Multiple sequence alignment - TraesCS2A01G266100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G266100 chr2A 100.000 2498 0 0 1 2498 423175463 423177960 0.000000e+00 4614.0
1 TraesCS2A01G266100 chr2A 85.018 554 77 4 957 1504 422784835 422784282 2.170000e-155 558.0
2 TraesCS2A01G266100 chr2A 95.111 225 10 1 1656 1879 239895425 239895201 1.100000e-93 353.0
3 TraesCS2A01G266100 chr2A 94.714 227 10 2 1657 1882 226553717 226553942 3.950000e-93 351.0
4 TraesCS2A01G266100 chr2A 88.889 126 8 1 2142 2267 77792508 77792627 1.550000e-32 150.0
5 TraesCS2A01G266100 chr2D 91.152 825 29 10 845 1656 313714875 313714082 0.000000e+00 1079.0
6 TraesCS2A01G266100 chr2D 84.875 562 79 4 956 1511 313811584 313811023 1.680000e-156 562.0
7 TraesCS2A01G266100 chr2D 85.897 390 38 9 1881 2267 313714088 313713713 1.390000e-107 399.0
8 TraesCS2A01G266100 chr2D 92.424 66 5 0 732 797 313715111 313715046 7.360000e-16 95.3
9 TraesCS2A01G266100 chr2B 93.686 681 27 6 845 1517 381317233 381316561 0.000000e+00 1005.0
10 TraesCS2A01G266100 chr2B 84.220 583 85 5 936 1512 381520359 381519778 6.030000e-156 560.0
11 TraesCS2A01G266100 chr2B 98.283 233 4 0 2266 2498 176251983 176251751 2.310000e-110 409.0
12 TraesCS2A01G266100 chr2B 98.283 233 4 0 2266 2498 181755293 181755061 2.310000e-110 409.0
13 TraesCS2A01G266100 chr2B 92.275 233 13 2 1915 2146 381316428 381316200 2.400000e-85 326.0
14 TraesCS2A01G266100 chr2B 88.095 84 10 0 714 797 381317480 381317397 1.580000e-17 100.0
15 TraesCS2A01G266100 chr2B 94.545 55 3 0 1601 1655 381316498 381316444 4.430000e-13 86.1
16 TraesCS2A01G266100 chr3B 86.691 541 69 3 154 694 448842271 448841734 4.600000e-167 597.0
17 TraesCS2A01G266100 chr3B 95.536 224 8 2 1657 1880 614193898 614194119 8.500000e-95 357.0
18 TraesCS2A01G266100 chr3B 90.411 146 12 1 1 146 448842449 448842306 9.120000e-45 191.0
19 TraesCS2A01G266100 chr1A 82.879 660 86 14 867 1514 586606127 586605483 3.610000e-158 568.0
20 TraesCS2A01G266100 chr1A 84.982 566 74 7 956 1514 586599072 586598511 4.660000e-157 564.0
21 TraesCS2A01G266100 chr1A 97.297 222 6 0 1657 1878 530169969 530170190 6.520000e-101 377.0
22 TraesCS2A01G266100 chr1A 75.694 720 140 21 1 690 457964158 457964872 6.660000e-86 327.0
23 TraesCS2A01G266100 chr1D 81.627 664 90 11 864 1512 487883639 487884285 2.850000e-144 521.0
24 TraesCS2A01G266100 chr1D 82.704 318 49 5 1177 1491 487858982 487858668 6.800000e-71 278.0
25 TraesCS2A01G266100 chrUn 98.712 233 3 0 2266 2498 59805325 59805093 4.970000e-112 414.0
26 TraesCS2A01G266100 chrUn 97.468 237 6 0 2262 2498 119206049 119206285 2.990000e-109 405.0
27 TraesCS2A01G266100 chrUn 85.034 147 20 2 1 146 101250701 101250556 5.570000e-32 148.0
28 TraesCS2A01G266100 chr5B 97.890 237 5 0 2262 2498 646870086 646869850 6.430000e-111 411.0
29 TraesCS2A01G266100 chr5B 98.283 233 4 0 2266 2498 28603586 28603818 2.310000e-110 409.0
30 TraesCS2A01G266100 chr5B 97.309 223 6 0 1657 1879 440262954 440262732 1.810000e-101 379.0
31 TraesCS2A01G266100 chr5B 93.724 239 13 2 1654 1891 537904127 537903890 8.500000e-95 357.0
32 TraesCS2A01G266100 chr5B 75.261 287 51 14 1084 1364 584292153 584292425 4.360000e-23 119.0
33 TraesCS2A01G266100 chr4B 98.283 233 4 0 2266 2498 21235129 21235361 2.310000e-110 409.0
34 TraesCS2A01G266100 chr4B 91.409 291 20 5 2211 2498 184241855 184242143 6.480000e-106 394.0
35 TraesCS2A01G266100 chr4B 95.964 223 8 1 1656 1878 373995925 373995704 6.570000e-96 361.0
36 TraesCS2A01G266100 chr1B 87.606 355 31 10 2146 2498 622845085 622844742 1.390000e-107 399.0
37 TraesCS2A01G266100 chr1B 84.874 238 35 1 1277 1514 679667795 679667559 3.210000e-59 239.0
38 TraesCS2A01G266100 chr7B 95.595 227 8 2 1656 1882 529726122 529726346 1.830000e-96 363.0
39 TraesCS2A01G266100 chr7B 85.616 146 21 0 1 146 646075296 646075151 1.200000e-33 154.0
40 TraesCS2A01G266100 chr5A 93.991 233 13 1 1655 1887 24176072 24175841 3.950000e-93 351.0
41 TraesCS2A01G266100 chr5A 86.822 129 9 6 2140 2267 702816101 702815980 1.200000e-28 137.0
42 TraesCS2A01G266100 chr5A 83.465 127 15 2 2141 2267 593741886 593741766 2.030000e-21 113.0
43 TraesCS2A01G266100 chr5A 88.095 84 10 0 2141 2224 60098392 60098475 1.580000e-17 100.0
44 TraesCS2A01G266100 chr7D 84.138 145 23 0 1 145 118602249 118602393 9.320000e-30 141.0
45 TraesCS2A01G266100 chr3A 85.827 127 12 1 2141 2267 724747887 724748007 2.020000e-26 130.0
46 TraesCS2A01G266100 chr5D 85.586 111 16 0 1094 1204 476785210 476785320 1.570000e-22 117.0
47 TraesCS2A01G266100 chr5D 83.594 128 13 4 2141 2267 332031522 332031402 2.030000e-21 113.0
48 TraesCS2A01G266100 chr7A 82.400 125 10 3 2141 2265 57711395 57711507 5.690000e-17 99.0
49 TraesCS2A01G266100 chr6B 80.800 125 17 6 2143 2267 451471691 451471574 9.510000e-15 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G266100 chr2A 423175463 423177960 2497 False 4614.000000 4614 100.000000 1 2498 1 chr2A.!!$F3 2497
1 TraesCS2A01G266100 chr2A 422784282 422784835 553 True 558.000000 558 85.018000 957 1504 1 chr2A.!!$R2 547
2 TraesCS2A01G266100 chr2D 313811023 313811584 561 True 562.000000 562 84.875000 956 1511 1 chr2D.!!$R1 555
3 TraesCS2A01G266100 chr2D 313713713 313715111 1398 True 524.433333 1079 89.824333 732 2267 3 chr2D.!!$R2 1535
4 TraesCS2A01G266100 chr2B 381519778 381520359 581 True 560.000000 560 84.220000 936 1512 1 chr2B.!!$R3 576
5 TraesCS2A01G266100 chr2B 381316200 381317480 1280 True 379.275000 1005 92.150250 714 2146 4 chr2B.!!$R4 1432
6 TraesCS2A01G266100 chr3B 448841734 448842449 715 True 394.000000 597 88.551000 1 694 2 chr3B.!!$R1 693
7 TraesCS2A01G266100 chr1A 586605483 586606127 644 True 568.000000 568 82.879000 867 1514 1 chr1A.!!$R2 647
8 TraesCS2A01G266100 chr1A 586598511 586599072 561 True 564.000000 564 84.982000 956 1514 1 chr1A.!!$R1 558
9 TraesCS2A01G266100 chr1A 457964158 457964872 714 False 327.000000 327 75.694000 1 690 1 chr1A.!!$F1 689
10 TraesCS2A01G266100 chr1D 487883639 487884285 646 False 521.000000 521 81.627000 864 1512 1 chr1D.!!$F1 648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 737 0.036577 AGCACCTGATCACTGTGAGC 60.037 55.0 18.49 18.49 32.56 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1685 2077 0.105039 GGGTCTCACCTGCTAATCCG 59.895 60.0 0.0 0.0 38.64 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.819595 ACATGTGACATCCCGCGC 60.820 61.111 0.00 0.00 0.00 6.86
72 73 1.209504 CCCGGAATGCTAGGAGTTCAA 59.790 52.381 0.73 0.00 0.00 2.69
73 74 2.158755 CCCGGAATGCTAGGAGTTCAAT 60.159 50.000 0.73 0.00 0.00 2.57
85 86 6.603599 GCTAGGAGTTCAATAATGAAAGGGTT 59.396 38.462 0.00 0.00 46.66 4.11
91 92 6.371825 AGTTCAATAATGAAAGGGTTCGAGAC 59.628 38.462 0.00 0.00 46.66 3.36
125 126 2.649129 GCACCAGGCCCCAATGAAC 61.649 63.158 0.00 0.00 36.11 3.18
132 135 1.494721 AGGCCCCAATGAACGATATGT 59.505 47.619 0.00 0.00 0.00 2.29
133 136 1.608590 GGCCCCAATGAACGATATGTG 59.391 52.381 0.00 0.00 0.00 3.21
171 201 5.182380 GGAAAAACCGAACCATCAGTATTGA 59.818 40.000 0.00 0.00 37.81 2.57
192 222 2.203862 TGATCCACCCCCACGTCA 60.204 61.111 0.00 0.00 0.00 4.35
222 252 2.955881 GCCTTGCCCCGTCTGTACT 61.956 63.158 0.00 0.00 0.00 2.73
230 260 1.541310 CCCGTCTGTACTCTTGGCCA 61.541 60.000 0.00 0.00 0.00 5.36
250 280 5.217978 CCAACGGGCAGGTATATTAAGTA 57.782 43.478 0.00 0.00 0.00 2.24
253 283 6.460781 CAACGGGCAGGTATATTAAGTATGA 58.539 40.000 0.00 0.00 0.00 2.15
273 303 3.826157 TGAACAAGGTTTCATGGATCCAC 59.174 43.478 18.99 3.29 30.29 4.02
276 306 5.255397 ACAAGGTTTCATGGATCCACTTA 57.745 39.130 18.99 2.02 0.00 2.24
279 309 4.273318 AGGTTTCATGGATCCACTTAAGC 58.727 43.478 18.99 18.85 0.00 3.09
282 312 0.947244 CATGGATCCACTTAAGCGCC 59.053 55.000 18.99 0.00 0.00 6.53
289 319 0.391130 CCACTTAAGCGCCTGCACTA 60.391 55.000 2.29 0.00 46.23 2.74
339 369 5.163099 CCATTTATTCCTGGAGGTCCATACA 60.163 44.000 0.00 0.00 46.46 2.29
340 370 6.364701 CATTTATTCCTGGAGGTCCATACAA 58.635 40.000 0.00 0.00 46.46 2.41
342 372 1.191535 TCCTGGAGGTCCATACAACG 58.808 55.000 0.00 0.00 46.46 4.10
357 387 1.394572 ACAACGTGCATGATCGTGATG 59.605 47.619 19.30 11.08 40.19 3.07
360 390 1.862827 ACGTGCATGATCGTGATGATG 59.137 47.619 19.30 8.96 37.47 3.07
366 396 3.487879 GCATGATCGTGATGATGTTGCAA 60.488 43.478 19.30 0.00 39.58 4.08
368 398 3.072944 TGATCGTGATGATGTTGCAACA 58.927 40.909 32.78 32.78 44.06 3.33
378 408 6.259387 TGATGATGTTGCAACAGAGTATCATC 59.741 38.462 37.49 37.49 43.68 2.92
382 412 5.550290 TGTTGCAACAGAGTATCATCAGAA 58.450 37.500 27.96 0.00 37.82 3.02
388 418 7.823799 TGCAACAGAGTATCATCAGAAAACATA 59.176 33.333 0.00 0.00 37.82 2.29
398 428 6.282930 TCATCAGAAAACATATCATCGAGCA 58.717 36.000 0.00 0.00 0.00 4.26
400 430 5.664457 TCAGAAAACATATCATCGAGCACT 58.336 37.500 0.00 0.00 0.00 4.40
402 432 6.697455 TCAGAAAACATATCATCGAGCACTAC 59.303 38.462 0.00 0.00 0.00 2.73
406 436 5.065704 ACATATCATCGAGCACTACATCC 57.934 43.478 0.00 0.00 0.00 3.51
422 452 0.916086 ATCCCGTGCCCATGTTAAGA 59.084 50.000 0.00 0.00 0.00 2.10
430 460 2.025981 TGCCCATGTTAAGAGATGCAGT 60.026 45.455 0.00 0.00 0.00 4.40
442 472 1.103803 GATGCAGTCTCGGTAGGTGA 58.896 55.000 0.00 0.00 0.00 4.02
447 477 2.223618 GCAGTCTCGGTAGGTGAAGATC 60.224 54.545 0.00 0.00 0.00 2.75
473 503 2.383245 ATCCTACGCCGCAATCCAGG 62.383 60.000 0.00 0.00 0.00 4.45
476 506 2.298158 CTACGCCGCAATCCAGGACT 62.298 60.000 0.00 0.00 0.00 3.85
482 512 0.674581 CGCAATCCAGGACTGCTTGA 60.675 55.000 20.42 0.00 32.31 3.02
507 537 3.126073 GTGAACATGAGATGAGCGCATA 58.874 45.455 11.47 0.00 35.11 3.14
520 550 3.796717 TGAGCGCATACATTAAGTCTTCG 59.203 43.478 11.47 0.00 0.00 3.79
522 552 3.797256 AGCGCATACATTAAGTCTTCGTC 59.203 43.478 11.47 0.00 0.00 4.20
526 556 5.918576 CGCATACATTAAGTCTTCGTCCATA 59.081 40.000 0.00 0.00 0.00 2.74
531 561 2.969628 AAGTCTTCGTCCATAGCCTG 57.030 50.000 0.00 0.00 0.00 4.85
533 563 1.751924 AGTCTTCGTCCATAGCCTGAC 59.248 52.381 0.00 0.00 0.00 3.51
538 568 1.683385 TCGTCCATAGCCTGACAGATG 59.317 52.381 3.32 0.00 0.00 2.90
548 578 3.479370 GACAGATGTCGCAGTGGC 58.521 61.111 0.00 0.00 35.12 5.01
610 640 0.388520 GCAAGATGCCACGGAAAACC 60.389 55.000 0.00 0.00 37.42 3.27
611 641 0.243636 CAAGATGCCACGGAAAACCC 59.756 55.000 0.00 0.00 0.00 4.11
613 643 0.112412 AGATGCCACGGAAAACCCTT 59.888 50.000 0.00 0.00 0.00 3.95
616 646 0.178975 TGCCACGGAAAACCCTTCAT 60.179 50.000 0.00 0.00 0.00 2.57
619 649 1.812571 CCACGGAAAACCCTTCATCAG 59.187 52.381 0.00 0.00 0.00 2.90
627 657 4.713792 AAACCCTTCATCAGAACACTCT 57.286 40.909 0.00 0.00 0.00 3.24
662 692 3.059597 CACTCGTAACTTCCAAAGTGCAG 60.060 47.826 0.00 0.00 41.91 4.41
665 695 3.131396 CGTAACTTCCAAAGTGCAGTCT 58.869 45.455 0.00 0.00 41.91 3.24
667 697 4.929808 CGTAACTTCCAAAGTGCAGTCTAT 59.070 41.667 0.00 0.00 41.91 1.98
670 700 7.277981 CGTAACTTCCAAAGTGCAGTCTATAAT 59.722 37.037 0.00 0.00 41.91 1.28
676 706 8.177119 TCCAAAGTGCAGTCTATAATTGTTTT 57.823 30.769 0.00 0.00 0.00 2.43
701 731 3.263489 CTGATGAAGCACCTGATCACT 57.737 47.619 0.00 0.00 0.00 3.41
702 732 2.937149 CTGATGAAGCACCTGATCACTG 59.063 50.000 0.00 0.00 0.00 3.66
703 733 2.303890 TGATGAAGCACCTGATCACTGT 59.696 45.455 0.00 0.00 0.00 3.55
704 734 2.174363 TGAAGCACCTGATCACTGTG 57.826 50.000 13.79 13.79 0.00 3.66
705 735 1.693606 TGAAGCACCTGATCACTGTGA 59.306 47.619 19.83 13.60 0.00 3.58
706 736 2.289257 TGAAGCACCTGATCACTGTGAG 60.289 50.000 19.83 5.01 0.00 3.51
707 737 0.036577 AGCACCTGATCACTGTGAGC 60.037 55.000 18.49 18.49 32.56 4.26
708 738 0.321034 GCACCTGATCACTGTGAGCA 60.321 55.000 25.15 25.15 40.87 4.26
709 739 1.436600 CACCTGATCACTGTGAGCAC 58.563 55.000 23.40 13.50 37.93 4.40
710 740 1.051008 ACCTGATCACTGTGAGCACA 58.949 50.000 23.40 16.81 37.93 4.57
726 756 2.158549 AGCACAGAGAAGAAAGGCCTTT 60.159 45.455 30.83 30.83 35.14 3.11
727 757 2.030451 GCACAGAGAAGAAAGGCCTTTG 60.030 50.000 35.05 21.17 32.11 2.77
730 760 2.487372 CAGAGAAGAAAGGCCTTTGAGC 59.513 50.000 35.05 20.29 32.11 4.26
751 781 1.671054 GGTTGCGCTGTCTGGCTAA 60.671 57.895 9.73 0.00 0.00 3.09
753 783 0.375106 GTTGCGCTGTCTGGCTAATC 59.625 55.000 9.73 0.00 0.00 1.75
759 789 1.409427 GCTGTCTGGCTAATCGGTACT 59.591 52.381 0.00 0.00 0.00 2.73
766 796 5.049129 GTCTGGCTAATCGGTACTTACGTAT 60.049 44.000 0.00 0.00 0.00 3.06
797 827 2.097038 CGCAGCTTCGACTCCCAAG 61.097 63.158 0.00 0.00 0.00 3.61
798 828 1.004440 GCAGCTTCGACTCCCAAGT 60.004 57.895 0.00 0.00 38.88 3.16
823 948 3.470645 AACTAAAACGCCAGTCTGTCT 57.529 42.857 0.00 0.00 0.00 3.41
824 949 2.755650 ACTAAAACGCCAGTCTGTCTG 58.244 47.619 0.00 0.00 43.27 3.51
825 950 2.102588 ACTAAAACGCCAGTCTGTCTGT 59.897 45.455 0.00 0.00 42.19 3.41
826 951 1.583054 AAAACGCCAGTCTGTCTGTC 58.417 50.000 0.00 0.00 42.19 3.51
827 952 0.464036 AAACGCCAGTCTGTCTGTCA 59.536 50.000 0.00 0.00 42.19 3.58
828 953 0.681733 AACGCCAGTCTGTCTGTCAT 59.318 50.000 0.00 0.00 42.19 3.06
829 954 0.037882 ACGCCAGTCTGTCTGTCATG 60.038 55.000 0.00 0.00 42.19 3.07
830 955 0.037882 CGCCAGTCTGTCTGTCATGT 60.038 55.000 0.00 0.00 42.19 3.21
831 956 1.606480 CGCCAGTCTGTCTGTCATGTT 60.606 52.381 0.00 0.00 42.19 2.71
832 957 2.072298 GCCAGTCTGTCTGTCATGTTC 58.928 52.381 0.00 0.00 42.19 3.18
833 958 2.693069 CCAGTCTGTCTGTCATGTTCC 58.307 52.381 0.00 0.00 42.19 3.62
834 959 2.301296 CCAGTCTGTCTGTCATGTTCCT 59.699 50.000 0.00 0.00 42.19 3.36
853 1011 2.046855 ATTCCCCTGCCCTCCCAT 59.953 61.111 0.00 0.00 0.00 4.00
860 1018 3.089874 TGCCCTCCCATTCCTCCG 61.090 66.667 0.00 0.00 0.00 4.63
908 1068 3.547468 GCTCACACAACAACATCACAAAC 59.453 43.478 0.00 0.00 0.00 2.93
925 1085 4.338118 CACAAACATCACCACAAACCTAGT 59.662 41.667 0.00 0.00 0.00 2.57
926 1086 4.578928 ACAAACATCACCACAAACCTAGTC 59.421 41.667 0.00 0.00 0.00 2.59
942 1102 5.544682 ACCTAGTCCAGTATAAAATGGGGA 58.455 41.667 0.00 0.00 37.19 4.81
1537 1911 1.056103 GTCGCGGATGAATCGATCTG 58.944 55.000 6.13 0.00 34.61 2.90
1555 1947 0.955428 TGCGAGTTCCCATGCAAGAC 60.955 55.000 0.00 0.00 33.80 3.01
1556 1948 1.648467 GCGAGTTCCCATGCAAGACC 61.648 60.000 0.00 0.00 0.00 3.85
1557 1949 1.361668 CGAGTTCCCATGCAAGACCG 61.362 60.000 0.00 0.00 0.00 4.79
1558 1950 1.648467 GAGTTCCCATGCAAGACCGC 61.648 60.000 0.00 0.00 0.00 5.68
1559 1951 1.675641 GTTCCCATGCAAGACCGCT 60.676 57.895 0.00 0.00 0.00 5.52
1560 1952 1.377202 TTCCCATGCAAGACCGCTC 60.377 57.895 0.00 0.00 0.00 5.03
1561 1953 3.197790 CCCATGCAAGACCGCTCG 61.198 66.667 0.00 0.00 0.00 5.03
1562 1954 2.434884 CCATGCAAGACCGCTCGT 60.435 61.111 0.00 0.00 0.00 4.18
1648 2040 2.736670 AACAGAGCAAAGGAAGGTGT 57.263 45.000 0.00 0.00 0.00 4.16
1655 2047 1.600916 AAAGGAAGGTGTCGCCAGC 60.601 57.895 4.97 0.00 40.61 4.85
1656 2048 3.883744 AAGGAAGGTGTCGCCAGCG 62.884 63.158 5.50 5.50 43.85 5.18
1658 2050 4.373116 GAAGGTGTCGCCAGCGGA 62.373 66.667 12.71 0.00 43.85 5.54
1659 2051 3.876589 GAAGGTGTCGCCAGCGGAA 62.877 63.158 12.71 0.00 43.85 4.30
1660 2052 3.469863 AAGGTGTCGCCAGCGGAAA 62.470 57.895 12.71 0.00 43.85 3.13
1661 2053 2.951475 AAGGTGTCGCCAGCGGAAAA 62.951 55.000 12.71 0.00 43.85 2.29
1662 2054 2.548295 GGTGTCGCCAGCGGAAAAA 61.548 57.895 12.71 0.00 40.25 1.94
1690 2082 3.383162 AGACCAGGTCTCACGGATT 57.617 52.632 17.31 0.00 38.71 3.01
1691 2083 2.526888 AGACCAGGTCTCACGGATTA 57.473 50.000 17.31 0.00 38.71 1.75
1692 2084 2.379972 AGACCAGGTCTCACGGATTAG 58.620 52.381 17.31 0.00 38.71 1.73
1693 2085 0.824759 ACCAGGTCTCACGGATTAGC 59.175 55.000 0.00 0.00 0.00 3.09
1694 2086 0.824109 CCAGGTCTCACGGATTAGCA 59.176 55.000 0.00 0.00 0.00 3.49
1695 2087 1.202463 CCAGGTCTCACGGATTAGCAG 60.202 57.143 0.00 0.00 0.00 4.24
1696 2088 1.115467 AGGTCTCACGGATTAGCAGG 58.885 55.000 0.00 0.00 0.00 4.85
1697 2089 0.824759 GGTCTCACGGATTAGCAGGT 59.175 55.000 0.00 0.00 0.00 4.00
1698 2090 1.471676 GGTCTCACGGATTAGCAGGTG 60.472 57.143 0.00 0.00 0.00 4.00
1699 2091 1.476891 GTCTCACGGATTAGCAGGTGA 59.523 52.381 0.00 0.00 37.77 4.02
1701 2093 1.847328 TCACGGATTAGCAGGTGAGA 58.153 50.000 0.00 0.00 34.71 3.27
1702 2094 1.476891 TCACGGATTAGCAGGTGAGAC 59.523 52.381 0.00 0.00 34.71 3.36
1703 2095 0.824759 ACGGATTAGCAGGTGAGACC 59.175 55.000 0.00 0.00 38.99 3.85
1704 2096 0.105039 CGGATTAGCAGGTGAGACCC 59.895 60.000 0.00 0.00 39.75 4.46
1705 2097 1.204146 GGATTAGCAGGTGAGACCCA 58.796 55.000 0.00 0.00 39.75 4.51
1706 2098 1.771255 GGATTAGCAGGTGAGACCCAT 59.229 52.381 0.00 0.00 39.75 4.00
1707 2099 2.173569 GGATTAGCAGGTGAGACCCATT 59.826 50.000 0.00 0.00 39.75 3.16
1708 2100 3.471680 GATTAGCAGGTGAGACCCATTC 58.528 50.000 0.00 0.00 39.75 2.67
1709 2101 2.254152 TAGCAGGTGAGACCCATTCT 57.746 50.000 0.00 0.00 39.75 2.40
1710 2102 0.617413 AGCAGGTGAGACCCATTCTG 59.383 55.000 0.00 0.00 39.75 3.02
1711 2103 0.615331 GCAGGTGAGACCCATTCTGA 59.385 55.000 0.00 0.00 39.75 3.27
1712 2104 1.211457 GCAGGTGAGACCCATTCTGAT 59.789 52.381 0.00 0.00 39.75 2.90
1713 2105 2.915349 CAGGTGAGACCCATTCTGATG 58.085 52.381 0.00 0.00 39.75 3.07
1724 2116 3.938778 CATTCTGATGGATGACACGTG 57.061 47.619 15.48 15.48 0.00 4.49
1725 2117 3.524541 CATTCTGATGGATGACACGTGA 58.475 45.455 25.01 0.00 0.00 4.35
1726 2118 2.654749 TCTGATGGATGACACGTGAC 57.345 50.000 25.01 17.68 0.00 3.67
1727 2119 1.892474 TCTGATGGATGACACGTGACA 59.108 47.619 25.01 23.44 0.00 3.58
1728 2120 2.497273 TCTGATGGATGACACGTGACAT 59.503 45.455 28.93 28.93 33.43 3.06
1729 2121 3.055891 TCTGATGGATGACACGTGACATT 60.056 43.478 29.08 16.96 31.08 2.71
1730 2122 3.261580 TGATGGATGACACGTGACATTC 58.738 45.455 29.08 27.59 31.08 2.67
1731 2123 2.829741 TGGATGACACGTGACATTCA 57.170 45.000 29.97 29.97 34.27 2.57
1732 2124 2.412870 TGGATGACACGTGACATTCAC 58.587 47.619 29.97 22.99 43.65 3.18
1747 2139 8.112099 GTGACATTCACAAATCATAAAGCATC 57.888 34.615 1.34 0.00 46.22 3.91
1748 2140 7.221452 GTGACATTCACAAATCATAAAGCATCC 59.779 37.037 1.34 0.00 46.22 3.51
1749 2141 7.093858 TGACATTCACAAATCATAAAGCATCCA 60.094 33.333 0.00 0.00 0.00 3.41
1750 2142 7.037438 ACATTCACAAATCATAAAGCATCCAC 58.963 34.615 0.00 0.00 0.00 4.02
1751 2143 5.581126 TCACAAATCATAAAGCATCCACC 57.419 39.130 0.00 0.00 0.00 4.61
1752 2144 4.402155 TCACAAATCATAAAGCATCCACCC 59.598 41.667 0.00 0.00 0.00 4.61
1753 2145 3.706086 ACAAATCATAAAGCATCCACCCC 59.294 43.478 0.00 0.00 0.00 4.95
1754 2146 3.686227 AATCATAAAGCATCCACCCCA 57.314 42.857 0.00 0.00 0.00 4.96
1755 2147 2.435372 TCATAAAGCATCCACCCCAC 57.565 50.000 0.00 0.00 0.00 4.61
1756 2148 1.064017 TCATAAAGCATCCACCCCACC 60.064 52.381 0.00 0.00 0.00 4.61
1757 2149 0.261696 ATAAAGCATCCACCCCACCC 59.738 55.000 0.00 0.00 0.00 4.61
1758 2150 1.869824 TAAAGCATCCACCCCACCCC 61.870 60.000 0.00 0.00 0.00 4.95
1775 2167 2.159179 CCCCCACCTGAAATTAAGGG 57.841 55.000 0.71 0.00 39.30 3.95
1795 2187 3.749226 GGGGGAGAGATTAGATGCTTTG 58.251 50.000 0.00 0.00 0.00 2.77
1796 2188 3.137360 GGGGGAGAGATTAGATGCTTTGT 59.863 47.826 0.00 0.00 0.00 2.83
1797 2189 4.133078 GGGGAGAGATTAGATGCTTTGTG 58.867 47.826 0.00 0.00 0.00 3.33
1798 2190 4.141620 GGGGAGAGATTAGATGCTTTGTGA 60.142 45.833 0.00 0.00 0.00 3.58
1799 2191 5.455899 GGGGAGAGATTAGATGCTTTGTGAT 60.456 44.000 0.00 0.00 0.00 3.06
1800 2192 6.060788 GGGAGAGATTAGATGCTTTGTGATT 58.939 40.000 0.00 0.00 0.00 2.57
1801 2193 6.545298 GGGAGAGATTAGATGCTTTGTGATTT 59.455 38.462 0.00 0.00 0.00 2.17
1802 2194 7.416022 GGAGAGATTAGATGCTTTGTGATTTG 58.584 38.462 0.00 0.00 0.00 2.32
1806 2198 8.114331 AGATTAGATGCTTTGTGATTTGTGAA 57.886 30.769 0.00 0.00 0.00 3.18
1809 2201 4.927425 AGATGCTTTGTGATTTGTGAATGC 59.073 37.500 0.00 0.00 0.00 3.56
1812 2204 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
1825 2217 4.642445 GAATGCCACATGTCATTCATCA 57.358 40.909 24.71 6.53 44.71 3.07
1826 2218 4.607955 GAATGCCACATGTCATTCATCAG 58.392 43.478 24.71 2.15 44.71 2.90
1827 2219 2.371306 TGCCACATGTCATTCATCAGG 58.629 47.619 0.00 0.00 34.09 3.86
1828 2220 1.679680 GCCACATGTCATTCATCAGGG 59.320 52.381 0.00 0.00 34.09 4.45
1829 2221 1.679680 CCACATGTCATTCATCAGGGC 59.320 52.381 0.00 0.00 34.09 5.19
1830 2222 1.332686 CACATGTCATTCATCAGGGCG 59.667 52.381 0.00 0.00 34.09 6.13
1831 2223 0.949397 CATGTCATTCATCAGGGCGG 59.051 55.000 0.00 0.00 34.09 6.13
1832 2224 0.179009 ATGTCATTCATCAGGGCGGG 60.179 55.000 0.00 0.00 29.76 6.13
1833 2225 1.224592 GTCATTCATCAGGGCGGGT 59.775 57.895 0.00 0.00 0.00 5.28
1834 2226 0.815615 GTCATTCATCAGGGCGGGTC 60.816 60.000 0.00 0.00 0.00 4.46
1835 2227 0.982852 TCATTCATCAGGGCGGGTCT 60.983 55.000 0.00 0.00 0.00 3.85
1836 2228 0.533755 CATTCATCAGGGCGGGTCTC 60.534 60.000 0.00 0.00 0.00 3.36
1837 2229 0.982852 ATTCATCAGGGCGGGTCTCA 60.983 55.000 0.00 0.00 0.00 3.27
1838 2230 1.899437 TTCATCAGGGCGGGTCTCAC 61.899 60.000 0.00 0.00 0.00 3.51
1839 2231 3.083997 ATCAGGGCGGGTCTCACC 61.084 66.667 0.00 0.00 37.60 4.02
1840 2232 3.625632 ATCAGGGCGGGTCTCACCT 62.626 63.158 0.00 0.00 38.64 4.00
1853 2245 6.672266 GGGTCTCACCTGATTTATATGAGA 57.328 41.667 0.00 0.00 42.63 3.27
1857 2249 7.295322 TCTCACCTGATTTATATGAGACCTG 57.705 40.000 0.00 0.00 40.59 4.00
1858 2250 6.268617 TCTCACCTGATTTATATGAGACCTGG 59.731 42.308 0.00 0.00 40.59 4.45
1859 2251 5.905331 TCACCTGATTTATATGAGACCTGGT 59.095 40.000 0.00 0.00 0.00 4.00
1860 2252 6.042093 TCACCTGATTTATATGAGACCTGGTC 59.958 42.308 19.20 19.20 0.00 4.02
1861 2253 6.042552 CACCTGATTTATATGAGACCTGGTCT 59.957 42.308 28.70 28.70 46.42 3.85
1964 2356 3.904339 TGGGGAGGTTGATTAGATAGAGC 59.096 47.826 0.00 0.00 0.00 4.09
2069 2463 4.855298 AATTCCCGAGGTCCTCATTTTA 57.145 40.909 19.15 0.33 0.00 1.52
2111 2505 7.706100 TTTTTGGGTGTAGTTTCTACACTTT 57.294 32.000 27.51 0.00 45.13 2.66
2115 2509 6.655930 TGGGTGTAGTTTCTACACTTTTCTT 58.344 36.000 27.51 0.00 45.13 2.52
2120 2514 6.764560 TGTAGTTTCTACACTTTTCTTGGTCC 59.235 38.462 5.64 0.00 0.00 4.46
2127 2521 1.880027 ACTTTTCTTGGTCCGACATGC 59.120 47.619 0.00 0.00 0.00 4.06
2149 2544 4.938226 GCTGAAACCTGCAATTAGACTAGT 59.062 41.667 0.00 0.00 0.00 2.57
2152 2547 6.711277 TGAAACCTGCAATTAGACTAGTCAT 58.289 36.000 24.44 12.01 0.00 3.06
2157 2552 8.023021 ACCTGCAATTAGACTAGTCATAATGA 57.977 34.615 24.44 1.26 0.00 2.57
2158 2553 8.486210 ACCTGCAATTAGACTAGTCATAATGAA 58.514 33.333 24.44 11.47 0.00 2.57
2159 2554 8.986847 CCTGCAATTAGACTAGTCATAATGAAG 58.013 37.037 24.44 18.79 0.00 3.02
2185 2580 9.933175 GAGTAACATACATTAATAACATACGCG 57.067 33.333 3.53 3.53 0.00 6.01
2186 2581 9.467258 AGTAACATACATTAATAACATACGCGT 57.533 29.630 19.17 19.17 0.00 6.01
2194 2589 9.350357 ACATTAATAACATACGCGTATTCCTAG 57.650 33.333 28.35 18.73 0.00 3.02
2195 2590 9.563898 CATTAATAACATACGCGTATTCCTAGA 57.436 33.333 28.35 12.58 0.00 2.43
2204 2599 6.814506 ACGCGTATTCCTAGACTATGTTAT 57.185 37.500 11.67 0.00 0.00 1.89
2252 2647 3.634397 AGTAAGTGTGGTAGCATGCAT 57.366 42.857 21.98 7.68 0.00 3.96
2253 2648 4.753516 AGTAAGTGTGGTAGCATGCATA 57.246 40.909 21.98 6.62 0.00 3.14
2254 2649 4.697514 AGTAAGTGTGGTAGCATGCATAG 58.302 43.478 21.98 0.00 0.00 2.23
2267 2662 7.965107 GGTAGCATGCATAGCTTCATTTATTAC 59.035 37.037 21.98 13.87 43.25 1.89
2268 2663 7.756395 AGCATGCATAGCTTCATTTATTACT 57.244 32.000 21.98 0.00 39.87 2.24
2269 2664 8.853077 AGCATGCATAGCTTCATTTATTACTA 57.147 30.769 21.98 0.00 39.87 1.82
2270 2665 8.725148 AGCATGCATAGCTTCATTTATTACTAC 58.275 33.333 21.98 0.00 39.87 2.73
2271 2666 7.965107 GCATGCATAGCTTCATTTATTACTACC 59.035 37.037 14.21 0.00 0.00 3.18
2272 2667 9.224267 CATGCATAGCTTCATTTATTACTACCT 57.776 33.333 0.00 0.00 0.00 3.08
2273 2668 8.833231 TGCATAGCTTCATTTATTACTACCTC 57.167 34.615 0.00 0.00 0.00 3.85
2274 2669 7.878127 TGCATAGCTTCATTTATTACTACCTCC 59.122 37.037 0.00 0.00 0.00 4.30
2276 2671 6.481434 AGCTTCATTTATTACTACCTCCGT 57.519 37.500 0.00 0.00 0.00 4.69
2277 2672 6.514063 AGCTTCATTTATTACTACCTCCGTC 58.486 40.000 0.00 0.00 0.00 4.79
2278 2673 5.695363 GCTTCATTTATTACTACCTCCGTCC 59.305 44.000 0.00 0.00 0.00 4.79
2279 2674 6.462628 GCTTCATTTATTACTACCTCCGTCCT 60.463 42.308 0.00 0.00 0.00 3.85
2280 2675 6.401047 TCATTTATTACTACCTCCGTCCTG 57.599 41.667 0.00 0.00 0.00 3.86
2281 2676 5.303589 TCATTTATTACTACCTCCGTCCTGG 59.696 44.000 0.00 0.00 40.09 4.45
2282 2677 2.842645 ATTACTACCTCCGTCCTGGT 57.157 50.000 0.00 0.00 39.52 4.00
2283 2678 2.610438 TTACTACCTCCGTCCTGGTT 57.390 50.000 0.00 0.00 39.52 3.67
2284 2679 2.610438 TACTACCTCCGTCCTGGTTT 57.390 50.000 0.00 0.00 39.52 3.27
2286 2681 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
2287 2682 4.255510 ACTACCTCCGTCCTGGTTTATA 57.744 45.455 0.00 0.00 39.52 0.98
2289 2684 2.395619 ACCTCCGTCCTGGTTTATAGG 58.604 52.381 0.00 0.00 39.52 2.57
2291 2686 2.364647 CCTCCGTCCTGGTTTATAGGTC 59.635 54.545 0.00 0.00 39.52 3.85
2292 2687 2.364647 CTCCGTCCTGGTTTATAGGTCC 59.635 54.545 0.00 0.00 39.52 4.46
2293 2688 1.415289 CCGTCCTGGTTTATAGGTCCC 59.585 57.143 0.00 0.00 36.67 4.46
2295 2690 2.770232 CGTCCTGGTTTATAGGTCCCTT 59.230 50.000 0.00 0.00 36.67 3.95
2296 2691 3.199289 CGTCCTGGTTTATAGGTCCCTTT 59.801 47.826 0.00 0.00 36.67 3.11
2297 2692 4.324022 CGTCCTGGTTTATAGGTCCCTTTT 60.324 45.833 0.00 0.00 36.67 2.27
2298 2693 4.948004 GTCCTGGTTTATAGGTCCCTTTTG 59.052 45.833 0.00 0.00 36.67 2.44
2299 2694 4.604490 TCCTGGTTTATAGGTCCCTTTTGT 59.396 41.667 0.00 0.00 36.67 2.83
2301 2696 6.069847 TCCTGGTTTATAGGTCCCTTTTGTAG 60.070 42.308 0.00 0.00 36.67 2.74
2302 2697 6.296836 CCTGGTTTATAGGTCCCTTTTGTAGT 60.297 42.308 0.00 0.00 0.00 2.73
2303 2698 7.093965 TGGTTTATAGGTCCCTTTTGTAGTT 57.906 36.000 0.00 0.00 0.00 2.24
2304 2699 7.528675 TGGTTTATAGGTCCCTTTTGTAGTTT 58.471 34.615 0.00 0.00 0.00 2.66
2306 2701 7.449395 GGTTTATAGGTCCCTTTTGTAGTTTGT 59.551 37.037 0.00 0.00 0.00 2.83
2307 2702 7.989416 TTATAGGTCCCTTTTGTAGTTTGTG 57.011 36.000 0.00 0.00 0.00 3.33
2308 2703 2.956333 AGGTCCCTTTTGTAGTTTGTGC 59.044 45.455 0.00 0.00 0.00 4.57
2309 2704 2.035449 GGTCCCTTTTGTAGTTTGTGCC 59.965 50.000 0.00 0.00 0.00 5.01
2310 2705 2.691011 GTCCCTTTTGTAGTTTGTGCCA 59.309 45.455 0.00 0.00 0.00 4.92
2311 2706 3.131400 GTCCCTTTTGTAGTTTGTGCCAA 59.869 43.478 0.00 0.00 0.00 4.52
2312 2707 3.769844 TCCCTTTTGTAGTTTGTGCCAAA 59.230 39.130 0.00 0.00 0.00 3.28
2313 2708 4.407296 TCCCTTTTGTAGTTTGTGCCAAAT 59.593 37.500 4.07 0.00 0.00 2.32
2314 2709 5.104735 TCCCTTTTGTAGTTTGTGCCAAATT 60.105 36.000 4.07 3.14 0.00 1.82
2315 2710 5.588246 CCCTTTTGTAGTTTGTGCCAAATTT 59.412 36.000 4.07 0.00 0.00 1.82
2316 2711 6.094742 CCCTTTTGTAGTTTGTGCCAAATTTT 59.905 34.615 4.07 0.00 0.00 1.82
2317 2712 6.966066 CCTTTTGTAGTTTGTGCCAAATTTTG 59.034 34.615 1.99 1.99 0.00 2.44
2318 2713 7.148340 CCTTTTGTAGTTTGTGCCAAATTTTGA 60.148 33.333 10.72 0.00 0.00 2.69
2319 2714 6.654793 TTGTAGTTTGTGCCAAATTTTGAC 57.345 33.333 10.72 0.00 0.00 3.18
2320 2715 5.971763 TGTAGTTTGTGCCAAATTTTGACT 58.028 33.333 10.72 7.29 0.00 3.41
2321 2716 7.101652 TGTAGTTTGTGCCAAATTTTGACTA 57.898 32.000 10.72 6.41 0.00 2.59
2322 2717 7.548097 TGTAGTTTGTGCCAAATTTTGACTAA 58.452 30.769 10.72 2.90 0.00 2.24
2323 2718 8.035394 TGTAGTTTGTGCCAAATTTTGACTAAA 58.965 29.630 10.72 2.25 0.00 1.85
2324 2719 7.538303 AGTTTGTGCCAAATTTTGACTAAAG 57.462 32.000 10.72 0.00 0.00 1.85
2325 2720 7.327214 AGTTTGTGCCAAATTTTGACTAAAGA 58.673 30.769 10.72 0.00 0.00 2.52
2326 2721 7.986889 AGTTTGTGCCAAATTTTGACTAAAGAT 59.013 29.630 10.72 0.00 0.00 2.40
2327 2722 8.611757 GTTTGTGCCAAATTTTGACTAAAGATT 58.388 29.630 10.72 0.00 0.00 2.40
2328 2723 8.729805 TTGTGCCAAATTTTGACTAAAGATTT 57.270 26.923 10.72 0.00 0.00 2.17
2329 2724 9.823647 TTGTGCCAAATTTTGACTAAAGATTTA 57.176 25.926 10.72 0.00 0.00 1.40
2330 2725 9.823647 TGTGCCAAATTTTGACTAAAGATTTAA 57.176 25.926 10.72 0.00 0.00 1.52
2355 2750 9.539825 AACTAACAAAATGTTAATGCATGTCAA 57.460 25.926 0.00 0.00 41.70 3.18
2356 2751 9.195411 ACTAACAAAATGTTAATGCATGTCAAG 57.805 29.630 0.00 0.00 41.70 3.02
2357 2752 9.409312 CTAACAAAATGTTAATGCATGTCAAGA 57.591 29.630 0.00 0.00 41.70 3.02
2358 2753 8.659925 AACAAAATGTTAATGCATGTCAAGAA 57.340 26.923 0.00 0.00 39.09 2.52
2359 2754 8.659925 ACAAAATGTTAATGCATGTCAAGAAA 57.340 26.923 0.00 0.00 0.00 2.52
2360 2755 9.107177 ACAAAATGTTAATGCATGTCAAGAAAA 57.893 25.926 0.00 0.00 0.00 2.29
2361 2756 9.932699 CAAAATGTTAATGCATGTCAAGAAAAA 57.067 25.926 0.00 0.00 0.00 1.94
2372 2767 9.361315 TGCATGTCAAGAAAAATTATCTCATTG 57.639 29.630 0.00 0.00 0.00 2.82
2373 2768 8.814235 GCATGTCAAGAAAAATTATCTCATTGG 58.186 33.333 0.00 0.00 0.00 3.16
2379 2774 9.793252 CAAGAAAAATTATCTCATTGGATTCGT 57.207 29.630 0.00 0.00 0.00 3.85
2388 2783 7.864108 ATCTCATTGGATTCGTATTTGAACA 57.136 32.000 0.00 0.00 0.00 3.18
2389 2784 7.864108 TCTCATTGGATTCGTATTTGAACAT 57.136 32.000 0.00 0.00 0.00 2.71
2390 2785 8.956533 TCTCATTGGATTCGTATTTGAACATA 57.043 30.769 0.00 0.00 0.00 2.29
2391 2786 9.045223 TCTCATTGGATTCGTATTTGAACATAG 57.955 33.333 0.00 0.00 0.00 2.23
2392 2787 8.731275 TCATTGGATTCGTATTTGAACATAGT 57.269 30.769 0.00 0.00 0.00 2.12
2393 2788 9.173021 TCATTGGATTCGTATTTGAACATAGTT 57.827 29.630 0.00 0.00 0.00 2.24
2394 2789 9.787532 CATTGGATTCGTATTTGAACATAGTTT 57.212 29.630 0.00 0.00 0.00 2.66
2396 2791 9.834628 TTGGATTCGTATTTGAACATAGTTTTC 57.165 29.630 0.00 0.00 0.00 2.29
2397 2792 9.004717 TGGATTCGTATTTGAACATAGTTTTCA 57.995 29.630 0.00 0.00 0.00 2.69
2398 2793 9.834628 GGATTCGTATTTGAACATAGTTTTCAA 57.165 29.630 0.00 0.00 40.42 2.69
2421 2816 9.149225 TCAAAAATATAATGTTTGGTGACATGC 57.851 29.630 0.00 0.00 40.03 4.06
2422 2817 8.933807 CAAAAATATAATGTTTGGTGACATGCA 58.066 29.630 0.00 0.00 40.03 3.96
2423 2818 9.669887 AAAAATATAATGTTTGGTGACATGCAT 57.330 25.926 0.00 0.00 40.03 3.96
2424 2819 8.651391 AAATATAATGTTTGGTGACATGCATG 57.349 30.769 25.09 25.09 40.03 4.06
2425 2820 5.918426 ATAATGTTTGGTGACATGCATGA 57.082 34.783 32.75 9.00 40.03 3.07
2426 2821 4.603989 AATGTTTGGTGACATGCATGAA 57.396 36.364 32.75 17.28 40.03 2.57
2427 2822 3.367992 TGTTTGGTGACATGCATGAAC 57.632 42.857 32.75 26.11 42.32 3.18
2428 2823 2.692041 TGTTTGGTGACATGCATGAACA 59.308 40.909 32.75 25.17 42.32 3.18
2429 2824 3.321396 TGTTTGGTGACATGCATGAACAT 59.679 39.130 32.75 10.70 42.32 2.71
2430 2825 4.202233 TGTTTGGTGACATGCATGAACATT 60.202 37.500 32.75 10.28 42.32 2.71
2431 2826 4.603989 TTGGTGACATGCATGAACATTT 57.396 36.364 32.75 9.47 42.32 2.32
2432 2827 4.603989 TGGTGACATGCATGAACATTTT 57.396 36.364 32.75 8.66 33.40 1.82
2433 2828 4.308265 TGGTGACATGCATGAACATTTTG 58.692 39.130 32.75 5.04 33.40 2.44
2434 2829 4.202233 TGGTGACATGCATGAACATTTTGT 60.202 37.500 32.75 8.74 33.40 2.83
2435 2830 4.751098 GGTGACATGCATGAACATTTTGTT 59.249 37.500 32.75 6.24 44.37 2.83
2436 2831 5.925397 GGTGACATGCATGAACATTTTGTTA 59.075 36.000 32.75 2.51 41.28 2.41
2437 2832 6.089820 GGTGACATGCATGAACATTTTGTTAG 59.910 38.462 32.75 1.29 41.28 2.34
2438 2833 6.642131 GTGACATGCATGAACATTTTGTTAGT 59.358 34.615 32.75 4.97 41.28 2.24
2439 2834 7.169645 GTGACATGCATGAACATTTTGTTAGTT 59.830 33.333 32.75 4.26 41.28 2.24
2440 2835 7.710044 TGACATGCATGAACATTTTGTTAGTTT 59.290 29.630 32.75 3.85 41.28 2.66
2441 2836 9.190858 GACATGCATGAACATTTTGTTAGTTTA 57.809 29.630 32.75 0.00 41.28 2.01
2442 2837 9.539825 ACATGCATGAACATTTTGTTAGTTTAA 57.460 25.926 32.75 0.00 41.28 1.52
2445 2840 9.979578 TGCATGAACATTTTGTTAGTTTAATCT 57.020 25.926 0.00 0.00 41.28 2.40
2462 2857 8.592809 AGTTTAATCTATGGTCAAAATTTGGCA 58.407 29.630 12.62 0.00 36.88 4.92
2463 2858 8.655970 GTTTAATCTATGGTCAAAATTTGGCAC 58.344 33.333 12.62 1.03 36.88 5.01
2464 2859 4.433186 TCTATGGTCAAAATTTGGCACG 57.567 40.909 12.62 0.00 36.88 5.34
2465 2860 4.075682 TCTATGGTCAAAATTTGGCACGA 58.924 39.130 12.62 0.00 36.88 4.35
2466 2861 3.742433 ATGGTCAAAATTTGGCACGAA 57.258 38.095 12.62 0.00 36.88 3.85
2467 2862 3.526931 TGGTCAAAATTTGGCACGAAA 57.473 38.095 12.62 0.00 36.88 3.46
2468 2863 4.065321 TGGTCAAAATTTGGCACGAAAT 57.935 36.364 12.62 0.00 36.88 2.17
2469 2864 5.201713 TGGTCAAAATTTGGCACGAAATA 57.798 34.783 12.62 0.00 36.88 1.40
2470 2865 4.985409 TGGTCAAAATTTGGCACGAAATAC 59.015 37.500 12.62 0.00 36.88 1.89
2471 2866 4.985409 GGTCAAAATTTGGCACGAAATACA 59.015 37.500 12.62 0.00 36.88 2.29
2472 2867 5.463724 GGTCAAAATTTGGCACGAAATACAA 59.536 36.000 12.62 0.00 36.88 2.41
2473 2868 6.147000 GGTCAAAATTTGGCACGAAATACAAT 59.853 34.615 12.62 0.00 36.88 2.71
2474 2869 7.008859 GTCAAAATTTGGCACGAAATACAATG 58.991 34.615 5.33 0.00 34.79 2.82
2475 2870 6.146837 TCAAAATTTGGCACGAAATACAATGG 59.853 34.615 5.83 0.00 0.00 3.16
2476 2871 3.584406 TTTGGCACGAAATACAATGGG 57.416 42.857 0.00 0.00 0.00 4.00
2477 2872 1.468985 TGGCACGAAATACAATGGGG 58.531 50.000 0.00 0.00 0.00 4.96
2478 2873 1.004862 TGGCACGAAATACAATGGGGA 59.995 47.619 0.00 0.00 0.00 4.81
2479 2874 1.404035 GGCACGAAATACAATGGGGAC 59.596 52.381 0.00 0.00 0.00 4.46
2494 2889 1.589803 GGGACCAATAAATCCGGACG 58.410 55.000 6.12 0.00 35.67 4.79
2495 2890 1.589803 GGACCAATAAATCCGGACGG 58.410 55.000 6.12 3.96 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.467734 GGTGTGATCTTTGCTCAGCTG 59.532 52.381 7.63 7.63 0.00 4.24
85 86 2.192443 CGCTAGAGGGGGTCTCGA 59.808 66.667 0.00 0.00 46.82 4.04
91 92 4.554036 GCAAGCCGCTAGAGGGGG 62.554 72.222 14.91 2.28 46.98 5.40
125 126 0.104120 TTGCCCGGTCTCACATATCG 59.896 55.000 0.00 0.00 0.00 2.92
147 150 5.182380 TCAATACTGATGGTTCGGTTTTTCC 59.818 40.000 0.00 0.00 41.74 3.13
148 151 6.249035 TCAATACTGATGGTTCGGTTTTTC 57.751 37.500 0.00 0.00 41.74 2.29
198 228 4.660938 ACGGGGCAAGGCTGGAAC 62.661 66.667 0.00 0.00 0.00 3.62
203 233 2.606519 TACAGACGGGGCAAGGCT 60.607 61.111 0.00 0.00 0.00 4.58
213 243 1.429463 GTTGGCCAAGAGTACAGACG 58.571 55.000 21.21 0.00 0.00 4.18
230 260 6.675413 TCATACTTAATATACCTGCCCGTT 57.325 37.500 0.00 0.00 0.00 4.44
242 272 9.967451 TCCATGAAACCTTGTTCATACTTAATA 57.033 29.630 0.00 0.00 44.58 0.98
245 275 7.556275 GGATCCATGAAACCTTGTTCATACTTA 59.444 37.037 6.95 0.00 44.58 2.24
246 276 6.378280 GGATCCATGAAACCTTGTTCATACTT 59.622 38.462 6.95 0.00 44.58 2.24
250 280 4.463891 GTGGATCCATGAAACCTTGTTCAT 59.536 41.667 19.62 0.00 46.77 2.57
253 283 4.118168 AGTGGATCCATGAAACCTTGTT 57.882 40.909 19.62 0.00 0.00 2.83
273 303 0.811616 CCCTAGTGCAGGCGCTTAAG 60.812 60.000 13.05 5.23 43.98 1.85
276 306 3.003173 TCCCTAGTGCAGGCGCTT 61.003 61.111 13.05 0.00 43.98 4.68
279 309 0.741221 GTTTCTCCCTAGTGCAGGCG 60.741 60.000 0.00 0.00 43.98 5.52
297 327 4.341500 AATGGACTCATGACCAAGAGGGT 61.341 47.826 8.97 0.00 42.60 4.34
339 369 2.008752 TCATCACGATCATGCACGTT 57.991 45.000 12.71 0.11 40.76 3.99
340 370 1.862827 CATCATCACGATCATGCACGT 59.137 47.619 10.28 10.28 43.50 4.49
342 372 3.614588 CAACATCATCACGATCATGCAC 58.385 45.455 0.00 0.00 29.21 4.57
357 387 5.814188 TCTGATGATACTCTGTTGCAACATC 59.186 40.000 31.17 24.24 38.41 3.06
360 390 6.486253 TTTCTGATGATACTCTGTTGCAAC 57.514 37.500 22.83 22.83 0.00 4.17
368 398 9.636879 CGATGATATGTTTTCTGATGATACTCT 57.363 33.333 0.00 0.00 0.00 3.24
378 408 5.980698 AGTGCTCGATGATATGTTTTCTG 57.019 39.130 0.00 0.00 0.00 3.02
382 412 5.928839 GGATGTAGTGCTCGATGATATGTTT 59.071 40.000 0.00 0.00 0.00 2.83
388 418 1.270826 CGGGATGTAGTGCTCGATGAT 59.729 52.381 0.00 0.00 0.00 2.45
392 422 1.807226 CACGGGATGTAGTGCTCGA 59.193 57.895 0.00 0.00 0.00 4.04
393 423 4.402192 CACGGGATGTAGTGCTCG 57.598 61.111 0.00 0.00 0.00 5.03
398 428 1.271840 ACATGGGCACGGGATGTAGT 61.272 55.000 0.00 0.00 0.00 2.73
400 430 1.205055 TAACATGGGCACGGGATGTA 58.795 50.000 0.00 0.00 30.07 2.29
402 432 1.024271 CTTAACATGGGCACGGGATG 58.976 55.000 0.00 0.00 0.00 3.51
406 436 1.942657 CATCTCTTAACATGGGCACGG 59.057 52.381 0.00 0.00 0.00 4.94
422 452 1.107114 CACCTACCGAGACTGCATCT 58.893 55.000 0.00 0.00 41.91 2.90
430 460 2.681848 GTTCGATCTTCACCTACCGAGA 59.318 50.000 0.00 0.00 0.00 4.04
447 477 2.353145 CGGCGTAGGATCGGTTCG 60.353 66.667 0.00 0.00 0.00 3.95
459 489 3.706373 AGTCCTGGATTGCGGCGT 61.706 61.111 9.37 0.00 0.00 5.68
473 503 3.818387 CATGTTCACATGTCAAGCAGTC 58.182 45.455 11.21 0.00 46.40 3.51
507 537 4.406003 AGGCTATGGACGAAGACTTAATGT 59.594 41.667 0.00 0.00 0.00 2.71
520 550 2.544694 CGACATCTGTCAGGCTATGGAC 60.545 54.545 10.69 0.00 44.99 4.02
522 552 1.871408 GCGACATCTGTCAGGCTATGG 60.871 57.143 10.69 0.00 44.99 2.74
526 556 1.217511 CTGCGACATCTGTCAGGCT 59.782 57.895 10.69 0.00 44.99 4.58
531 561 2.103042 GGCCACTGCGACATCTGTC 61.103 63.158 0.00 0.07 41.47 3.51
533 563 3.190849 CGGCCACTGCGACATCTG 61.191 66.667 2.24 0.00 38.85 2.90
548 578 1.354337 CGACACATCAAGCCACTCGG 61.354 60.000 0.00 0.00 0.00 4.63
604 634 5.066593 AGAGTGTTCTGATGAAGGGTTTTC 58.933 41.667 0.00 0.00 32.15 2.29
606 636 4.713792 AGAGTGTTCTGATGAAGGGTTT 57.286 40.909 0.00 0.00 32.15 3.27
682 712 2.303890 ACAGTGATCAGGTGCTTCATCA 59.696 45.455 0.00 0.00 0.00 3.07
685 715 1.693606 TCACAGTGATCAGGTGCTTCA 59.306 47.619 18.29 3.45 32.69 3.02
686 716 2.344950 CTCACAGTGATCAGGTGCTTC 58.655 52.381 18.29 0.00 32.69 3.86
690 720 1.270465 TGTGCTCACAGTGATCAGGTG 60.270 52.381 17.39 17.39 36.21 4.00
701 731 2.808202 GCCTTTCTTCTCTGTGCTCACA 60.808 50.000 2.48 2.48 39.32 3.58
702 732 1.803555 GCCTTTCTTCTCTGTGCTCAC 59.196 52.381 0.00 0.00 0.00 3.51
703 733 1.271054 GGCCTTTCTTCTCTGTGCTCA 60.271 52.381 0.00 0.00 0.00 4.26
704 734 1.003003 AGGCCTTTCTTCTCTGTGCTC 59.997 52.381 0.00 0.00 0.00 4.26
705 735 1.063183 AGGCCTTTCTTCTCTGTGCT 58.937 50.000 0.00 0.00 0.00 4.40
706 736 1.902938 AAGGCCTTTCTTCTCTGTGC 58.097 50.000 13.78 0.00 0.00 4.57
707 737 3.480470 TCAAAGGCCTTTCTTCTCTGTG 58.520 45.455 28.16 14.31 0.00 3.66
708 738 3.749226 CTCAAAGGCCTTTCTTCTCTGT 58.251 45.455 28.16 0.50 0.00 3.41
709 739 2.487372 GCTCAAAGGCCTTTCTTCTCTG 59.513 50.000 28.16 15.81 0.00 3.35
710 740 2.789213 GCTCAAAGGCCTTTCTTCTCT 58.211 47.619 28.16 2.21 0.00 3.10
711 741 1.466558 CGCTCAAAGGCCTTTCTTCTC 59.533 52.381 28.16 13.71 0.00 2.87
712 742 1.528129 CGCTCAAAGGCCTTTCTTCT 58.472 50.000 28.16 3.93 0.00 2.85
741 771 3.065786 CGTAAGTACCGATTAGCCAGACA 59.934 47.826 0.00 0.00 0.00 3.41
766 796 0.531090 AGCTGCGTTTACGTGGTGAA 60.531 50.000 0.00 0.00 42.22 3.18
797 827 1.951602 ACTGGCGTTTTAGTTTGGGAC 59.048 47.619 0.00 0.00 0.00 4.46
798 828 2.158726 AGACTGGCGTTTTAGTTTGGGA 60.159 45.455 0.00 0.00 0.00 4.37
799 829 2.031157 CAGACTGGCGTTTTAGTTTGGG 60.031 50.000 0.00 0.00 0.00 4.12
800 830 2.616842 ACAGACTGGCGTTTTAGTTTGG 59.383 45.455 7.51 0.00 34.41 3.28
801 831 3.560068 AGACAGACTGGCGTTTTAGTTTG 59.440 43.478 7.51 0.00 35.74 2.93
802 832 3.560068 CAGACAGACTGGCGTTTTAGTTT 59.440 43.478 7.51 0.00 42.39 2.66
803 833 3.131396 CAGACAGACTGGCGTTTTAGTT 58.869 45.455 7.51 0.00 42.39 2.24
804 834 2.755650 CAGACAGACTGGCGTTTTAGT 58.244 47.619 7.51 0.00 42.39 2.24
823 948 2.025981 CAGGGGAATGAGGAACATGACA 60.026 50.000 0.00 0.00 39.39 3.58
824 949 2.648059 CAGGGGAATGAGGAACATGAC 58.352 52.381 0.00 0.00 39.39 3.06
825 950 1.064463 GCAGGGGAATGAGGAACATGA 60.064 52.381 0.00 0.00 39.39 3.07
826 951 1.396653 GCAGGGGAATGAGGAACATG 58.603 55.000 0.00 0.00 39.39 3.21
827 952 0.259938 GGCAGGGGAATGAGGAACAT 59.740 55.000 0.00 0.00 41.45 2.71
828 953 1.691219 GGCAGGGGAATGAGGAACA 59.309 57.895 0.00 0.00 0.00 3.18
829 954 1.076705 GGGCAGGGGAATGAGGAAC 60.077 63.158 0.00 0.00 0.00 3.62
830 955 1.230281 AGGGCAGGGGAATGAGGAA 60.230 57.895 0.00 0.00 0.00 3.36
831 956 1.694169 GAGGGCAGGGGAATGAGGA 60.694 63.158 0.00 0.00 0.00 3.71
832 957 2.761465 GGAGGGCAGGGGAATGAGG 61.761 68.421 0.00 0.00 0.00 3.86
833 958 2.761465 GGGAGGGCAGGGGAATGAG 61.761 68.421 0.00 0.00 0.00 2.90
834 959 2.696125 GGGAGGGCAGGGGAATGA 60.696 66.667 0.00 0.00 0.00 2.57
860 1018 1.019278 TTTGAGACGGCGATGGAAGC 61.019 55.000 16.62 0.00 0.00 3.86
908 1068 3.244561 ACTGGACTAGGTTTGTGGTGATG 60.245 47.826 0.00 0.00 0.00 3.07
925 1085 4.415179 TGCAGATCCCCATTTTATACTGGA 59.585 41.667 0.00 0.00 34.24 3.86
926 1086 4.728772 TGCAGATCCCCATTTTATACTGG 58.271 43.478 0.00 0.00 0.00 4.00
942 1102 1.300465 CGCCGCTAGACATGCAGAT 60.300 57.895 0.00 0.00 0.00 2.90
1537 1911 1.648467 GGTCTTGCATGGGAACTCGC 61.648 60.000 0.00 0.00 0.00 5.03
1555 1947 2.459421 ATATTCGAGCGGACGAGCGG 62.459 60.000 0.00 0.00 43.04 5.52
1556 1948 1.082038 ATATTCGAGCGGACGAGCG 60.082 57.895 0.00 0.00 43.04 5.03
1557 1949 1.004277 CCATATTCGAGCGGACGAGC 61.004 60.000 0.00 0.00 43.04 5.03
1558 1950 0.591659 TCCATATTCGAGCGGACGAG 59.408 55.000 0.00 0.00 43.04 4.18
1559 1951 1.026584 TTCCATATTCGAGCGGACGA 58.973 50.000 0.00 0.00 40.55 4.20
1560 1952 1.847818 TTTCCATATTCGAGCGGACG 58.152 50.000 0.00 0.00 0.00 4.79
1606 1998 1.360911 GAATCGTCGGAGCCTCTCC 59.639 63.158 2.83 2.83 46.44 3.71
1607 1999 1.360911 GGAATCGTCGGAGCCTCTC 59.639 63.158 0.00 0.00 0.00 3.20
1608 2000 2.482333 CGGAATCGTCGGAGCCTCT 61.482 63.158 0.00 0.00 0.00 3.69
1609 2001 2.026301 CGGAATCGTCGGAGCCTC 59.974 66.667 0.00 0.00 0.00 4.70
1672 2064 2.379972 CTAATCCGTGAGACCTGGTCT 58.620 52.381 28.70 28.70 46.42 3.85
1673 2065 1.202428 GCTAATCCGTGAGACCTGGTC 60.202 57.143 19.20 19.20 0.00 4.02
1674 2066 0.824759 GCTAATCCGTGAGACCTGGT 59.175 55.000 0.00 0.00 0.00 4.00
1675 2067 0.824109 TGCTAATCCGTGAGACCTGG 59.176 55.000 0.00 0.00 0.00 4.45
1676 2068 1.202463 CCTGCTAATCCGTGAGACCTG 60.202 57.143 0.00 0.00 0.00 4.00
1677 2069 1.115467 CCTGCTAATCCGTGAGACCT 58.885 55.000 0.00 0.00 0.00 3.85
1678 2070 0.824759 ACCTGCTAATCCGTGAGACC 59.175 55.000 0.00 0.00 0.00 3.85
1679 2071 1.476891 TCACCTGCTAATCCGTGAGAC 59.523 52.381 0.00 0.00 31.80 3.36
1680 2072 1.847328 TCACCTGCTAATCCGTGAGA 58.153 50.000 0.00 0.00 31.80 3.27
1681 2073 2.215907 CTCACCTGCTAATCCGTGAG 57.784 55.000 2.01 2.01 44.38 3.51
1682 2074 1.476891 GTCTCACCTGCTAATCCGTGA 59.523 52.381 0.00 0.00 34.26 4.35
1683 2075 1.471676 GGTCTCACCTGCTAATCCGTG 60.472 57.143 0.00 0.00 34.73 4.94
1684 2076 0.824759 GGTCTCACCTGCTAATCCGT 59.175 55.000 0.00 0.00 34.73 4.69
1685 2077 0.105039 GGGTCTCACCTGCTAATCCG 59.895 60.000 0.00 0.00 38.64 4.18
1686 2078 1.204146 TGGGTCTCACCTGCTAATCC 58.796 55.000 0.00 0.00 38.64 3.01
1687 2079 3.135530 AGAATGGGTCTCACCTGCTAATC 59.864 47.826 0.00 0.00 38.64 1.75
1688 2080 3.118112 CAGAATGGGTCTCACCTGCTAAT 60.118 47.826 0.00 0.00 38.64 1.73
1689 2081 2.237143 CAGAATGGGTCTCACCTGCTAA 59.763 50.000 0.00 0.00 38.64 3.09
1690 2082 1.833630 CAGAATGGGTCTCACCTGCTA 59.166 52.381 0.00 0.00 38.64 3.49
1691 2083 0.617413 CAGAATGGGTCTCACCTGCT 59.383 55.000 0.00 0.00 38.64 4.24
1692 2084 0.615331 TCAGAATGGGTCTCACCTGC 59.385 55.000 0.22 0.00 38.64 4.85
1693 2085 2.915349 CATCAGAATGGGTCTCACCTG 58.085 52.381 0.00 0.00 38.64 4.00
1694 2086 3.893100 ATCCATCAGAATGGGTCTCACCT 60.893 47.826 4.68 0.00 43.29 4.00
1695 2087 2.441001 ATCCATCAGAATGGGTCTCACC 59.559 50.000 4.68 0.00 43.29 4.02
1696 2088 3.135348 TCATCCATCAGAATGGGTCTCAC 59.865 47.826 4.68 0.00 43.29 3.51
1697 2089 3.135348 GTCATCCATCAGAATGGGTCTCA 59.865 47.826 4.68 0.00 43.29 3.27
1698 2090 3.135348 TGTCATCCATCAGAATGGGTCTC 59.865 47.826 4.68 0.00 43.29 3.36
1699 2091 3.117745 TGTCATCCATCAGAATGGGTCT 58.882 45.455 4.68 0.00 43.29 3.85
1700 2092 3.209410 GTGTCATCCATCAGAATGGGTC 58.791 50.000 4.68 0.00 43.29 4.46
1704 2096 3.308053 GTCACGTGTCATCCATCAGAATG 59.692 47.826 16.51 0.00 37.54 2.67
1705 2097 3.055891 TGTCACGTGTCATCCATCAGAAT 60.056 43.478 16.51 0.00 0.00 2.40
1706 2098 2.298729 TGTCACGTGTCATCCATCAGAA 59.701 45.455 16.51 0.00 0.00 3.02
1707 2099 1.892474 TGTCACGTGTCATCCATCAGA 59.108 47.619 16.51 0.00 0.00 3.27
1708 2100 2.368655 TGTCACGTGTCATCCATCAG 57.631 50.000 16.51 0.00 0.00 2.90
1709 2101 3.261580 GAATGTCACGTGTCATCCATCA 58.738 45.455 24.84 9.40 0.00 3.07
1710 2102 3.062639 GTGAATGTCACGTGTCATCCATC 59.937 47.826 24.84 19.34 37.67 3.51
1711 2103 3.002791 GTGAATGTCACGTGTCATCCAT 58.997 45.455 24.84 12.42 37.67 3.41
1712 2104 2.412870 GTGAATGTCACGTGTCATCCA 58.587 47.619 24.84 18.07 37.67 3.41
1723 2115 7.093858 TGGATGCTTTATGATTTGTGAATGTCA 60.094 33.333 0.00 0.00 0.00 3.58
1724 2116 7.221452 GTGGATGCTTTATGATTTGTGAATGTC 59.779 37.037 0.00 0.00 0.00 3.06
1725 2117 7.037438 GTGGATGCTTTATGATTTGTGAATGT 58.963 34.615 0.00 0.00 0.00 2.71
1726 2118 6.477688 GGTGGATGCTTTATGATTTGTGAATG 59.522 38.462 0.00 0.00 0.00 2.67
1727 2119 6.407299 GGGTGGATGCTTTATGATTTGTGAAT 60.407 38.462 0.00 0.00 0.00 2.57
1728 2120 5.105392 GGGTGGATGCTTTATGATTTGTGAA 60.105 40.000 0.00 0.00 0.00 3.18
1729 2121 4.402155 GGGTGGATGCTTTATGATTTGTGA 59.598 41.667 0.00 0.00 0.00 3.58
1730 2122 4.441913 GGGGTGGATGCTTTATGATTTGTG 60.442 45.833 0.00 0.00 0.00 3.33
1731 2123 3.706086 GGGGTGGATGCTTTATGATTTGT 59.294 43.478 0.00 0.00 0.00 2.83
1732 2124 3.705579 TGGGGTGGATGCTTTATGATTTG 59.294 43.478 0.00 0.00 0.00 2.32
1733 2125 3.706086 GTGGGGTGGATGCTTTATGATTT 59.294 43.478 0.00 0.00 0.00 2.17
1734 2126 3.299503 GTGGGGTGGATGCTTTATGATT 58.700 45.455 0.00 0.00 0.00 2.57
1735 2127 2.424812 GGTGGGGTGGATGCTTTATGAT 60.425 50.000 0.00 0.00 0.00 2.45
1736 2128 1.064017 GGTGGGGTGGATGCTTTATGA 60.064 52.381 0.00 0.00 0.00 2.15
1737 2129 1.402787 GGTGGGGTGGATGCTTTATG 58.597 55.000 0.00 0.00 0.00 1.90
1738 2130 0.261696 GGGTGGGGTGGATGCTTTAT 59.738 55.000 0.00 0.00 0.00 1.40
1739 2131 1.694856 GGGTGGGGTGGATGCTTTA 59.305 57.895 0.00 0.00 0.00 1.85
1740 2132 2.445155 GGGTGGGGTGGATGCTTT 59.555 61.111 0.00 0.00 0.00 3.51
1741 2133 3.672503 GGGGTGGGGTGGATGCTT 61.673 66.667 0.00 0.00 0.00 3.91
1756 2148 2.159179 CCCTTAATTTCAGGTGGGGG 57.841 55.000 3.35 0.00 0.00 5.40
1757 2149 2.159179 CCCCTTAATTTCAGGTGGGG 57.841 55.000 0.00 0.00 46.89 4.96
1758 2150 2.159179 CCCCCTTAATTTCAGGTGGG 57.841 55.000 12.06 12.06 36.26 4.61
1774 2166 3.137360 ACAAAGCATCTAATCTCTCCCCC 59.863 47.826 0.00 0.00 0.00 5.40
1775 2167 4.133078 CACAAAGCATCTAATCTCTCCCC 58.867 47.826 0.00 0.00 0.00 4.81
1776 2168 5.028549 TCACAAAGCATCTAATCTCTCCC 57.971 43.478 0.00 0.00 0.00 4.30
1777 2169 7.066766 ACAAATCACAAAGCATCTAATCTCTCC 59.933 37.037 0.00 0.00 0.00 3.71
1778 2170 7.909121 CACAAATCACAAAGCATCTAATCTCTC 59.091 37.037 0.00 0.00 0.00 3.20
1779 2171 7.609146 TCACAAATCACAAAGCATCTAATCTCT 59.391 33.333 0.00 0.00 0.00 3.10
1780 2172 7.755591 TCACAAATCACAAAGCATCTAATCTC 58.244 34.615 0.00 0.00 0.00 2.75
1781 2173 7.692460 TCACAAATCACAAAGCATCTAATCT 57.308 32.000 0.00 0.00 0.00 2.40
1782 2174 8.804743 CATTCACAAATCACAAAGCATCTAATC 58.195 33.333 0.00 0.00 0.00 1.75
1783 2175 7.277098 GCATTCACAAATCACAAAGCATCTAAT 59.723 33.333 0.00 0.00 0.00 1.73
1784 2176 6.587226 GCATTCACAAATCACAAAGCATCTAA 59.413 34.615 0.00 0.00 0.00 2.10
1785 2177 6.094719 GCATTCACAAATCACAAAGCATCTA 58.905 36.000 0.00 0.00 0.00 1.98
1786 2178 4.927425 GCATTCACAAATCACAAAGCATCT 59.073 37.500 0.00 0.00 0.00 2.90
1787 2179 4.092383 GGCATTCACAAATCACAAAGCATC 59.908 41.667 0.00 0.00 0.00 3.91
1788 2180 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
1789 2181 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
1790 2182 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
1791 2183 4.977741 GTGGCATTCACAAATCACAAAG 57.022 40.909 0.00 0.00 45.39 2.77
1809 2201 1.679680 GCCCTGATGAATGACATGTGG 59.320 52.381 1.15 0.00 39.56 4.17
1812 2204 0.949397 CCGCCCTGATGAATGACATG 59.051 55.000 0.00 0.00 39.56 3.21
1819 2211 1.612146 TGAGACCCGCCCTGATGAA 60.612 57.895 0.00 0.00 0.00 2.57
1820 2212 2.038813 TGAGACCCGCCCTGATGA 59.961 61.111 0.00 0.00 0.00 2.92
1821 2213 2.187946 GTGAGACCCGCCCTGATG 59.812 66.667 0.00 0.00 0.00 3.07
1822 2214 3.083997 GGTGAGACCCGCCCTGAT 61.084 66.667 0.00 0.00 39.55 2.90
1823 2215 4.316823 AGGTGAGACCCGCCCTGA 62.317 66.667 0.00 0.00 46.65 3.86
1824 2216 4.087892 CAGGTGAGACCCGCCCTG 62.088 72.222 0.00 0.00 46.65 4.45
1825 2217 3.625632 ATCAGGTGAGACCCGCCCT 62.626 63.158 0.00 0.00 46.65 5.19
1826 2218 2.198304 AAATCAGGTGAGACCCGCCC 62.198 60.000 0.00 0.00 46.65 6.13
1827 2219 0.539986 TAAATCAGGTGAGACCCGCC 59.460 55.000 0.00 0.00 45.81 6.13
1828 2220 2.622064 ATAAATCAGGTGAGACCCGC 57.378 50.000 0.00 0.00 39.75 6.13
1829 2221 5.243954 TCTCATATAAATCAGGTGAGACCCG 59.756 44.000 0.00 0.00 40.06 5.28
1830 2222 6.672266 TCTCATATAAATCAGGTGAGACCC 57.328 41.667 0.00 0.00 40.06 4.46
1833 2225 6.268617 CCAGGTCTCATATAAATCAGGTGAGA 59.731 42.308 0.00 0.00 41.99 3.27
1834 2226 6.042552 ACCAGGTCTCATATAAATCAGGTGAG 59.957 42.308 0.00 0.00 38.07 3.51
1835 2227 5.905331 ACCAGGTCTCATATAAATCAGGTGA 59.095 40.000 0.00 0.00 0.00 4.02
1836 2228 6.042552 AGACCAGGTCTCATATAAATCAGGTG 59.957 42.308 17.31 0.00 38.71 4.00
1837 2229 6.146760 AGACCAGGTCTCATATAAATCAGGT 58.853 40.000 17.31 0.00 38.71 4.00
1838 2230 6.678568 AGACCAGGTCTCATATAAATCAGG 57.321 41.667 17.31 0.00 38.71 3.86
1871 2263 0.996462 CATAGCTCGCGACGGAAAAA 59.004 50.000 3.71 0.00 0.00 1.94
1872 2264 0.804544 CCATAGCTCGCGACGGAAAA 60.805 55.000 3.71 0.00 0.00 2.29
1873 2265 1.226859 CCATAGCTCGCGACGGAAA 60.227 57.895 3.71 0.00 0.00 3.13
1874 2266 2.411701 CCATAGCTCGCGACGGAA 59.588 61.111 3.71 0.00 0.00 4.30
1875 2267 3.592814 CCCATAGCTCGCGACGGA 61.593 66.667 3.71 0.00 0.00 4.69
1876 2268 2.421877 AATCCCATAGCTCGCGACGG 62.422 60.000 3.71 0.00 0.00 4.79
1877 2269 0.597637 AAATCCCATAGCTCGCGACG 60.598 55.000 3.71 2.50 0.00 5.12
1878 2270 1.261619 CAAAATCCCATAGCTCGCGAC 59.738 52.381 3.71 2.10 0.00 5.19
1879 2271 1.138069 TCAAAATCCCATAGCTCGCGA 59.862 47.619 9.26 9.26 0.00 5.87
1880 2272 1.581934 TCAAAATCCCATAGCTCGCG 58.418 50.000 0.00 0.00 0.00 5.87
1883 2275 5.047519 CCATCCAATCAAAATCCCATAGCTC 60.048 44.000 0.00 0.00 0.00 4.09
1964 2356 8.711457 CAAAATTTTGCTCCTACAAATTACAGG 58.289 33.333 17.48 0.00 39.18 4.00
2098 2492 4.814771 CGGACCAAGAAAAGTGTAGAAACT 59.185 41.667 0.00 0.00 0.00 2.66
2111 2505 0.684535 TCAGCATGTCGGACCAAGAA 59.315 50.000 5.55 0.00 37.40 2.52
2115 2509 0.605319 GGTTTCAGCATGTCGGACCA 60.605 55.000 5.55 0.00 37.40 4.02
2120 2514 0.592637 TTGCAGGTTTCAGCATGTCG 59.407 50.000 0.00 0.00 40.94 4.35
2127 2521 6.166279 TGACTAGTCTAATTGCAGGTTTCAG 58.834 40.000 23.01 0.00 0.00 3.02
2159 2554 9.933175 CGCGTATGTTATTAATGTATGTTACTC 57.067 33.333 0.00 0.00 0.00 2.59
2169 2564 9.563898 TCTAGGAATACGCGTATGTTATTAATG 57.436 33.333 30.82 14.92 0.00 1.90
2171 2566 8.786898 AGTCTAGGAATACGCGTATGTTATTAA 58.213 33.333 30.82 12.37 0.00 1.40
2174 2569 6.814506 AGTCTAGGAATACGCGTATGTTAT 57.185 37.500 30.82 16.31 0.00 1.89
2177 2572 5.704515 ACATAGTCTAGGAATACGCGTATGT 59.295 40.000 30.82 19.32 0.00 2.29
2178 2573 6.179504 ACATAGTCTAGGAATACGCGTATG 57.820 41.667 30.82 18.69 0.00 2.39
2179 2574 6.814506 AACATAGTCTAGGAATACGCGTAT 57.185 37.500 25.54 25.54 0.00 3.06
2180 2575 7.912056 ATAACATAGTCTAGGAATACGCGTA 57.088 36.000 22.94 22.94 0.00 4.42
2181 2576 6.814506 ATAACATAGTCTAGGAATACGCGT 57.185 37.500 19.17 19.17 0.00 6.01
2182 2577 7.695618 GGTAATAACATAGTCTAGGAATACGCG 59.304 40.741 3.53 3.53 0.00 6.01
2183 2578 8.738106 AGGTAATAACATAGTCTAGGAATACGC 58.262 37.037 0.00 0.00 0.00 4.42
2217 2612 9.476928 ACCACACTTACTTCTATGTTACTATCT 57.523 33.333 0.00 0.00 0.00 1.98
2220 2615 8.680903 GCTACCACACTTACTTCTATGTTACTA 58.319 37.037 0.00 0.00 0.00 1.82
2230 2625 3.334691 TGCATGCTACCACACTTACTTC 58.665 45.455 20.33 0.00 0.00 3.01
2231 2626 3.417069 TGCATGCTACCACACTTACTT 57.583 42.857 20.33 0.00 0.00 2.24
2232 2627 3.634397 ATGCATGCTACCACACTTACT 57.366 42.857 20.33 0.00 0.00 2.24
2233 2628 3.248602 GCTATGCATGCTACCACACTTAC 59.751 47.826 20.33 0.00 0.00 2.34
2234 2629 3.134623 AGCTATGCATGCTACCACACTTA 59.865 43.478 20.33 0.00 39.21 2.24
2235 2630 2.092753 AGCTATGCATGCTACCACACTT 60.093 45.455 20.33 0.00 39.21 3.16
2236 2631 1.487976 AGCTATGCATGCTACCACACT 59.512 47.619 20.33 4.38 39.21 3.55
2241 2636 4.843220 AAATGAAGCTATGCATGCTACC 57.157 40.909 20.33 15.40 40.22 3.18
2245 2640 7.965107 GGTAGTAATAAATGAAGCTATGCATGC 59.035 37.037 11.82 11.82 0.00 4.06
2252 2647 7.255730 GGACGGAGGTAGTAATAAATGAAGCTA 60.256 40.741 0.00 0.00 0.00 3.32
2253 2648 6.462628 GGACGGAGGTAGTAATAAATGAAGCT 60.463 42.308 0.00 0.00 0.00 3.74
2254 2649 5.695363 GGACGGAGGTAGTAATAAATGAAGC 59.305 44.000 0.00 0.00 0.00 3.86
2267 2662 3.573110 CCTATAAACCAGGACGGAGGTAG 59.427 52.174 0.00 0.00 37.07 3.18
2268 2663 3.052642 ACCTATAAACCAGGACGGAGGTA 60.053 47.826 0.00 0.00 35.66 3.08
2269 2664 2.292719 ACCTATAAACCAGGACGGAGGT 60.293 50.000 0.00 0.00 40.61 3.85
2270 2665 2.364647 GACCTATAAACCAGGACGGAGG 59.635 54.545 0.00 0.00 38.63 4.30
2271 2666 2.364647 GGACCTATAAACCAGGACGGAG 59.635 54.545 0.00 0.00 38.63 4.63
2272 2667 2.391678 GGACCTATAAACCAGGACGGA 58.608 52.381 0.00 0.00 38.63 4.69
2273 2668 1.415289 GGGACCTATAAACCAGGACGG 59.585 57.143 0.00 0.00 42.50 4.79
2274 2669 2.395619 AGGGACCTATAAACCAGGACG 58.604 52.381 0.00 0.00 36.61 4.79
2276 2671 4.604490 ACAAAAGGGACCTATAAACCAGGA 59.396 41.667 0.00 0.00 36.61 3.86
2277 2672 4.930696 ACAAAAGGGACCTATAAACCAGG 58.069 43.478 0.00 0.00 39.25 4.45
2278 2673 6.718294 ACTACAAAAGGGACCTATAAACCAG 58.282 40.000 0.00 0.00 0.00 4.00
2279 2674 6.707273 ACTACAAAAGGGACCTATAAACCA 57.293 37.500 0.00 0.00 0.00 3.67
2280 2675 7.449395 ACAAACTACAAAAGGGACCTATAAACC 59.551 37.037 0.00 0.00 0.00 3.27
2281 2676 8.294577 CACAAACTACAAAAGGGACCTATAAAC 58.705 37.037 0.00 0.00 0.00 2.01
2282 2677 7.040271 GCACAAACTACAAAAGGGACCTATAAA 60.040 37.037 0.00 0.00 0.00 1.40
2283 2678 6.431852 GCACAAACTACAAAAGGGACCTATAA 59.568 38.462 0.00 0.00 0.00 0.98
2284 2679 5.941647 GCACAAACTACAAAAGGGACCTATA 59.058 40.000 0.00 0.00 0.00 1.31
2286 2681 4.139038 GCACAAACTACAAAAGGGACCTA 58.861 43.478 0.00 0.00 0.00 3.08
2287 2682 2.956333 GCACAAACTACAAAAGGGACCT 59.044 45.455 0.00 0.00 0.00 3.85
2289 2684 2.691011 TGGCACAAACTACAAAAGGGAC 59.309 45.455 0.00 0.00 31.92 4.46
2304 2699 9.823647 TTAAATCTTTAGTCAAAATTTGGCACA 57.176 25.926 13.11 0.00 37.85 4.57
2329 2724 9.539825 TTGACATGCATTAACATTTTGTTAGTT 57.460 25.926 0.00 0.00 42.93 2.24
2330 2725 9.195411 CTTGACATGCATTAACATTTTGTTAGT 57.805 29.630 0.00 0.00 42.93 2.24
2331 2726 9.409312 TCTTGACATGCATTAACATTTTGTTAG 57.591 29.630 0.00 0.00 42.93 2.34
2332 2727 9.755804 TTCTTGACATGCATTAACATTTTGTTA 57.244 25.926 0.00 0.00 41.45 2.41
2333 2728 8.659925 TTCTTGACATGCATTAACATTTTGTT 57.340 26.923 0.00 0.00 43.88 2.83
2334 2729 8.659925 TTTCTTGACATGCATTAACATTTTGT 57.340 26.923 0.00 0.00 0.00 2.83
2335 2730 9.932699 TTTTTCTTGACATGCATTAACATTTTG 57.067 25.926 0.00 0.00 0.00 2.44
2346 2741 9.361315 CAATGAGATAATTTTTCTTGACATGCA 57.639 29.630 0.00 0.00 0.00 3.96
2347 2742 8.814235 CCAATGAGATAATTTTTCTTGACATGC 58.186 33.333 0.00 0.00 0.00 4.06
2353 2748 9.793252 ACGAATCCAATGAGATAATTTTTCTTG 57.207 29.630 0.00 0.00 0.00 3.02
2362 2757 9.389755 TGTTCAAATACGAATCCAATGAGATAA 57.610 29.630 0.00 0.00 0.00 1.75
2363 2758 8.956533 TGTTCAAATACGAATCCAATGAGATA 57.043 30.769 0.00 0.00 0.00 1.98
2364 2759 7.864108 TGTTCAAATACGAATCCAATGAGAT 57.136 32.000 0.00 0.00 0.00 2.75
2365 2760 7.864108 ATGTTCAAATACGAATCCAATGAGA 57.136 32.000 0.00 0.00 0.00 3.27
2366 2761 8.830580 ACTATGTTCAAATACGAATCCAATGAG 58.169 33.333 0.00 0.00 0.00 2.90
2367 2762 8.731275 ACTATGTTCAAATACGAATCCAATGA 57.269 30.769 0.00 0.00 0.00 2.57
2368 2763 9.787532 AAACTATGTTCAAATACGAATCCAATG 57.212 29.630 0.00 0.00 0.00 2.82
2370 2765 9.834628 GAAAACTATGTTCAAATACGAATCCAA 57.165 29.630 0.00 0.00 0.00 3.53
2371 2766 9.004717 TGAAAACTATGTTCAAATACGAATCCA 57.995 29.630 0.00 0.00 32.13 3.41
2372 2767 9.834628 TTGAAAACTATGTTCAAATACGAATCC 57.165 29.630 0.00 0.00 40.96 3.01
2395 2790 9.149225 GCATGTCACCAAACATTATATTTTTGA 57.851 29.630 0.00 0.00 37.78 2.69
2396 2791 8.933807 TGCATGTCACCAAACATTATATTTTTG 58.066 29.630 0.00 0.00 37.78 2.44
2397 2792 9.669887 ATGCATGTCACCAAACATTATATTTTT 57.330 25.926 0.00 0.00 37.78 1.94
2398 2793 9.100554 CATGCATGTCACCAAACATTATATTTT 57.899 29.630 18.91 0.00 37.78 1.82
2399 2794 8.476447 TCATGCATGTCACCAAACATTATATTT 58.524 29.630 25.43 0.00 37.78 1.40
2400 2795 8.009622 TCATGCATGTCACCAAACATTATATT 57.990 30.769 25.43 0.00 37.78 1.28
2401 2796 7.585579 TCATGCATGTCACCAAACATTATAT 57.414 32.000 25.43 0.00 37.78 0.86
2402 2797 7.094032 TGTTCATGCATGTCACCAAACATTATA 60.094 33.333 25.43 3.57 37.78 0.98
2403 2798 5.918426 TCATGCATGTCACCAAACATTAT 57.082 34.783 25.43 0.00 37.78 1.28
2404 2799 5.010415 TGTTCATGCATGTCACCAAACATTA 59.990 36.000 25.43 4.23 37.78 1.90
2405 2800 4.202233 TGTTCATGCATGTCACCAAACATT 60.202 37.500 25.43 0.00 37.78 2.71
2406 2801 3.321396 TGTTCATGCATGTCACCAAACAT 59.679 39.130 25.43 0.00 40.49 2.71
2407 2802 2.692041 TGTTCATGCATGTCACCAAACA 59.308 40.909 25.43 22.12 0.00 2.83
2408 2803 3.367992 TGTTCATGCATGTCACCAAAC 57.632 42.857 25.43 20.02 0.00 2.93
2409 2804 4.603989 AATGTTCATGCATGTCACCAAA 57.396 36.364 25.43 9.24 0.00 3.28
2410 2805 4.603989 AAATGTTCATGCATGTCACCAA 57.396 36.364 25.43 9.97 0.00 3.67
2411 2806 4.202233 ACAAAATGTTCATGCATGTCACCA 60.202 37.500 25.43 17.03 0.00 4.17
2412 2807 4.309099 ACAAAATGTTCATGCATGTCACC 58.691 39.130 25.43 12.41 0.00 4.02
2413 2808 5.910637 AACAAAATGTTCATGCATGTCAC 57.089 34.783 25.43 21.75 35.27 3.67
2414 2809 6.747125 ACTAACAAAATGTTCATGCATGTCA 58.253 32.000 25.43 23.31 40.22 3.58
2415 2810 7.642071 AACTAACAAAATGTTCATGCATGTC 57.358 32.000 25.43 19.05 40.22 3.06
2416 2811 9.539825 TTAAACTAACAAAATGTTCATGCATGT 57.460 25.926 25.43 4.01 40.22 3.21
2419 2814 9.979578 AGATTAAACTAACAAAATGTTCATGCA 57.020 25.926 0.00 0.00 40.22 3.96
2436 2831 8.592809 TGCCAAATTTTGACCATAGATTAAACT 58.407 29.630 10.72 0.00 0.00 2.66
2437 2832 8.655970 GTGCCAAATTTTGACCATAGATTAAAC 58.344 33.333 10.72 0.00 0.00 2.01
2438 2833 7.543868 CGTGCCAAATTTTGACCATAGATTAAA 59.456 33.333 10.72 0.00 0.00 1.52
2439 2834 7.032580 CGTGCCAAATTTTGACCATAGATTAA 58.967 34.615 10.72 0.00 0.00 1.40
2440 2835 6.375736 TCGTGCCAAATTTTGACCATAGATTA 59.624 34.615 10.72 0.00 0.00 1.75
2441 2836 5.184864 TCGTGCCAAATTTTGACCATAGATT 59.815 36.000 10.72 0.00 0.00 2.40
2442 2837 4.704540 TCGTGCCAAATTTTGACCATAGAT 59.295 37.500 10.72 0.00 0.00 1.98
2443 2838 4.075682 TCGTGCCAAATTTTGACCATAGA 58.924 39.130 10.72 8.13 0.00 1.98
2444 2839 4.433186 TCGTGCCAAATTTTGACCATAG 57.567 40.909 10.72 6.37 0.00 2.23
2445 2840 4.855715 TTCGTGCCAAATTTTGACCATA 57.144 36.364 10.72 0.00 0.00 2.74
2446 2841 3.742433 TTCGTGCCAAATTTTGACCAT 57.258 38.095 10.72 0.00 0.00 3.55
2447 2842 3.526931 TTTCGTGCCAAATTTTGACCA 57.473 38.095 10.72 4.80 0.00 4.02
2448 2843 4.985409 TGTATTTCGTGCCAAATTTTGACC 59.015 37.500 10.72 2.35 0.00 4.02
2449 2844 6.517914 TTGTATTTCGTGCCAAATTTTGAC 57.482 33.333 10.72 0.00 0.00 3.18
2450 2845 6.146837 CCATTGTATTTCGTGCCAAATTTTGA 59.853 34.615 10.72 0.00 0.00 2.69
2451 2846 6.305639 CCATTGTATTTCGTGCCAAATTTTG 58.694 36.000 1.99 1.99 0.00 2.44
2452 2847 5.411053 CCCATTGTATTTCGTGCCAAATTTT 59.589 36.000 0.00 0.00 0.00 1.82
2453 2848 4.934602 CCCATTGTATTTCGTGCCAAATTT 59.065 37.500 0.00 0.00 0.00 1.82
2454 2849 4.502962 CCCATTGTATTTCGTGCCAAATT 58.497 39.130 0.00 0.00 0.00 1.82
2455 2850 3.118811 CCCCATTGTATTTCGTGCCAAAT 60.119 43.478 0.00 0.00 0.00 2.32
2456 2851 2.232452 CCCCATTGTATTTCGTGCCAAA 59.768 45.455 0.00 0.00 0.00 3.28
2457 2852 1.821753 CCCCATTGTATTTCGTGCCAA 59.178 47.619 0.00 0.00 0.00 4.52
2458 2853 1.004862 TCCCCATTGTATTTCGTGCCA 59.995 47.619 0.00 0.00 0.00 4.92
2459 2854 1.404035 GTCCCCATTGTATTTCGTGCC 59.596 52.381 0.00 0.00 0.00 5.01
2460 2855 1.404035 GGTCCCCATTGTATTTCGTGC 59.596 52.381 0.00 0.00 0.00 5.34
2461 2856 2.717390 TGGTCCCCATTGTATTTCGTG 58.283 47.619 0.00 0.00 0.00 4.35
2462 2857 3.443145 TTGGTCCCCATTGTATTTCGT 57.557 42.857 0.00 0.00 31.53 3.85
2463 2858 6.458232 TTTATTGGTCCCCATTGTATTTCG 57.542 37.500 0.00 0.00 31.53 3.46
2464 2859 7.441836 GGATTTATTGGTCCCCATTGTATTTC 58.558 38.462 0.00 0.00 31.53 2.17
2465 2860 6.041523 CGGATTTATTGGTCCCCATTGTATTT 59.958 38.462 0.00 0.00 31.53 1.40
2466 2861 5.538433 CGGATTTATTGGTCCCCATTGTATT 59.462 40.000 0.00 0.00 31.53 1.89
2467 2862 5.076873 CGGATTTATTGGTCCCCATTGTAT 58.923 41.667 0.00 0.00 31.53 2.29
2468 2863 4.465886 CGGATTTATTGGTCCCCATTGTA 58.534 43.478 0.00 0.00 31.53 2.41
2469 2864 3.295973 CGGATTTATTGGTCCCCATTGT 58.704 45.455 0.00 0.00 31.53 2.71
2470 2865 2.627699 CCGGATTTATTGGTCCCCATTG 59.372 50.000 0.00 0.00 31.53 2.82
2471 2866 2.516277 TCCGGATTTATTGGTCCCCATT 59.484 45.455 0.00 0.00 31.53 3.16
2472 2867 2.140224 TCCGGATTTATTGGTCCCCAT 58.860 47.619 0.00 0.00 31.53 4.00
2473 2868 1.213430 GTCCGGATTTATTGGTCCCCA 59.787 52.381 7.81 0.00 0.00 4.96
2474 2869 1.812708 CGTCCGGATTTATTGGTCCCC 60.813 57.143 7.81 0.00 0.00 4.81
2475 2870 1.589803 CGTCCGGATTTATTGGTCCC 58.410 55.000 7.81 0.00 0.00 4.46
2476 2871 1.139455 TCCGTCCGGATTTATTGGTCC 59.861 52.381 7.81 0.00 39.76 4.46
2477 2872 2.480845 CTCCGTCCGGATTTATTGGTC 58.519 52.381 7.81 0.00 44.24 4.02
2478 2873 2.614829 CTCCGTCCGGATTTATTGGT 57.385 50.000 7.81 0.00 44.24 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.