Multiple sequence alignment - TraesCS2A01G262200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G262200 chr2A 100.000 4325 0 0 1 4325 413339983 413335659 0.000000e+00 7987.0
1 TraesCS2A01G262200 chr2A 81.928 498 39 19 1 458 373419361 373419847 1.470000e-99 374.0
2 TraesCS2A01G262200 chr2B 94.922 1733 63 12 2121 3842 386286993 386288711 0.000000e+00 2689.0
3 TraesCS2A01G262200 chr2B 93.450 916 47 7 457 1367 386285424 386286331 0.000000e+00 1347.0
4 TraesCS2A01G262200 chr2B 86.957 483 35 8 1370 1852 386286372 386286826 6.410000e-143 518.0
5 TraesCS2A01G262200 chr2B 89.125 423 14 7 1604 1998 386286576 386286994 8.350000e-137 497.0
6 TraesCS2A01G262200 chr2B 97.368 38 1 0 3891 3928 386288738 386288775 1.000000e-06 65.8
7 TraesCS2A01G262200 chr2D 92.652 1674 62 19 2121 3785 318324255 318325876 0.000000e+00 2353.0
8 TraesCS2A01G262200 chr2D 91.135 925 49 17 457 1367 318322659 318323564 0.000000e+00 1223.0
9 TraesCS2A01G262200 chr2D 91.743 654 27 4 1370 1998 318323605 318324256 0.000000e+00 883.0
10 TraesCS2A01G262200 chr2D 87.931 290 31 1 4031 4320 318326013 318326298 5.360000e-89 339.0
11 TraesCS2A01G262200 chr2D 95.556 135 5 1 1990 2123 340252735 340252869 9.420000e-52 215.0
12 TraesCS2A01G262200 chr2D 88.060 67 3 2 3848 3909 318325925 318325991 1.670000e-09 75.0
13 TraesCS2A01G262200 chr1B 78.601 486 68 24 2 458 469622739 469622261 5.470000e-74 289.0
14 TraesCS2A01G262200 chr1B 93.750 144 8 1 1992 2134 571434294 571434437 9.420000e-52 215.0
15 TraesCS2A01G262200 chr6D 95.714 140 5 1 1987 2125 272859364 272859225 1.570000e-54 224.0
16 TraesCS2A01G262200 chr6B 95.683 139 4 2 1997 2134 226196661 226196524 5.630000e-54 222.0
17 TraesCS2A01G262200 chr6B 78.977 176 20 11 85 245 2933104 2932931 2.130000e-18 104.0
18 TraesCS2A01G262200 chr5A 96.970 132 3 1 1993 2123 135538574 135538705 2.020000e-53 220.0
19 TraesCS2A01G262200 chr3D 95.620 137 5 1 1997 2132 496172756 496172892 7.280000e-53 219.0
20 TraesCS2A01G262200 chr3D 92.174 115 9 0 344 458 547500364 547500478 3.460000e-36 163.0
21 TraesCS2A01G262200 chr4A 94.928 138 5 2 1992 2127 729151837 729151974 9.420000e-52 215.0
22 TraesCS2A01G262200 chr4A 92.053 151 9 3 1977 2126 701083845 701083993 4.380000e-50 209.0
23 TraesCS2A01G262200 chr7A 93.103 145 8 2 1997 2140 330447063 330446920 1.220000e-50 211.0
24 TraesCS2A01G262200 chr1A 91.818 110 9 0 344 453 549139788 549139679 2.080000e-33 154.0
25 TraesCS2A01G262200 chr1D 87.931 116 14 0 343 458 266414070 266414185 2.100000e-28 137.0
26 TraesCS2A01G262200 chr6A 87.931 116 12 2 344 459 608127579 608127692 7.540000e-28 135.0
27 TraesCS2A01G262200 chr4B 87.826 115 12 2 344 458 466932276 466932388 2.710000e-27 134.0
28 TraesCS2A01G262200 chr4B 97.872 47 1 0 182 228 25964784 25964830 9.970000e-12 82.4
29 TraesCS2A01G262200 chr3A 88.136 118 6 6 344 458 575563071 575563183 2.710000e-27 134.0
30 TraesCS2A01G262200 chr3A 87.826 115 11 1 344 458 154734779 154734668 9.760000e-27 132.0
31 TraesCS2A01G262200 chr5B 87.719 114 12 2 345 458 647355253 647355142 9.760000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G262200 chr2A 413335659 413339983 4324 True 7987.00 7987 100.0000 1 4325 1 chr2A.!!$R1 4324
1 TraesCS2A01G262200 chr2B 386285424 386288775 3351 False 1023.36 2689 92.3644 457 3928 5 chr2B.!!$F1 3471
2 TraesCS2A01G262200 chr2D 318322659 318326298 3639 False 974.60 2353 90.3042 457 4320 5 chr2D.!!$F2 3863

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 65 0.179045 CCGTAGGCTTTGATGGAGGG 60.179 60.0 0.00 0.0 46.14 4.30 F
841 851 0.179100 AGCGCGTGTTGATAGAGCAT 60.179 50.0 8.43 0.0 33.18 3.79 F
2002 2085 0.107945 CTCTGCTGCCAACTACTCCC 60.108 60.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1402 1457 1.594194 TTGCATTAACGCAGCCCCAG 61.594 55.000 0.0 0.0 44.14 4.45 R
2100 2183 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.0 0.0 0.00 2.17 R
3986 4100 0.039035 TTTTGGATTCGAGGGGTGGG 59.961 55.000 0.0 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.906757 CTGCTGCTGAACGACTAGAG 58.093 55.000 0.00 0.00 0.00 2.43
20 21 1.470494 CTGCTGCTGAACGACTAGAGA 59.530 52.381 0.00 0.00 0.00 3.10
21 22 2.095461 TGCTGCTGAACGACTAGAGAT 58.905 47.619 0.00 0.00 0.00 2.75
22 23 2.493675 TGCTGCTGAACGACTAGAGATT 59.506 45.455 0.00 0.00 0.00 2.40
23 24 2.857152 GCTGCTGAACGACTAGAGATTG 59.143 50.000 0.00 0.00 0.00 2.67
24 25 3.443037 CTGCTGAACGACTAGAGATTGG 58.557 50.000 0.00 0.00 0.00 3.16
25 26 2.197577 GCTGAACGACTAGAGATTGGC 58.802 52.381 0.00 0.00 0.00 4.52
26 27 2.159170 GCTGAACGACTAGAGATTGGCT 60.159 50.000 0.00 0.00 0.00 4.75
27 28 3.066900 GCTGAACGACTAGAGATTGGCTA 59.933 47.826 0.00 0.00 0.00 3.93
28 29 4.602995 CTGAACGACTAGAGATTGGCTAC 58.397 47.826 0.00 0.00 0.00 3.58
29 30 4.270834 TGAACGACTAGAGATTGGCTACT 58.729 43.478 0.00 0.00 0.00 2.57
30 31 4.096532 TGAACGACTAGAGATTGGCTACTG 59.903 45.833 0.00 0.00 0.00 2.74
31 32 3.887352 ACGACTAGAGATTGGCTACTGA 58.113 45.455 0.00 0.00 0.00 3.41
32 33 3.880490 ACGACTAGAGATTGGCTACTGAG 59.120 47.826 0.00 0.00 0.00 3.35
41 42 2.875485 GCTACTGAGCGACACCGA 59.125 61.111 0.00 0.00 39.39 4.69
42 43 1.514443 GCTACTGAGCGACACCGAC 60.514 63.158 0.00 0.00 39.39 4.79
43 44 1.226046 CTACTGAGCGACACCGACG 60.226 63.158 0.00 0.00 38.22 5.12
44 45 2.579241 CTACTGAGCGACACCGACGG 62.579 65.000 13.61 13.61 38.22 4.79
50 51 4.824166 CGACACCGACGGCCGTAG 62.824 72.222 34.36 31.36 38.22 3.51
63 64 3.386543 CCGTAGGCTTTGATGGAGG 57.613 57.895 0.00 0.00 46.14 4.30
64 65 0.179045 CCGTAGGCTTTGATGGAGGG 60.179 60.000 0.00 0.00 46.14 4.30
65 66 0.815615 CGTAGGCTTTGATGGAGGGC 60.816 60.000 0.00 0.00 0.00 5.19
66 67 0.815615 GTAGGCTTTGATGGAGGGCG 60.816 60.000 0.00 0.00 0.00 6.13
67 68 1.983119 TAGGCTTTGATGGAGGGCGG 61.983 60.000 0.00 0.00 0.00 6.13
68 69 2.272146 GCTTTGATGGAGGGCGGA 59.728 61.111 0.00 0.00 0.00 5.54
69 70 1.821332 GCTTTGATGGAGGGCGGAG 60.821 63.158 0.00 0.00 0.00 4.63
70 71 1.153086 CTTTGATGGAGGGCGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
71 72 2.615227 CTTTGATGGAGGGCGGAGGG 62.615 65.000 0.00 0.00 0.00 4.30
144 145 4.785453 CCGGGTCAAGGGAGCAGC 62.785 72.222 0.00 0.00 43.32 5.25
145 146 4.785453 CGGGTCAAGGGAGCAGCC 62.785 72.222 0.00 0.00 43.32 4.85
146 147 4.785453 GGGTCAAGGGAGCAGCCG 62.785 72.222 0.00 0.00 43.32 5.52
147 148 4.785453 GGTCAAGGGAGCAGCCGG 62.785 72.222 0.00 0.00 41.19 6.13
148 149 4.785453 GTCAAGGGAGCAGCCGGG 62.785 72.222 2.18 0.00 37.63 5.73
171 172 4.802051 CATGGGCACGGGGGAGTG 62.802 72.222 0.00 0.00 44.47 3.51
177 178 3.706373 CACGGGGGAGTGGTGGAG 61.706 72.222 0.00 0.00 38.40 3.86
182 183 3.775654 GGGAGTGGTGGAGCCGAG 61.776 72.222 0.00 0.00 41.21 4.63
183 184 3.775654 GGAGTGGTGGAGCCGAGG 61.776 72.222 0.00 0.00 41.21 4.63
184 185 3.775654 GAGTGGTGGAGCCGAGGG 61.776 72.222 0.00 0.00 41.21 4.30
220 221 3.787001 GGAAGGGGAGGCGGTCTG 61.787 72.222 0.00 0.00 0.00 3.51
221 222 3.787001 GAAGGGGAGGCGGTCTGG 61.787 72.222 0.00 0.00 0.00 3.86
250 251 3.110178 CGACCGGCGAGGAACAAC 61.110 66.667 9.30 0.00 45.00 3.32
251 252 3.110178 GACCGGCGAGGAACAACG 61.110 66.667 9.30 0.00 45.00 4.10
256 257 2.813908 GCGAGGAACAACGGCGAT 60.814 61.111 16.62 0.00 0.00 4.58
257 258 3.081133 CGAGGAACAACGGCGATG 58.919 61.111 16.62 16.22 0.00 3.84
258 259 1.445410 CGAGGAACAACGGCGATGA 60.445 57.895 24.15 0.00 0.00 2.92
259 260 1.413767 CGAGGAACAACGGCGATGAG 61.414 60.000 24.15 7.57 0.00 2.90
260 261 1.079127 AGGAACAACGGCGATGAGG 60.079 57.895 24.15 5.39 0.00 3.86
261 262 2.750888 GGAACAACGGCGATGAGGC 61.751 63.158 24.15 11.37 42.76 4.70
277 278 4.838486 GCGAGGGCGTCAGACGAG 62.838 72.222 27.29 11.90 46.05 4.18
278 279 4.180946 CGAGGGCGTCAGACGAGG 62.181 72.222 27.29 6.00 46.05 4.63
279 280 3.827898 GAGGGCGTCAGACGAGGG 61.828 72.222 27.29 0.00 46.05 4.30
280 281 4.361971 AGGGCGTCAGACGAGGGA 62.362 66.667 27.29 0.00 46.05 4.20
281 282 4.131088 GGGCGTCAGACGAGGGAC 62.131 72.222 27.29 8.04 46.05 4.46
286 287 3.104014 GTCAGACGAGGGACGAAAC 57.896 57.895 0.00 0.00 45.77 2.78
287 288 0.728466 GTCAGACGAGGGACGAAACG 60.728 60.000 0.00 0.00 45.77 3.60
288 289 0.886043 TCAGACGAGGGACGAAACGA 60.886 55.000 0.00 0.00 45.77 3.85
289 290 0.454620 CAGACGAGGGACGAAACGAG 60.455 60.000 0.00 0.00 45.77 4.18
290 291 1.154073 GACGAGGGACGAAACGAGG 60.154 63.158 0.00 0.00 45.77 4.63
291 292 1.580845 GACGAGGGACGAAACGAGGA 61.581 60.000 0.00 0.00 45.77 3.71
292 293 1.174712 ACGAGGGACGAAACGAGGAA 61.175 55.000 0.00 0.00 45.77 3.36
293 294 0.731855 CGAGGGACGAAACGAGGAAC 60.732 60.000 0.00 0.00 45.77 3.62
303 304 2.202623 CGAGGAACGGAGGAAGCG 60.203 66.667 0.00 0.00 38.46 4.68
304 305 2.184579 GAGGAACGGAGGAAGCGG 59.815 66.667 0.00 0.00 0.00 5.52
305 306 2.283676 AGGAACGGAGGAAGCGGA 60.284 61.111 0.00 0.00 0.00 5.54
306 307 2.125633 GGAACGGAGGAAGCGGAC 60.126 66.667 0.00 0.00 0.00 4.79
307 308 2.506438 GAACGGAGGAAGCGGACG 60.506 66.667 0.00 0.00 0.00 4.79
308 309 2.986306 GAACGGAGGAAGCGGACGA 61.986 63.158 0.00 0.00 0.00 4.20
309 310 2.868999 GAACGGAGGAAGCGGACGAG 62.869 65.000 0.00 0.00 0.00 4.18
310 311 3.132139 CGGAGGAAGCGGACGAGA 61.132 66.667 0.00 0.00 0.00 4.04
311 312 2.490685 GGAGGAAGCGGACGAGAC 59.509 66.667 0.00 0.00 0.00 3.36
312 313 2.100603 GAGGAAGCGGACGAGACG 59.899 66.667 0.00 0.00 0.00 4.18
313 314 2.359602 AGGAAGCGGACGAGACGA 60.360 61.111 0.00 0.00 0.00 4.20
314 315 2.100603 GGAAGCGGACGAGACGAG 59.899 66.667 0.00 0.00 0.00 4.18
315 316 2.100603 GAAGCGGACGAGACGAGG 59.899 66.667 0.00 0.00 0.00 4.63
316 317 3.398353 GAAGCGGACGAGACGAGGG 62.398 68.421 0.00 0.00 0.00 4.30
317 318 4.719106 AGCGGACGAGACGAGGGT 62.719 66.667 0.00 0.00 0.00 4.34
318 319 3.745803 GCGGACGAGACGAGGGTT 61.746 66.667 0.00 0.00 0.00 4.11
319 320 2.178521 CGGACGAGACGAGGGTTG 59.821 66.667 0.00 0.00 0.00 3.77
320 321 2.623915 CGGACGAGACGAGGGTTGT 61.624 63.158 0.00 0.00 0.00 3.32
321 322 1.080705 GGACGAGACGAGGGTTGTG 60.081 63.158 0.00 0.00 0.00 3.33
322 323 1.080705 GACGAGACGAGGGTTGTGG 60.081 63.158 0.00 0.00 0.00 4.17
323 324 2.432628 CGAGACGAGGGTTGTGGC 60.433 66.667 0.00 0.00 0.00 5.01
324 325 2.047179 GAGACGAGGGTTGTGGCC 60.047 66.667 0.00 0.00 0.00 5.36
325 326 2.847234 AGACGAGGGTTGTGGCCA 60.847 61.111 0.00 0.00 0.00 5.36
326 327 2.185310 GAGACGAGGGTTGTGGCCAT 62.185 60.000 9.72 0.00 0.00 4.40
327 328 1.745489 GACGAGGGTTGTGGCCATC 60.745 63.158 9.72 3.12 36.11 3.51
329 330 2.438434 GAGGGTTGTGGCCATCGG 60.438 66.667 9.72 0.00 29.35 4.18
330 331 3.256960 AGGGTTGTGGCCATCGGT 61.257 61.111 9.72 0.00 0.00 4.69
331 332 1.906105 GAGGGTTGTGGCCATCGGTA 61.906 60.000 9.72 0.00 29.35 4.02
332 333 1.226262 GGGTTGTGGCCATCGGTAT 59.774 57.895 9.72 0.00 0.00 2.73
333 334 1.101049 GGGTTGTGGCCATCGGTATG 61.101 60.000 9.72 0.00 0.00 2.39
343 344 3.140325 CCATCGGTATGGTTATTGCCT 57.860 47.619 0.00 0.00 46.68 4.75
344 345 3.486383 CCATCGGTATGGTTATTGCCTT 58.514 45.455 0.00 0.00 46.68 4.35
345 346 4.647611 CCATCGGTATGGTTATTGCCTTA 58.352 43.478 0.00 0.00 46.68 2.69
346 347 5.253330 CCATCGGTATGGTTATTGCCTTAT 58.747 41.667 0.00 0.00 46.68 1.73
347 348 5.710099 CCATCGGTATGGTTATTGCCTTATT 59.290 40.000 0.00 0.00 46.68 1.40
348 349 6.349280 CCATCGGTATGGTTATTGCCTTATTG 60.349 42.308 0.00 0.00 46.68 1.90
349 350 5.067273 TCGGTATGGTTATTGCCTTATTGG 58.933 41.667 0.00 0.00 39.35 3.16
350 351 4.217550 CGGTATGGTTATTGCCTTATTGGG 59.782 45.833 0.00 0.00 36.00 4.12
360 361 3.912496 GCCTTATTGGGCCAATTTTCT 57.088 42.857 34.78 15.58 45.92 2.52
361 362 4.220693 GCCTTATTGGGCCAATTTTCTT 57.779 40.909 34.78 14.82 45.92 2.52
362 363 4.588899 GCCTTATTGGGCCAATTTTCTTT 58.411 39.130 34.78 14.06 45.92 2.52
363 364 5.009631 GCCTTATTGGGCCAATTTTCTTTT 58.990 37.500 34.78 13.30 45.92 2.27
364 365 5.476599 GCCTTATTGGGCCAATTTTCTTTTT 59.523 36.000 34.78 12.55 45.92 1.94
365 366 6.657117 GCCTTATTGGGCCAATTTTCTTTTTA 59.343 34.615 34.78 12.53 45.92 1.52
366 367 7.339212 GCCTTATTGGGCCAATTTTCTTTTTAT 59.661 33.333 34.78 11.26 45.92 1.40
367 368 8.676401 CCTTATTGGGCCAATTTTCTTTTTATG 58.324 33.333 34.78 15.74 35.54 1.90
368 369 8.572855 TTATTGGGCCAATTTTCTTTTTATGG 57.427 30.769 34.78 0.00 35.54 2.74
371 372 4.963276 GCCAATTTTCTTTTTATGGCCC 57.037 40.909 0.00 0.00 45.84 5.80
372 373 4.331108 GCCAATTTTCTTTTTATGGCCCA 58.669 39.130 0.00 0.00 45.84 5.36
373 374 4.395854 GCCAATTTTCTTTTTATGGCCCAG 59.604 41.667 0.00 0.00 45.84 4.45
374 375 5.559770 CCAATTTTCTTTTTATGGCCCAGT 58.440 37.500 0.00 0.00 0.00 4.00
375 376 6.003326 CCAATTTTCTTTTTATGGCCCAGTT 58.997 36.000 0.00 0.00 0.00 3.16
376 377 7.164803 CCAATTTTCTTTTTATGGCCCAGTTA 58.835 34.615 0.00 0.00 0.00 2.24
377 378 7.663493 CCAATTTTCTTTTTATGGCCCAGTTAA 59.337 33.333 0.00 0.00 0.00 2.01
378 379 9.061435 CAATTTTCTTTTTATGGCCCAGTTAAA 57.939 29.630 0.00 0.00 0.00 1.52
379 380 9.634021 AATTTTCTTTTTATGGCCCAGTTAAAA 57.366 25.926 0.00 3.22 0.00 1.52
380 381 9.634021 ATTTTCTTTTTATGGCCCAGTTAAAAA 57.366 25.926 12.25 12.25 35.01 1.94
381 382 9.634021 TTTTCTTTTTATGGCCCAGTTAAAAAT 57.366 25.926 12.93 0.00 35.45 1.82
382 383 8.840833 TTCTTTTTATGGCCCAGTTAAAAATC 57.159 30.769 12.93 0.00 35.45 2.17
383 384 7.390823 TCTTTTTATGGCCCAGTTAAAAATCC 58.609 34.615 12.93 0.00 35.45 3.01
384 385 6.688073 TTTTATGGCCCAGTTAAAAATCCA 57.312 33.333 0.00 0.00 0.00 3.41
385 386 6.882768 TTTATGGCCCAGTTAAAAATCCAT 57.117 33.333 0.00 0.00 36.82 3.41
386 387 7.979786 TTTATGGCCCAGTTAAAAATCCATA 57.020 32.000 0.00 0.00 34.91 2.74
387 388 7.979786 TTATGGCCCAGTTAAAAATCCATAA 57.020 32.000 0.00 6.69 40.62 1.90
388 389 5.930837 TGGCCCAGTTAAAAATCCATAAG 57.069 39.130 0.00 0.00 0.00 1.73
389 390 5.337788 TGGCCCAGTTAAAAATCCATAAGT 58.662 37.500 0.00 0.00 0.00 2.24
390 391 6.494952 TGGCCCAGTTAAAAATCCATAAGTA 58.505 36.000 0.00 0.00 0.00 2.24
391 392 7.129425 TGGCCCAGTTAAAAATCCATAAGTAT 58.871 34.615 0.00 0.00 0.00 2.12
392 393 8.282982 TGGCCCAGTTAAAAATCCATAAGTATA 58.717 33.333 0.00 0.00 0.00 1.47
393 394 9.309224 GGCCCAGTTAAAAATCCATAAGTATAT 57.691 33.333 0.00 0.00 0.00 0.86
402 403 8.788325 AAAATCCATAAGTATATAAGCGGACC 57.212 34.615 0.00 0.00 0.00 4.46
403 404 5.927281 TCCATAAGTATATAAGCGGACCC 57.073 43.478 0.00 0.00 0.00 4.46
404 405 5.335261 TCCATAAGTATATAAGCGGACCCA 58.665 41.667 0.00 0.00 0.00 4.51
405 406 5.781306 TCCATAAGTATATAAGCGGACCCAA 59.219 40.000 0.00 0.00 0.00 4.12
406 407 6.270463 TCCATAAGTATATAAGCGGACCCAAA 59.730 38.462 0.00 0.00 0.00 3.28
407 408 6.938030 CCATAAGTATATAAGCGGACCCAAAA 59.062 38.462 0.00 0.00 0.00 2.44
408 409 7.610305 CCATAAGTATATAAGCGGACCCAAAAT 59.390 37.037 0.00 0.00 0.00 1.82
409 410 8.665685 CATAAGTATATAAGCGGACCCAAAATC 58.334 37.037 0.00 0.00 0.00 2.17
410 411 5.557866 AGTATATAAGCGGACCCAAAATCC 58.442 41.667 0.00 0.00 0.00 3.01
411 412 2.067365 ATAAGCGGACCCAAAATCCC 57.933 50.000 0.00 0.00 31.99 3.85
412 413 0.699399 TAAGCGGACCCAAAATCCCA 59.301 50.000 0.00 0.00 31.99 4.37
413 414 0.611896 AAGCGGACCCAAAATCCCAG 60.612 55.000 0.00 0.00 31.99 4.45
414 415 2.052104 GCGGACCCAAAATCCCAGG 61.052 63.158 0.00 0.00 31.99 4.45
418 419 4.459199 CCCAAAATCCCAGGGTGG 57.541 61.111 5.01 5.55 37.81 4.61
445 446 2.933287 CACCCTGGCCACCCTGTA 60.933 66.667 0.00 0.00 0.00 2.74
446 447 2.610859 ACCCTGGCCACCCTGTAG 60.611 66.667 0.00 0.00 0.00 2.74
447 448 4.115199 CCCTGGCCACCCTGTAGC 62.115 72.222 0.00 0.00 0.00 3.58
448 449 3.011517 CCTGGCCACCCTGTAGCT 61.012 66.667 0.00 0.00 0.00 3.32
449 450 2.586792 CTGGCCACCCTGTAGCTC 59.413 66.667 0.00 0.00 0.00 4.09
450 451 3.009115 TGGCCACCCTGTAGCTCC 61.009 66.667 0.00 0.00 0.00 4.70
451 452 4.162690 GGCCACCCTGTAGCTCCG 62.163 72.222 0.00 0.00 0.00 4.63
452 453 4.840005 GCCACCCTGTAGCTCCGC 62.840 72.222 0.00 0.00 0.00 5.54
453 454 4.162690 CCACCCTGTAGCTCCGCC 62.163 72.222 0.00 0.00 0.00 6.13
454 455 3.390521 CACCCTGTAGCTCCGCCA 61.391 66.667 0.00 0.00 0.00 5.69
455 456 3.391382 ACCCTGTAGCTCCGCCAC 61.391 66.667 0.00 0.00 0.00 5.01
550 552 2.331166 TGGCTGACAGGGTTGTAGTAA 58.669 47.619 4.26 0.00 37.76 2.24
555 557 4.745783 GCTGACAGGGTTGTAGTAAAAGGT 60.746 45.833 4.26 0.00 37.76 3.50
572 574 1.377229 GTGATTCGGTGGGTTCCCA 59.623 57.895 6.46 6.46 0.00 4.37
576 578 0.251608 ATTCGGTGGGTTCCCAAAGG 60.252 55.000 12.54 5.11 37.91 3.11
578 580 1.303317 CGGTGGGTTCCCAAAGGAG 60.303 63.158 12.54 0.00 45.19 3.69
622 624 4.439153 CCGCTAGTGATGATGCAAATTTGT 60.439 41.667 19.03 0.26 0.00 2.83
674 676 6.988522 ACCTAAAATGTTTTGGTCACCATAC 58.011 36.000 0.00 0.00 31.53 2.39
676 678 7.234577 ACCTAAAATGTTTTGGTCACCATACAT 59.765 33.333 15.96 15.96 39.29 2.29
688 690 4.512944 GTCACCATACATCAATAGGCTGTG 59.487 45.833 0.00 0.00 0.00 3.66
728 730 1.990160 TTGGCCCAAGTGACCGAACT 61.990 55.000 0.00 0.00 0.00 3.01
742 744 5.009310 GTGACCGAACTGATTTTTAGGGTTT 59.991 40.000 0.00 0.00 0.00 3.27
756 758 8.820153 TTTTTAGGGTTTAGTGTTGGAGTTTA 57.180 30.769 0.00 0.00 0.00 2.01
793 795 8.641498 AGACATTGGAGATGTTCTAAACAAAT 57.359 30.769 0.00 0.00 45.86 2.32
841 851 0.179100 AGCGCGTGTTGATAGAGCAT 60.179 50.000 8.43 0.00 33.18 3.79
910 922 0.526524 CTCTACACGCACTAGGCTGC 60.527 60.000 0.00 0.00 41.67 5.25
936 948 2.503382 CCAAACCCCAACCCCAACG 61.503 63.158 0.00 0.00 0.00 4.10
956 968 1.474143 GCCAAGCCAGTAGATCCAGAC 60.474 57.143 0.00 0.00 0.00 3.51
1020 1032 2.186125 GTAACCTCCGCCCCTTCG 59.814 66.667 0.00 0.00 0.00 3.79
1235 1249 3.695830 TTTTCTACGCTGACTTCCCAT 57.304 42.857 0.00 0.00 0.00 4.00
1244 1258 4.156008 ACGCTGACTTCCCATATTGAAAAC 59.844 41.667 0.00 0.00 0.00 2.43
1250 1264 9.177608 CTGACTTCCCATATTGAAAACTCATTA 57.822 33.333 0.00 0.00 0.00 1.90
1297 1311 2.969443 ACGCGATTTGTCTTTCCTTG 57.031 45.000 15.93 0.00 0.00 3.61
1308 1323 5.592104 TGTCTTTCCTTGTTTTTCTTCCC 57.408 39.130 0.00 0.00 0.00 3.97
1363 1380 5.458891 CATGAAGCTGTACGGTACCTATAC 58.541 45.833 15.26 12.60 0.00 1.47
1382 1437 3.521947 ACGGTGCAGTAGTATCCTTTC 57.478 47.619 0.00 0.00 0.00 2.62
1401 1456 5.449588 CCTTTCAACATGGATTGGATTCTCG 60.450 44.000 0.00 0.00 0.00 4.04
1402 1457 2.945008 TCAACATGGATTGGATTCTCGC 59.055 45.455 0.00 0.00 0.00 5.03
1472 1527 5.823353 TGGTTTTGATCCGTAAACACTTTC 58.177 37.500 13.70 1.95 36.27 2.62
1488 1543 4.253685 CACTTTCGGATGTCCAACAGTAT 58.746 43.478 0.00 0.00 35.14 2.12
1526 1581 6.899089 TGATTGCAACCTCTGAATCCTATAA 58.101 36.000 0.00 0.00 0.00 0.98
1529 1584 6.499106 TGCAACCTCTGAATCCTATAATCA 57.501 37.500 0.00 0.00 0.00 2.57
1552 1607 6.599244 TCAGATTAAGCACGATTTGGAAGAAT 59.401 34.615 0.00 0.00 0.00 2.40
1575 1630 6.800072 TTGTGAAACTCCCCTTTTTGTATT 57.200 33.333 0.00 0.00 38.04 1.89
1576 1631 7.899648 TTGTGAAACTCCCCTTTTTGTATTA 57.100 32.000 0.00 0.00 38.04 0.98
1996 2079 1.273759 TGATCTCTCTGCTGCCAACT 58.726 50.000 0.00 0.00 0.00 3.16
1997 2080 2.460669 TGATCTCTCTGCTGCCAACTA 58.539 47.619 0.00 0.00 0.00 2.24
1998 2081 2.167281 TGATCTCTCTGCTGCCAACTAC 59.833 50.000 0.00 0.00 0.00 2.73
1999 2082 1.930251 TCTCTCTGCTGCCAACTACT 58.070 50.000 0.00 0.00 0.00 2.57
2000 2083 1.821753 TCTCTCTGCTGCCAACTACTC 59.178 52.381 0.00 0.00 0.00 2.59
2001 2084 0.898320 TCTCTGCTGCCAACTACTCC 59.102 55.000 0.00 0.00 0.00 3.85
2002 2085 0.107945 CTCTGCTGCCAACTACTCCC 60.108 60.000 0.00 0.00 0.00 4.30
2003 2086 0.545309 TCTGCTGCCAACTACTCCCT 60.545 55.000 0.00 0.00 0.00 4.20
2004 2087 0.107945 CTGCTGCCAACTACTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
2005 2088 0.835971 TGCTGCCAACTACTCCCTCA 60.836 55.000 0.00 0.00 0.00 3.86
2006 2089 0.543749 GCTGCCAACTACTCCCTCAT 59.456 55.000 0.00 0.00 0.00 2.90
2007 2090 1.474143 GCTGCCAACTACTCCCTCATC 60.474 57.143 0.00 0.00 0.00 2.92
2008 2091 1.139853 CTGCCAACTACTCCCTCATCC 59.860 57.143 0.00 0.00 0.00 3.51
2009 2092 0.470341 GCCAACTACTCCCTCATCCC 59.530 60.000 0.00 0.00 0.00 3.85
2010 2093 1.879575 CCAACTACTCCCTCATCCCA 58.120 55.000 0.00 0.00 0.00 4.37
2011 2094 2.196595 CCAACTACTCCCTCATCCCAA 58.803 52.381 0.00 0.00 0.00 4.12
2012 2095 2.576191 CCAACTACTCCCTCATCCCAAA 59.424 50.000 0.00 0.00 0.00 3.28
2013 2096 3.010138 CCAACTACTCCCTCATCCCAAAA 59.990 47.826 0.00 0.00 0.00 2.44
2014 2097 4.325344 CCAACTACTCCCTCATCCCAAAAT 60.325 45.833 0.00 0.00 0.00 1.82
2015 2098 5.264395 CAACTACTCCCTCATCCCAAAATT 58.736 41.667 0.00 0.00 0.00 1.82
2016 2099 5.117406 ACTACTCCCTCATCCCAAAATTC 57.883 43.478 0.00 0.00 0.00 2.17
2017 2100 4.790790 ACTACTCCCTCATCCCAAAATTCT 59.209 41.667 0.00 0.00 0.00 2.40
2018 2101 4.682021 ACTCCCTCATCCCAAAATTCTT 57.318 40.909 0.00 0.00 0.00 2.52
2019 2102 4.347607 ACTCCCTCATCCCAAAATTCTTG 58.652 43.478 0.00 0.00 0.00 3.02
2020 2103 4.202716 ACTCCCTCATCCCAAAATTCTTGT 60.203 41.667 0.00 0.00 0.00 3.16
2021 2104 4.344104 TCCCTCATCCCAAAATTCTTGTC 58.656 43.478 0.00 0.00 0.00 3.18
2022 2105 4.044571 TCCCTCATCCCAAAATTCTTGTCT 59.955 41.667 0.00 0.00 0.00 3.41
2023 2106 4.774200 CCCTCATCCCAAAATTCTTGTCTT 59.226 41.667 0.00 0.00 0.00 3.01
2024 2107 5.951747 CCCTCATCCCAAAATTCTTGTCTTA 59.048 40.000 0.00 0.00 0.00 2.10
2025 2108 6.096001 CCCTCATCCCAAAATTCTTGTCTTAG 59.904 42.308 0.00 0.00 0.00 2.18
2026 2109 6.886459 CCTCATCCCAAAATTCTTGTCTTAGA 59.114 38.462 0.00 0.00 0.00 2.10
2027 2110 7.559170 CCTCATCCCAAAATTCTTGTCTTAGAT 59.441 37.037 0.00 0.00 0.00 1.98
2028 2111 8.884124 TCATCCCAAAATTCTTGTCTTAGATT 57.116 30.769 0.00 0.00 0.00 2.40
2029 2112 9.312904 TCATCCCAAAATTCTTGTCTTAGATTT 57.687 29.630 0.00 0.00 0.00 2.17
2030 2113 9.362539 CATCCCAAAATTCTTGTCTTAGATTTG 57.637 33.333 0.00 0.00 29.84 2.32
2031 2114 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
2032 2115 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2033 2116 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2065 2148 9.740239 TGGATGTATCTAATACTAAAACGTGAC 57.260 33.333 0.00 0.00 36.70 3.67
2066 2149 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
2076 2159 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
2077 2160 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
2078 2161 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
2079 2162 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
2080 2163 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
2081 2164 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
2082 2165 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
2083 2166 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
2084 2167 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
2085 2168 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
2086 2169 7.646526 CGTGACTTGATACATCCGTATTTAGAA 59.353 37.037 0.00 0.00 38.48 2.10
2087 2170 9.309516 GTGACTTGATACATCCGTATTTAGAAA 57.690 33.333 0.00 0.00 38.48 2.52
2088 2171 9.878667 TGACTTGATACATCCGTATTTAGAAAA 57.121 29.630 0.00 0.00 38.48 2.29
2109 2192 9.987272 AGAAAAATCTAAGACAAGAATTTTGGG 57.013 29.630 4.79 0.00 38.23 4.12
2110 2193 9.981114 GAAAAATCTAAGACAAGAATTTTGGGA 57.019 29.630 4.79 0.00 38.23 4.37
2111 2194 9.764363 AAAAATCTAAGACAAGAATTTTGGGAC 57.236 29.630 0.20 0.00 37.26 4.46
2112 2195 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2113 2196 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2114 2197 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2115 2198 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2116 2199 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2117 2200 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2118 2201 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2119 2202 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2124 2207 2.852714 TTGGGACGGAGGGAGTATTA 57.147 50.000 0.00 0.00 0.00 0.98
2127 2210 3.660959 TGGGACGGAGGGAGTATTATTT 58.339 45.455 0.00 0.00 0.00 1.40
2287 2372 5.982516 CAGAATAGGTATGCTTCTGTCTGTC 59.017 44.000 3.88 0.00 40.50 3.51
2288 2373 5.896678 AGAATAGGTATGCTTCTGTCTGTCT 59.103 40.000 0.00 0.00 0.00 3.41
2303 2388 3.817647 GTCTGTCTGTCCAGCTCAAATTT 59.182 43.478 0.00 0.00 32.32 1.82
2327 2412 3.005554 TGCTAGCTTGCATTCTTCAGAC 58.994 45.455 19.10 0.00 38.12 3.51
2387 2472 4.481930 TTTGGAGCACTTGTTATTGTCG 57.518 40.909 0.00 0.00 0.00 4.35
2522 2607 8.001881 TGTAGCAGTTTTCTTTATTGGTGAAA 57.998 30.769 0.00 0.00 0.00 2.69
2801 2888 7.837863 ACAGACTTCGACAATATTAAGAAGGA 58.162 34.615 20.88 1.37 41.67 3.36
2949 3036 4.082354 AGCATTGGTTTCTGCTTTCTGATC 60.082 41.667 0.00 0.00 46.22 2.92
2950 3037 4.082354 GCATTGGTTTCTGCTTTCTGATCT 60.082 41.667 0.00 0.00 35.49 2.75
2951 3038 5.566230 GCATTGGTTTCTGCTTTCTGATCTT 60.566 40.000 0.00 0.00 35.49 2.40
3059 3146 3.949586 TTCCAATACCTCATCCATGCA 57.050 42.857 0.00 0.00 0.00 3.96
3297 3386 2.650196 GCATTTGGGTGCTTCGCA 59.350 55.556 0.00 0.00 41.82 5.10
3342 3431 1.382146 AAGGCCTGGGCAATCATGG 60.382 57.895 23.25 0.00 44.11 3.66
3445 3534 2.739379 GCCTTCTGCTTCAGTTACTGTC 59.261 50.000 12.41 4.03 36.87 3.51
3494 3587 2.286294 GCAGGTTAGATGAATGCACTCG 59.714 50.000 0.00 0.00 36.88 4.18
3570 3663 4.497966 GGTGCAAGAAGTTAACAACGAAAC 59.502 41.667 8.61 0.00 36.23 2.78
3624 3717 3.198635 TGTTTGGATCCTGCAAAACCAAA 59.801 39.130 14.23 15.23 44.65 3.28
3692 3786 1.266718 TGATGACGCCAAAAAGAGCAC 59.733 47.619 0.00 0.00 0.00 4.40
3728 3823 3.753272 ACATTCTTGTGAACTCGAATGGG 59.247 43.478 19.62 6.04 44.19 4.00
3739 3834 7.148255 TGTGAACTCGAATGGGATGAAATAAAG 60.148 37.037 0.00 0.00 0.00 1.85
3771 3866 3.914426 ACCTCTGACACAGTTCAGTTT 57.086 42.857 10.65 0.00 43.19 2.66
3846 3941 3.333029 TGCGATCTTCAATTGAGTCCA 57.667 42.857 8.41 6.48 0.00 4.02
3889 4003 3.339141 GACGCCTCAAATTCCTCTTTCT 58.661 45.455 0.00 0.00 0.00 2.52
3929 4043 2.508526 GTCAGTGCTCAAATCCCACTT 58.491 47.619 0.00 0.00 37.70 3.16
3933 4047 5.294552 GTCAGTGCTCAAATCCCACTTATAC 59.705 44.000 0.00 0.00 37.70 1.47
3938 4052 4.049186 CTCAAATCCCACTTATACGTCCG 58.951 47.826 0.00 0.00 0.00 4.79
3939 4053 3.128349 CAAATCCCACTTATACGTCCGG 58.872 50.000 0.00 0.00 0.00 5.14
3941 4055 1.068585 CCCACTTATACGTCCGGGC 59.931 63.158 0.00 0.00 0.00 6.13
3942 4056 1.397390 CCCACTTATACGTCCGGGCT 61.397 60.000 3.66 0.00 0.00 5.19
3943 4057 0.031721 CCACTTATACGTCCGGGCTC 59.968 60.000 3.66 0.00 0.00 4.70
3944 4058 0.317603 CACTTATACGTCCGGGCTCG 60.318 60.000 3.66 0.00 0.00 5.03
3965 4079 1.235724 GCGGACAGCTTTTGGTAAGT 58.764 50.000 0.00 0.00 44.04 2.24
3966 4080 1.069227 GCGGACAGCTTTTGGTAAGTG 60.069 52.381 0.00 0.00 44.04 3.16
3967 4081 2.489971 CGGACAGCTTTTGGTAAGTGA 58.510 47.619 0.00 0.00 0.00 3.41
3968 4082 2.223377 CGGACAGCTTTTGGTAAGTGAC 59.777 50.000 0.00 0.00 0.00 3.67
3969 4083 3.477530 GGACAGCTTTTGGTAAGTGACT 58.522 45.455 0.00 0.00 0.00 3.41
3970 4084 4.638304 GGACAGCTTTTGGTAAGTGACTA 58.362 43.478 0.00 0.00 0.00 2.59
3971 4085 5.061179 GGACAGCTTTTGGTAAGTGACTAA 58.939 41.667 0.00 0.00 0.00 2.24
3972 4086 5.705905 GGACAGCTTTTGGTAAGTGACTAAT 59.294 40.000 0.00 0.00 0.00 1.73
3973 4087 6.128254 GGACAGCTTTTGGTAAGTGACTAATC 60.128 42.308 0.00 0.00 0.00 1.75
3974 4088 5.408604 ACAGCTTTTGGTAAGTGACTAATCG 59.591 40.000 0.00 0.00 0.00 3.34
3975 4089 4.392138 AGCTTTTGGTAAGTGACTAATCGC 59.608 41.667 0.00 0.00 35.42 4.58
3976 4090 4.724036 GCTTTTGGTAAGTGACTAATCGCG 60.724 45.833 0.00 0.00 40.50 5.87
3977 4091 3.853831 TTGGTAAGTGACTAATCGCGA 57.146 42.857 13.09 13.09 40.50 5.87
3978 4092 3.853831 TGGTAAGTGACTAATCGCGAA 57.146 42.857 15.24 0.00 40.50 4.70
3979 4093 4.177165 TGGTAAGTGACTAATCGCGAAA 57.823 40.909 15.24 3.13 40.50 3.46
3980 4094 4.558178 TGGTAAGTGACTAATCGCGAAAA 58.442 39.130 15.24 2.69 40.50 2.29
3981 4095 5.172934 TGGTAAGTGACTAATCGCGAAAAT 58.827 37.500 15.24 5.14 40.50 1.82
3982 4096 6.331845 TGGTAAGTGACTAATCGCGAAAATA 58.668 36.000 15.24 6.17 40.50 1.40
3983 4097 6.982141 TGGTAAGTGACTAATCGCGAAAATAT 59.018 34.615 15.24 0.00 40.50 1.28
3984 4098 7.042992 TGGTAAGTGACTAATCGCGAAAATATG 60.043 37.037 15.24 3.06 40.50 1.78
3985 4099 7.168637 GGTAAGTGACTAATCGCGAAAATATGA 59.831 37.037 15.24 0.00 40.50 2.15
3986 4100 6.512177 AGTGACTAATCGCGAAAATATGAC 57.488 37.500 15.24 5.08 40.50 3.06
3987 4101 5.462398 AGTGACTAATCGCGAAAATATGACC 59.538 40.000 15.24 0.00 40.50 4.02
3988 4102 4.748102 TGACTAATCGCGAAAATATGACCC 59.252 41.667 15.24 0.00 0.00 4.46
3989 4103 4.699637 ACTAATCGCGAAAATATGACCCA 58.300 39.130 15.24 0.00 0.00 4.51
3990 4104 3.963383 AATCGCGAAAATATGACCCAC 57.037 42.857 15.24 0.00 0.00 4.61
3991 4105 1.658994 TCGCGAAAATATGACCCACC 58.341 50.000 6.20 0.00 0.00 4.61
3992 4106 0.661020 CGCGAAAATATGACCCACCC 59.339 55.000 0.00 0.00 0.00 4.61
3993 4107 1.029681 GCGAAAATATGACCCACCCC 58.970 55.000 0.00 0.00 0.00 4.95
3994 4108 1.409661 GCGAAAATATGACCCACCCCT 60.410 52.381 0.00 0.00 0.00 4.79
3995 4109 2.572290 CGAAAATATGACCCACCCCTC 58.428 52.381 0.00 0.00 0.00 4.30
3996 4110 2.572290 GAAAATATGACCCACCCCTCG 58.428 52.381 0.00 0.00 0.00 4.63
3997 4111 1.887797 AAATATGACCCACCCCTCGA 58.112 50.000 0.00 0.00 0.00 4.04
3998 4112 1.887797 AATATGACCCACCCCTCGAA 58.112 50.000 0.00 0.00 0.00 3.71
3999 4113 2.118403 ATATGACCCACCCCTCGAAT 57.882 50.000 0.00 0.00 0.00 3.34
4000 4114 1.420430 TATGACCCACCCCTCGAATC 58.580 55.000 0.00 0.00 0.00 2.52
4001 4115 1.345715 ATGACCCACCCCTCGAATCC 61.346 60.000 0.00 0.00 0.00 3.01
4002 4116 1.993391 GACCCACCCCTCGAATCCA 60.993 63.158 0.00 0.00 0.00 3.41
4003 4117 1.540367 ACCCACCCCTCGAATCCAA 60.540 57.895 0.00 0.00 0.00 3.53
4004 4118 1.137594 ACCCACCCCTCGAATCCAAA 61.138 55.000 0.00 0.00 0.00 3.28
4005 4119 0.039035 CCCACCCCTCGAATCCAAAA 59.961 55.000 0.00 0.00 0.00 2.44
4006 4120 1.173913 CCACCCCTCGAATCCAAAAC 58.826 55.000 0.00 0.00 0.00 2.43
4007 4121 1.546773 CCACCCCTCGAATCCAAAACA 60.547 52.381 0.00 0.00 0.00 2.83
4008 4122 2.446435 CACCCCTCGAATCCAAAACAT 58.554 47.619 0.00 0.00 0.00 2.71
4009 4123 3.616219 CACCCCTCGAATCCAAAACATA 58.384 45.455 0.00 0.00 0.00 2.29
4010 4124 4.207165 CACCCCTCGAATCCAAAACATAT 58.793 43.478 0.00 0.00 0.00 1.78
4011 4125 4.036734 CACCCCTCGAATCCAAAACATATG 59.963 45.833 0.00 0.00 0.00 1.78
4012 4126 3.569701 CCCCTCGAATCCAAAACATATGG 59.430 47.826 7.80 0.00 39.41 2.74
4013 4127 3.569701 CCCTCGAATCCAAAACATATGGG 59.430 47.826 7.80 0.00 38.54 4.00
4014 4128 4.460263 CCTCGAATCCAAAACATATGGGA 58.540 43.478 7.80 4.28 38.54 4.37
4015 4129 4.887071 CCTCGAATCCAAAACATATGGGAA 59.113 41.667 7.80 0.00 38.54 3.97
4016 4130 5.009010 CCTCGAATCCAAAACATATGGGAAG 59.991 44.000 7.80 0.00 38.54 3.46
4017 4131 5.750524 TCGAATCCAAAACATATGGGAAGA 58.249 37.500 7.80 3.45 38.54 2.87
4018 4132 5.588648 TCGAATCCAAAACATATGGGAAGAC 59.411 40.000 7.80 0.37 38.54 3.01
4019 4133 5.221048 CGAATCCAAAACATATGGGAAGACC 60.221 44.000 7.80 0.00 38.54 3.85
4020 4134 4.946160 TCCAAAACATATGGGAAGACCT 57.054 40.909 7.80 0.00 41.11 3.85
4021 4135 4.599041 TCCAAAACATATGGGAAGACCTG 58.401 43.478 7.80 0.00 41.11 4.00
4022 4136 4.290985 TCCAAAACATATGGGAAGACCTGA 59.709 41.667 7.80 0.00 41.11 3.86
4023 4137 4.399303 CCAAAACATATGGGAAGACCTGAC 59.601 45.833 7.80 0.00 41.11 3.51
4024 4138 3.543680 AACATATGGGAAGACCTGACG 57.456 47.619 7.80 0.00 41.11 4.35
4025 4139 2.467880 ACATATGGGAAGACCTGACGT 58.532 47.619 7.80 0.00 41.11 4.34
4026 4140 2.168521 ACATATGGGAAGACCTGACGTG 59.831 50.000 7.80 0.00 41.11 4.49
4027 4141 1.933021 TATGGGAAGACCTGACGTGT 58.067 50.000 0.00 0.00 41.11 4.49
4028 4142 1.056660 ATGGGAAGACCTGACGTGTT 58.943 50.000 0.00 0.00 41.11 3.32
4029 4143 0.391597 TGGGAAGACCTGACGTGTTC 59.608 55.000 0.00 0.00 42.63 3.18
4030 4144 0.666577 GGGAAGACCTGACGTGTTCG 60.667 60.000 0.00 0.00 43.94 3.95
4031 4145 3.290504 GGGAAGACCTGACGTGTTCGT 62.291 57.143 0.00 0.00 43.94 3.85
4045 4159 1.135112 TGTTCGTCATGTCGGATCTGG 60.135 52.381 12.31 0.00 0.00 3.86
4050 4164 1.069823 GTCATGTCGGATCTGGCAGAT 59.930 52.381 29.19 29.19 37.73 2.90
4060 4174 1.746615 CTGGCAGATTGGACCCACG 60.747 63.158 9.42 0.00 0.00 4.94
4073 4187 2.156098 GACCCACGCCAAATTGACTTA 58.844 47.619 0.00 0.00 0.00 2.24
4074 4188 2.159382 ACCCACGCCAAATTGACTTAG 58.841 47.619 0.00 0.00 0.00 2.18
4075 4189 2.159382 CCCACGCCAAATTGACTTAGT 58.841 47.619 0.00 0.00 0.00 2.24
4076 4190 2.161609 CCCACGCCAAATTGACTTAGTC 59.838 50.000 5.27 5.27 0.00 2.59
4080 4194 2.161609 CGCCAAATTGACTTAGTCCACC 59.838 50.000 10.10 0.00 0.00 4.61
4081 4195 3.153919 GCCAAATTGACTTAGTCCACCA 58.846 45.455 10.10 0.00 0.00 4.17
4090 4204 5.556915 TGACTTAGTCCACCAAAATCGATT 58.443 37.500 10.10 4.39 0.00 3.34
4094 4208 4.021102 AGTCCACCAAAATCGATTGTCT 57.979 40.909 12.25 0.00 0.00 3.41
4100 4214 5.124457 CCACCAAAATCGATTGTCTTCTCAT 59.876 40.000 12.25 0.00 0.00 2.90
4101 4215 6.025896 CACCAAAATCGATTGTCTTCTCATG 58.974 40.000 12.25 0.78 0.00 3.07
4124 4238 1.340248 TGTCCTCCAGTTCTCGTGTTC 59.660 52.381 0.00 0.00 0.00 3.18
4147 4261 2.092291 CGTCACCGTCATCAACCCG 61.092 63.158 0.00 0.00 0.00 5.28
4151 4265 2.047274 CCGTCATCAACCCGTGCT 60.047 61.111 0.00 0.00 0.00 4.40
4155 4269 2.360350 CATCAACCCGTGCTGCCT 60.360 61.111 0.00 0.00 0.00 4.75
4158 4272 2.697147 ATCAACCCGTGCTGCCTGTT 62.697 55.000 0.00 0.00 0.00 3.16
4159 4273 2.123897 AACCCGTGCTGCCTGTTT 60.124 55.556 0.00 0.00 0.00 2.83
4162 4276 3.594775 CCGTGCTGCCTGTTTGCA 61.595 61.111 0.00 0.00 39.37 4.08
4168 4282 1.154093 CTGCCTGTTTGCATCGCTG 60.154 57.895 0.00 0.00 41.16 5.18
4198 4312 2.282555 CGAGCCATTGTAGATGTTGTCG 59.717 50.000 0.00 0.00 0.00 4.35
4209 4323 2.125793 GTTGTCGCCGAGTACCCC 60.126 66.667 0.00 0.00 0.00 4.95
4316 4430 2.047179 GGAACCAGGGTGAGCGAC 60.047 66.667 0.00 0.00 0.00 5.19
4320 4434 1.407656 AACCAGGGTGAGCGACAAGA 61.408 55.000 0.00 0.00 0.00 3.02
4321 4435 1.371183 CCAGGGTGAGCGACAAGAA 59.629 57.895 0.00 0.00 0.00 2.52
4322 4436 0.671781 CCAGGGTGAGCGACAAGAAG 60.672 60.000 0.00 0.00 0.00 2.85
4323 4437 0.671781 CAGGGTGAGCGACAAGAAGG 60.672 60.000 0.00 0.00 0.00 3.46
4324 4438 1.122019 AGGGTGAGCGACAAGAAGGT 61.122 55.000 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.470494 TCTCTAGTCGTTCAGCAGCAG 59.530 52.381 0.00 0.00 0.00 4.24
1 2 1.534729 TCTCTAGTCGTTCAGCAGCA 58.465 50.000 0.00 0.00 0.00 4.41
2 3 2.857152 CAATCTCTAGTCGTTCAGCAGC 59.143 50.000 0.00 0.00 0.00 5.25
3 4 3.443037 CCAATCTCTAGTCGTTCAGCAG 58.557 50.000 0.00 0.00 0.00 4.24
4 5 2.417379 GCCAATCTCTAGTCGTTCAGCA 60.417 50.000 0.00 0.00 0.00 4.41
5 6 2.159170 AGCCAATCTCTAGTCGTTCAGC 60.159 50.000 0.00 0.00 0.00 4.26
6 7 3.791973 AGCCAATCTCTAGTCGTTCAG 57.208 47.619 0.00 0.00 0.00 3.02
7 8 4.096532 CAGTAGCCAATCTCTAGTCGTTCA 59.903 45.833 0.00 0.00 0.00 3.18
8 9 4.335874 TCAGTAGCCAATCTCTAGTCGTTC 59.664 45.833 0.00 0.00 0.00 3.95
9 10 4.270834 TCAGTAGCCAATCTCTAGTCGTT 58.729 43.478 0.00 0.00 0.00 3.85
10 11 3.880490 CTCAGTAGCCAATCTCTAGTCGT 59.120 47.826 0.00 0.00 0.00 4.34
11 12 3.304391 GCTCAGTAGCCAATCTCTAGTCG 60.304 52.174 0.00 0.00 43.40 4.18
12 13 3.304391 CGCTCAGTAGCCAATCTCTAGTC 60.304 52.174 0.00 0.00 46.68 2.59
13 14 2.621055 CGCTCAGTAGCCAATCTCTAGT 59.379 50.000 0.00 0.00 46.68 2.57
14 15 2.881513 TCGCTCAGTAGCCAATCTCTAG 59.118 50.000 0.00 0.00 46.68 2.43
15 16 2.619177 GTCGCTCAGTAGCCAATCTCTA 59.381 50.000 0.00 0.00 46.68 2.43
16 17 1.407258 GTCGCTCAGTAGCCAATCTCT 59.593 52.381 0.00 0.00 46.68 3.10
17 18 1.135139 TGTCGCTCAGTAGCCAATCTC 59.865 52.381 0.00 0.00 46.68 2.75
18 19 1.134965 GTGTCGCTCAGTAGCCAATCT 60.135 52.381 0.00 0.00 46.68 2.40
19 20 1.281899 GTGTCGCTCAGTAGCCAATC 58.718 55.000 0.00 0.00 46.68 2.67
20 21 0.108138 GGTGTCGCTCAGTAGCCAAT 60.108 55.000 0.00 0.00 46.68 3.16
21 22 1.292223 GGTGTCGCTCAGTAGCCAA 59.708 57.895 0.00 0.00 46.68 4.52
22 23 2.970639 GGTGTCGCTCAGTAGCCA 59.029 61.111 0.00 0.00 46.68 4.75
23 24 2.202623 CGGTGTCGCTCAGTAGCC 60.203 66.667 0.00 0.00 46.68 3.93
24 25 1.514443 GTCGGTGTCGCTCAGTAGC 60.514 63.158 0.00 0.00 45.86 3.58
25 26 1.226046 CGTCGGTGTCGCTCAGTAG 60.226 63.158 0.00 0.00 36.13 2.57
26 27 2.683859 CCGTCGGTGTCGCTCAGTA 61.684 63.158 2.08 0.00 36.13 2.74
27 28 4.039357 CCGTCGGTGTCGCTCAGT 62.039 66.667 2.08 0.00 36.13 3.41
33 34 4.824166 CTACGGCCGTCGGTGTCG 62.824 72.222 38.01 16.15 44.45 4.35
34 35 4.487412 CCTACGGCCGTCGGTGTC 62.487 72.222 38.01 2.34 44.45 3.67
45 46 0.179045 CCCTCCATCAAAGCCTACGG 60.179 60.000 0.00 0.00 0.00 4.02
46 47 0.815615 GCCCTCCATCAAAGCCTACG 60.816 60.000 0.00 0.00 0.00 3.51
47 48 0.815615 CGCCCTCCATCAAAGCCTAC 60.816 60.000 0.00 0.00 0.00 3.18
48 49 1.526887 CGCCCTCCATCAAAGCCTA 59.473 57.895 0.00 0.00 0.00 3.93
49 50 2.273449 CGCCCTCCATCAAAGCCT 59.727 61.111 0.00 0.00 0.00 4.58
50 51 2.830370 CCGCCCTCCATCAAAGCC 60.830 66.667 0.00 0.00 0.00 4.35
51 52 1.821332 CTCCGCCCTCCATCAAAGC 60.821 63.158 0.00 0.00 0.00 3.51
52 53 1.153086 CCTCCGCCCTCCATCAAAG 60.153 63.158 0.00 0.00 0.00 2.77
53 54 2.679342 CCCTCCGCCCTCCATCAAA 61.679 63.158 0.00 0.00 0.00 2.69
54 55 3.089874 CCCTCCGCCCTCCATCAA 61.090 66.667 0.00 0.00 0.00 2.57
126 127 4.101448 CTGCTCCCTTGACCCGGG 62.101 72.222 22.25 22.25 43.38 5.73
127 128 4.785453 GCTGCTCCCTTGACCCGG 62.785 72.222 0.00 0.00 0.00 5.73
128 129 4.785453 GGCTGCTCCCTTGACCCG 62.785 72.222 0.00 0.00 0.00 5.28
129 130 4.785453 CGGCTGCTCCCTTGACCC 62.785 72.222 0.00 0.00 0.00 4.46
130 131 4.785453 CCGGCTGCTCCCTTGACC 62.785 72.222 0.00 0.00 0.00 4.02
131 132 4.785453 CCCGGCTGCTCCCTTGAC 62.785 72.222 0.00 0.00 0.00 3.18
154 155 4.802051 CACTCCCCCGTGCCCATG 62.802 72.222 0.00 0.00 0.00 3.66
160 161 3.706373 CTCCACCACTCCCCCGTG 61.706 72.222 0.00 0.00 34.71 4.94
165 166 3.775654 CTCGGCTCCACCACTCCC 61.776 72.222 0.00 0.00 39.03 4.30
166 167 3.775654 CCTCGGCTCCACCACTCC 61.776 72.222 0.00 0.00 39.03 3.85
167 168 3.775654 CCCTCGGCTCCACCACTC 61.776 72.222 0.00 0.00 39.03 3.51
203 204 3.787001 CAGACCGCCTCCCCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
204 205 3.787001 CCAGACCGCCTCCCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
233 234 3.110178 GTTGTTCCTCGCCGGTCG 61.110 66.667 1.90 7.73 40.15 4.79
234 235 3.110178 CGTTGTTCCTCGCCGGTC 61.110 66.667 1.90 0.00 0.00 4.79
235 236 4.675029 CCGTTGTTCCTCGCCGGT 62.675 66.667 1.90 0.00 34.10 5.28
239 240 2.813908 ATCGCCGTTGTTCCTCGC 60.814 61.111 0.00 0.00 0.00 5.03
240 241 1.413767 CTCATCGCCGTTGTTCCTCG 61.414 60.000 0.00 0.00 0.00 4.63
241 242 1.084370 CCTCATCGCCGTTGTTCCTC 61.084 60.000 0.00 0.00 0.00 3.71
242 243 1.079127 CCTCATCGCCGTTGTTCCT 60.079 57.895 0.00 0.00 0.00 3.36
243 244 2.750888 GCCTCATCGCCGTTGTTCC 61.751 63.158 0.00 0.00 0.00 3.62
244 245 2.785258 GCCTCATCGCCGTTGTTC 59.215 61.111 0.00 0.00 0.00 3.18
245 246 3.118454 CGCCTCATCGCCGTTGTT 61.118 61.111 0.00 0.00 0.00 2.83
246 247 3.989698 CTCGCCTCATCGCCGTTGT 62.990 63.158 0.00 0.00 0.00 3.32
247 248 3.257561 CTCGCCTCATCGCCGTTG 61.258 66.667 0.00 0.00 0.00 4.10
248 249 4.514577 CCTCGCCTCATCGCCGTT 62.515 66.667 0.00 0.00 0.00 4.44
253 254 4.933064 GACGCCCTCGCCTCATCG 62.933 72.222 0.00 0.00 39.84 3.84
254 255 3.781770 CTGACGCCCTCGCCTCATC 62.782 68.421 0.00 0.00 39.84 2.92
255 256 3.842923 CTGACGCCCTCGCCTCAT 61.843 66.667 0.00 0.00 39.84 2.90
257 258 4.500116 GTCTGACGCCCTCGCCTC 62.500 72.222 0.00 0.00 39.84 4.70
260 261 4.838486 CTCGTCTGACGCCCTCGC 62.838 72.222 24.37 0.00 42.21 5.03
261 262 4.180946 CCTCGTCTGACGCCCTCG 62.181 72.222 24.37 10.02 42.21 4.63
262 263 3.827898 CCCTCGTCTGACGCCCTC 61.828 72.222 24.37 0.00 42.21 4.30
263 264 4.361971 TCCCTCGTCTGACGCCCT 62.362 66.667 24.37 0.00 42.21 5.19
264 265 4.131088 GTCCCTCGTCTGACGCCC 62.131 72.222 24.37 6.93 42.21 6.13
265 266 4.477975 CGTCCCTCGTCTGACGCC 62.478 72.222 24.37 8.95 46.41 5.68
268 269 0.728466 CGTTTCGTCCCTCGTCTGAC 60.728 60.000 0.00 0.00 40.80 3.51
269 270 0.886043 TCGTTTCGTCCCTCGTCTGA 60.886 55.000 0.00 0.00 40.80 3.27
270 271 0.454620 CTCGTTTCGTCCCTCGTCTG 60.455 60.000 0.00 0.00 40.80 3.51
271 272 1.584380 CCTCGTTTCGTCCCTCGTCT 61.584 60.000 0.00 0.00 40.80 4.18
272 273 1.154073 CCTCGTTTCGTCCCTCGTC 60.154 63.158 0.00 0.00 40.80 4.20
273 274 1.174712 TTCCTCGTTTCGTCCCTCGT 61.175 55.000 0.00 0.00 40.80 4.18
274 275 0.731855 GTTCCTCGTTTCGTCCCTCG 60.732 60.000 0.00 0.00 41.41 4.63
275 276 0.731855 CGTTCCTCGTTTCGTCCCTC 60.732 60.000 0.00 0.00 34.52 4.30
276 277 1.288127 CGTTCCTCGTTTCGTCCCT 59.712 57.895 0.00 0.00 34.52 4.20
277 278 1.735559 CCGTTCCTCGTTTCGTCCC 60.736 63.158 0.00 0.00 37.94 4.46
278 279 0.731855 CTCCGTTCCTCGTTTCGTCC 60.732 60.000 0.00 0.00 37.94 4.79
279 280 0.731855 CCTCCGTTCCTCGTTTCGTC 60.732 60.000 0.00 0.00 37.94 4.20
280 281 1.174712 TCCTCCGTTCCTCGTTTCGT 61.175 55.000 0.00 0.00 37.94 3.85
281 282 0.038892 TTCCTCCGTTCCTCGTTTCG 60.039 55.000 0.00 0.00 37.94 3.46
282 283 1.711206 CTTCCTCCGTTCCTCGTTTC 58.289 55.000 0.00 0.00 37.94 2.78
283 284 0.320508 GCTTCCTCCGTTCCTCGTTT 60.321 55.000 0.00 0.00 37.94 3.60
284 285 1.292541 GCTTCCTCCGTTCCTCGTT 59.707 57.895 0.00 0.00 37.94 3.85
285 286 2.971452 GCTTCCTCCGTTCCTCGT 59.029 61.111 0.00 0.00 37.94 4.18
286 287 2.202623 CGCTTCCTCCGTTCCTCG 60.203 66.667 0.00 0.00 39.52 4.63
287 288 2.184579 CCGCTTCCTCCGTTCCTC 59.815 66.667 0.00 0.00 0.00 3.71
288 289 2.283676 TCCGCTTCCTCCGTTCCT 60.284 61.111 0.00 0.00 0.00 3.36
289 290 2.125633 GTCCGCTTCCTCCGTTCC 60.126 66.667 0.00 0.00 0.00 3.62
290 291 2.506438 CGTCCGCTTCCTCCGTTC 60.506 66.667 0.00 0.00 0.00 3.95
291 292 2.987547 TCGTCCGCTTCCTCCGTT 60.988 61.111 0.00 0.00 0.00 4.44
292 293 3.441290 CTCGTCCGCTTCCTCCGT 61.441 66.667 0.00 0.00 0.00 4.69
293 294 3.132139 TCTCGTCCGCTTCCTCCG 61.132 66.667 0.00 0.00 0.00 4.63
294 295 2.490685 GTCTCGTCCGCTTCCTCC 59.509 66.667 0.00 0.00 0.00 4.30
295 296 2.100603 CGTCTCGTCCGCTTCCTC 59.899 66.667 0.00 0.00 0.00 3.71
296 297 2.359602 TCGTCTCGTCCGCTTCCT 60.360 61.111 0.00 0.00 0.00 3.36
297 298 2.100603 CTCGTCTCGTCCGCTTCC 59.899 66.667 0.00 0.00 0.00 3.46
298 299 2.100603 CCTCGTCTCGTCCGCTTC 59.899 66.667 0.00 0.00 0.00 3.86
299 300 3.441290 CCCTCGTCTCGTCCGCTT 61.441 66.667 0.00 0.00 0.00 4.68
300 301 4.719106 ACCCTCGTCTCGTCCGCT 62.719 66.667 0.00 0.00 0.00 5.52
301 302 3.745803 AACCCTCGTCTCGTCCGC 61.746 66.667 0.00 0.00 0.00 5.54
302 303 2.178521 CAACCCTCGTCTCGTCCG 59.821 66.667 0.00 0.00 0.00 4.79
303 304 1.080705 CACAACCCTCGTCTCGTCC 60.081 63.158 0.00 0.00 0.00 4.79
304 305 1.080705 CCACAACCCTCGTCTCGTC 60.081 63.158 0.00 0.00 0.00 4.20
305 306 3.048602 CCACAACCCTCGTCTCGT 58.951 61.111 0.00 0.00 0.00 4.18
306 307 2.432628 GCCACAACCCTCGTCTCG 60.433 66.667 0.00 0.00 0.00 4.04
307 308 2.047179 GGCCACAACCCTCGTCTC 60.047 66.667 0.00 0.00 0.00 3.36
308 309 2.185310 GATGGCCACAACCCTCGTCT 62.185 60.000 8.16 0.00 0.00 4.18
309 310 1.745489 GATGGCCACAACCCTCGTC 60.745 63.158 8.16 0.00 0.00 4.20
310 311 2.351276 GATGGCCACAACCCTCGT 59.649 61.111 8.16 0.00 0.00 4.18
311 312 2.819595 CGATGGCCACAACCCTCG 60.820 66.667 8.16 9.05 40.62 4.63
312 313 1.906105 TACCGATGGCCACAACCCTC 61.906 60.000 8.16 0.00 0.00 4.30
313 314 1.279025 ATACCGATGGCCACAACCCT 61.279 55.000 8.16 0.00 0.00 4.34
314 315 1.101049 CATACCGATGGCCACAACCC 61.101 60.000 8.16 0.00 0.00 4.11
315 316 1.101049 CCATACCGATGGCCACAACC 61.101 60.000 8.16 0.00 46.30 3.77
316 317 2.404083 CCATACCGATGGCCACAAC 58.596 57.895 8.16 1.24 46.30 3.32
317 318 4.975132 CCATACCGATGGCCACAA 57.025 55.556 8.16 0.00 46.30 3.33
324 325 6.349280 CCAATAAGGCAATAACCATACCGATG 60.349 42.308 0.00 0.00 0.00 3.84
325 326 5.710099 CCAATAAGGCAATAACCATACCGAT 59.290 40.000 0.00 0.00 0.00 4.18
326 327 5.067273 CCAATAAGGCAATAACCATACCGA 58.933 41.667 0.00 0.00 0.00 4.69
327 328 4.217550 CCCAATAAGGCAATAACCATACCG 59.782 45.833 0.00 0.00 35.39 4.02
328 329 5.722021 CCCAATAAGGCAATAACCATACC 57.278 43.478 0.00 0.00 35.39 2.73
341 342 8.676401 CATAAAAAGAAAATTGGCCCAATAAGG 58.324 33.333 9.91 0.00 32.43 2.69
342 343 8.676401 CCATAAAAAGAAAATTGGCCCAATAAG 58.324 33.333 9.91 0.00 32.43 1.73
343 344 7.121907 GCCATAAAAAGAAAATTGGCCCAATAA 59.878 33.333 9.91 0.00 42.96 1.40
344 345 6.601217 GCCATAAAAAGAAAATTGGCCCAATA 59.399 34.615 9.91 0.00 42.96 1.90
345 346 5.418524 GCCATAAAAAGAAAATTGGCCCAAT 59.581 36.000 2.23 2.23 42.96 3.16
346 347 4.764308 GCCATAAAAAGAAAATTGGCCCAA 59.236 37.500 0.00 0.00 42.96 4.12
347 348 4.331108 GCCATAAAAAGAAAATTGGCCCA 58.669 39.130 0.00 0.00 42.96 5.36
348 349 4.963276 GCCATAAAAAGAAAATTGGCCC 57.037 40.909 0.00 0.00 42.96 5.80
350 351 4.331108 TGGGCCATAAAAAGAAAATTGGC 58.669 39.130 0.00 3.18 46.92 4.52
351 352 5.559770 ACTGGGCCATAAAAAGAAAATTGG 58.440 37.500 6.72 0.00 0.00 3.16
352 353 8.614469 TTAACTGGGCCATAAAAAGAAAATTG 57.386 30.769 6.72 0.00 0.00 2.32
353 354 9.634021 TTTTAACTGGGCCATAAAAAGAAAATT 57.366 25.926 18.26 0.00 0.00 1.82
354 355 9.634021 TTTTTAACTGGGCCATAAAAAGAAAAT 57.366 25.926 24.01 1.70 35.01 1.82
355 356 9.634021 ATTTTTAACTGGGCCATAAAAAGAAAA 57.366 25.926 28.16 19.43 40.07 2.29
356 357 9.278978 GATTTTTAACTGGGCCATAAAAAGAAA 57.721 29.630 28.16 15.43 40.07 2.52
357 358 7.880713 GGATTTTTAACTGGGCCATAAAAAGAA 59.119 33.333 28.16 15.68 40.07 2.52
358 359 7.016661 TGGATTTTTAACTGGGCCATAAAAAGA 59.983 33.333 28.16 18.35 40.07 2.52
359 360 7.164803 TGGATTTTTAACTGGGCCATAAAAAG 58.835 34.615 28.16 13.28 40.07 2.27
360 361 7.079451 TGGATTTTTAACTGGGCCATAAAAA 57.921 32.000 27.36 27.36 40.63 1.94
361 362 6.688073 TGGATTTTTAACTGGGCCATAAAA 57.312 33.333 17.14 17.14 0.00 1.52
362 363 6.882768 ATGGATTTTTAACTGGGCCATAAA 57.117 33.333 6.72 7.52 33.22 1.40
363 364 7.621683 ACTTATGGATTTTTAACTGGGCCATAA 59.378 33.333 6.72 0.00 41.80 1.90
364 365 7.129425 ACTTATGGATTTTTAACTGGGCCATA 58.871 34.615 6.72 0.00 36.22 2.74
365 366 5.963865 ACTTATGGATTTTTAACTGGGCCAT 59.036 36.000 6.72 0.00 38.19 4.40
366 367 5.337788 ACTTATGGATTTTTAACTGGGCCA 58.662 37.500 5.85 5.85 0.00 5.36
367 368 5.932619 ACTTATGGATTTTTAACTGGGCC 57.067 39.130 0.00 0.00 0.00 5.80
376 377 9.227777 GGTCCGCTTATATACTTATGGATTTTT 57.772 33.333 0.00 0.00 0.00 1.94
377 378 7.827729 GGGTCCGCTTATATACTTATGGATTTT 59.172 37.037 0.00 0.00 0.00 1.82
378 379 7.037873 TGGGTCCGCTTATATACTTATGGATTT 60.038 37.037 0.00 0.00 0.00 2.17
379 380 6.442564 TGGGTCCGCTTATATACTTATGGATT 59.557 38.462 0.00 0.00 0.00 3.01
380 381 5.962031 TGGGTCCGCTTATATACTTATGGAT 59.038 40.000 0.00 0.00 0.00 3.41
381 382 5.335261 TGGGTCCGCTTATATACTTATGGA 58.665 41.667 0.00 0.00 0.00 3.41
382 383 5.670792 TGGGTCCGCTTATATACTTATGG 57.329 43.478 0.00 0.00 0.00 2.74
383 384 7.972832 TTTTGGGTCCGCTTATATACTTATG 57.027 36.000 0.00 0.00 0.00 1.90
384 385 7.827729 GGATTTTGGGTCCGCTTATATACTTAT 59.172 37.037 0.00 0.00 0.00 1.73
385 386 7.163441 GGATTTTGGGTCCGCTTATATACTTA 58.837 38.462 0.00 0.00 0.00 2.24
386 387 6.002082 GGATTTTGGGTCCGCTTATATACTT 58.998 40.000 0.00 0.00 0.00 2.24
387 388 5.514310 GGGATTTTGGGTCCGCTTATATACT 60.514 44.000 0.00 0.00 36.58 2.12
388 389 4.698780 GGGATTTTGGGTCCGCTTATATAC 59.301 45.833 0.00 0.00 36.58 1.47
389 390 4.351407 TGGGATTTTGGGTCCGCTTATATA 59.649 41.667 0.00 0.00 36.58 0.86
390 391 3.139397 TGGGATTTTGGGTCCGCTTATAT 59.861 43.478 0.00 0.00 36.58 0.86
391 392 2.510382 TGGGATTTTGGGTCCGCTTATA 59.490 45.455 0.00 0.00 36.58 0.98
392 393 1.286553 TGGGATTTTGGGTCCGCTTAT 59.713 47.619 0.00 0.00 36.58 1.73
393 394 0.699399 TGGGATTTTGGGTCCGCTTA 59.301 50.000 0.00 0.00 36.58 3.09
394 395 0.611896 CTGGGATTTTGGGTCCGCTT 60.612 55.000 0.00 0.00 36.58 4.68
395 396 1.000896 CTGGGATTTTGGGTCCGCT 60.001 57.895 0.00 0.00 36.58 5.52
396 397 2.052104 CCTGGGATTTTGGGTCCGC 61.052 63.158 0.00 0.00 36.58 5.54
397 398 1.379843 CCCTGGGATTTTGGGTCCG 60.380 63.158 7.01 0.00 36.58 4.79
398 399 4.785575 CCCTGGGATTTTGGGTCC 57.214 61.111 7.01 0.00 36.32 4.46
401 402 4.459199 CCACCCTGGGATTTTGGG 57.541 61.111 22.23 6.82 46.07 4.12
428 429 2.933287 TACAGGGTGGCCAGGGTG 60.933 66.667 5.11 6.08 0.00 4.61
429 430 2.610859 CTACAGGGTGGCCAGGGT 60.611 66.667 5.11 4.53 0.00 4.34
430 431 4.115199 GCTACAGGGTGGCCAGGG 62.115 72.222 5.11 0.00 33.94 4.45
431 432 3.011517 AGCTACAGGGTGGCCAGG 61.012 66.667 5.11 0.00 40.93 4.45
432 433 2.586792 GAGCTACAGGGTGGCCAG 59.413 66.667 5.11 0.00 40.93 4.85
433 434 3.009115 GGAGCTACAGGGTGGCCA 61.009 66.667 0.00 0.00 40.93 5.36
434 435 4.162690 CGGAGCTACAGGGTGGCC 62.163 72.222 0.00 0.00 40.93 5.36
454 455 3.626924 GCTCCCGTCACACCCAGT 61.627 66.667 0.00 0.00 0.00 4.00
455 456 3.596066 CTGCTCCCGTCACACCCAG 62.596 68.421 0.00 0.00 0.00 4.45
534 535 4.409574 TCACCTTTTACTACAACCCTGTCA 59.590 41.667 0.00 0.00 36.96 3.58
550 552 1.546998 GGAACCCACCGAATCACCTTT 60.547 52.381 0.00 0.00 0.00 3.11
572 574 6.421801 CGACTCAAAATCAAAATTGCTCCTTT 59.578 34.615 0.00 0.00 0.00 3.11
576 578 4.090498 GCCGACTCAAAATCAAAATTGCTC 59.910 41.667 0.00 0.00 0.00 4.26
578 580 3.123453 GGCCGACTCAAAATCAAAATTGC 59.877 43.478 0.00 0.00 0.00 3.56
622 624 6.661377 TGCCCAAAAGATTGCTACAACTAATA 59.339 34.615 0.00 0.00 35.10 0.98
674 676 1.406539 GCCAACCACAGCCTATTGATG 59.593 52.381 0.00 0.00 0.00 3.07
676 678 0.676466 CGCCAACCACAGCCTATTGA 60.676 55.000 0.00 0.00 0.00 2.57
688 690 1.526464 CAAAAATGCTTGTCGCCAACC 59.474 47.619 0.00 0.00 38.05 3.77
699 701 1.490069 ACTTGGGCCAACAAAAATGCT 59.510 42.857 16.66 0.00 0.00 3.79
728 730 7.064229 ACTCCAACACTAAACCCTAAAAATCA 58.936 34.615 0.00 0.00 0.00 2.57
767 769 9.739276 ATTTGTTTAGAACATCTCCAATGTCTA 57.261 29.630 0.00 0.00 41.79 2.59
768 770 8.641498 ATTTGTTTAGAACATCTCCAATGTCT 57.359 30.769 0.00 0.00 41.79 3.41
910 922 4.924187 TGGGGTTTGGGTTGGCCG 62.924 66.667 0.00 0.00 34.97 6.13
936 948 0.833287 TCTGGATCTACTGGCTTGGC 59.167 55.000 0.00 0.00 0.00 4.52
1020 1032 3.255379 GGATGAGTTCGACGCGGC 61.255 66.667 12.47 6.41 0.00 6.53
1308 1323 5.066117 TGACAGTACGACTATCTGCCTTTAG 59.934 44.000 0.00 0.00 33.12 1.85
1382 1437 2.947652 AGCGAGAATCCAATCCATGTTG 59.052 45.455 0.00 0.00 0.00 3.33
1401 1456 2.800736 CATTAACGCAGCCCCAGC 59.199 61.111 0.00 0.00 40.32 4.85
1402 1457 1.594194 TTGCATTAACGCAGCCCCAG 61.594 55.000 0.00 0.00 44.14 4.45
1472 1527 1.935873 CAGCATACTGTTGGACATCCG 59.064 52.381 0.00 0.00 39.22 4.18
1488 1543 1.817357 CAATCAGCTCTGAACCAGCA 58.183 50.000 3.47 0.00 43.58 4.41
1526 1581 6.115446 TCTTCCAAATCGTGCTTAATCTGAT 58.885 36.000 0.00 0.00 0.00 2.90
1529 1584 7.094205 ACAATTCTTCCAAATCGTGCTTAATCT 60.094 33.333 0.00 0.00 0.00 2.40
1552 1607 6.800072 AATACAAAAAGGGGAGTTTCACAA 57.200 33.333 0.00 0.00 0.00 3.33
1602 1657 2.846039 TCGTTGCTCCTTATCGAGTC 57.154 50.000 0.00 0.00 32.11 3.36
1662 1720 2.237143 CACACAGATCAAAGAGGCCCTA 59.763 50.000 0.00 0.00 0.00 3.53
1785 1843 8.443160 CCTATGGTGTATACGAAATATGCTTTG 58.557 37.037 0.00 0.00 0.00 2.77
1793 1851 9.706691 CTGTATTTCCTATGGTGTATACGAAAT 57.293 33.333 13.54 13.54 38.89 2.17
1956 2039 6.441093 TCATTGACAAATAGCATTGAGGAC 57.559 37.500 0.00 0.00 34.38 3.85
1996 2079 5.015178 ACAAGAATTTTGGGATGAGGGAGTA 59.985 40.000 5.68 0.00 0.00 2.59
1997 2080 4.202716 ACAAGAATTTTGGGATGAGGGAGT 60.203 41.667 5.68 0.00 0.00 3.85
1998 2081 4.347607 ACAAGAATTTTGGGATGAGGGAG 58.652 43.478 5.68 0.00 0.00 4.30
1999 2082 4.044571 AGACAAGAATTTTGGGATGAGGGA 59.955 41.667 5.68 0.00 0.00 4.20
2000 2083 4.347607 AGACAAGAATTTTGGGATGAGGG 58.652 43.478 5.68 0.00 0.00 4.30
2001 2084 5.990120 AAGACAAGAATTTTGGGATGAGG 57.010 39.130 5.68 0.00 0.00 3.86
2002 2085 7.928307 TCTAAGACAAGAATTTTGGGATGAG 57.072 36.000 5.68 0.00 0.00 2.90
2003 2086 8.884124 AATCTAAGACAAGAATTTTGGGATGA 57.116 30.769 5.68 0.00 0.00 2.92
2004 2087 9.362539 CAAATCTAAGACAAGAATTTTGGGATG 57.637 33.333 5.68 0.00 28.49 3.51
2005 2088 9.093458 ACAAATCTAAGACAAGAATTTTGGGAT 57.907 29.630 0.00 0.00 33.04 3.85
2006 2089 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2007 2090 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2039 2122 9.740239 GTCACGTTTTAGTATTAGATACATCCA 57.260 33.333 0.00 0.00 38.21 3.41
2040 2123 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
2050 2133 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
2051 2134 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
2052 2135 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
2053 2136 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
2054 2137 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
2055 2138 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
2056 2139 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
2057 2140 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
2058 2141 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
2059 2142 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
2060 2143 7.136772 TCTAAATACGGATGTATCAAGTCACG 58.863 38.462 0.00 0.00 40.42 4.35
2061 2144 8.867112 TTCTAAATACGGATGTATCAAGTCAC 57.133 34.615 0.00 0.00 40.42 3.67
2062 2145 9.878667 TTTTCTAAATACGGATGTATCAAGTCA 57.121 29.630 0.00 0.00 40.42 3.41
2083 2166 9.987272 CCCAAAATTCTTGTCTTAGATTTTTCT 57.013 29.630 0.00 0.00 36.41 2.52
2084 2167 9.981114 TCCCAAAATTCTTGTCTTAGATTTTTC 57.019 29.630 0.00 0.00 36.41 2.29
2085 2168 9.764363 GTCCCAAAATTCTTGTCTTAGATTTTT 57.236 29.630 0.00 0.00 37.82 1.94
2086 2169 8.082242 CGTCCCAAAATTCTTGTCTTAGATTTT 58.918 33.333 0.00 0.00 32.19 1.82
2087 2170 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2088 2171 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2089 2172 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2090 2173 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2091 2174 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2092 2175 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2093 2176 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2094 2177 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2095 2178 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2096 2179 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2097 2180 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2098 2181 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2099 2182 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2100 2183 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2101 2184 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2102 2185 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2103 2186 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2104 2187 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2105 2188 2.852714 TAATACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
2106 2189 3.339713 AATAATACTCCCTCCGTCCCA 57.660 47.619 0.00 0.00 0.00 4.37
2107 2190 4.701651 AAAATAATACTCCCTCCGTCCC 57.298 45.455 0.00 0.00 0.00 4.46
2108 2191 7.447594 TGAATAAAATAATACTCCCTCCGTCC 58.552 38.462 0.00 0.00 0.00 4.79
2109 2192 8.897872 TTGAATAAAATAATACTCCCTCCGTC 57.102 34.615 0.00 0.00 0.00 4.79
2110 2193 9.862149 AATTGAATAAAATAATACTCCCTCCGT 57.138 29.630 0.00 0.00 0.00 4.69
2159 2242 4.703703 GGTCAGAACCCTGTGCTC 57.296 61.111 0.00 0.00 39.93 4.26
2287 2372 5.320549 AGCATAAAATTTGAGCTGGACAG 57.679 39.130 10.40 0.00 33.67 3.51
2288 2373 5.163622 GCTAGCATAAAATTTGAGCTGGACA 60.164 40.000 19.95 4.50 36.09 4.02
2327 2412 5.180868 GGAACTAGGAAATATGCAGCAGATG 59.819 44.000 2.53 0.00 0.00 2.90
2377 2462 5.977171 GTGCATATACACCGACAATAACA 57.023 39.130 0.00 0.00 34.35 2.41
2683 2770 9.358872 CCAAGATAAAAGAAAGCTACAAAATCC 57.641 33.333 0.00 0.00 0.00 3.01
2801 2888 8.275040 ACTGGTTAAGATGGCTATTAAGTTGAT 58.725 33.333 0.00 0.00 0.00 2.57
2816 2903 7.450074 TGTAGTTGATTGTCACTGGTTAAGAT 58.550 34.615 0.00 0.00 0.00 2.40
2975 3062 9.731819 GACAATCGAATAAACTATGACTAGTGA 57.268 33.333 0.00 0.00 38.23 3.41
2976 3063 9.737427 AGACAATCGAATAAACTATGACTAGTG 57.263 33.333 0.00 0.00 38.23 2.74
2977 3064 9.737427 CAGACAATCGAATAAACTATGACTAGT 57.263 33.333 0.00 0.00 39.97 2.57
2978 3065 9.737427 ACAGACAATCGAATAAACTATGACTAG 57.263 33.333 0.00 0.00 0.00 2.57
3022 3109 4.749245 TGGAAATTCGAAAGACAAGAGC 57.251 40.909 0.00 0.00 41.84 4.09
3023 3110 7.119846 AGGTATTGGAAATTCGAAAGACAAGAG 59.880 37.037 0.00 0.00 41.84 2.85
3091 3178 8.879759 TGTAAATAGCAACTACTAATCAGCAAC 58.120 33.333 0.00 0.00 0.00 4.17
3105 3192 7.495934 ACACACCATCTCTATGTAAATAGCAAC 59.504 37.037 0.00 0.00 0.00 4.17
3220 3308 7.141363 CACAAGAAAGATTGAATTTCGAAGGT 58.859 34.615 0.00 0.00 40.75 3.50
3297 3386 2.228978 AGATGGTGGATACCCCCATT 57.771 50.000 6.28 0.00 46.96 3.16
3342 3431 4.500375 GGCAACCTAGATTCAAATCATGGC 60.500 45.833 5.59 4.98 37.89 4.40
3445 3534 4.520846 GATGCCGCTTTCGCCACG 62.521 66.667 0.00 0.00 0.00 4.94
3570 3663 5.991606 ACACAACATACATAATCCTCCATCG 59.008 40.000 0.00 0.00 0.00 3.84
3728 3823 7.090808 GGTTCACTGGGAAACTTTATTTCATC 58.909 38.462 0.00 0.00 40.21 2.92
3739 3834 2.158813 TGTCAGAGGTTCACTGGGAAAC 60.159 50.000 0.00 0.00 43.88 2.78
3771 3866 0.608130 ACTGAATGCTACGCACTCCA 59.392 50.000 0.00 0.00 43.04 3.86
3846 3941 4.019681 TCCAATCGTAGATGGTCCAAGTTT 60.020 41.667 0.00 0.00 45.12 2.66
3865 3974 1.351017 AGAGGAATTTGAGGCGTCCAA 59.649 47.619 3.56 0.00 32.19 3.53
3941 4055 2.358737 AAAAGCTGTCCGCCCGAG 60.359 61.111 0.00 0.00 40.39 4.63
3942 4056 2.668212 CAAAAGCTGTCCGCCCGA 60.668 61.111 0.00 0.00 40.39 5.14
3943 4057 3.737172 CCAAAAGCTGTCCGCCCG 61.737 66.667 0.00 0.00 40.39 6.13
3944 4058 0.891904 TTACCAAAAGCTGTCCGCCC 60.892 55.000 0.00 0.00 40.39 6.13
3945 4059 0.521735 CTTACCAAAAGCTGTCCGCC 59.478 55.000 0.00 0.00 40.39 6.13
3946 4060 1.069227 CACTTACCAAAAGCTGTCCGC 60.069 52.381 0.00 0.00 39.57 5.54
3947 4061 2.223377 GTCACTTACCAAAAGCTGTCCG 59.777 50.000 0.00 0.00 0.00 4.79
3948 4062 3.477530 AGTCACTTACCAAAAGCTGTCC 58.522 45.455 0.00 0.00 0.00 4.02
3949 4063 6.401153 CGATTAGTCACTTACCAAAAGCTGTC 60.401 42.308 0.00 0.00 0.00 3.51
3950 4064 5.408604 CGATTAGTCACTTACCAAAAGCTGT 59.591 40.000 0.00 0.00 0.00 4.40
3951 4065 5.671329 GCGATTAGTCACTTACCAAAAGCTG 60.671 44.000 0.00 0.00 0.00 4.24
3952 4066 4.392138 GCGATTAGTCACTTACCAAAAGCT 59.608 41.667 0.00 0.00 0.00 3.74
3953 4067 4.648970 GCGATTAGTCACTTACCAAAAGC 58.351 43.478 0.00 0.00 0.00 3.51
3954 4068 4.624024 TCGCGATTAGTCACTTACCAAAAG 59.376 41.667 3.71 0.00 0.00 2.27
3955 4069 4.558178 TCGCGATTAGTCACTTACCAAAA 58.442 39.130 3.71 0.00 0.00 2.44
3956 4070 4.177165 TCGCGATTAGTCACTTACCAAA 57.823 40.909 3.71 0.00 0.00 3.28
3957 4071 3.853831 TCGCGATTAGTCACTTACCAA 57.146 42.857 3.71 0.00 0.00 3.67
3958 4072 3.853831 TTCGCGATTAGTCACTTACCA 57.146 42.857 10.88 0.00 0.00 3.25
3959 4073 5.713822 ATTTTCGCGATTAGTCACTTACC 57.286 39.130 10.88 0.00 0.00 2.85
3960 4074 7.997104 GTCATATTTTCGCGATTAGTCACTTAC 59.003 37.037 10.88 0.00 0.00 2.34
3961 4075 7.168637 GGTCATATTTTCGCGATTAGTCACTTA 59.831 37.037 10.88 0.00 0.00 2.24
3962 4076 6.018994 GGTCATATTTTCGCGATTAGTCACTT 60.019 38.462 10.88 0.00 0.00 3.16
3963 4077 5.462398 GGTCATATTTTCGCGATTAGTCACT 59.538 40.000 10.88 0.00 0.00 3.41
3964 4078 5.333111 GGGTCATATTTTCGCGATTAGTCAC 60.333 44.000 10.88 1.64 0.00 3.67
3965 4079 4.748102 GGGTCATATTTTCGCGATTAGTCA 59.252 41.667 10.88 0.00 0.00 3.41
3966 4080 4.748102 TGGGTCATATTTTCGCGATTAGTC 59.252 41.667 10.88 0.00 0.00 2.59
3967 4081 4.510340 GTGGGTCATATTTTCGCGATTAGT 59.490 41.667 10.88 0.29 0.00 2.24
3968 4082 4.084013 GGTGGGTCATATTTTCGCGATTAG 60.084 45.833 10.88 0.00 0.00 1.73
3969 4083 3.810941 GGTGGGTCATATTTTCGCGATTA 59.189 43.478 10.88 0.33 0.00 1.75
3970 4084 2.616842 GGTGGGTCATATTTTCGCGATT 59.383 45.455 10.88 0.03 0.00 3.34
3971 4085 2.218603 GGTGGGTCATATTTTCGCGAT 58.781 47.619 10.88 0.00 0.00 4.58
3972 4086 1.658994 GGTGGGTCATATTTTCGCGA 58.341 50.000 3.71 3.71 0.00 5.87
3973 4087 0.661020 GGGTGGGTCATATTTTCGCG 59.339 55.000 0.00 0.00 0.00 5.87
3974 4088 1.029681 GGGGTGGGTCATATTTTCGC 58.970 55.000 0.00 0.00 0.00 4.70
3975 4089 2.572290 GAGGGGTGGGTCATATTTTCG 58.428 52.381 0.00 0.00 0.00 3.46
3976 4090 2.171870 TCGAGGGGTGGGTCATATTTTC 59.828 50.000 0.00 0.00 0.00 2.29
3977 4091 2.201830 TCGAGGGGTGGGTCATATTTT 58.798 47.619 0.00 0.00 0.00 1.82
3978 4092 1.887797 TCGAGGGGTGGGTCATATTT 58.112 50.000 0.00 0.00 0.00 1.40
3979 4093 1.887797 TTCGAGGGGTGGGTCATATT 58.112 50.000 0.00 0.00 0.00 1.28
3980 4094 1.978580 GATTCGAGGGGTGGGTCATAT 59.021 52.381 0.00 0.00 0.00 1.78
3981 4095 1.420430 GATTCGAGGGGTGGGTCATA 58.580 55.000 0.00 0.00 0.00 2.15
3982 4096 1.345715 GGATTCGAGGGGTGGGTCAT 61.346 60.000 0.00 0.00 0.00 3.06
3983 4097 1.993391 GGATTCGAGGGGTGGGTCA 60.993 63.158 0.00 0.00 0.00 4.02
3984 4098 1.559065 TTGGATTCGAGGGGTGGGTC 61.559 60.000 0.00 0.00 0.00 4.46
3985 4099 1.137594 TTTGGATTCGAGGGGTGGGT 61.138 55.000 0.00 0.00 0.00 4.51
3986 4100 0.039035 TTTTGGATTCGAGGGGTGGG 59.961 55.000 0.00 0.00 0.00 4.61
3987 4101 1.173913 GTTTTGGATTCGAGGGGTGG 58.826 55.000 0.00 0.00 0.00 4.61
3988 4102 1.904287 TGTTTTGGATTCGAGGGGTG 58.096 50.000 0.00 0.00 0.00 4.61
3989 4103 2.899303 ATGTTTTGGATTCGAGGGGT 57.101 45.000 0.00 0.00 0.00 4.95
3990 4104 3.569701 CCATATGTTTTGGATTCGAGGGG 59.430 47.826 1.24 0.00 36.26 4.79
3991 4105 3.569701 CCCATATGTTTTGGATTCGAGGG 59.430 47.826 1.24 0.00 36.26 4.30
3992 4106 4.460263 TCCCATATGTTTTGGATTCGAGG 58.540 43.478 1.24 0.00 36.26 4.63
3993 4107 5.822519 TCTTCCCATATGTTTTGGATTCGAG 59.177 40.000 1.24 0.00 36.26 4.04
3994 4108 5.588648 GTCTTCCCATATGTTTTGGATTCGA 59.411 40.000 1.24 0.00 36.26 3.71
3995 4109 5.221048 GGTCTTCCCATATGTTTTGGATTCG 60.221 44.000 1.24 0.00 36.26 3.34
3996 4110 5.893824 AGGTCTTCCCATATGTTTTGGATTC 59.106 40.000 1.24 0.00 36.26 2.52
3997 4111 5.658190 CAGGTCTTCCCATATGTTTTGGATT 59.342 40.000 1.24 0.00 36.26 3.01
3998 4112 5.044179 TCAGGTCTTCCCATATGTTTTGGAT 60.044 40.000 1.24 0.00 36.26 3.41
3999 4113 4.290985 TCAGGTCTTCCCATATGTTTTGGA 59.709 41.667 1.24 0.00 36.26 3.53
4000 4114 4.399303 GTCAGGTCTTCCCATATGTTTTGG 59.601 45.833 1.24 0.00 34.66 3.28
4001 4115 4.094887 CGTCAGGTCTTCCCATATGTTTTG 59.905 45.833 1.24 0.00 34.66 2.44
4002 4116 4.261801 CGTCAGGTCTTCCCATATGTTTT 58.738 43.478 1.24 0.00 34.66 2.43
4003 4117 3.263425 ACGTCAGGTCTTCCCATATGTTT 59.737 43.478 1.24 0.00 34.66 2.83
4004 4118 2.838202 ACGTCAGGTCTTCCCATATGTT 59.162 45.455 1.24 0.00 34.66 2.71
4005 4119 2.168521 CACGTCAGGTCTTCCCATATGT 59.831 50.000 1.24 0.00 34.66 2.29
4006 4120 2.168521 ACACGTCAGGTCTTCCCATATG 59.831 50.000 0.00 0.00 34.66 1.78
4007 4121 2.467880 ACACGTCAGGTCTTCCCATAT 58.532 47.619 0.00 0.00 34.66 1.78
4008 4122 1.933021 ACACGTCAGGTCTTCCCATA 58.067 50.000 0.00 0.00 34.66 2.74
4009 4123 1.002087 GAACACGTCAGGTCTTCCCAT 59.998 52.381 0.00 0.00 34.66 4.00
4010 4124 0.391597 GAACACGTCAGGTCTTCCCA 59.608 55.000 0.00 0.00 34.66 4.37
4011 4125 0.666577 CGAACACGTCAGGTCTTCCC 60.667 60.000 0.00 0.00 0.00 3.97
4012 4126 0.031721 ACGAACACGTCAGGTCTTCC 59.968 55.000 0.00 0.00 35.22 3.46
4013 4127 3.564455 ACGAACACGTCAGGTCTTC 57.436 52.632 0.00 0.00 35.22 2.87
4022 4136 0.242825 ATCCGACATGACGAACACGT 59.757 50.000 19.00 0.00 43.06 4.49
4023 4137 0.914551 GATCCGACATGACGAACACG 59.085 55.000 19.00 1.96 35.09 4.49
4024 4138 1.920574 CAGATCCGACATGACGAACAC 59.079 52.381 19.00 7.37 35.09 3.32
4025 4139 1.135112 CCAGATCCGACATGACGAACA 60.135 52.381 19.00 2.97 35.09 3.18
4026 4140 1.560923 CCAGATCCGACATGACGAAC 58.439 55.000 19.00 9.29 35.09 3.95
4027 4141 0.179111 GCCAGATCCGACATGACGAA 60.179 55.000 19.00 0.00 35.09 3.85
4028 4142 1.319614 TGCCAGATCCGACATGACGA 61.320 55.000 19.00 5.75 35.09 4.20
4029 4143 0.873312 CTGCCAGATCCGACATGACG 60.873 60.000 10.68 10.68 0.00 4.35
4030 4144 0.461548 TCTGCCAGATCCGACATGAC 59.538 55.000 0.00 0.00 0.00 3.06
4031 4145 1.417288 ATCTGCCAGATCCGACATGA 58.583 50.000 0.08 0.00 25.75 3.07
4032 4146 1.871676 CAATCTGCCAGATCCGACATG 59.128 52.381 7.84 0.00 32.89 3.21
4033 4147 1.202734 CCAATCTGCCAGATCCGACAT 60.203 52.381 7.84 0.00 32.89 3.06
4034 4148 0.178767 CCAATCTGCCAGATCCGACA 59.821 55.000 7.84 0.00 32.89 4.35
4045 4159 3.134127 GGCGTGGGTCCAATCTGC 61.134 66.667 0.00 0.00 0.00 4.26
4050 4164 0.468214 TCAATTTGGCGTGGGTCCAA 60.468 50.000 0.00 0.00 41.47 3.53
4060 4174 3.153919 TGGTGGACTAAGTCAATTTGGC 58.846 45.455 0.00 0.00 33.68 4.52
4073 4187 4.021102 AGACAATCGATTTTGGTGGACT 57.979 40.909 8.21 0.00 0.00 3.85
4074 4188 4.455877 AGAAGACAATCGATTTTGGTGGAC 59.544 41.667 8.21 0.00 0.00 4.02
4075 4189 4.651778 AGAAGACAATCGATTTTGGTGGA 58.348 39.130 8.21 0.00 0.00 4.02
4076 4190 4.455533 TGAGAAGACAATCGATTTTGGTGG 59.544 41.667 8.21 0.00 0.00 4.61
4080 4194 6.959871 CAGACATGAGAAGACAATCGATTTTG 59.040 38.462 8.21 2.13 0.00 2.44
4081 4195 6.652481 ACAGACATGAGAAGACAATCGATTTT 59.348 34.615 8.21 1.20 0.00 1.82
4090 4204 2.828520 GGAGGACAGACATGAGAAGACA 59.171 50.000 0.00 0.00 0.00 3.41
4155 4269 1.372004 GCAAGCAGCGATGCAAACA 60.372 52.632 29.24 0.00 42.12 2.83
4168 4282 1.065273 CAATGGCTCGGATGCAAGC 59.935 57.895 0.00 0.00 37.80 4.01
4170 4284 1.209261 TCTACAATGGCTCGGATGCAA 59.791 47.619 0.00 0.00 34.04 4.08
4171 4285 0.829990 TCTACAATGGCTCGGATGCA 59.170 50.000 0.00 0.00 34.04 3.96
4270 4384 1.170290 CCCTTCGGGCAACGTTCTTT 61.170 55.000 0.00 0.00 44.69 2.52
4271 4385 1.599797 CCCTTCGGGCAACGTTCTT 60.600 57.895 0.00 0.00 44.69 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.