58.339 39.130 0.00 0.00 0.00 3.58
368 369 5.389859 TTGGCTCCATAATTCTTGTTGTG 57.610 39.130 0.00 0.00 0.00 3.33
369 370 5.304101 TGTTTGGCTCCATAATTCTTGTTGT 59.696 36.000 0.00 0.00 0.00 3.32
370 371 5.782047 TGTTTGGCTCCATAATTCTTGTTG 58.218 37.500 0.00 0.00 0.00 3.33
371 372 6.418057 TTGTTTGGCTCCATAATTCTTGTT 57.582 33.333 0.00 0.00 0.00 2.83
372 373 6.418057 TTTGTTTGGCTCCATAATTCTTGT 57.582 33.333 0.00 0.00 0.00 3.16
373 374 7.745015 CAATTTGTTTGGCTCCATAATTCTTG 58.255 34.615 0.00 0.00 0.00 3.02
374 375 7.910441 CAATTTGTTTGGCTCCATAATTCTT 57.090 32.000 0.00 0.00 0.00 2.52
388 389 8.918658 CATGTTCTCTTGTATCCAATTTGTTTG 58.081 33.333 0.00 0.00 34.93 2.93
389 390 8.859090 TCATGTTCTCTTGTATCCAATTTGTTT 58.141 29.630 0.00 0.00 0.00 2.83
390 391 8.299570 GTCATGTTCTCTTGTATCCAATTTGTT 58.700 33.333 0.00 0.00 0.00 2.83
391 392 7.448161 TGTCATGTTCTCTTGTATCCAATTTGT 59.552 33.333 0.00 0.00 0.00 2.83
392 393 7.752239 GTGTCATGTTCTCTTGTATCCAATTTG 59.248 37.037 0.00 0.00 0.00 2.32
393 394 7.667219 AGTGTCATGTTCTCTTGTATCCAATTT 59.333 33.333 0.00 0.00 0.00 1.82
394 395 7.170965 AGTGTCATGTTCTCTTGTATCCAATT 58.829 34.615 0.00 0.00 0.00 2.32
395 396 6.715280 AGTGTCATGTTCTCTTGTATCCAAT 58.285 36.000 0.00 0.00 0.00 3.16
396 397 6.014242 AGAGTGTCATGTTCTCTTGTATCCAA 60.014 38.462 9.81 0.00 35.37 3.53
397 398 5.481824 AGAGTGTCATGTTCTCTTGTATCCA 59.518 40.000 9.81 0.00 35.37 3.41
398 399 5.971763 AGAGTGTCATGTTCTCTTGTATCC 58.028 41.667 9.81 0.00 35.37 2.59
399 400 9.593134 AAATAGAGTGTCATGTTCTCTTGTATC 57.407 33.333 16.91 0.00 39.03 2.24
400 401 9.950496 AAAATAGAGTGTCATGTTCTCTTGTAT 57.050 29.630 16.91 7.14 39.03 2.29
401 402 9.778741 AAAAATAGAGTGTCATGTTCTCTTGTA 57.221 29.630 16.91 5.66 39.03 2.41
402 403 8.682936 AAAAATAGAGTGTCATGTTCTCTTGT 57.317 30.769 16.91 8.31 39.03 3.16
404 405 8.926710 CGTAAAAATAGAGTGTCATGTTCTCTT 58.073 33.333 16.91 6.64 39.03 2.85
405 406 8.088981 ACGTAAAAATAGAGTGTCATGTTCTCT 58.911 33.333 16.30 16.30 40.85 3.10
406 407 8.162880 CACGTAAAAATAGAGTGTCATGTTCTC 58.837 37.037 0.00 0.00 0.00 2.87
407 408 7.656137 ACACGTAAAAATAGAGTGTCATGTTCT 59.344 33.333 0.00 0.00 41.55 3.01
408 409 7.793902 ACACGTAAAAATAGAGTGTCATGTTC 58.206 34.615 0.00 0.00 41.55 3.18
409 410 7.724305 ACACGTAAAAATAGAGTGTCATGTT 57.276 32.000 0.00 0.00 41.55 2.71
410 411 7.724305 AACACGTAAAAATAGAGTGTCATGT 57.276 32.000 0.00 0.00 44.13 3.21
411 412 9.103048 GAAAACACGTAAAAATAGAGTGTCATG 57.897 33.333 0.00 0.00 44.13 3.07
412 413 8.832521 TGAAAACACGTAAAAATAGAGTGTCAT 58.167 29.630 0.00 0.00 44.13 3.06
413 414 8.199176 TGAAAACACGTAAAAATAGAGTGTCA 57.801 30.769 0.00 0.00 44.13 3.58
414 415 9.659830 AATGAAAACACGTAAAAATAGAGTGTC 57.340 29.630 0.00 0.00 44.13 3.67
415 416 9.659830 GAATGAAAACACGTAAAAATAGAGTGT 57.340 29.630 0.00 0.00 46.46 3.55
416 417 9.113876 GGAATGAAAACACGTAAAAATAGAGTG 57.886 33.333 0.00 0.00 38.63 3.51
417 418 9.063615 AGGAATGAAAACACGTAAAAATAGAGT 57.936 29.630 0.00 0.00 0.00 3.24
418 419 9.893305 AAGGAATGAAAACACGTAAAAATAGAG 57.107 29.630 0.00 0.00 0.00 2.43
419 420 9.887406 GAAGGAATGAAAACACGTAAAAATAGA 57.113 29.630 0.00 0.00 0.00 1.98
420 421 9.672086 TGAAGGAATGAAAACACGTAAAAATAG 57.328 29.630 0.00 0.00 0.00 1.73
422 423 9.541143 AATGAAGGAATGAAAACACGTAAAAAT 57.459 25.926 0.00 0.00 0.00 1.82
423 424 8.934507 AATGAAGGAATGAAAACACGTAAAAA 57.065 26.923 0.00 0.00 0.00 1.94
424 425 8.934507 AAATGAAGGAATGAAAACACGTAAAA 57.065 26.923 0.00 0.00 0.00 1.52
425 426 8.812329 CAAAATGAAGGAATGAAAACACGTAAA 58.188 29.630 0.00 0.00 0.00 2.01
426 427 8.191446 TCAAAATGAAGGAATGAAAACACGTAA 58.809 29.630 0.00 0.00 0.00 3.18
427 428 7.708051 TCAAAATGAAGGAATGAAAACACGTA 58.292 30.769 0.00 0.00 0.00 3.57
428 429 6.568869 TCAAAATGAAGGAATGAAAACACGT 58.431 32.000 0.00 0.00 0.00 4.49
429 430 6.917477 TCTCAAAATGAAGGAATGAAAACACG 59.083 34.615 0.00 0.00 0.00 4.49
430 431 8.647143 TTCTCAAAATGAAGGAATGAAAACAC 57.353 30.769 0.00 0.00 0.00 3.32
431 432 9.835389 AATTCTCAAAATGAAGGAATGAAAACA 57.165 25.926 0.00 0.00 0.00 2.83
444 445 9.701098 CCTCTTTGAATTGAATTCTCAAAATGA 57.299 29.630 17.76 12.74 44.64 2.57
445 446 9.485206 ACCTCTTTGAATTGAATTCTCAAAATG 57.515 29.630 17.76 13.47 44.64 2.32
446 447 9.702494 GACCTCTTTGAATTGAATTCTCAAAAT 57.298 29.630 17.76 3.65 44.64 1.82
447 448 8.143835 GGACCTCTTTGAATTGAATTCTCAAAA 58.856 33.333 17.76 9.76 44.64 2.44
448 449 7.506938 AGGACCTCTTTGAATTGAATTCTCAAA 59.493 33.333 17.76 16.21 44.64 2.69
449 450 7.006509 AGGACCTCTTTGAATTGAATTCTCAA 58.993 34.615 17.76 10.19 45.53 3.02
450 451 6.546484 AGGACCTCTTTGAATTGAATTCTCA 58.454 36.000 17.76 3.30 39.96 3.27
451 452 8.567285 TTAGGACCTCTTTGAATTGAATTCTC 57.433 34.615 17.76 6.10 39.96 2.87
452 453 8.940397 TTTAGGACCTCTTTGAATTGAATTCT 57.060 30.769 17.76 0.00 39.96 2.40
454 455 9.933723 CATTTTAGGACCTCTTTGAATTGAATT 57.066 29.630 0.00 0.00 0.00 2.17
455 456 9.093458 ACATTTTAGGACCTCTTTGAATTGAAT 57.907 29.630 0.00 0.00 0.00 2.57
456 457 8.477419 ACATTTTAGGACCTCTTTGAATTGAA 57.523 30.769 0.00 0.00 0.00 2.69
457 458 8.477419 AACATTTTAGGACCTCTTTGAATTGA 57.523 30.769 0.00 0.00 0.00 2.57
458 459 9.196552 GAAACATTTTAGGACCTCTTTGAATTG 57.803 33.333 0.00 0.00 0.00 2.32
459 460 9.147732 AGAAACATTTTAGGACCTCTTTGAATT 57.852 29.630 0.00 0.00 0.00 2.17
460 461 8.712228 AGAAACATTTTAGGACCTCTTTGAAT 57.288 30.769 0.00 0.00 0.00 2.57
461 462 7.041372 CGAGAAACATTTTAGGACCTCTTTGAA 60.041 37.037 0.00 0.00 0.00 2.69
462 463 6.426937 CGAGAAACATTTTAGGACCTCTTTGA 59.573 38.462 0.00 0.00 0.00 2.69
463 464 6.426937 TCGAGAAACATTTTAGGACCTCTTTG 59.573 38.462 0.00 0.00 0.00 2.77
464 465 6.531021 TCGAGAAACATTTTAGGACCTCTTT 58.469 36.000 0.00 0.00 0.00 2.52
465 466 6.110411 TCGAGAAACATTTTAGGACCTCTT 57.890 37.500 0.00 0.00 0.00 2.85
466 467 5.740290 TCGAGAAACATTTTAGGACCTCT 57.260 39.130 0.00 0.00 0.00 3.69
467 468 5.932883 ACTTCGAGAAACATTTTAGGACCTC 59.067 40.000 0.00 0.00 0.00 3.85
468 469 5.866207 ACTTCGAGAAACATTTTAGGACCT 58.134 37.500 0.00 0.00 0.00 3.85
469 470 5.121925 GGACTTCGAGAAACATTTTAGGACC 59.878 44.000 0.00 0.00 0.00 4.46
470 471 5.699458 TGGACTTCGAGAAACATTTTAGGAC 59.301 40.000 0.00 0.00 0.00 3.85
471 472 5.860611 TGGACTTCGAGAAACATTTTAGGA 58.139 37.500 0.00 0.00 0.00 2.94
472 473 5.932303 TCTGGACTTCGAGAAACATTTTAGG 59.068 40.000 0.00 0.00 0.00 2.69
473 474 6.647067 AGTCTGGACTTCGAGAAACATTTTAG 59.353 38.462 0.00 0.00 38.83 1.85
474 475 6.522054 AGTCTGGACTTCGAGAAACATTTTA 58.478 36.000 0.00 0.00 38.83 1.52
475 476 5.368989 AGTCTGGACTTCGAGAAACATTTT 58.631 37.500 0.00 0.00 38.83 1.82
476 477 4.962155 AGTCTGGACTTCGAGAAACATTT 58.038 39.130 0.00 0.00 38.83 2.32
477 478 4.282195 AGAGTCTGGACTTCGAGAAACATT 59.718 41.667 4.67 0.00 42.66 2.71
478 479 3.829601 AGAGTCTGGACTTCGAGAAACAT 59.170 43.478 4.67 0.00 42.66 2.71
479 480 3.223435 AGAGTCTGGACTTCGAGAAACA 58.777 45.455 4.67 0.00 42.66 2.83
480 481 3.926821 AGAGTCTGGACTTCGAGAAAC 57.073 47.619 4.67 0.00 42.66 2.78
481 482 4.585162 AGAAAGAGTCTGGACTTCGAGAAA 59.415 41.667 4.67 0.00 42.66 2.52
482 483 4.145807 AGAAAGAGTCTGGACTTCGAGAA 58.854 43.478 4.67 0.00 42.66 2.87
483 484 3.757270 AGAAAGAGTCTGGACTTCGAGA 58.243 45.455 4.67 0.00 42.66 4.04
484 485 4.481463 GAAGAAAGAGTCTGGACTTCGAG 58.519 47.826 14.16 0.00 42.66 4.04
485 486 3.256136 GGAAGAAAGAGTCTGGACTTCGA 59.744 47.826 18.90 0.00 42.66 3.71
486 487 3.580731 GGAAGAAAGAGTCTGGACTTCG 58.419 50.000 18.90 0.00 42.66 3.79
487 488 3.580731 CGGAAGAAAGAGTCTGGACTTC 58.419 50.000 18.07 18.07 42.66 3.01
488 489 2.300437 CCGGAAGAAAGAGTCTGGACTT 59.700 50.000 0.00 0.00 42.12 3.01
489 490 1.896465 CCGGAAGAAAGAGTCTGGACT 59.104 52.381 0.00 2.62 42.12 3.85
490 491 1.066787 CCCGGAAGAAAGAGTCTGGAC 60.067 57.143 0.73 0.00 42.12 4.02
491 492 1.267121 CCCGGAAGAAAGAGTCTGGA 58.733 55.000 0.73 0.00 42.12 3.86
492 493 0.391793 GCCCGGAAGAAAGAGTCTGG 60.392 60.000 0.73 0.00 39.64 3.86
493 494 0.737715 CGCCCGGAAGAAAGAGTCTG 60.738 60.000 0.73 0.00 36.40 3.51
494 495 1.592223 CGCCCGGAAGAAAGAGTCT 59.408 57.895 0.73 0.00 38.69 3.24
670 685 3.151022 CTGGTCTCCCTCCTCGCC 61.151 72.222 0.00 0.00 0.00 5.54
845 871 0.325390 CTTCCGGGAGAGGGGTTAGT 60.325 60.000 2.45 0.00 0.00 2.24
945 971 3.036959 GGGAGGGAGAGGAGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
951 977 2.364317 TTCTGCGGGAGGGAGAGG 60.364 66.667 0.00 0.00 44.48 3.69
952 978 2.726351 GGTTCTGCGGGAGGGAGAG 61.726 68.421 0.00 0.00 44.48 3.20
953 979 2.683933 GGTTCTGCGGGAGGGAGA 60.684 66.667 0.00 0.00 41.87 3.71
954 980 2.873557 TAGGGTTCTGCGGGAGGGAG 62.874 65.000 0.00 0.00 34.99 4.30
955 981 2.873557 CTAGGGTTCTGCGGGAGGGA 62.874 65.000 0.00 0.00 0.00 4.20
956 982 2.365105 TAGGGTTCTGCGGGAGGG 60.365 66.667 0.00 0.00 0.00 4.30
957 983 3.095347 GCTAGGGTTCTGCGGGAGG 62.095 68.421 0.00 0.00 0.00 4.30
958 984 2.022240 GAGCTAGGGTTCTGCGGGAG 62.022 65.000 0.00 0.00 0.00 4.30
959 985 2.038975 AGCTAGGGTTCTGCGGGA 59.961 61.111 0.00 0.00 0.00 5.14
960 986 2.359169 TGAGCTAGGGTTCTGCGGG 61.359 63.158 0.00 0.00 0.00 6.13
977 1003 1.284982 CGACGAAGAGGCTTGTGGTG 61.285 60.000 0.00 0.00 0.00 4.17
978 1004 1.006102 CGACGAAGAGGCTTGTGGT 60.006 57.895 0.00 0.00 0.00 4.16
1383 1612 3.561213 CAGCCATGAGAGCACGCG 61.561 66.667 3.53 3.53 0.00 6.01
1597 1831 2.809601 CAAGTTCCGCGGAGGTCG 60.810 66.667 29.20 14.75 41.99 4.79
1680 1926 1.682684 CTCGGTACTGTCCCCAGCT 60.683 63.158 0.64 0.00 42.81 4.24
2042 2288 3.872511 TGTACGGTTGGTATGTCGAAT 57.127 42.857 0.00 0.00 32.74 3.34
2046 2292 4.268405 CGGTTATTGTACGGTTGGTATGTC 59.732 45.833 0.00 0.00 32.74 3.06
2328 2574 7.192852 AGAGTCTTGGTCATTCATGTAATCT 57.807 36.000 0.00 0.00 0.00 2.40
2557 2803 4.763073 ACTGGCCCTAAGTTATAAACGAC 58.237 43.478 0.00 0.00 36.23 4.34
2594 2840 1.676529 GGAGGAGGCGGCTTATTTTTC 59.323 52.381 14.76 4.98 0.00 2.29
2626 2872 7.040823 CCCAATGAATAAGAGAGTTGGCTTATC 60.041 40.741 0.00 0.00 36.56 1.75
2849 3097 9.739276 CAGCTCCCTACATAATTTGGATTATTA 57.261 33.333 0.00 0.00 36.53 0.98
2901 3149 8.856153 TCAAATTGAATAACTAACCAGCACTA 57.144 30.769 0.00 0.00 0.00 2.74
3002 3250 9.910267 TGGATTGAGAATTTTTCATGAGATAGA 57.090 29.630 0.00 0.00 0.00 1.98
3142 3390 4.096532 CGCATCTTTGAGGAGTAGAGTGTA 59.903 45.833 0.00 0.00 0.00 2.90
3184 3432 2.554032 AGGTGAGCACTTAACAATGCAC 59.446 45.455 0.00 0.00 44.59 4.57
3287 3535 4.592942 TCATTAGCCATTCTGAGCAAGTT 58.407 39.130 0.00 0.00 0.00 2.66
3325 3573 4.708177 ACATCAATATTCTTGCTAGCCGT 58.292 39.130 13.29 0.00 0.00 5.68
3341 3589 6.932400 AGTTATTAAGACACCACGAACATCAA 59.068 34.615 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.