Multiple sequence alignment - TraesCS2A01G264100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G264100 chr2A 100.000 6513 0 0 1 6513 419026563 419033075 0.000000e+00 12028.0
1 TraesCS2A01G264100 chr2A 84.661 339 23 9 4061 4394 522519019 522518705 1.760000e-80 311.0
2 TraesCS2A01G264100 chr2A 83.918 342 27 11 4061 4398 235331122 235331439 1.060000e-77 302.0
3 TraesCS2A01G264100 chr2A 82.808 349 31 13 4061 4405 486504317 486504640 1.070000e-72 285.0
4 TraesCS2A01G264100 chr2A 82.787 122 20 1 419 540 725554542 725554422 2.480000e-19 108.0
5 TraesCS2A01G264100 chr2A 100.000 29 0 0 5349 5377 419031747 419031775 3.000000e-03 54.7
6 TraesCS2A01G264100 chr2A 100.000 29 0 0 5185 5213 419031911 419031939 3.000000e-03 54.7
7 TraesCS2A01G264100 chr2A 100.000 28 0 0 5350 5377 419031793 419031820 1.200000e-02 52.8
8 TraesCS2A01G264100 chr2A 100.000 28 0 0 5231 5258 419031912 419031939 1.200000e-02 52.8
9 TraesCS2A01G264100 chr2B 94.900 1745 46 13 1001 2744 384039736 384038034 0.000000e+00 2689.0
10 TraesCS2A01G264100 chr2B 92.197 1602 48 19 3636 5218 384036947 384035404 0.000000e+00 2194.0
11 TraesCS2A01G264100 chr2B 97.521 726 14 1 2842 3563 384037671 384036946 0.000000e+00 1238.0
12 TraesCS2A01G264100 chr2B 91.615 811 55 4 5713 6513 760109736 760110543 0.000000e+00 1109.0
13 TraesCS2A01G264100 chr2B 87.653 818 87 8 5707 6513 138534892 138534078 0.000000e+00 939.0
14 TraesCS2A01G264100 chr2B 92.754 414 18 4 560 973 384043779 384043378 7.270000e-164 588.0
15 TraesCS2A01G264100 chr2B 91.798 317 12 5 5374 5690 384035402 384035100 4.670000e-116 429.0
16 TraesCS2A01G264100 chr2B 84.548 343 26 7 4060 4398 201466183 201465864 1.360000e-81 315.0
17 TraesCS2A01G264100 chr2B 83.465 254 14 9 1 245 384045366 384045132 1.840000e-50 211.0
18 TraesCS2A01G264100 chr2B 82.667 150 23 3 393 541 764873793 764873940 5.300000e-26 130.0
19 TraesCS2A01G264100 chr2B 90.110 91 4 3 3552 3638 675337145 675337234 5.340000e-21 113.0
20 TraesCS2A01G264100 chr2B 87.755 98 8 2 3553 3646 6027274 6027177 1.920000e-20 111.0
21 TraesCS2A01G264100 chr2D 94.514 1604 43 16 3636 5218 316123769 316122190 0.000000e+00 2433.0
22 TraesCS2A01G264100 chr2D 88.812 1877 99 46 1 1840 316127622 316125820 0.000000e+00 2200.0
23 TraesCS2A01G264100 chr2D 95.341 923 33 5 1823 2744 316125810 316124897 0.000000e+00 1458.0
24 TraesCS2A01G264100 chr2D 98.087 732 14 0 2832 3563 316124499 316123768 0.000000e+00 1275.0
25 TraesCS2A01G264100 chr2D 92.848 825 47 3 5701 6513 82667255 82666431 0.000000e+00 1186.0
26 TraesCS2A01G264100 chr2D 91.477 352 8 4 5349 5690 316122223 316121884 1.280000e-126 464.0
27 TraesCS2A01G264100 chr2D 85.207 338 23 6 4061 4394 386504205 386503891 8.150000e-84 322.0
28 TraesCS2A01G264100 chr2D 84.840 343 24 11 4061 4398 239711352 239711033 2.930000e-83 320.0
29 TraesCS2A01G264100 chr2D 91.860 86 3 3 3555 3637 407254405 407254489 4.130000e-22 117.0
30 TraesCS2A01G264100 chr2D 92.593 81 2 2 3561 3641 621608983 621609059 5.340000e-21 113.0
31 TraesCS2A01G264100 chr2D 80.328 122 18 4 424 541 418766360 418766479 3.240000e-13 87.9
32 TraesCS2A01G264100 chr2D 87.097 62 8 0 481 542 178617500 178617561 3.260000e-08 71.3
33 TraesCS2A01G264100 chr2D 86.441 59 8 0 2324 2382 298290238 298290296 1.520000e-06 65.8
34 TraesCS2A01G264100 chr2D 100.000 28 0 0 5231 5258 316122222 316122195 1.200000e-02 52.8
35 TraesCS2A01G264100 chr5A 93.317 823 43 3 5701 6511 666343584 666344406 0.000000e+00 1205.0
36 TraesCS2A01G264100 chr5A 92.727 165 11 1 4236 4399 141878705 141878869 3.040000e-58 237.0
37 TraesCS2A01G264100 chr5A 81.818 143 23 2 402 541 700311842 700311700 4.130000e-22 117.0
38 TraesCS2A01G264100 chr5A 80.451 133 20 5 412 541 613573481 613573610 5.380000e-16 97.1
39 TraesCS2A01G264100 chr5B 91.515 825 55 5 5701 6513 103331844 103332665 0.000000e+00 1122.0
40 TraesCS2A01G264100 chr5B 85.380 342 22 7 4061 4398 394973746 394973429 4.870000e-86 329.0
41 TraesCS2A01G264100 chr5B 92.857 84 3 3 3556 3637 462131189 462131271 1.150000e-22 119.0
42 TraesCS2A01G264100 chr5B 78.571 140 29 1 402 541 549671743 549671881 2.500000e-14 91.6
43 TraesCS2A01G264100 chr5B 90.000 60 5 1 2324 2382 462745552 462745493 7.000000e-10 76.8
44 TraesCS2A01G264100 chr5B 87.879 66 6 2 2324 2389 462745656 462745593 7.000000e-10 76.8
45 TraesCS2A01G264100 chr3B 89.841 817 69 5 5707 6513 814390471 814389659 0.000000e+00 1037.0
46 TraesCS2A01G264100 chr3B 87.638 817 89 4 5707 6513 672534248 672533434 0.000000e+00 939.0
47 TraesCS2A01G264100 chr3B 83.217 143 16 6 402 541 593937488 593937625 2.470000e-24 124.0
48 TraesCS2A01G264100 chr4A 92.493 706 50 2 5742 6446 28561421 28560718 0.000000e+00 1007.0
49 TraesCS2A01G264100 chr4A 86.246 349 45 3 6168 6513 691269586 691269238 6.170000e-100 375.0
50 TraesCS2A01G264100 chr4A 84.795 342 25 9 4061 4398 458238309 458238627 1.050000e-82 318.0
51 TraesCS2A01G264100 chr4A 78.723 141 24 5 401 541 183617236 183617370 8.990000e-14 89.8
52 TraesCS2A01G264100 chr4A 89.831 59 6 0 2324 2382 185435368 185435426 7.000000e-10 76.8
53 TraesCS2A01G264100 chr4D 90.182 713 68 2 5802 6513 478268564 478269275 0.000000e+00 928.0
54 TraesCS2A01G264100 chr4D 85.337 341 21 13 4061 4395 479956937 479957254 6.300000e-85 326.0
55 TraesCS2A01G264100 chr4D 80.714 140 27 0 402 541 425705159 425705020 6.900000e-20 110.0
56 TraesCS2A01G264100 chr4D 80.556 144 20 6 402 541 44636735 44636874 3.210000e-18 104.0
57 TraesCS2A01G264100 chr4D 92.000 50 4 0 485 534 82573614 82573663 3.260000e-08 71.3
58 TraesCS2A01G264100 chr4D 90.000 50 5 0 2332 2381 177475788 177475739 1.520000e-06 65.8
59 TraesCS2A01G264100 chr4B 88.359 713 72 4 5802 6513 604880930 604881632 0.000000e+00 846.0
60 TraesCS2A01G264100 chr4B 89.831 59 6 0 2324 2382 193676416 193676474 7.000000e-10 76.8
61 TraesCS2A01G264100 chr4B 86.567 67 7 2 2324 2390 659159244 659159180 9.060000e-09 73.1
62 TraesCS2A01G264100 chr4B 89.362 47 5 0 547 593 413876610 413876564 7.050000e-05 60.2
63 TraesCS2A01G264100 chr3A 89.869 533 47 3 5982 6513 453652744 453652218 0.000000e+00 678.0
64 TraesCS2A01G264100 chr3A 82.584 356 60 2 5843 6197 36947404 36947758 4.900000e-81 313.0
65 TraesCS2A01G264100 chr3A 89.516 248 16 2 5707 5945 453652991 453652745 8.200000e-79 305.0
66 TraesCS2A01G264100 chr3A 94.231 52 3 0 6027 6078 114542050 114541999 5.410000e-11 80.5
67 TraesCS2A01G264100 chr7D 86.765 476 50 7 6039 6513 156033196 156033659 9.680000e-143 518.0
68 TraesCS2A01G264100 chr7D 89.542 306 26 3 5741 6046 156031219 156031518 3.680000e-102 383.0
69 TraesCS2A01G264100 chr1A 87.135 342 23 10 4061 4398 292774086 292773762 1.030000e-97 368.0
70 TraesCS2A01G264100 chr1A 88.136 59 5 2 2332 2390 350014361 350014305 1.170000e-07 69.4
71 TraesCS2A01G264100 chr5D 84.884 344 23 10 4060 4398 256469525 256469844 2.930000e-83 320.0
72 TraesCS2A01G264100 chr5D 80.142 141 26 2 402 541 316112133 316111994 3.210000e-18 104.0
73 TraesCS2A01G264100 chr5D 83.529 85 14 0 457 541 264373835 264373919 5.410000e-11 80.5
74 TraesCS2A01G264100 chr5D 88.136 59 7 0 2324 2382 162425242 162425300 3.260000e-08 71.3
75 TraesCS2A01G264100 chr5D 89.362 47 5 0 2335 2381 336451977 336451931 7.050000e-05 60.2
76 TraesCS2A01G264100 chr7B 84.503 342 26 10 4061 4398 446166208 446166526 4.900000e-81 313.0
77 TraesCS2A01G264100 chr7B 82.114 369 33 21 4060 4398 511302076 511301711 1.070000e-72 285.0
78 TraesCS2A01G264100 chr1D 88.571 175 15 4 4061 4231 225405049 225405222 2.380000e-49 207.0
79 TraesCS2A01G264100 chr1D 81.690 142 21 4 403 541 483526073 483526212 5.340000e-21 113.0
80 TraesCS2A01G264100 chr1D 86.957 69 7 2 2324 2392 438324180 438324114 7.000000e-10 76.8
81 TraesCS2A01G264100 chr1D 90.741 54 5 0 2324 2377 211684874 211684927 9.060000e-09 73.1
82 TraesCS2A01G264100 chr1D 90.909 55 4 1 2324 2377 221932834 221932888 9.060000e-09 73.1
83 TraesCS2A01G264100 chr1D 86.567 67 7 2 2324 2390 277359787 277359723 9.060000e-09 73.1
84 TraesCS2A01G264100 chr7A 79.535 215 32 9 401 606 182020999 182020788 6.810000e-30 143.0
85 TraesCS2A01G264100 chrUn 91.860 86 6 1 3552 3637 110687494 110687410 1.150000e-22 119.0
86 TraesCS2A01G264100 chr6D 91.011 89 2 4 3555 3637 363881652 363881740 1.480000e-21 115.0
87 TraesCS2A01G264100 chr6B 90.110 91 3 2 3554 3638 713473818 713473728 5.340000e-21 113.0
88 TraesCS2A01G264100 chr6B 83.838 99 14 2 433 531 30554093 30554189 6.950000e-15 93.5
89 TraesCS2A01G264100 chr1B 88.421 95 10 1 3551 3645 584135346 584135439 5.340000e-21 113.0
90 TraesCS2A01G264100 chr1B 85.135 74 8 3 2324 2396 402109901 402109830 9.060000e-09 73.1
91 TraesCS2A01G264100 chr6A 82.203 118 20 1 424 541 32228154 32228038 4.160000e-17 100.0
92 TraesCS2A01G264100 chr6A 90.909 55 4 1 2324 2377 481235309 481235363 9.060000e-09 73.1
93 TraesCS2A01G264100 chr3D 81.905 105 15 3 437 541 108420024 108419924 1.160000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G264100 chr2A 419026563 419033075 6512 False 2448.600000 12028 100.000000 1 6513 5 chr2A.!!$F3 6512
1 TraesCS2A01G264100 chr2B 384035100 384045366 10266 True 1224.833333 2689 92.105833 1 5690 6 chr2B.!!$R4 5689
2 TraesCS2A01G264100 chr2B 760109736 760110543 807 False 1109.000000 1109 91.615000 5713 6513 1 chr2B.!!$F2 800
3 TraesCS2A01G264100 chr2B 138534078 138534892 814 True 939.000000 939 87.653000 5707 6513 1 chr2B.!!$R2 806
4 TraesCS2A01G264100 chr2D 316121884 316127622 5738 True 1313.800000 2433 94.705167 1 5690 6 chr2D.!!$R4 5689
5 TraesCS2A01G264100 chr2D 82666431 82667255 824 True 1186.000000 1186 92.848000 5701 6513 1 chr2D.!!$R1 812
6 TraesCS2A01G264100 chr5A 666343584 666344406 822 False 1205.000000 1205 93.317000 5701 6511 1 chr5A.!!$F3 810
7 TraesCS2A01G264100 chr5B 103331844 103332665 821 False 1122.000000 1122 91.515000 5701 6513 1 chr5B.!!$F1 812
8 TraesCS2A01G264100 chr3B 814389659 814390471 812 True 1037.000000 1037 89.841000 5707 6513 1 chr3B.!!$R2 806
9 TraesCS2A01G264100 chr3B 672533434 672534248 814 True 939.000000 939 87.638000 5707 6513 1 chr3B.!!$R1 806
10 TraesCS2A01G264100 chr4A 28560718 28561421 703 True 1007.000000 1007 92.493000 5742 6446 1 chr4A.!!$R1 704
11 TraesCS2A01G264100 chr4D 478268564 478269275 711 False 928.000000 928 90.182000 5802 6513 1 chr4D.!!$F3 711
12 TraesCS2A01G264100 chr4B 604880930 604881632 702 False 846.000000 846 88.359000 5802 6513 1 chr4B.!!$F2 711
13 TraesCS2A01G264100 chr3A 453652218 453652991 773 True 491.500000 678 89.692500 5707 6513 2 chr3A.!!$R2 806
14 TraesCS2A01G264100 chr7D 156031219 156033659 2440 False 450.500000 518 88.153500 5741 6513 2 chr7D.!!$F1 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
513 1578 0.243907 CCTTCGAGAAACTGAGCCGA 59.756 55.000 0.00 0.00 0.00 5.54 F
963 2048 1.376037 CACCCGCTTCTTCCTCACC 60.376 63.158 0.00 0.00 0.00 4.02 F
2810 7638 0.461693 GTCCTCACATGCTCAGAGGC 60.462 60.000 15.49 9.49 46.71 4.70 F
4133 9199 0.097674 CGTTGGCTAGTGCATGAAGC 59.902 55.000 0.00 8.84 45.96 3.86 F
4245 9311 0.849094 ATAGGGGCCCTTTGTCCACA 60.849 55.000 33.98 10.72 34.61 4.17 F
5271 10348 0.033894 ATGGATGCATGGTGTGAGCA 60.034 50.000 2.46 0.00 43.14 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1936 6668 0.541998 TGCGAGGTGGGAAAGAGAGA 60.542 55.0 0.00 0.00 0.00 3.10 R
2814 7642 0.396556 ATCTTGGGCTCATGCATGCA 60.397 50.0 25.04 25.04 41.91 3.96 R
4226 9292 0.849094 TGTGGACAAAGGGCCCCTAT 60.849 55.0 21.43 1.24 31.13 2.57 R
5252 10329 0.033894 TGCTCACACCATGCATCCAT 60.034 50.0 0.00 0.00 0.00 3.41 R
5338 10415 0.038599 TGCTCACACCTGCATCCATT 59.961 50.0 0.00 0.00 33.94 3.16 R
6313 13087 0.179004 AGAAACCACGTGCCCAATGA 60.179 50.0 10.91 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.951747 AGGGAAAGCTTAAGCATTTGACATA 59.048 36.000 28.39 0.00 45.16 2.29
70 71 9.398538 AGTTAAACTCCAAATGTTACACTTACA 57.601 29.630 0.00 0.00 0.00 2.41
71 72 9.442033 GTTAAACTCCAAATGTTACACTTACAC 57.558 33.333 0.00 0.00 0.00 2.90
74 75 8.967664 AACTCCAAATGTTACACTTACACTTA 57.032 30.769 0.00 0.00 0.00 2.24
76 77 9.569122 ACTCCAAATGTTACACTTACACTTAAT 57.431 29.630 0.00 0.00 0.00 1.40
327 1014 7.865707 AGTCATATTTTTGTTCAGTGACACTC 58.134 34.615 4.74 0.00 37.53 3.51
344 1031 8.677300 AGTGACACTCGCATCATTTTATTTTAT 58.323 29.630 1.07 0.00 0.00 1.40
378 1071 5.010282 TGACACTAGCATCACTTGAGTCTA 58.990 41.667 0.00 0.00 40.49 2.59
386 1079 6.705302 AGCATCACTTGAGTCTAAATTCAGA 58.295 36.000 0.00 0.00 0.00 3.27
447 1140 6.073385 GCAAGCGCTCATATATACATGCATAT 60.073 38.462 12.06 3.91 34.30 1.78
449 1142 9.148104 CAAGCGCTCATATATACATGCATATAT 57.852 33.333 12.06 11.29 35.40 0.86
472 1169 5.017294 TCATCCATATGAACGCACTTACA 57.983 39.130 3.65 0.00 39.20 2.41
476 1173 3.241963 CCATATGAACGCACTTACACACG 60.242 47.826 3.65 0.00 0.00 4.49
479 1176 1.202325 TGAACGCACTTACACACGTCT 60.202 47.619 0.00 0.00 37.87 4.18
481 1178 2.780065 ACGCACTTACACACGTCTTA 57.220 45.000 0.00 0.00 32.37 2.10
497 1195 4.427312 CGTCTTACGCCTATAAACACCTT 58.573 43.478 0.00 0.00 33.65 3.50
498 1196 4.501921 CGTCTTACGCCTATAAACACCTTC 59.498 45.833 0.00 0.00 33.65 3.46
503 1568 3.194116 ACGCCTATAAACACCTTCGAGAA 59.806 43.478 0.00 0.00 0.00 2.87
513 1578 0.243907 CCTTCGAGAAACTGAGCCGA 59.756 55.000 0.00 0.00 0.00 5.54
542 1607 7.751047 TCATCTTAAGATTTTACGAAGTCGG 57.249 36.000 15.49 0.24 36.76 4.79
543 1608 7.318141 TCATCTTAAGATTTTACGAAGTCGGT 58.682 34.615 15.49 0.00 36.76 4.69
544 1609 8.461222 TCATCTTAAGATTTTACGAAGTCGGTA 58.539 33.333 15.49 0.00 36.76 4.02
545 1610 8.744011 CATCTTAAGATTTTACGAAGTCGGTAG 58.256 37.037 15.49 0.00 36.76 3.18
546 1611 7.253422 TCTTAAGATTTTACGAAGTCGGTAGG 58.747 38.462 0.00 0.00 43.93 3.18
558 1643 2.889678 AGTCGGTAGGAACGTCTTCTTT 59.110 45.455 0.00 0.00 0.00 2.52
568 1653 5.756833 AGGAACGTCTTCTTTCATTAAACGT 59.243 36.000 0.00 0.00 0.00 3.99
570 1655 4.769215 ACGTCTTCTTTCATTAAACGTGC 58.231 39.130 0.00 0.00 0.00 5.34
593 1678 8.930982 GTGCATCGTCGAAAATACTAAAATAAC 58.069 33.333 0.00 0.00 0.00 1.89
620 1705 8.394971 TCAGGATAAATAAATGCGAATCATGT 57.605 30.769 0.00 0.00 35.13 3.21
673 1758 9.103861 CTCCATCAGGAAAGTAGTATTTTTCTC 57.896 37.037 0.00 0.00 45.19 2.87
705 1790 7.631717 AAATATTCTCTTCCTTGCCTAACAC 57.368 36.000 0.00 0.00 0.00 3.32
706 1791 4.917906 ATTCTCTTCCTTGCCTAACACT 57.082 40.909 0.00 0.00 0.00 3.55
707 1792 7.676683 ATATTCTCTTCCTTGCCTAACACTA 57.323 36.000 0.00 0.00 0.00 2.74
708 1793 5.818678 TTCTCTTCCTTGCCTAACACTAA 57.181 39.130 0.00 0.00 0.00 2.24
709 1794 5.148651 TCTCTTCCTTGCCTAACACTAAC 57.851 43.478 0.00 0.00 0.00 2.34
710 1795 4.591498 TCTCTTCCTTGCCTAACACTAACA 59.409 41.667 0.00 0.00 0.00 2.41
813 1898 2.614969 TGGGCTCCCATTGGCTCT 60.615 61.111 2.93 0.00 41.89 4.09
829 1914 2.147150 GCTCTTCTTTCCACCTCACAC 58.853 52.381 0.00 0.00 0.00 3.82
872 1957 1.908793 CCCCACTCACAGGTCGACT 60.909 63.158 16.46 0.00 0.00 4.18
961 2046 1.841556 ACCACCCGCTTCTTCCTCA 60.842 57.895 0.00 0.00 0.00 3.86
963 2048 1.376037 CACCCGCTTCTTCCTCACC 60.376 63.158 0.00 0.00 0.00 4.02
1036 5735 2.355126 CCGCCATCTCATCGACGG 60.355 66.667 0.00 0.00 0.00 4.79
1053 5752 2.509561 GCTCGAAGCCGAACCCTC 60.510 66.667 0.00 0.00 45.04 4.30
1065 5764 1.463444 CGAACCCTCGGCAAGTAAAAG 59.537 52.381 0.00 0.00 41.57 2.27
1082 5781 7.600231 AGTAAAAGATACCTAACCCTAGCTC 57.400 40.000 0.00 0.00 0.00 4.09
1299 5998 2.562912 GTCGCCGTCAACGTCCTA 59.437 61.111 1.48 0.00 37.74 2.94
1912 6644 6.663953 TGAGTGTAGTCTTAAGTTGCCTCTAT 59.336 38.462 1.63 0.00 0.00 1.98
1936 6668 5.663106 TGAGGAGACAGAATATACAGGCTTT 59.337 40.000 0.00 0.00 0.00 3.51
1988 6720 5.141182 TGGCTTGTTGGTTTAGGAACATAA 58.859 37.500 0.00 0.00 37.51 1.90
2005 6737 7.285401 AGGAACATAAAAACTTGCTCTCTTTCA 59.715 33.333 0.00 0.00 0.00 2.69
2154 6886 4.340381 GGGCTTCATGCAATCTTATTGTCT 59.660 41.667 0.00 0.00 45.15 3.41
2203 6935 8.745590 TGGCTTTCTAGTTTTGTAAACTTTCTT 58.254 29.630 9.79 0.00 0.00 2.52
2339 7071 4.995058 TTGGTCCGCCCCTTCCCT 62.995 66.667 0.00 0.00 0.00 4.20
2345 7077 3.537874 CGCCCCTTCCCTAGACCG 61.538 72.222 0.00 0.00 0.00 4.79
2377 7109 1.377725 GCTACATGCACTGGGCTGT 60.378 57.895 2.50 7.78 45.15 4.40
2394 7126 8.554011 ACTGGGCTGTCCTTATTATTTTTACTA 58.446 33.333 0.00 0.00 36.20 1.82
2446 7180 6.259387 TCAGAGTGTTTCATGCATATGCTTAG 59.741 38.462 27.13 16.69 42.66 2.18
2450 7184 5.740569 GTGTTTCATGCATATGCTTAGTGTG 59.259 40.000 27.13 15.47 42.66 3.82
2451 7185 5.647225 TGTTTCATGCATATGCTTAGTGTGA 59.353 36.000 27.13 17.17 42.66 3.58
2452 7186 6.319405 TGTTTCATGCATATGCTTAGTGTGAT 59.681 34.615 27.13 8.06 42.66 3.06
2453 7187 7.498570 TGTTTCATGCATATGCTTAGTGTGATA 59.501 33.333 27.13 13.34 42.66 2.15
2454 7188 7.662604 TTCATGCATATGCTTAGTGTGATAG 57.337 36.000 27.13 7.23 42.66 2.08
2455 7189 6.762333 TCATGCATATGCTTAGTGTGATAGT 58.238 36.000 27.13 0.00 42.66 2.12
2583 7318 6.458210 AGGTGTGGCTTCATAATTTTCAAAG 58.542 36.000 0.00 0.00 0.00 2.77
2611 7346 3.554960 GGTTCTTGAAAATTGTGGGAGGC 60.555 47.826 0.00 0.00 0.00 4.70
2759 7587 7.289310 TCTTGTATTCTTATCCCATGCAATCA 58.711 34.615 0.00 0.00 0.00 2.57
2760 7588 7.946219 TCTTGTATTCTTATCCCATGCAATCAT 59.054 33.333 0.00 0.00 0.00 2.45
2761 7589 9.234827 CTTGTATTCTTATCCCATGCAATCATA 57.765 33.333 0.00 0.00 0.00 2.15
2762 7590 8.565896 TGTATTCTTATCCCATGCAATCATAC 57.434 34.615 0.00 0.00 0.00 2.39
2763 7591 7.611467 TGTATTCTTATCCCATGCAATCATACC 59.389 37.037 0.00 0.00 0.00 2.73
2764 7592 4.922206 TCTTATCCCATGCAATCATACCC 58.078 43.478 0.00 0.00 0.00 3.69
2765 7593 2.610438 ATCCCATGCAATCATACCCC 57.390 50.000 0.00 0.00 0.00 4.95
2766 7594 0.482446 TCCCATGCAATCATACCCCC 59.518 55.000 0.00 0.00 0.00 5.40
2790 7618 1.549203 CCCCCTTTCAGTGGATTGTG 58.451 55.000 0.00 0.00 0.00 3.33
2791 7619 1.549203 CCCCTTTCAGTGGATTGTGG 58.451 55.000 0.00 0.00 0.00 4.17
2792 7620 1.203050 CCCCTTTCAGTGGATTGTGGT 60.203 52.381 0.00 0.00 0.00 4.16
2793 7621 2.162681 CCCTTTCAGTGGATTGTGGTC 58.837 52.381 0.00 0.00 0.00 4.02
2794 7622 2.162681 CCTTTCAGTGGATTGTGGTCC 58.837 52.381 0.00 0.00 38.81 4.46
2795 7623 2.224867 CCTTTCAGTGGATTGTGGTCCT 60.225 50.000 0.00 0.00 39.12 3.85
2796 7624 2.859165 TTCAGTGGATTGTGGTCCTC 57.141 50.000 0.00 0.00 39.12 3.71
2797 7625 1.728323 TCAGTGGATTGTGGTCCTCA 58.272 50.000 0.00 0.00 39.12 3.86
2798 7626 1.347707 TCAGTGGATTGTGGTCCTCAC 59.652 52.381 0.00 0.00 46.23 3.51
2806 7634 3.149899 GTGGTCCTCACATGCTCAG 57.850 57.895 0.00 0.00 45.39 3.35
2807 7635 0.610174 GTGGTCCTCACATGCTCAGA 59.390 55.000 0.00 0.00 45.39 3.27
2808 7636 0.900421 TGGTCCTCACATGCTCAGAG 59.100 55.000 0.00 0.00 0.00 3.35
2810 7638 0.461693 GTCCTCACATGCTCAGAGGC 60.462 60.000 15.49 9.49 46.71 4.70
2811 7639 0.906282 TCCTCACATGCTCAGAGGCA 60.906 55.000 15.49 0.00 46.71 4.75
2812 7640 0.743701 CCTCACATGCTCAGAGGCAC 60.744 60.000 10.09 0.00 45.36 5.01
2813 7641 0.743701 CTCACATGCTCAGAGGCACC 60.744 60.000 0.00 0.00 45.36 5.01
2814 7642 1.196766 TCACATGCTCAGAGGCACCT 61.197 55.000 0.00 0.00 45.36 4.00
2815 7643 1.025113 CACATGCTCAGAGGCACCTG 61.025 60.000 0.00 1.11 45.36 4.00
2816 7644 2.113433 CATGCTCAGAGGCACCTGC 61.113 63.158 0.00 0.00 45.36 4.85
2817 7645 2.599757 ATGCTCAGAGGCACCTGCA 61.600 57.895 0.00 0.00 45.36 4.41
2818 7646 1.923006 ATGCTCAGAGGCACCTGCAT 61.923 55.000 6.44 6.44 45.36 3.96
2819 7647 2.113433 GCTCAGAGGCACCTGCATG 61.113 63.158 0.00 0.00 44.36 4.06
2820 7648 2.045634 TCAGAGGCACCTGCATGC 60.046 61.111 11.82 11.82 45.34 4.06
2826 7654 2.104331 GCACCTGCATGCATGAGC 59.896 61.111 30.64 25.49 45.39 4.26
2827 7655 2.805546 CACCTGCATGCATGAGCC 59.194 61.111 30.64 13.12 41.13 4.70
2828 7656 2.441532 ACCTGCATGCATGAGCCC 60.442 61.111 30.64 12.74 41.13 5.19
2829 7657 2.441348 CCTGCATGCATGAGCCCA 60.441 61.111 30.64 16.66 41.13 5.36
2830 7658 2.055633 CCTGCATGCATGAGCCCAA 61.056 57.895 30.64 6.66 41.13 4.12
2831 7659 1.437573 CTGCATGCATGAGCCCAAG 59.562 57.895 30.64 12.19 41.13 3.61
2832 7660 1.000646 TGCATGCATGAGCCCAAGA 60.001 52.632 30.64 0.00 41.13 3.02
2833 7661 0.396556 TGCATGCATGAGCCCAAGAT 60.397 50.000 30.64 0.00 41.13 2.40
2834 7662 0.750850 GCATGCATGAGCCCAAGATT 59.249 50.000 30.64 0.00 41.13 2.40
2835 7663 1.538204 GCATGCATGAGCCCAAGATTG 60.538 52.381 30.64 0.23 41.13 2.67
2836 7664 0.750850 ATGCATGAGCCCAAGATTGC 59.249 50.000 0.00 0.00 41.13 3.56
2837 7665 1.324740 TGCATGAGCCCAAGATTGCC 61.325 55.000 0.00 0.00 41.13 4.52
2876 7921 5.425217 TCATGGCAGAGGAATACTTTGTAGA 59.575 40.000 0.00 0.00 33.98 2.59
3207 8256 3.659183 AATTCTGGGATCCTGAACCTG 57.341 47.619 12.58 0.00 42.56 4.00
3210 8259 3.199442 TCTGGGATCCTGAACCTGTTA 57.801 47.619 12.58 0.00 0.00 2.41
3269 8318 4.396166 GTCATGATCACGGAAACAGGAATT 59.604 41.667 0.00 0.00 0.00 2.17
3574 8623 3.653835 AAAAAGCTACTCCCTCCATCC 57.346 47.619 0.00 0.00 0.00 3.51
3575 8624 1.512735 AAAGCTACTCCCTCCATCCC 58.487 55.000 0.00 0.00 0.00 3.85
3576 8625 0.343372 AAGCTACTCCCTCCATCCCA 59.657 55.000 0.00 0.00 0.00 4.37
3577 8626 0.570218 AGCTACTCCCTCCATCCCAT 59.430 55.000 0.00 0.00 0.00 4.00
3578 8627 1.795786 AGCTACTCCCTCCATCCCATA 59.204 52.381 0.00 0.00 0.00 2.74
3579 8628 2.182312 AGCTACTCCCTCCATCCCATAA 59.818 50.000 0.00 0.00 0.00 1.90
3580 8629 3.181390 AGCTACTCCCTCCATCCCATAAT 60.181 47.826 0.00 0.00 0.00 1.28
3581 8630 4.047265 AGCTACTCCCTCCATCCCATAATA 59.953 45.833 0.00 0.00 0.00 0.98
3582 8631 4.971924 GCTACTCCCTCCATCCCATAATAT 59.028 45.833 0.00 0.00 0.00 1.28
3583 8632 6.067600 AGCTACTCCCTCCATCCCATAATATA 60.068 42.308 0.00 0.00 0.00 0.86
3584 8633 6.615726 GCTACTCCCTCCATCCCATAATATAA 59.384 42.308 0.00 0.00 0.00 0.98
3585 8634 7.202047 GCTACTCCCTCCATCCCATAATATAAG 60.202 44.444 0.00 0.00 0.00 1.73
3586 8635 6.826727 ACTCCCTCCATCCCATAATATAAGA 58.173 40.000 0.00 0.00 0.00 2.10
3587 8636 7.263901 ACTCCCTCCATCCCATAATATAAGAA 58.736 38.462 0.00 0.00 0.00 2.52
3588 8637 7.182930 ACTCCCTCCATCCCATAATATAAGAAC 59.817 40.741 0.00 0.00 0.00 3.01
3589 8638 6.156256 TCCCTCCATCCCATAATATAAGAACG 59.844 42.308 0.00 0.00 0.00 3.95
3590 8639 6.070194 CCCTCCATCCCATAATATAAGAACGT 60.070 42.308 0.00 0.00 0.00 3.99
3591 8640 7.394816 CCTCCATCCCATAATATAAGAACGTT 58.605 38.462 0.00 0.00 0.00 3.99
3592 8641 7.883311 CCTCCATCCCATAATATAAGAACGTTT 59.117 37.037 0.46 0.00 0.00 3.60
3593 8642 9.284968 CTCCATCCCATAATATAAGAACGTTTT 57.715 33.333 0.46 0.00 0.00 2.43
3594 8643 9.635404 TCCATCCCATAATATAAGAACGTTTTT 57.365 29.630 9.22 9.22 0.00 1.94
3624 8673 9.233232 GCTTGAAAAACGTTCTTATATTATGGG 57.767 33.333 0.00 0.00 0.00 4.00
3627 8676 8.605746 TGAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
3628 8677 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3629 8678 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3630 8679 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3631 8680 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3632 8681 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3633 8682 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3634 8683 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3704 8757 4.657814 TCCTGTTCCAGAAAATTAGCCT 57.342 40.909 0.00 0.00 32.44 4.58
3705 8758 4.335416 TCCTGTTCCAGAAAATTAGCCTG 58.665 43.478 0.00 0.00 32.44 4.85
3706 8759 4.042809 TCCTGTTCCAGAAAATTAGCCTGA 59.957 41.667 0.00 0.00 32.44 3.86
3707 8760 4.156739 CCTGTTCCAGAAAATTAGCCTGAC 59.843 45.833 0.00 0.00 32.44 3.51
3708 8761 4.724399 TGTTCCAGAAAATTAGCCTGACA 58.276 39.130 0.00 0.00 0.00 3.58
3709 8762 5.136828 TGTTCCAGAAAATTAGCCTGACAA 58.863 37.500 0.00 0.00 0.00 3.18
3710 8763 5.241506 TGTTCCAGAAAATTAGCCTGACAAG 59.758 40.000 0.00 0.00 0.00 3.16
3750 8815 7.177568 AGCCTATATAGATAGCATTATGGACCG 59.822 40.741 11.53 0.00 34.70 4.79
3792 8857 7.287696 TCACAAGCACTAGTATCAGATATTGGA 59.712 37.037 0.00 0.00 0.00 3.53
3794 8859 7.928706 ACAAGCACTAGTATCAGATATTGGAAC 59.071 37.037 0.00 0.00 0.00 3.62
3795 8860 7.603180 AGCACTAGTATCAGATATTGGAACA 57.397 36.000 0.00 0.00 0.00 3.18
3857 8923 5.355071 TGCAGTGGAACAAATGATCAGTATC 59.645 40.000 0.09 0.00 44.16 2.24
3947 9013 2.409975 TGTCTTGGTGTACTAAAGCGC 58.590 47.619 0.00 0.00 0.00 5.92
4090 9156 7.233389 AGTGTATATGTGGATTACCTAGCTG 57.767 40.000 0.00 0.00 37.04 4.24
4133 9199 0.097674 CGTTGGCTAGTGCATGAAGC 59.902 55.000 0.00 8.84 45.96 3.86
4231 9297 2.108250 CCCCCTTTGTCCACATATAGGG 59.892 54.545 12.18 12.18 38.31 3.53
4232 9298 2.108250 CCCCTTTGTCCACATATAGGGG 59.892 54.545 19.25 19.25 45.17 4.79
4233 9299 2.489073 CCCTTTGTCCACATATAGGGGC 60.489 54.545 11.62 0.00 42.23 5.80
4234 9300 2.489073 CCTTTGTCCACATATAGGGGCC 60.489 54.545 0.00 0.00 42.23 5.80
4235 9301 1.145571 TTGTCCACATATAGGGGCCC 58.854 55.000 17.12 17.12 42.23 5.80
4245 9311 0.849094 ATAGGGGCCCTTTGTCCACA 60.849 55.000 33.98 10.72 34.61 4.17
4253 9319 2.158608 GCCCTTTGTCCACATATAGGCT 60.159 50.000 0.00 0.00 0.00 4.58
4295 9361 2.299013 TCTATGCACGTGTTGACTTCCT 59.701 45.455 18.38 0.00 0.00 3.36
4351 9417 2.041620 TGTGGATTGCTTAGCCCTTTCT 59.958 45.455 0.29 0.00 0.00 2.52
4659 9726 8.543774 AGAAGAGGATACACATTGTTGTAATCT 58.456 33.333 0.00 0.00 35.60 2.40
4928 9995 5.613795 GCACGACGATTTAACATTTCTCACA 60.614 40.000 0.00 0.00 0.00 3.58
5048 10115 3.930848 CCTGTAAGTGCTAACCTTTACCG 59.069 47.826 0.00 0.00 0.00 4.02
5218 10295 1.395635 GTGGATGCATGGATCAAGCA 58.604 50.000 26.07 13.77 42.11 3.91
5219 10296 1.752498 GTGGATGCATGGATCAAGCAA 59.248 47.619 26.07 5.76 41.28 3.91
5220 10297 2.364324 GTGGATGCATGGATCAAGCAAT 59.636 45.455 26.07 0.00 41.28 3.56
5221 10298 2.364002 TGGATGCATGGATCAAGCAATG 59.636 45.455 26.07 0.03 41.28 2.82
5222 10299 2.364324 GGATGCATGGATCAAGCAATGT 59.636 45.455 26.07 0.00 41.28 2.71
5223 10300 3.570975 GGATGCATGGATCAAGCAATGTA 59.429 43.478 26.07 0.00 41.28 2.29
5224 10301 4.219944 GGATGCATGGATCAAGCAATGTAT 59.780 41.667 26.07 3.37 41.28 2.29
5225 10302 4.577834 TGCATGGATCAAGCAATGTATG 57.422 40.909 3.82 0.00 35.14 2.39
5226 10303 3.319689 TGCATGGATCAAGCAATGTATGG 59.680 43.478 3.82 0.00 35.14 2.74
5227 10304 3.570975 GCATGGATCAAGCAATGTATGGA 59.429 43.478 0.00 0.00 0.00 3.41
5228 10305 4.219944 GCATGGATCAAGCAATGTATGGAT 59.780 41.667 0.00 0.00 0.00 3.41
5229 10306 5.279306 GCATGGATCAAGCAATGTATGGATT 60.279 40.000 0.00 0.00 0.00 3.01
5230 10307 5.777850 TGGATCAAGCAATGTATGGATTG 57.222 39.130 0.00 0.00 36.55 2.67
5231 10308 5.202765 TGGATCAAGCAATGTATGGATTGT 58.797 37.500 0.00 0.00 35.98 2.71
5232 10309 5.068067 TGGATCAAGCAATGTATGGATTGTG 59.932 40.000 0.00 0.00 35.98 3.33
5233 10310 5.068198 GGATCAAGCAATGTATGGATTGTGT 59.932 40.000 0.00 0.00 35.98 3.72
5234 10311 5.313520 TCAAGCAATGTATGGATTGTGTG 57.686 39.130 0.00 0.00 35.98 3.82
5235 10312 5.008980 TCAAGCAATGTATGGATTGTGTGA 58.991 37.500 0.00 0.00 35.98 3.58
5236 10313 5.124297 TCAAGCAATGTATGGATTGTGTGAG 59.876 40.000 0.00 0.00 35.98 3.51
5237 10314 3.379372 AGCAATGTATGGATTGTGTGAGC 59.621 43.478 0.00 0.00 35.98 4.26
5238 10315 3.129113 GCAATGTATGGATTGTGTGAGCA 59.871 43.478 0.00 0.00 35.98 4.26
5239 10316 4.202080 GCAATGTATGGATTGTGTGAGCAT 60.202 41.667 0.00 0.00 35.98 3.79
5240 10317 5.680408 GCAATGTATGGATTGTGTGAGCATT 60.680 40.000 0.00 0.00 35.98 3.56
5241 10318 6.334989 CAATGTATGGATTGTGTGAGCATTT 58.665 36.000 0.00 0.00 0.00 2.32
5242 10319 5.981088 TGTATGGATTGTGTGAGCATTTT 57.019 34.783 0.00 0.00 0.00 1.82
5243 10320 5.953183 TGTATGGATTGTGTGAGCATTTTC 58.047 37.500 0.00 0.00 0.00 2.29
5244 10321 3.557577 TGGATTGTGTGAGCATTTTCG 57.442 42.857 0.00 0.00 0.00 3.46
5245 10322 2.884012 TGGATTGTGTGAGCATTTTCGT 59.116 40.909 0.00 0.00 0.00 3.85
5246 10323 3.236816 GGATTGTGTGAGCATTTTCGTG 58.763 45.455 0.00 0.00 0.00 4.35
5247 10324 2.772568 TTGTGTGAGCATTTTCGTGG 57.227 45.000 0.00 0.00 0.00 4.94
5248 10325 1.960417 TGTGTGAGCATTTTCGTGGA 58.040 45.000 0.00 0.00 0.00 4.02
5249 10326 2.503331 TGTGTGAGCATTTTCGTGGAT 58.497 42.857 0.00 0.00 0.00 3.41
5250 10327 2.226200 TGTGTGAGCATTTTCGTGGATG 59.774 45.455 0.00 0.00 0.00 3.51
5251 10328 1.199789 TGTGAGCATTTTCGTGGATGC 59.800 47.619 10.23 10.23 46.88 3.91
5255 10332 1.563111 GCATTTTCGTGGATGCATGG 58.437 50.000 2.46 0.00 46.03 3.66
5256 10333 1.134753 GCATTTTCGTGGATGCATGGA 59.865 47.619 2.46 0.00 46.03 3.41
5257 10334 2.223876 GCATTTTCGTGGATGCATGGAT 60.224 45.455 2.46 0.00 46.03 3.41
5258 10335 3.377439 CATTTTCGTGGATGCATGGATG 58.623 45.455 2.46 5.50 0.00 3.51
5270 10347 0.384309 CATGGATGCATGGTGTGAGC 59.616 55.000 18.76 0.00 0.00 4.26
5271 10348 0.033894 ATGGATGCATGGTGTGAGCA 60.034 50.000 2.46 0.00 43.14 4.26
5276 10353 2.728690 TGCATGGTGTGAGCATTTTC 57.271 45.000 0.00 0.00 33.46 2.29
5277 10354 1.068402 TGCATGGTGTGAGCATTTTCG 60.068 47.619 0.00 0.00 33.46 3.46
5278 10355 1.068333 GCATGGTGTGAGCATTTTCGT 60.068 47.619 0.00 0.00 33.46 3.85
5279 10356 2.161410 GCATGGTGTGAGCATTTTCGTA 59.839 45.455 0.00 0.00 33.46 3.43
5280 10357 3.365868 GCATGGTGTGAGCATTTTCGTAA 60.366 43.478 0.00 0.00 33.46 3.18
5281 10358 4.793071 CATGGTGTGAGCATTTTCGTAAA 58.207 39.130 0.00 0.00 33.46 2.01
5282 10359 5.401550 CATGGTGTGAGCATTTTCGTAAAT 58.598 37.500 0.00 0.00 33.46 1.40
5284 10361 4.165779 GGTGTGAGCATTTTCGTAAATGG 58.834 43.478 23.51 9.89 46.93 3.16
5285 10362 4.083003 GGTGTGAGCATTTTCGTAAATGGA 60.083 41.667 23.51 0.00 46.93 3.41
5286 10363 5.393027 GGTGTGAGCATTTTCGTAAATGGAT 60.393 40.000 23.51 8.07 46.93 3.41
5287 10364 5.512788 GTGTGAGCATTTTCGTAAATGGATG 59.487 40.000 23.51 5.74 46.93 3.51
5288 10365 5.036737 GTGAGCATTTTCGTAAATGGATGG 58.963 41.667 23.51 4.11 46.93 3.51
5289 10366 4.946772 TGAGCATTTTCGTAAATGGATGGA 59.053 37.500 23.51 0.00 46.93 3.41
5290 10367 5.593909 TGAGCATTTTCGTAAATGGATGGAT 59.406 36.000 23.51 1.76 46.93 3.41
5291 10368 6.096705 TGAGCATTTTCGTAAATGGATGGATT 59.903 34.615 23.51 0.00 46.93 3.01
5292 10369 6.275335 AGCATTTTCGTAAATGGATGGATTG 58.725 36.000 23.51 2.94 46.93 2.67
5293 10370 6.096705 AGCATTTTCGTAAATGGATGGATTGA 59.903 34.615 23.51 0.00 46.93 2.57
5294 10371 6.418819 GCATTTTCGTAAATGGATGGATTGAG 59.581 38.462 23.51 0.65 46.93 3.02
5295 10372 5.499139 TTTCGTAAATGGATGGATTGAGC 57.501 39.130 0.00 0.00 0.00 4.26
5296 10373 4.149511 TCGTAAATGGATGGATTGAGCA 57.850 40.909 0.00 0.00 0.00 4.26
5297 10374 4.717877 TCGTAAATGGATGGATTGAGCAT 58.282 39.130 0.00 0.00 0.00 3.79
5298 10375 5.132502 TCGTAAATGGATGGATTGAGCATT 58.867 37.500 0.00 0.00 0.00 3.56
5299 10376 5.593909 TCGTAAATGGATGGATTGAGCATTT 59.406 36.000 0.00 0.00 0.00 2.32
5300 10377 6.096705 TCGTAAATGGATGGATTGAGCATTTT 59.903 34.615 0.00 0.00 0.00 1.82
5301 10378 6.418819 CGTAAATGGATGGATTGAGCATTTTC 59.581 38.462 0.00 0.00 0.00 2.29
5302 10379 4.579454 ATGGATGGATTGAGCATTTTCG 57.421 40.909 0.00 0.00 0.00 3.46
5303 10380 3.355378 TGGATGGATTGAGCATTTTCGT 58.645 40.909 0.00 0.00 0.00 3.85
5304 10381 4.522114 TGGATGGATTGAGCATTTTCGTA 58.478 39.130 0.00 0.00 0.00 3.43
5305 10382 4.946772 TGGATGGATTGAGCATTTTCGTAA 59.053 37.500 0.00 0.00 0.00 3.18
5306 10383 5.417266 TGGATGGATTGAGCATTTTCGTAAA 59.583 36.000 0.00 0.00 0.00 2.01
5307 10384 6.096705 TGGATGGATTGAGCATTTTCGTAAAT 59.903 34.615 0.00 0.00 34.29 1.40
5309 10386 5.649557 TGGATTGAGCATTTTCGTAAATGG 58.350 37.500 23.51 9.89 46.93 3.16
5310 10387 5.417266 TGGATTGAGCATTTTCGTAAATGGA 59.583 36.000 23.51 0.00 46.93 3.41
5311 10388 6.096705 TGGATTGAGCATTTTCGTAAATGGAT 59.903 34.615 23.51 8.07 46.93 3.41
5312 10389 6.418819 GGATTGAGCATTTTCGTAAATGGATG 59.581 38.462 23.51 5.74 46.93 3.51
5313 10390 5.247507 TGAGCATTTTCGTAAATGGATGG 57.752 39.130 23.51 4.11 46.93 3.51
5314 10391 4.946772 TGAGCATTTTCGTAAATGGATGGA 59.053 37.500 23.51 0.00 46.93 3.41
5315 10392 5.593909 TGAGCATTTTCGTAAATGGATGGAT 59.406 36.000 23.51 1.76 46.93 3.41
5316 10393 6.076981 AGCATTTTCGTAAATGGATGGATC 57.923 37.500 23.51 9.32 46.93 3.36
5317 10394 5.829924 AGCATTTTCGTAAATGGATGGATCT 59.170 36.000 23.51 11.03 46.93 2.75
5318 10395 6.322201 AGCATTTTCGTAAATGGATGGATCTT 59.678 34.615 23.51 0.15 46.93 2.40
5319 10396 7.502226 AGCATTTTCGTAAATGGATGGATCTTA 59.498 33.333 23.51 0.00 46.93 2.10
5320 10397 7.591426 GCATTTTCGTAAATGGATGGATCTTAC 59.409 37.037 23.51 4.33 46.93 2.34
5321 10398 8.620416 CATTTTCGTAAATGGATGGATCTTACA 58.380 33.333 17.06 0.00 44.43 2.41
5322 10399 7.786178 TTTCGTAAATGGATGGATCTTACAG 57.214 36.000 0.00 0.00 0.00 2.74
5323 10400 6.479972 TCGTAAATGGATGGATCTTACAGT 57.520 37.500 0.00 0.00 0.00 3.55
5324 10401 7.591421 TCGTAAATGGATGGATCTTACAGTA 57.409 36.000 0.00 0.00 0.00 2.74
5325 10402 8.190326 TCGTAAATGGATGGATCTTACAGTAT 57.810 34.615 0.00 0.00 0.00 2.12
5326 10403 8.304596 TCGTAAATGGATGGATCTTACAGTATC 58.695 37.037 0.00 0.00 0.00 2.24
5327 10404 8.307483 CGTAAATGGATGGATCTTACAGTATCT 58.693 37.037 0.00 0.00 0.00 1.98
5328 10405 9.429359 GTAAATGGATGGATCTTACAGTATCTG 57.571 37.037 0.00 0.00 37.52 2.90
5329 10406 7.862274 AATGGATGGATCTTACAGTATCTGA 57.138 36.000 3.70 0.00 35.18 3.27
5330 10407 7.862274 ATGGATGGATCTTACAGTATCTGAA 57.138 36.000 3.70 0.00 35.18 3.02
5331 10408 7.862274 TGGATGGATCTTACAGTATCTGAAT 57.138 36.000 3.70 0.00 35.18 2.57
5332 10409 8.267620 TGGATGGATCTTACAGTATCTGAATT 57.732 34.615 3.70 0.00 35.18 2.17
5333 10410 8.717717 TGGATGGATCTTACAGTATCTGAATTT 58.282 33.333 3.70 0.00 35.18 1.82
5334 10411 8.997323 GGATGGATCTTACAGTATCTGAATTTG 58.003 37.037 3.70 0.00 35.18 2.32
5335 10412 8.915057 ATGGATCTTACAGTATCTGAATTTGG 57.085 34.615 3.70 0.00 35.18 3.28
5336 10413 7.861629 TGGATCTTACAGTATCTGAATTTGGT 58.138 34.615 3.70 0.00 35.18 3.67
5337 10414 8.988060 TGGATCTTACAGTATCTGAATTTGGTA 58.012 33.333 3.70 0.00 35.18 3.25
5338 10415 9.832445 GGATCTTACAGTATCTGAATTTGGTAA 57.168 33.333 3.70 0.00 35.18 2.85
5343 10420 9.967451 TTACAGTATCTGAATTTGGTAAATGGA 57.033 29.630 3.70 0.00 35.18 3.41
5345 10422 8.906867 ACAGTATCTGAATTTGGTAAATGGATG 58.093 33.333 3.70 0.00 35.18 3.51
5346 10423 7.864379 CAGTATCTGAATTTGGTAAATGGATGC 59.136 37.037 0.00 0.00 32.44 3.91
5347 10424 6.795144 ATCTGAATTTGGTAAATGGATGCA 57.205 33.333 0.00 0.00 0.00 3.96
5348 10425 6.211587 TCTGAATTTGGTAAATGGATGCAG 57.788 37.500 0.00 0.00 0.00 4.41
5349 10426 5.127519 TCTGAATTTGGTAAATGGATGCAGG 59.872 40.000 0.00 0.00 0.00 4.85
5350 10427 4.776837 TGAATTTGGTAAATGGATGCAGGT 59.223 37.500 0.00 0.00 0.00 4.00
5351 10428 4.741321 ATTTGGTAAATGGATGCAGGTG 57.259 40.909 0.00 0.00 0.00 4.00
5352 10429 2.897271 TGGTAAATGGATGCAGGTGT 57.103 45.000 0.00 0.00 0.00 4.16
5353 10430 2.445427 TGGTAAATGGATGCAGGTGTG 58.555 47.619 0.00 0.00 0.00 3.82
5354 10431 2.040947 TGGTAAATGGATGCAGGTGTGA 59.959 45.455 0.00 0.00 0.00 3.58
5355 10432 2.684881 GGTAAATGGATGCAGGTGTGAG 59.315 50.000 0.00 0.00 0.00 3.51
5356 10433 1.180029 AAATGGATGCAGGTGTGAGC 58.820 50.000 0.00 0.00 0.00 4.26
5357 10434 0.038599 AATGGATGCAGGTGTGAGCA 59.961 50.000 0.00 0.00 45.92 4.26
5363 10440 0.592637 TGCAGGTGTGAGCATTTTCG 59.407 50.000 0.00 0.00 35.51 3.46
5364 10441 0.593128 GCAGGTGTGAGCATTTTCGT 59.407 50.000 0.00 0.00 0.00 3.85
5365 10442 1.664016 GCAGGTGTGAGCATTTTCGTG 60.664 52.381 0.00 0.00 0.00 4.35
5366 10443 1.069022 CAGGTGTGAGCATTTTCGTGG 60.069 52.381 0.00 0.00 0.00 4.94
5367 10444 1.202758 AGGTGTGAGCATTTTCGTGGA 60.203 47.619 0.00 0.00 0.00 4.02
5368 10445 1.812571 GGTGTGAGCATTTTCGTGGAT 59.187 47.619 0.00 0.00 0.00 3.41
5369 10446 2.414559 GGTGTGAGCATTTTCGTGGATG 60.415 50.000 0.00 0.00 0.00 3.51
5370 10447 1.199789 TGTGAGCATTTTCGTGGATGC 59.800 47.619 10.23 10.23 46.88 3.91
5407 10484 6.545666 TGTCTCAGTTGTGTTGGATTTATGTT 59.454 34.615 0.00 0.00 0.00 2.71
5500 10577 9.603921 CTGAACCATGGATGCTAAATAATTTTT 57.396 29.630 21.47 0.00 0.00 1.94
5532 10609 3.136443 TGTAATAGAGGGTCCATGCTTGG 59.864 47.826 12.41 12.41 45.15 3.61
5565 10642 7.939039 TCTGAGATTTGAATTCAAGTAGGTTGT 59.061 33.333 19.64 2.72 37.15 3.32
5597 10674 6.976925 GCAATTTAGAGTTGGGATTCTTGATG 59.023 38.462 0.00 0.00 0.00 3.07
5600 10677 3.960571 AGAGTTGGGATTCTTGATGTGG 58.039 45.455 0.00 0.00 0.00 4.17
5601 10678 3.588842 AGAGTTGGGATTCTTGATGTGGA 59.411 43.478 0.00 0.00 0.00 4.02
5602 10679 4.229123 AGAGTTGGGATTCTTGATGTGGAT 59.771 41.667 0.00 0.00 0.00 3.41
5603 10680 5.429762 AGAGTTGGGATTCTTGATGTGGATA 59.570 40.000 0.00 0.00 0.00 2.59
5604 10681 6.069440 AGAGTTGGGATTCTTGATGTGGATAA 60.069 38.462 0.00 0.00 0.00 1.75
5605 10682 6.676558 AGTTGGGATTCTTGATGTGGATAAT 58.323 36.000 0.00 0.00 0.00 1.28
5606 10683 6.548622 AGTTGGGATTCTTGATGTGGATAATG 59.451 38.462 0.00 0.00 0.00 1.90
5607 10684 4.828939 TGGGATTCTTGATGTGGATAATGC 59.171 41.667 0.00 0.00 0.00 3.56
5608 10685 4.083110 GGGATTCTTGATGTGGATAATGCG 60.083 45.833 0.00 0.00 0.00 4.73
5609 10686 4.516698 GGATTCTTGATGTGGATAATGCGT 59.483 41.667 0.00 0.00 0.00 5.24
5693 10770 8.279970 ACATTATGCAAATATGTATATGCGGT 57.720 30.769 9.22 0.00 41.61 5.68
5694 10771 8.397906 ACATTATGCAAATATGTATATGCGGTC 58.602 33.333 9.22 0.00 41.61 4.79
5695 10772 7.913674 TTATGCAAATATGTATATGCGGTCA 57.086 32.000 0.00 0.00 41.61 4.02
5696 10773 8.504812 TTATGCAAATATGTATATGCGGTCAT 57.495 30.769 0.00 0.00 41.61 3.06
5697 10774 6.180771 TGCAAATATGTATATGCGGTCATG 57.819 37.500 0.00 0.00 41.61 3.07
5698 10775 5.123661 TGCAAATATGTATATGCGGTCATGG 59.876 40.000 0.00 0.00 41.61 3.66
5699 10776 5.572211 CAAATATGTATATGCGGTCATGGC 58.428 41.667 0.00 0.00 34.22 4.40
5700 10777 2.857186 ATGTATATGCGGTCATGGCA 57.143 45.000 0.00 0.00 45.71 4.92
5701 10778 2.168326 TGTATATGCGGTCATGGCAG 57.832 50.000 0.00 0.00 44.71 4.85
5702 10779 1.691434 TGTATATGCGGTCATGGCAGA 59.309 47.619 0.19 0.00 44.71 4.26
5703 10780 2.302733 TGTATATGCGGTCATGGCAGAT 59.697 45.455 0.19 4.76 44.71 2.90
5704 10781 1.817357 ATATGCGGTCATGGCAGATG 58.183 50.000 0.19 0.00 44.71 2.90
5705 10782 0.469494 TATGCGGTCATGGCAGATGT 59.531 50.000 0.19 0.00 44.71 3.06
5706 10783 1.099295 ATGCGGTCATGGCAGATGTG 61.099 55.000 0.19 0.00 44.71 3.21
5707 10784 1.746615 GCGGTCATGGCAGATGTGT 60.747 57.895 0.19 0.00 0.00 3.72
5708 10785 1.709147 GCGGTCATGGCAGATGTGTC 61.709 60.000 0.19 0.00 0.00 3.67
5709 10786 1.423721 CGGTCATGGCAGATGTGTCG 61.424 60.000 0.00 0.00 0.00 4.35
5710 10787 0.391661 GGTCATGGCAGATGTGTCGT 60.392 55.000 0.00 0.00 0.00 4.34
5711 10788 1.442769 GTCATGGCAGATGTGTCGTT 58.557 50.000 0.00 0.00 0.00 3.85
5734 10811 1.851304 TCCTGGGCATCCATTGTTTC 58.149 50.000 0.00 0.00 43.11 2.78
5735 10812 1.358787 TCCTGGGCATCCATTGTTTCT 59.641 47.619 0.00 0.00 43.11 2.52
5736 10813 1.479323 CCTGGGCATCCATTGTTTCTG 59.521 52.381 0.00 0.00 43.11 3.02
5737 10814 0.896923 TGGGCATCCATTGTTTCTGC 59.103 50.000 0.00 0.00 38.32 4.26
5738 10815 1.188863 GGGCATCCATTGTTTCTGCT 58.811 50.000 0.00 0.00 33.43 4.24
5739 10816 1.135721 GGGCATCCATTGTTTCTGCTC 59.864 52.381 0.00 0.00 33.43 4.26
5771 10858 1.730501 CAGATGTGTCATTGCGGTCT 58.269 50.000 0.00 0.00 0.00 3.85
5778 10865 3.908189 CATTGCGGTCTGCCATGA 58.092 55.556 11.46 0.00 46.84 3.07
5838 10925 0.526662 GGCTTCCTTTCGACTCGAGA 59.473 55.000 21.68 0.00 37.14 4.04
5870 10957 1.142185 CTCTGCGCGATGTCGTTGAT 61.142 55.000 12.10 0.00 42.22 2.57
5893 10980 0.813184 ATGCAAGGTTGGATGCTTCG 59.187 50.000 0.00 0.00 42.97 3.79
6138 12912 2.113807 TGCTACAGATCATGCCTGAGT 58.886 47.619 17.91 3.22 34.12 3.41
6179 12953 1.445716 CGACTCCGCCTCTATCCGTT 61.446 60.000 0.00 0.00 0.00 4.44
6186 12960 1.539065 CGCCTCTATCCGTTGAGCAAT 60.539 52.381 0.00 0.00 0.00 3.56
6211 12985 0.688087 GTGGACCCCCTCGAGATCTT 60.688 60.000 15.71 0.00 0.00 2.40
6313 13087 0.603569 ATGTCTTGCTCGTCCGAGTT 59.396 50.000 17.11 0.00 43.70 3.01
6330 13104 0.387565 GTTCATTGGGCACGTGGTTT 59.612 50.000 18.88 0.00 0.00 3.27
6337 13111 0.034337 GGGCACGTGGTTTCTGTAGA 59.966 55.000 18.88 0.00 0.00 2.59
6405 13180 2.977405 ACAGCGAAAGAGATTTGTGC 57.023 45.000 0.00 0.00 0.00 4.57
6427 13202 2.202756 CTCGCTACCTTGGACGCC 60.203 66.667 0.00 0.00 0.00 5.68
6429 13204 4.430765 CGCTACCTTGGACGCCGT 62.431 66.667 0.00 0.00 0.00 5.68
6490 13265 4.837218 AGGAGAAGGTCATCAGGGATAAT 58.163 43.478 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.016623 GTGTAACATTTGGAGTTTAACTTGTTC 57.983 33.333 13.28 8.00 36.32 3.18
96 98 7.870954 TCATGTGAAACGAGATAGTAGTGTTTT 59.129 33.333 0.00 0.00 42.39 2.43
369 1056 6.397272 AGTGCTCTCTGAATTTAGACTCAAG 58.603 40.000 0.00 0.00 0.00 3.02
378 1071 5.128919 ACTCAACAAGTGCTCTCTGAATTT 58.871 37.500 0.00 0.00 36.65 1.82
407 1100 4.336433 AGCGCTTGCATCTATATTGTGTTT 59.664 37.500 2.64 0.00 42.66 2.83
417 1110 6.207691 TGTATATATGAGCGCTTGCATCTA 57.792 37.500 13.26 8.95 42.66 1.98
453 1146 3.930229 GTGTGTAAGTGCGTTCATATGGA 59.070 43.478 2.13 0.00 0.00 3.41
456 1149 3.581755 ACGTGTGTAAGTGCGTTCATAT 58.418 40.909 0.00 0.00 33.54 1.78
465 1158 1.717645 GGCGTAAGACGTGTGTAAGTG 59.282 52.381 0.00 0.00 44.73 3.16
479 1176 4.398988 TCTCGAAGGTGTTTATAGGCGTAA 59.601 41.667 0.00 0.00 0.00 3.18
481 1178 2.756760 TCTCGAAGGTGTTTATAGGCGT 59.243 45.455 0.00 0.00 0.00 5.68
483 1181 5.063564 CAGTTTCTCGAAGGTGTTTATAGGC 59.936 44.000 0.00 0.00 0.00 3.93
489 1187 2.872858 GCTCAGTTTCTCGAAGGTGTTT 59.127 45.455 0.00 0.00 0.00 2.83
491 1189 1.270358 GGCTCAGTTTCTCGAAGGTGT 60.270 52.381 0.00 0.00 0.00 4.16
497 1195 0.888619 ATGTCGGCTCAGTTTCTCGA 59.111 50.000 0.00 0.00 0.00 4.04
498 1196 2.561733 TATGTCGGCTCAGTTTCTCG 57.438 50.000 0.00 0.00 0.00 4.04
503 1568 4.679373 AAGATGATATGTCGGCTCAGTT 57.321 40.909 0.00 0.00 0.00 3.16
541 1606 7.516481 GTTTAATGAAAGAAGACGTTCCTACC 58.484 38.462 0.00 0.00 34.54 3.18
542 1607 7.095899 ACGTTTAATGAAAGAAGACGTTCCTAC 60.096 37.037 0.00 0.00 38.91 3.18
543 1608 6.925165 ACGTTTAATGAAAGAAGACGTTCCTA 59.075 34.615 0.00 0.00 38.91 2.94
544 1609 5.756833 ACGTTTAATGAAAGAAGACGTTCCT 59.243 36.000 0.00 0.00 38.91 3.36
545 1610 5.844396 CACGTTTAATGAAAGAAGACGTTCC 59.156 40.000 0.00 0.00 39.85 3.62
546 1611 5.336209 GCACGTTTAATGAAAGAAGACGTTC 59.664 40.000 0.00 0.00 39.85 3.95
568 1653 8.875803 AGTTATTTTAGTATTTTCGACGATGCA 58.124 29.630 0.00 0.00 0.00 3.96
593 1678 9.338291 CATGATTCGCATTTATTTATCCTGAAG 57.662 33.333 0.00 0.00 34.15 3.02
596 1681 9.764870 CTACATGATTCGCATTTATTTATCCTG 57.235 33.333 0.00 0.00 34.15 3.86
601 1686 9.489084 AGTAGCTACATGATTCGCATTTATTTA 57.511 29.630 25.28 0.00 34.15 1.40
602 1687 8.383318 AGTAGCTACATGATTCGCATTTATTT 57.617 30.769 25.28 0.00 34.15 1.40
603 1688 7.969536 AGTAGCTACATGATTCGCATTTATT 57.030 32.000 25.28 0.00 34.15 1.40
612 1697 6.309251 GCCGATTTCTAGTAGCTACATGATTC 59.691 42.308 25.28 17.75 0.00 2.52
620 1705 4.653868 AGCTAGCCGATTTCTAGTAGCTA 58.346 43.478 12.13 0.00 41.05 3.32
673 1758 9.794685 GGCAAGGAAGAGAATATTTTAAAGAAG 57.205 33.333 0.00 0.00 0.00 2.85
705 1790 3.321111 ACGGCCATACTCCATACTGTTAG 59.679 47.826 2.24 0.00 0.00 2.34
706 1791 3.302161 ACGGCCATACTCCATACTGTTA 58.698 45.455 2.24 0.00 0.00 2.41
707 1792 2.116238 ACGGCCATACTCCATACTGTT 58.884 47.619 2.24 0.00 0.00 3.16
708 1793 1.789523 ACGGCCATACTCCATACTGT 58.210 50.000 2.24 0.00 0.00 3.55
709 1794 3.368427 CCATACGGCCATACTCCATACTG 60.368 52.174 2.24 0.00 0.00 2.74
710 1795 2.832129 CCATACGGCCATACTCCATACT 59.168 50.000 2.24 0.00 0.00 2.12
813 1898 0.534203 GGCGTGTGAGGTGGAAAGAA 60.534 55.000 0.00 0.00 0.00 2.52
1036 5735 2.509561 GAGGGTTCGGCTTCGAGC 60.510 66.667 0.00 0.00 44.25 5.03
1053 5752 4.573607 GGGTTAGGTATCTTTTACTTGCCG 59.426 45.833 0.00 0.00 0.00 5.69
1060 5759 6.131961 ACGAGCTAGGGTTAGGTATCTTTTA 58.868 40.000 0.00 0.00 37.73 1.52
1065 5764 2.819019 GGACGAGCTAGGGTTAGGTATC 59.181 54.545 0.00 0.00 37.73 2.24
1299 5998 1.617947 GGAAGGACTGGACAGCGGAT 61.618 60.000 0.00 0.00 0.00 4.18
1382 6081 1.375523 GACACCGAATCAGCCCGTT 60.376 57.895 0.00 0.00 0.00 4.44
1912 6644 4.809193 AGCCTGTATATTCTGTCTCCTCA 58.191 43.478 0.00 0.00 0.00 3.86
1936 6668 0.541998 TGCGAGGTGGGAAAGAGAGA 60.542 55.000 0.00 0.00 0.00 3.10
1988 6720 7.579761 AGAAGAATGAAAGAGAGCAAGTTTT 57.420 32.000 0.00 0.00 0.00 2.43
2154 6886 9.120538 GCCACTAAAATTCTAACTCCATTCATA 57.879 33.333 0.00 0.00 0.00 2.15
2339 7071 2.048597 CCGCTTGCACACGGTCTA 60.049 61.111 16.61 0.00 44.46 2.59
2345 7077 2.047274 TAGCTCCCGCTTGCACAC 60.047 61.111 0.00 0.00 46.47 3.82
2370 7102 8.774183 TCTAGTAAAAATAATAAGGACAGCCCA 58.226 33.333 0.00 0.00 37.41 5.36
2417 7151 6.755141 GCATATGCATGAAACACTCTGAAAAT 59.245 34.615 22.84 0.00 41.59 1.82
2426 7160 5.740569 CACACTAAGCATATGCATGAAACAC 59.259 40.000 28.62 0.00 45.16 3.32
2446 7180 3.150848 TGAGCATCGACACTATCACAC 57.849 47.619 0.00 0.00 38.61 3.82
2450 7184 5.411361 ACTCTAGATGAGCATCGACACTATC 59.589 44.000 4.93 0.00 46.41 2.08
2451 7185 5.312895 ACTCTAGATGAGCATCGACACTAT 58.687 41.667 4.93 0.00 46.41 2.12
2452 7186 4.709250 ACTCTAGATGAGCATCGACACTA 58.291 43.478 4.93 0.00 46.41 2.74
2453 7187 3.550820 ACTCTAGATGAGCATCGACACT 58.449 45.455 4.93 0.00 46.41 3.55
2454 7188 3.980646 ACTCTAGATGAGCATCGACAC 57.019 47.619 4.93 0.00 46.41 3.67
2455 7189 4.991153 AAACTCTAGATGAGCATCGACA 57.009 40.909 4.93 0.00 46.41 4.35
2499 7233 6.716284 ACTTCCAAAAATGAAGGAACCAAAA 58.284 32.000 5.16 0.00 42.79 2.44
2555 7290 4.574674 AATTATGAAGCCACACCTCTCA 57.425 40.909 0.00 0.00 0.00 3.27
2583 7318 5.466393 CCCACAATTTTCAAGAACCATTCAC 59.534 40.000 0.00 0.00 0.00 3.18
2611 7346 1.131126 CAGCCACTTTATGAAGCCACG 59.869 52.381 0.00 0.00 36.29 4.94
2773 7601 2.162681 GACCACAATCCACTGAAAGGG 58.837 52.381 0.00 0.00 39.30 3.95
2774 7602 2.162681 GGACCACAATCCACTGAAAGG 58.837 52.381 0.00 0.00 39.30 3.11
2775 7603 3.077359 GAGGACCACAATCCACTGAAAG 58.923 50.000 0.00 0.00 41.73 2.62
2776 7604 2.441375 TGAGGACCACAATCCACTGAAA 59.559 45.455 0.00 0.00 41.73 2.69
2777 7605 2.054021 TGAGGACCACAATCCACTGAA 58.946 47.619 0.00 0.00 41.73 3.02
2778 7606 1.347707 GTGAGGACCACAATCCACTGA 59.652 52.381 0.00 0.00 45.03 3.41
2779 7607 1.813513 GTGAGGACCACAATCCACTG 58.186 55.000 0.00 0.00 45.03 3.66
2788 7616 0.610174 TCTGAGCATGTGAGGACCAC 59.390 55.000 0.00 0.00 45.88 4.16
2789 7617 0.900421 CTCTGAGCATGTGAGGACCA 59.100 55.000 0.00 0.00 0.00 4.02
2790 7618 3.756739 CTCTGAGCATGTGAGGACC 57.243 57.895 0.00 0.00 0.00 4.46
2793 7621 0.743701 GTGCCTCTGAGCATGTGAGG 60.744 60.000 16.41 16.41 46.24 3.86
2794 7622 0.743701 GGTGCCTCTGAGCATGTGAG 60.744 60.000 0.00 0.00 46.24 3.51
2795 7623 1.196766 AGGTGCCTCTGAGCATGTGA 61.197 55.000 0.00 0.00 46.24 3.58
2796 7624 1.025113 CAGGTGCCTCTGAGCATGTG 61.025 60.000 0.00 0.46 46.24 3.21
2797 7625 1.298993 CAGGTGCCTCTGAGCATGT 59.701 57.895 0.00 0.00 46.24 3.21
2798 7626 2.113433 GCAGGTGCCTCTGAGCATG 61.113 63.158 7.48 0.00 46.24 4.06
2799 7627 1.923006 ATGCAGGTGCCTCTGAGCAT 61.923 55.000 7.65 7.65 46.24 3.79
2800 7628 2.599757 ATGCAGGTGCCTCTGAGCA 61.600 57.895 7.48 3.90 41.46 4.26
2801 7629 2.113433 CATGCAGGTGCCTCTGAGC 61.113 63.158 7.48 0.00 41.18 4.26
2802 7630 2.113433 GCATGCAGGTGCCTCTGAG 61.113 63.158 14.21 0.00 41.18 3.35
2803 7631 2.045634 GCATGCAGGTGCCTCTGA 60.046 61.111 14.21 0.00 41.18 3.27
2804 7632 1.753078 ATGCATGCAGGTGCCTCTG 60.753 57.895 26.69 0.00 44.43 3.35
2805 7633 1.753078 CATGCATGCAGGTGCCTCT 60.753 57.895 26.69 3.09 44.43 3.69
2806 7634 1.725557 CTCATGCATGCAGGTGCCTC 61.726 60.000 29.43 0.00 44.43 4.70
2807 7635 1.753078 CTCATGCATGCAGGTGCCT 60.753 57.895 29.43 7.87 44.43 4.75
2808 7636 2.805546 CTCATGCATGCAGGTGCC 59.194 61.111 29.43 0.00 44.43 5.01
2809 7637 2.104331 GCTCATGCATGCAGGTGC 59.896 61.111 34.19 34.19 45.25 5.01
2810 7638 2.782222 GGGCTCATGCATGCAGGTG 61.782 63.158 29.43 27.29 41.91 4.00
2811 7639 2.441532 GGGCTCATGCATGCAGGT 60.442 61.111 29.43 10.28 41.91 4.00
2812 7640 2.016393 CTTGGGCTCATGCATGCAGG 62.016 60.000 25.78 25.78 41.91 4.85
2813 7641 1.035385 TCTTGGGCTCATGCATGCAG 61.035 55.000 26.69 19.08 41.91 4.41
2814 7642 0.396556 ATCTTGGGCTCATGCATGCA 60.397 50.000 25.04 25.04 41.91 3.96
2815 7643 0.750850 AATCTTGGGCTCATGCATGC 59.249 50.000 22.25 11.82 41.91 4.06
2816 7644 1.538204 GCAATCTTGGGCTCATGCATG 60.538 52.381 21.07 21.07 41.91 4.06
2817 7645 0.750850 GCAATCTTGGGCTCATGCAT 59.249 50.000 5.00 0.00 41.91 3.96
2818 7646 1.324740 GGCAATCTTGGGCTCATGCA 61.325 55.000 11.78 0.00 41.91 3.96
2819 7647 1.041447 AGGCAATCTTGGGCTCATGC 61.041 55.000 1.04 1.04 36.23 4.06
2820 7648 2.353357 TAGGCAATCTTGGGCTCATG 57.647 50.000 0.00 0.00 41.81 3.07
2821 7649 2.176364 ACATAGGCAATCTTGGGCTCAT 59.824 45.455 0.00 0.00 41.81 2.90
2822 7650 1.565759 ACATAGGCAATCTTGGGCTCA 59.434 47.619 0.00 0.00 41.81 4.26
2823 7651 2.355010 ACATAGGCAATCTTGGGCTC 57.645 50.000 0.00 0.00 41.81 4.70
2824 7652 2.834638 AACATAGGCAATCTTGGGCT 57.165 45.000 0.00 0.00 44.15 5.19
2825 7653 2.294512 GCTAACATAGGCAATCTTGGGC 59.705 50.000 0.00 0.00 0.00 5.36
2826 7654 3.554934 TGCTAACATAGGCAATCTTGGG 58.445 45.455 0.00 0.00 35.40 4.12
2827 7655 5.764686 TGTATGCTAACATAGGCAATCTTGG 59.235 40.000 0.00 0.00 39.44 3.61
2828 7656 6.866010 TGTATGCTAACATAGGCAATCTTG 57.134 37.500 0.00 0.00 39.44 3.02
2829 7657 7.226441 TGATGTATGCTAACATAGGCAATCTT 58.774 34.615 4.74 0.00 40.17 2.40
2830 7658 6.772605 TGATGTATGCTAACATAGGCAATCT 58.227 36.000 4.74 0.00 40.17 2.40
2831 7659 7.414873 CCATGATGTATGCTAACATAGGCAATC 60.415 40.741 0.00 0.00 40.17 2.67
2832 7660 6.376299 CCATGATGTATGCTAACATAGGCAAT 59.624 38.462 0.00 0.00 40.17 3.56
2833 7661 5.706833 CCATGATGTATGCTAACATAGGCAA 59.293 40.000 0.00 0.00 40.17 4.52
2834 7662 5.247862 CCATGATGTATGCTAACATAGGCA 58.752 41.667 0.00 0.00 40.17 4.75
2835 7663 4.095483 GCCATGATGTATGCTAACATAGGC 59.905 45.833 17.89 17.89 40.17 3.93
2836 7664 5.247862 TGCCATGATGTATGCTAACATAGG 58.752 41.667 0.00 8.20 40.17 2.57
2837 7665 6.168389 TCTGCCATGATGTATGCTAACATAG 58.832 40.000 0.00 0.00 40.17 2.23
2876 7921 0.475906 GGCCTCCTGTGCTCCATAAT 59.524 55.000 0.00 0.00 0.00 1.28
3207 8256 8.556194 GTCCCAGGAAACAAATGAAAATTTAAC 58.444 33.333 0.00 0.00 0.00 2.01
3210 8259 6.542005 GTGTCCCAGGAAACAAATGAAAATTT 59.458 34.615 1.87 0.00 32.80 1.82
3269 8318 6.038603 GCAAGACATAATCAATAGCACTTCCA 59.961 38.462 0.00 0.00 0.00 3.53
3561 8610 7.961940 TCTTATATTATGGGATGGAGGGAGTA 58.038 38.462 0.00 0.00 0.00 2.59
3562 8611 6.826727 TCTTATATTATGGGATGGAGGGAGT 58.173 40.000 0.00 0.00 0.00 3.85
3563 8612 7.569240 GTTCTTATATTATGGGATGGAGGGAG 58.431 42.308 0.00 0.00 0.00 4.30
3564 8613 6.156256 CGTTCTTATATTATGGGATGGAGGGA 59.844 42.308 0.00 0.00 0.00 4.20
3565 8614 6.070194 ACGTTCTTATATTATGGGATGGAGGG 60.070 42.308 0.00 0.00 0.00 4.30
3566 8615 6.947464 ACGTTCTTATATTATGGGATGGAGG 58.053 40.000 0.00 0.00 0.00 4.30
3567 8616 8.848474 AAACGTTCTTATATTATGGGATGGAG 57.152 34.615 0.00 0.00 0.00 3.86
3568 8617 9.635404 AAAAACGTTCTTATATTATGGGATGGA 57.365 29.630 0.00 0.00 0.00 3.41
3598 8647 9.233232 CCCATAATATAAGAACGTTTTTCAAGC 57.767 33.333 7.42 0.00 0.00 4.01
3601 8650 8.605746 CGTCCCATAATATAAGAACGTTTTTCA 58.394 33.333 7.42 0.00 0.00 2.69
3602 8651 8.066000 CCGTCCCATAATATAAGAACGTTTTTC 58.934 37.037 7.42 0.00 0.00 2.29
3603 8652 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3604 8653 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3605 8654 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3606 8655 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3607 8656 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3608 8657 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3609 8658 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3610 8659 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3611 8660 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3612 8661 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3613 8662 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3614 8663 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3615 8664 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3616 8665 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
3617 8666 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
3618 8667 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3619 8668 2.852714 TTTACTCCCTCCGTCCCATA 57.147 50.000 0.00 0.00 0.00 2.74
3620 8669 1.961133 TTTTACTCCCTCCGTCCCAT 58.039 50.000 0.00 0.00 0.00 4.00
3621 8670 1.732117 TTTTTACTCCCTCCGTCCCA 58.268 50.000 0.00 0.00 0.00 4.37
3622 8671 3.361281 AATTTTTACTCCCTCCGTCCC 57.639 47.619 0.00 0.00 0.00 4.46
3623 8672 7.400599 AAATTAATTTTTACTCCCTCCGTCC 57.599 36.000 7.64 0.00 0.00 4.79
3624 8673 8.301720 ACAAAATTAATTTTTACTCCCTCCGTC 58.698 33.333 20.92 0.00 37.86 4.79
3625 8674 8.185506 ACAAAATTAATTTTTACTCCCTCCGT 57.814 30.769 20.92 10.59 37.86 4.69
3654 8703 7.980662 TGATTCAAAAATTACATGGCATCGATT 59.019 29.630 0.00 0.00 0.00 3.34
3656 8705 6.861144 TGATTCAAAAATTACATGGCATCGA 58.139 32.000 0.00 0.00 0.00 3.59
3657 8706 7.703298 ATGATTCAAAAATTACATGGCATCG 57.297 32.000 0.00 0.00 0.00 3.84
3704 8757 4.560128 GCTCAGATAGTTGTCACTTGTCA 58.440 43.478 0.00 0.00 34.06 3.58
3705 8758 3.929610 GGCTCAGATAGTTGTCACTTGTC 59.070 47.826 0.00 0.00 34.06 3.18
3706 8759 3.580458 AGGCTCAGATAGTTGTCACTTGT 59.420 43.478 0.00 0.00 34.06 3.16
3707 8760 4.199432 AGGCTCAGATAGTTGTCACTTG 57.801 45.455 0.00 0.00 34.06 3.16
3708 8761 7.847711 ATATAGGCTCAGATAGTTGTCACTT 57.152 36.000 0.00 0.00 34.06 3.16
3709 8762 8.387039 TCTATATAGGCTCAGATAGTTGTCACT 58.613 37.037 9.89 0.00 36.99 3.41
3710 8763 8.568676 TCTATATAGGCTCAGATAGTTGTCAC 57.431 38.462 9.89 0.00 0.00 3.67
3750 8815 4.791974 CTTGTGAGAAGCTGAATTCAACC 58.208 43.478 9.88 3.74 0.00 3.77
3792 8857 8.197439 GCTTTGTTATAATAGGAATGCCTTGTT 58.803 33.333 0.00 0.00 43.90 2.83
3794 8859 7.715657 TGCTTTGTTATAATAGGAATGCCTTG 58.284 34.615 0.00 0.00 43.90 3.61
3795 8860 7.896383 TGCTTTGTTATAATAGGAATGCCTT 57.104 32.000 0.00 0.00 43.90 4.35
3812 8878 4.751060 CACATTGCAGGATAATGCTTTGT 58.249 39.130 0.00 1.54 46.63 2.83
3857 8923 3.989167 TGGTACAACATAAACGAACTCCG 59.011 43.478 0.00 0.00 39.31 4.63
3947 9013 1.736681 GTTGCTTTCTGCTGCCTAGAG 59.263 52.381 0.00 0.00 43.37 2.43
4090 9156 1.266989 CCAAAAGTCCGAACTGAAGGC 59.733 52.381 0.00 0.00 35.36 4.35
4133 9199 2.368875 AGGCTCCGATACCATGTAAAGG 59.631 50.000 0.00 0.00 0.00 3.11
4224 9290 1.780919 GTGGACAAAGGGCCCCTATAT 59.219 52.381 21.43 0.00 31.13 0.86
4226 9292 0.849094 TGTGGACAAAGGGCCCCTAT 60.849 55.000 21.43 1.24 31.13 2.57
4231 9297 2.863809 CCTATATGTGGACAAAGGGCC 58.136 52.381 0.00 0.00 0.00 5.80
4232 9298 2.158608 AGCCTATATGTGGACAAAGGGC 60.159 50.000 0.00 0.00 0.00 5.19
4233 9299 3.864789 AGCCTATATGTGGACAAAGGG 57.135 47.619 7.78 0.00 0.00 3.95
4234 9300 5.041191 AGAAGCCTATATGTGGACAAAGG 57.959 43.478 1.34 0.00 0.00 3.11
4235 9301 6.115446 TCAAGAAGCCTATATGTGGACAAAG 58.885 40.000 1.34 0.00 0.00 2.77
4253 9319 5.761205 AGACTCAGAGGTATAGCTCAAGAA 58.239 41.667 28.66 12.94 0.00 2.52
4351 9417 6.312399 ACGCAATCAAAAGTCAAACTGATA 57.688 33.333 0.00 0.00 0.00 2.15
4523 9590 6.281405 ACCAATCATAGTGGAAGAATCGTAC 58.719 40.000 0.00 0.00 39.62 3.67
4659 9726 3.378112 CAGTTGCTTGACTCAGACCAAAA 59.622 43.478 0.00 0.00 0.00 2.44
4928 9995 5.367937 AGGAGCAACAATCTATCTACACCAT 59.632 40.000 0.00 0.00 0.00 3.55
5048 10115 7.864379 CCATGTAAACATAGGAAGCAAATGATC 59.136 37.037 0.00 0.00 34.26 2.92
5218 10295 6.534475 AAATGCTCACACAATCCATACATT 57.466 33.333 0.00 0.00 0.00 2.71
5219 10296 6.534475 AAAATGCTCACACAATCCATACAT 57.466 33.333 0.00 0.00 0.00 2.29
5220 10297 5.391843 CGAAAATGCTCACACAATCCATACA 60.392 40.000 0.00 0.00 0.00 2.29
5221 10298 5.030295 CGAAAATGCTCACACAATCCATAC 58.970 41.667 0.00 0.00 0.00 2.39
5222 10299 4.699735 ACGAAAATGCTCACACAATCCATA 59.300 37.500 0.00 0.00 0.00 2.74
5223 10300 3.507233 ACGAAAATGCTCACACAATCCAT 59.493 39.130 0.00 0.00 0.00 3.41
5224 10301 2.884012 ACGAAAATGCTCACACAATCCA 59.116 40.909 0.00 0.00 0.00 3.41
5225 10302 3.236816 CACGAAAATGCTCACACAATCC 58.763 45.455 0.00 0.00 0.00 3.01
5226 10303 3.058293 TCCACGAAAATGCTCACACAATC 60.058 43.478 0.00 0.00 0.00 2.67
5227 10304 2.884012 TCCACGAAAATGCTCACACAAT 59.116 40.909 0.00 0.00 0.00 2.71
5228 10305 2.293170 TCCACGAAAATGCTCACACAA 58.707 42.857 0.00 0.00 0.00 3.33
5229 10306 1.960417 TCCACGAAAATGCTCACACA 58.040 45.000 0.00 0.00 0.00 3.72
5230 10307 2.855180 CATCCACGAAAATGCTCACAC 58.145 47.619 0.00 0.00 0.00 3.82
5231 10308 1.199789 GCATCCACGAAAATGCTCACA 59.800 47.619 11.51 0.00 43.87 3.58
5232 10309 1.199789 TGCATCCACGAAAATGCTCAC 59.800 47.619 16.98 0.00 46.64 3.51
5233 10310 1.532523 TGCATCCACGAAAATGCTCA 58.467 45.000 16.98 1.33 46.64 4.26
5234 10311 2.456989 CATGCATCCACGAAAATGCTC 58.543 47.619 16.98 0.00 46.64 4.26
5235 10312 1.135527 CCATGCATCCACGAAAATGCT 59.864 47.619 16.98 5.20 46.64 3.79
5236 10313 1.134753 TCCATGCATCCACGAAAATGC 59.865 47.619 0.00 11.76 46.68 3.56
5237 10314 3.377439 CATCCATGCATCCACGAAAATG 58.623 45.455 0.00 0.00 0.00 2.32
5238 10315 3.720949 CATCCATGCATCCACGAAAAT 57.279 42.857 0.00 0.00 0.00 1.82
5251 10328 0.384309 GCTCACACCATGCATCCATG 59.616 55.000 0.00 0.00 46.70 3.66
5252 10329 0.033894 TGCTCACACCATGCATCCAT 60.034 50.000 0.00 0.00 0.00 3.41
5253 10330 0.033894 ATGCTCACACCATGCATCCA 60.034 50.000 0.00 0.00 42.92 3.41
5254 10331 1.108776 AATGCTCACACCATGCATCC 58.891 50.000 0.00 0.00 45.29 3.51
5255 10332 2.953466 AAATGCTCACACCATGCATC 57.047 45.000 0.00 0.00 45.29 3.91
5257 10334 1.068402 CGAAAATGCTCACACCATGCA 60.068 47.619 0.00 0.00 41.13 3.96
5258 10335 1.068333 ACGAAAATGCTCACACCATGC 60.068 47.619 0.00 0.00 0.00 4.06
5259 10336 2.995466 ACGAAAATGCTCACACCATG 57.005 45.000 0.00 0.00 0.00 3.66
5260 10337 5.401550 CATTTACGAAAATGCTCACACCAT 58.598 37.500 0.00 0.00 43.98 3.55
5261 10338 4.793071 CATTTACGAAAATGCTCACACCA 58.207 39.130 0.00 0.00 43.98 4.17
5271 10348 6.096705 TGCTCAATCCATCCATTTACGAAAAT 59.903 34.615 0.00 0.00 35.65 1.82
5272 10349 5.417266 TGCTCAATCCATCCATTTACGAAAA 59.583 36.000 0.00 0.00 0.00 2.29
5273 10350 4.946772 TGCTCAATCCATCCATTTACGAAA 59.053 37.500 0.00 0.00 0.00 3.46
5274 10351 4.522114 TGCTCAATCCATCCATTTACGAA 58.478 39.130 0.00 0.00 0.00 3.85
5275 10352 4.149511 TGCTCAATCCATCCATTTACGA 57.850 40.909 0.00 0.00 0.00 3.43
5276 10353 5.443185 AATGCTCAATCCATCCATTTACG 57.557 39.130 0.00 0.00 0.00 3.18
5277 10354 6.418819 CGAAAATGCTCAATCCATCCATTTAC 59.581 38.462 0.00 0.00 35.69 2.01
5278 10355 6.096705 ACGAAAATGCTCAATCCATCCATTTA 59.903 34.615 0.00 0.00 35.69 1.40
5279 10356 5.105228 ACGAAAATGCTCAATCCATCCATTT 60.105 36.000 0.00 0.00 37.62 2.32
5280 10357 4.403432 ACGAAAATGCTCAATCCATCCATT 59.597 37.500 0.00 0.00 0.00 3.16
5281 10358 3.956199 ACGAAAATGCTCAATCCATCCAT 59.044 39.130 0.00 0.00 0.00 3.41
5282 10359 3.355378 ACGAAAATGCTCAATCCATCCA 58.645 40.909 0.00 0.00 0.00 3.41
5283 10360 5.499139 TTACGAAAATGCTCAATCCATCC 57.501 39.130 0.00 0.00 0.00 3.51
5284 10361 7.385668 CATTTACGAAAATGCTCAATCCATC 57.614 36.000 0.00 0.00 43.98 3.51
5296 10373 8.746052 TGTAAGATCCATCCATTTACGAAAAT 57.254 30.769 0.00 0.00 35.65 1.82
5297 10374 7.827236 ACTGTAAGATCCATCCATTTACGAAAA 59.173 33.333 0.00 0.00 37.43 2.29
5298 10375 7.335627 ACTGTAAGATCCATCCATTTACGAAA 58.664 34.615 0.00 0.00 37.43 3.46
5299 10376 6.884832 ACTGTAAGATCCATCCATTTACGAA 58.115 36.000 0.00 0.00 37.43 3.85
5300 10377 6.479972 ACTGTAAGATCCATCCATTTACGA 57.520 37.500 0.00 0.00 37.43 3.43
5301 10378 8.307483 AGATACTGTAAGATCCATCCATTTACG 58.693 37.037 0.00 0.00 37.43 3.18
5302 10379 9.429359 CAGATACTGTAAGATCCATCCATTTAC 57.571 37.037 0.00 0.00 37.43 2.01
5303 10380 9.379770 TCAGATACTGTAAGATCCATCCATTTA 57.620 33.333 0.00 0.00 37.43 1.40
5304 10381 8.267620 TCAGATACTGTAAGATCCATCCATTT 57.732 34.615 0.00 0.00 37.43 2.32
5305 10382 7.862274 TCAGATACTGTAAGATCCATCCATT 57.138 36.000 0.00 0.00 37.43 3.16
5306 10383 7.862274 TTCAGATACTGTAAGATCCATCCAT 57.138 36.000 0.00 0.00 37.43 3.41
5307 10384 7.862274 ATTCAGATACTGTAAGATCCATCCA 57.138 36.000 0.00 0.00 37.43 3.41
5308 10385 8.997323 CAAATTCAGATACTGTAAGATCCATCC 58.003 37.037 0.00 0.00 37.43 3.51
5309 10386 8.997323 CCAAATTCAGATACTGTAAGATCCATC 58.003 37.037 0.00 0.00 37.43 3.51
5310 10387 8.497745 ACCAAATTCAGATACTGTAAGATCCAT 58.502 33.333 0.00 0.00 37.43 3.41
5311 10388 7.861629 ACCAAATTCAGATACTGTAAGATCCA 58.138 34.615 0.00 0.00 37.43 3.41
5312 10389 9.832445 TTACCAAATTCAGATACTGTAAGATCC 57.168 33.333 0.00 0.00 37.43 3.36
5317 10394 9.967451 TCCATTTACCAAATTCAGATACTGTAA 57.033 29.630 0.00 0.00 32.61 2.41
5319 10396 8.906867 CATCCATTTACCAAATTCAGATACTGT 58.093 33.333 0.00 0.00 32.61 3.55
5320 10397 7.864379 GCATCCATTTACCAAATTCAGATACTG 59.136 37.037 0.00 0.00 0.00 2.74
5321 10398 7.560991 TGCATCCATTTACCAAATTCAGATACT 59.439 33.333 0.00 0.00 0.00 2.12
5322 10399 7.715657 TGCATCCATTTACCAAATTCAGATAC 58.284 34.615 0.00 0.00 0.00 2.24
5323 10400 7.014518 CCTGCATCCATTTACCAAATTCAGATA 59.985 37.037 0.00 0.00 0.00 1.98
5324 10401 6.183360 CCTGCATCCATTTACCAAATTCAGAT 60.183 38.462 0.00 0.00 0.00 2.90
5325 10402 5.127519 CCTGCATCCATTTACCAAATTCAGA 59.872 40.000 0.00 0.00 0.00 3.27
5326 10403 5.105228 ACCTGCATCCATTTACCAAATTCAG 60.105 40.000 0.00 0.00 0.00 3.02
5327 10404 4.776837 ACCTGCATCCATTTACCAAATTCA 59.223 37.500 0.00 0.00 0.00 2.57
5328 10405 5.111293 CACCTGCATCCATTTACCAAATTC 58.889 41.667 0.00 0.00 0.00 2.17
5329 10406 4.531732 ACACCTGCATCCATTTACCAAATT 59.468 37.500 0.00 0.00 0.00 1.82
5330 10407 4.081531 CACACCTGCATCCATTTACCAAAT 60.082 41.667 0.00 0.00 0.00 2.32
5331 10408 3.257873 CACACCTGCATCCATTTACCAAA 59.742 43.478 0.00 0.00 0.00 3.28
5332 10409 2.824936 CACACCTGCATCCATTTACCAA 59.175 45.455 0.00 0.00 0.00 3.67
5333 10410 2.040947 TCACACCTGCATCCATTTACCA 59.959 45.455 0.00 0.00 0.00 3.25
5334 10411 2.684881 CTCACACCTGCATCCATTTACC 59.315 50.000 0.00 0.00 0.00 2.85
5335 10412 2.098117 GCTCACACCTGCATCCATTTAC 59.902 50.000 0.00 0.00 0.00 2.01
5336 10413 2.290832 TGCTCACACCTGCATCCATTTA 60.291 45.455 0.00 0.00 33.94 1.40
5337 10414 1.180029 GCTCACACCTGCATCCATTT 58.820 50.000 0.00 0.00 0.00 2.32
5338 10415 0.038599 TGCTCACACCTGCATCCATT 59.961 50.000 0.00 0.00 33.94 3.16
5339 10416 0.257905 ATGCTCACACCTGCATCCAT 59.742 50.000 0.00 0.00 45.50 3.41
5340 10417 1.687014 ATGCTCACACCTGCATCCA 59.313 52.632 0.00 0.00 45.50 3.41
5341 10418 4.651867 ATGCTCACACCTGCATCC 57.348 55.556 0.00 0.00 45.50 3.51
5344 10421 0.592637 CGAAAATGCTCACACCTGCA 59.407 50.000 0.00 0.00 43.67 4.41
5345 10422 0.593128 ACGAAAATGCTCACACCTGC 59.407 50.000 0.00 0.00 0.00 4.85
5346 10423 1.069022 CCACGAAAATGCTCACACCTG 60.069 52.381 0.00 0.00 0.00 4.00
5347 10424 1.202758 TCCACGAAAATGCTCACACCT 60.203 47.619 0.00 0.00 0.00 4.00
5348 10425 1.234821 TCCACGAAAATGCTCACACC 58.765 50.000 0.00 0.00 0.00 4.16
5349 10426 2.855180 CATCCACGAAAATGCTCACAC 58.145 47.619 0.00 0.00 0.00 3.82
5350 10427 1.199789 GCATCCACGAAAATGCTCACA 59.800 47.619 11.51 0.00 43.87 3.58
5351 10428 1.199789 TGCATCCACGAAAATGCTCAC 59.800 47.619 16.98 0.00 46.64 3.51
5352 10429 1.532523 TGCATCCACGAAAATGCTCA 58.467 45.000 16.98 1.33 46.64 4.26
5353 10430 2.456989 CATGCATCCACGAAAATGCTC 58.543 47.619 16.98 0.00 46.64 4.26
5354 10431 1.135527 CCATGCATCCACGAAAATGCT 59.864 47.619 16.98 5.20 46.64 3.79
5355 10432 1.134753 TCCATGCATCCACGAAAATGC 59.865 47.619 0.00 11.76 46.68 3.56
5356 10433 3.720949 ATCCATGCATCCACGAAAATG 57.279 42.857 0.00 0.00 0.00 2.32
5357 10434 3.448301 ACAATCCATGCATCCACGAAAAT 59.552 39.130 0.00 0.00 0.00 1.82
5358 10435 2.824936 ACAATCCATGCATCCACGAAAA 59.175 40.909 0.00 0.00 0.00 2.29
5359 10436 2.164017 CACAATCCATGCATCCACGAAA 59.836 45.455 0.00 0.00 0.00 3.46
5360 10437 1.744522 CACAATCCATGCATCCACGAA 59.255 47.619 0.00 0.00 0.00 3.85
5361 10438 1.339920 ACACAATCCATGCATCCACGA 60.340 47.619 0.00 0.00 0.00 4.35
5362 10439 1.097232 ACACAATCCATGCATCCACG 58.903 50.000 0.00 0.00 0.00 4.94
5363 10440 2.231964 ACAACACAATCCATGCATCCAC 59.768 45.455 0.00 0.00 0.00 4.02
5364 10441 2.492881 GACAACACAATCCATGCATCCA 59.507 45.455 0.00 0.00 0.00 3.41
5365 10442 2.756760 AGACAACACAATCCATGCATCC 59.243 45.455 0.00 0.00 0.00 3.51
5366 10443 3.441222 TGAGACAACACAATCCATGCATC 59.559 43.478 0.00 0.00 0.00 3.91
5367 10444 3.423749 TGAGACAACACAATCCATGCAT 58.576 40.909 0.00 0.00 0.00 3.96
5368 10445 2.815503 CTGAGACAACACAATCCATGCA 59.184 45.455 0.00 0.00 0.00 3.96
5369 10446 2.816087 ACTGAGACAACACAATCCATGC 59.184 45.455 0.00 0.00 0.00 4.06
5370 10447 4.276678 ACAACTGAGACAACACAATCCATG 59.723 41.667 0.00 0.00 0.00 3.66
5371 10448 4.276678 CACAACTGAGACAACACAATCCAT 59.723 41.667 0.00 0.00 0.00 3.41
5372 10449 3.627123 CACAACTGAGACAACACAATCCA 59.373 43.478 0.00 0.00 0.00 3.41
5500 10577 7.691213 TGGACCCTCTATTACACAAAATACAA 58.309 34.615 0.00 0.00 0.00 2.41
5565 10642 6.723298 TCCCAACTCTAAATTGCTTGAAAA 57.277 33.333 0.00 0.00 0.00 2.29
5597 10674 3.186409 ACGCATTATCACGCATTATCCAC 59.814 43.478 0.00 0.00 0.00 4.02
5600 10677 6.009474 CACTTACGCATTATCACGCATTATC 58.991 40.000 0.00 0.00 0.00 1.75
5601 10678 5.614668 GCACTTACGCATTATCACGCATTAT 60.615 40.000 0.00 0.00 0.00 1.28
5602 10679 4.318475 GCACTTACGCATTATCACGCATTA 60.318 41.667 0.00 0.00 0.00 1.90
5603 10680 3.546020 GCACTTACGCATTATCACGCATT 60.546 43.478 0.00 0.00 0.00 3.56
5604 10681 2.032894 GCACTTACGCATTATCACGCAT 60.033 45.455 0.00 0.00 0.00 4.73
5605 10682 1.326245 GCACTTACGCATTATCACGCA 59.674 47.619 0.00 0.00 0.00 5.24
5606 10683 1.332904 GGCACTTACGCATTATCACGC 60.333 52.381 0.00 0.00 0.00 5.34
5607 10684 1.071502 CGGCACTTACGCATTATCACG 60.072 52.381 0.00 0.00 0.00 4.35
5608 10685 1.931172 ACGGCACTTACGCATTATCAC 59.069 47.619 0.00 0.00 34.00 3.06
5609 10686 2.303163 ACGGCACTTACGCATTATCA 57.697 45.000 0.00 0.00 34.00 2.15
5638 10715 7.771361 TGACTGGTTTTCTCAACACTTGTTATA 59.229 33.333 0.00 0.00 36.32 0.98
5690 10767 1.423721 CGACACATCTGCCATGACCG 61.424 60.000 0.00 0.00 0.00 4.79
5691 10768 0.391661 ACGACACATCTGCCATGACC 60.392 55.000 0.00 0.00 0.00 4.02
5692 10769 1.129251 CAACGACACATCTGCCATGAC 59.871 52.381 0.00 0.00 0.00 3.06
5693 10770 1.001860 TCAACGACACATCTGCCATGA 59.998 47.619 0.00 0.00 0.00 3.07
5694 10771 1.441738 TCAACGACACATCTGCCATG 58.558 50.000 0.00 0.00 0.00 3.66
5695 10772 2.408271 ATCAACGACACATCTGCCAT 57.592 45.000 0.00 0.00 0.00 4.40
5696 10773 2.076100 GAATCAACGACACATCTGCCA 58.924 47.619 0.00 0.00 0.00 4.92
5697 10774 1.398390 GGAATCAACGACACATCTGCC 59.602 52.381 0.00 0.00 0.00 4.85
5698 10775 2.094894 CAGGAATCAACGACACATCTGC 59.905 50.000 0.00 0.00 0.00 4.26
5699 10776 2.674852 CCAGGAATCAACGACACATCTG 59.325 50.000 0.00 0.00 0.00 2.90
5700 10777 2.355108 CCCAGGAATCAACGACACATCT 60.355 50.000 0.00 0.00 0.00 2.90
5701 10778 2.009774 CCCAGGAATCAACGACACATC 58.990 52.381 0.00 0.00 0.00 3.06
5702 10779 1.950484 GCCCAGGAATCAACGACACAT 60.950 52.381 0.00 0.00 0.00 3.21
5703 10780 0.605319 GCCCAGGAATCAACGACACA 60.605 55.000 0.00 0.00 0.00 3.72
5704 10781 0.605319 TGCCCAGGAATCAACGACAC 60.605 55.000 0.00 0.00 0.00 3.67
5705 10782 0.327924 ATGCCCAGGAATCAACGACA 59.672 50.000 0.00 0.00 0.00 4.35
5706 10783 1.017387 GATGCCCAGGAATCAACGAC 58.983 55.000 0.00 0.00 30.57 4.34
5707 10784 0.107214 GGATGCCCAGGAATCAACGA 60.107 55.000 6.99 0.00 31.79 3.85
5708 10785 0.394216 TGGATGCCCAGGAATCAACG 60.394 55.000 6.99 0.00 37.58 4.10
5709 10786 3.594453 TGGATGCCCAGGAATCAAC 57.406 52.632 6.99 0.00 37.58 3.18
5734 10811 2.439701 CCATGGCCACAGGAGCAG 60.440 66.667 19.13 0.00 0.00 4.24
5735 10812 4.746309 GCCATGGCCACAGGAGCA 62.746 66.667 27.24 0.00 34.56 4.26
5736 10813 4.746309 TGCCATGGCCACAGGAGC 62.746 66.667 33.44 16.64 41.09 4.70
5737 10814 2.280404 ATCTGCCATGGCCACAGGAG 62.280 60.000 33.44 22.15 41.09 3.69
5738 10815 2.311070 ATCTGCCATGGCCACAGGA 61.311 57.895 33.44 21.59 41.09 3.86
5739 10816 2.125326 CATCTGCCATGGCCACAGG 61.125 63.158 33.44 19.47 41.09 4.00
5771 10858 1.675310 CGCTTGTCCCTTCATGGCA 60.675 57.895 0.00 0.00 0.00 4.92
5778 10865 1.600916 GCAACTCCGCTTGTCCCTT 60.601 57.895 0.00 0.00 0.00 3.95
5838 10925 0.661020 CGCAGAGGTTGAACCGTTTT 59.339 50.000 8.98 0.00 44.90 2.43
5893 10980 2.483889 CGCTCTAGAAAGTTCCCCATCC 60.484 54.545 0.00 0.00 0.00 3.51
6138 12912 1.367346 TCCCCACACAGCTCCATAAA 58.633 50.000 0.00 0.00 0.00 1.40
6179 12953 1.547675 GGGTCCACCTTCAATTGCTCA 60.548 52.381 0.00 0.00 35.85 4.26
6186 12960 2.221299 CGAGGGGGTCCACCTTCAA 61.221 63.158 15.94 0.00 38.79 2.69
6211 12985 0.774276 TGGAGGTAATGCCACAACCA 59.226 50.000 0.58 0.00 40.61 3.67
6313 13087 0.179004 AGAAACCACGTGCCCAATGA 60.179 50.000 10.91 0.00 0.00 2.57
6330 13104 3.676049 GCGACAACCACATCATCTACAGA 60.676 47.826 0.00 0.00 0.00 3.41
6337 13111 0.960364 GGGTGCGACAACCACATCAT 60.960 55.000 8.77 0.00 41.64 2.45
6385 13160 2.880890 AGCACAAATCTCTTTCGCTGTT 59.119 40.909 0.00 0.00 31.89 3.16
6387 13162 3.549299 AAGCACAAATCTCTTTCGCTG 57.451 42.857 0.00 0.00 32.90 5.18
6405 13180 1.736032 CGTCCAAGGTAGCGAGGAAAG 60.736 57.143 9.49 4.61 0.00 2.62
6427 13202 0.533491 TGTCGGATCCAGGGTTAACG 59.467 55.000 13.41 0.00 0.00 3.18
6429 13204 2.235402 GTCTTGTCGGATCCAGGGTTAA 59.765 50.000 13.41 0.00 0.00 2.01
6490 13265 5.326200 GAGAGCTAGTAGCACCACTTTTA 57.674 43.478 23.77 0.00 45.56 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.