Multiple sequence alignment - TraesCS2A01G253900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G253900 chr2A 100.000 3619 0 0 1 3619 386297999 386294381 0.000000e+00 6684.0
1 TraesCS2A01G253900 chr2A 85.149 101 13 2 3517 3617 87866780 87866682 6.390000e-18 102.0
2 TraesCS2A01G253900 chr2D 95.754 2779 76 15 776 3530 306533063 306530303 0.000000e+00 4440.0
3 TraesCS2A01G253900 chr2D 90.179 224 21 1 201 423 575230501 575230278 1.270000e-74 291.0
4 TraesCS2A01G253900 chr2D 91.837 98 4 2 3526 3619 306530215 306530118 2.270000e-27 134.0
5 TraesCS2A01G253900 chr2D 88.073 109 10 3 447 554 612333558 612333452 3.790000e-25 126.0
6 TraesCS2A01G253900 chr2B 94.842 2249 73 15 580 2803 374803501 374801271 0.000000e+00 3470.0
7 TraesCS2A01G253900 chr2B 96.827 914 25 1 2706 3619 374801226 374800317 0.000000e+00 1524.0
8 TraesCS2A01G253900 chr2B 90.541 222 20 1 199 419 798707478 798707257 3.530000e-75 292.0
9 TraesCS2A01G253900 chr2B 96.939 98 3 0 2706 2803 374801297 374801200 8.040000e-37 165.0
10 TraesCS2A01G253900 chr2B 92.241 116 7 1 441 554 722399021 722399136 2.890000e-36 163.0
11 TraesCS2A01G253900 chr2B 90.654 107 10 0 441 547 732054039 732054145 3.770000e-30 143.0
12 TraesCS2A01G253900 chr7D 90.541 222 19 2 199 419 49806674 49806894 3.530000e-75 292.0
13 TraesCS2A01G253900 chr7D 86.364 154 16 5 248 398 289266152 289266303 2.890000e-36 163.0
14 TraesCS2A01G253900 chr4D 90.179 224 21 1 199 421 101498876 101499099 1.270000e-74 291.0
15 TraesCS2A01G253900 chr1B 90.179 224 21 1 199 421 661438917 661438694 1.270000e-74 291.0
16 TraesCS2A01G253900 chr1B 88.559 236 25 2 187 420 484457622 484457857 5.910000e-73 285.0
17 TraesCS2A01G253900 chr1B 88.559 236 25 2 199 432 507923024 507923259 5.910000e-73 285.0
18 TraesCS2A01G253900 chr1B 85.185 270 36 4 154 420 484293485 484293217 1.280000e-69 274.0
19 TraesCS2A01G253900 chr1B 77.224 281 44 18 153 420 677123818 677123545 2.910000e-31 147.0
20 TraesCS2A01G253900 chr1B 92.079 101 7 1 441 540 645553504 645553404 1.350000e-29 141.0
21 TraesCS2A01G253900 chr5A 85.328 259 37 1 159 416 60312590 60312332 2.140000e-67 267.0
22 TraesCS2A01G253900 chr5A 78.392 199 25 12 3423 3611 410512860 410513050 2.950000e-21 113.0
23 TraesCS2A01G253900 chr5A 91.525 59 1 4 154 208 22727756 22727814 1.080000e-10 78.7
24 TraesCS2A01G253900 chr5A 82.418 91 11 5 3527 3617 2405438 2405353 1.390000e-09 75.0
25 TraesCS2A01G253900 chr5D 94.393 107 6 0 441 547 432024919 432025025 8.040000e-37 165.0
26 TraesCS2A01G253900 chr5D 85.366 82 11 1 3398 3479 267617436 267617516 2.320000e-12 84.2
27 TraesCS2A01G253900 chr5D 97.872 47 1 0 154 200 525085294 525085248 8.330000e-12 82.4
28 TraesCS2A01G253900 chr6D 89.744 117 10 2 441 556 15694160 15694045 8.100000e-32 148.0
29 TraesCS2A01G253900 chr5B 91.589 107 9 0 441 547 361435905 361435799 8.100000e-32 148.0
30 TraesCS2A01G253900 chr5B 94.872 78 4 0 3537 3614 697124969 697125046 4.910000e-24 122.0
31 TraesCS2A01G253900 chr5B 80.672 119 21 2 3494 3612 65557448 65557564 1.380000e-14 91.6
32 TraesCS2A01G253900 chr7B 89.565 115 11 1 441 554 57587561 57587675 1.050000e-30 145.0
33 TraesCS2A01G253900 chr4A 79.630 216 31 10 3408 3614 312683177 312683388 3.770000e-30 143.0
34 TraesCS2A01G253900 chr4B 79.535 215 31 10 3412 3617 317763535 317763325 1.350000e-29 141.0
35 TraesCS2A01G253900 chr3D 91.089 101 8 1 447 547 548803510 548803411 6.300000e-28 135.0
36 TraesCS2A01G253900 chr3D 87.879 66 6 2 3398 3463 254109869 254109932 3.870000e-10 76.8
37 TraesCS2A01G253900 chr1D 96.154 52 1 1 154 204 6661318 6661369 2.320000e-12 84.2
38 TraesCS2A01G253900 chr6B 96.000 50 2 0 151 200 575794646 575794695 8.330000e-12 82.4
39 TraesCS2A01G253900 chr3A 97.872 47 1 0 154 200 746319174 746319128 8.330000e-12 82.4
40 TraesCS2A01G253900 chr3A 87.879 66 6 2 3398 3463 335471216 335471153 3.870000e-10 76.8
41 TraesCS2A01G253900 chr3A 83.333 84 13 1 3400 3483 468533887 468533805 3.870000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G253900 chr2A 386294381 386297999 3618 True 6684.000000 6684 100.000000 1 3619 1 chr2A.!!$R2 3618
1 TraesCS2A01G253900 chr2D 306530118 306533063 2945 True 2287.000000 4440 93.795500 776 3619 2 chr2D.!!$R3 2843
2 TraesCS2A01G253900 chr2B 374800317 374803501 3184 True 1719.666667 3470 96.202667 580 3619 3 chr2B.!!$R2 3039

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.043334 ACACCCCTATGAGCACCTCT 59.957 55.0 0.00 0.0 0.00 3.69 F
419 420 0.179043 TAAGCACAGGTTGGTTCGCA 60.179 50.0 0.00 0.0 42.45 5.10 F
2112 2133 0.454620 CACGGTACTCGACTGACTGC 60.455 60.0 10.17 0.0 42.43 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1492 1507 1.551019 GGCTACCCAGTTCGTCCCTT 61.551 60.000 0.0 0.0 0.0 3.95 R
2386 2419 0.662619 TGCTGCTGTTAGTGTGTTGC 59.337 50.000 0.0 0.0 0.0 4.17 R
3128 3305 1.273327 CCTTGTTGCATTCCTTGTCCC 59.727 52.381 0.0 0.0 0.0 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.531622 TTTTTATCGGATAGTTCGTGTGTTAA 57.468 30.769 0.00 0.00 0.00 2.01
31 32 8.706492 TTTTATCGGATAGTTCGTGTGTTAAT 57.294 30.769 0.00 0.00 0.00 1.40
32 33 7.688478 TTATCGGATAGTTCGTGTGTTAATG 57.312 36.000 0.00 0.00 0.00 1.90
33 34 5.313520 TCGGATAGTTCGTGTGTTAATGA 57.686 39.130 0.00 0.00 0.00 2.57
34 35 5.898174 TCGGATAGTTCGTGTGTTAATGAT 58.102 37.500 0.00 0.00 0.00 2.45
35 36 7.030075 TCGGATAGTTCGTGTGTTAATGATA 57.970 36.000 0.00 0.00 0.00 2.15
36 37 7.136772 TCGGATAGTTCGTGTGTTAATGATAG 58.863 38.462 0.00 0.00 0.00 2.08
37 38 7.012610 TCGGATAGTTCGTGTGTTAATGATAGA 59.987 37.037 0.00 0.00 0.00 1.98
38 39 7.808381 CGGATAGTTCGTGTGTTAATGATAGAT 59.192 37.037 0.00 0.00 0.00 1.98
42 43 8.299262 AGTTCGTGTGTTAATGATAGATATGC 57.701 34.615 0.00 0.00 0.00 3.14
43 44 7.926018 AGTTCGTGTGTTAATGATAGATATGCA 59.074 33.333 0.00 0.00 0.00 3.96
44 45 7.873739 TCGTGTGTTAATGATAGATATGCAG 57.126 36.000 0.00 0.00 0.00 4.41
45 46 7.657336 TCGTGTGTTAATGATAGATATGCAGA 58.343 34.615 0.00 0.00 0.00 4.26
46 47 7.809806 TCGTGTGTTAATGATAGATATGCAGAG 59.190 37.037 0.00 0.00 0.00 3.35
47 48 7.062722 CGTGTGTTAATGATAGATATGCAGAGG 59.937 40.741 0.00 0.00 0.00 3.69
48 49 7.875041 GTGTGTTAATGATAGATATGCAGAGGT 59.125 37.037 0.00 0.00 0.00 3.85
49 50 8.090831 TGTGTTAATGATAGATATGCAGAGGTC 58.909 37.037 0.00 0.00 0.00 3.85
50 51 8.090831 GTGTTAATGATAGATATGCAGAGGTCA 58.909 37.037 0.00 0.00 0.00 4.02
51 52 8.309656 TGTTAATGATAGATATGCAGAGGTCAG 58.690 37.037 0.00 0.00 0.00 3.51
52 53 8.526978 GTTAATGATAGATATGCAGAGGTCAGA 58.473 37.037 0.00 0.00 0.00 3.27
53 54 7.736881 AATGATAGATATGCAGAGGTCAGAT 57.263 36.000 0.00 0.00 0.00 2.90
54 55 6.527057 TGATAGATATGCAGAGGTCAGATG 57.473 41.667 0.00 0.00 0.00 2.90
55 56 6.015282 TGATAGATATGCAGAGGTCAGATGT 58.985 40.000 0.00 0.00 0.00 3.06
56 57 6.496218 TGATAGATATGCAGAGGTCAGATGTT 59.504 38.462 0.00 0.00 0.00 2.71
57 58 4.958509 AGATATGCAGAGGTCAGATGTTG 58.041 43.478 0.00 0.00 0.00 3.33
58 59 4.408270 AGATATGCAGAGGTCAGATGTTGT 59.592 41.667 0.00 0.00 0.00 3.32
59 60 2.462456 TGCAGAGGTCAGATGTTGTC 57.538 50.000 0.00 0.00 0.00 3.18
60 61 1.693606 TGCAGAGGTCAGATGTTGTCA 59.306 47.619 0.00 0.00 0.00 3.58
61 62 2.104622 TGCAGAGGTCAGATGTTGTCAA 59.895 45.455 0.00 0.00 0.00 3.18
62 63 3.244665 TGCAGAGGTCAGATGTTGTCAAT 60.245 43.478 0.00 0.00 0.00 2.57
63 64 3.373439 GCAGAGGTCAGATGTTGTCAATC 59.627 47.826 0.00 0.00 0.00 2.67
64 65 4.572909 CAGAGGTCAGATGTTGTCAATCA 58.427 43.478 0.00 0.00 0.00 2.57
65 66 5.183969 CAGAGGTCAGATGTTGTCAATCAT 58.816 41.667 0.00 0.00 0.00 2.45
66 67 5.064834 CAGAGGTCAGATGTTGTCAATCATG 59.935 44.000 5.67 0.00 0.00 3.07
67 68 5.046087 AGAGGTCAGATGTTGTCAATCATGA 60.046 40.000 0.00 0.00 0.00 3.07
68 69 5.752650 AGGTCAGATGTTGTCAATCATGAT 58.247 37.500 1.18 1.18 38.01 2.45
69 70 6.185511 AGGTCAGATGTTGTCAATCATGATT 58.814 36.000 15.36 15.36 38.01 2.57
71 72 6.127814 GGTCAGATGTTGTCAATCATGATTGT 60.128 38.462 35.74 22.33 46.15 2.71
72 73 6.745907 GTCAGATGTTGTCAATCATGATTGTG 59.254 38.462 35.74 26.64 46.15 3.33
73 74 6.431852 TCAGATGTTGTCAATCATGATTGTGT 59.568 34.615 35.74 18.98 46.15 3.72
74 75 6.745907 CAGATGTTGTCAATCATGATTGTGTC 59.254 38.462 35.74 27.85 46.15 3.67
75 76 5.375417 TGTTGTCAATCATGATTGTGTCC 57.625 39.130 35.74 25.31 46.15 4.02
76 77 4.083377 TGTTGTCAATCATGATTGTGTCCG 60.083 41.667 35.74 18.14 46.15 4.79
77 78 2.419673 TGTCAATCATGATTGTGTCCGC 59.580 45.455 35.74 23.15 46.15 5.54
78 79 2.679837 GTCAATCATGATTGTGTCCGCT 59.320 45.455 35.74 6.62 46.15 5.52
79 80 3.871006 GTCAATCATGATTGTGTCCGCTA 59.129 43.478 35.74 19.11 46.15 4.26
80 81 4.025396 GTCAATCATGATTGTGTCCGCTAG 60.025 45.833 35.74 15.71 46.15 3.42
81 82 4.122046 CAATCATGATTGTGTCCGCTAGA 58.878 43.478 31.74 0.00 42.32 2.43
82 83 4.613925 ATCATGATTGTGTCCGCTAGAT 57.386 40.909 1.18 0.00 0.00 1.98
83 84 3.721035 TCATGATTGTGTCCGCTAGATG 58.279 45.455 0.00 0.00 0.00 2.90
84 85 1.939974 TGATTGTGTCCGCTAGATGC 58.060 50.000 0.00 0.00 38.57 3.91
85 86 1.482182 TGATTGTGTCCGCTAGATGCT 59.518 47.619 0.00 0.00 40.11 3.79
86 87 2.693074 TGATTGTGTCCGCTAGATGCTA 59.307 45.455 0.00 0.00 40.11 3.49
87 88 3.321968 TGATTGTGTCCGCTAGATGCTAT 59.678 43.478 0.00 0.00 40.11 2.97
88 89 4.522789 TGATTGTGTCCGCTAGATGCTATA 59.477 41.667 0.00 0.00 40.11 1.31
89 90 5.185828 TGATTGTGTCCGCTAGATGCTATAT 59.814 40.000 0.00 0.00 40.11 0.86
90 91 6.377146 TGATTGTGTCCGCTAGATGCTATATA 59.623 38.462 0.00 0.00 40.11 0.86
91 92 6.775594 TTGTGTCCGCTAGATGCTATATAT 57.224 37.500 0.00 0.00 40.11 0.86
92 93 6.775594 TGTGTCCGCTAGATGCTATATATT 57.224 37.500 0.00 0.00 40.11 1.28
93 94 7.170393 TGTGTCCGCTAGATGCTATATATTT 57.830 36.000 0.00 0.00 40.11 1.40
94 95 7.611770 TGTGTCCGCTAGATGCTATATATTTT 58.388 34.615 0.00 0.00 40.11 1.82
95 96 8.094548 TGTGTCCGCTAGATGCTATATATTTTT 58.905 33.333 0.00 0.00 40.11 1.94
135 136 9.959721 AGCTTCTTTTATCATAGTAGGAAAACA 57.040 29.630 0.00 0.00 0.00 2.83
136 137 9.989869 GCTTCTTTTATCATAGTAGGAAAACAC 57.010 33.333 0.00 0.00 0.00 3.32
145 146 7.321153 TCATAGTAGGAAAACACAAGTAGAGC 58.679 38.462 0.00 0.00 0.00 4.09
146 147 5.546621 AGTAGGAAAACACAAGTAGAGCA 57.453 39.130 0.00 0.00 0.00 4.26
147 148 5.925509 AGTAGGAAAACACAAGTAGAGCAA 58.074 37.500 0.00 0.00 0.00 3.91
148 149 5.992217 AGTAGGAAAACACAAGTAGAGCAAG 59.008 40.000 0.00 0.00 0.00 4.01
149 150 4.781934 AGGAAAACACAAGTAGAGCAAGT 58.218 39.130 0.00 0.00 0.00 3.16
150 151 4.576463 AGGAAAACACAAGTAGAGCAAGTG 59.424 41.667 0.00 0.00 36.34 3.16
151 152 4.335594 GGAAAACACAAGTAGAGCAAGTGT 59.664 41.667 0.00 0.00 44.53 3.55
152 153 4.882671 AAACACAAGTAGAGCAAGTGTG 57.117 40.909 0.00 0.00 42.08 3.82
153 154 3.543680 ACACAAGTAGAGCAAGTGTGT 57.456 42.857 2.05 2.05 45.94 3.72
155 156 4.882671 CACAAGTAGAGCAAGTGTGTTT 57.117 40.909 0.00 0.00 35.86 2.83
156 157 5.235305 CACAAGTAGAGCAAGTGTGTTTT 57.765 39.130 0.00 0.00 35.86 2.43
157 158 5.640732 CACAAGTAGAGCAAGTGTGTTTTT 58.359 37.500 0.00 0.00 35.86 1.94
158 159 6.781138 CACAAGTAGAGCAAGTGTGTTTTTA 58.219 36.000 0.00 0.00 35.86 1.52
159 160 7.247728 CACAAGTAGAGCAAGTGTGTTTTTAA 58.752 34.615 0.00 0.00 35.86 1.52
160 161 7.218204 CACAAGTAGAGCAAGTGTGTTTTTAAC 59.782 37.037 0.00 0.00 35.86 2.01
161 162 6.995511 AGTAGAGCAAGTGTGTTTTTAACA 57.004 33.333 0.00 0.00 39.52 2.41
176 177 8.179148 TGTTTTTAACACAGTACAAATGCAAG 57.821 30.769 0.00 0.00 36.25 4.01
177 178 6.820470 TTTTAACACAGTACAAATGCAAGC 57.180 33.333 0.00 0.00 0.00 4.01
178 179 2.686558 ACACAGTACAAATGCAAGCG 57.313 45.000 0.00 0.00 0.00 4.68
179 180 1.330306 CACAGTACAAATGCAAGCGC 58.670 50.000 0.00 0.00 39.24 5.92
180 181 1.069022 CACAGTACAAATGCAAGCGCT 60.069 47.619 2.64 2.64 39.64 5.92
181 182 1.197721 ACAGTACAAATGCAAGCGCTC 59.802 47.619 12.06 0.00 39.64 5.03
182 183 1.197492 CAGTACAAATGCAAGCGCTCA 59.803 47.619 12.06 5.63 39.64 4.26
183 184 2.086869 AGTACAAATGCAAGCGCTCAT 58.913 42.857 12.06 8.31 39.64 2.90
184 185 3.063861 CAGTACAAATGCAAGCGCTCATA 59.936 43.478 12.06 0.00 39.64 2.15
185 186 3.879295 AGTACAAATGCAAGCGCTCATAT 59.121 39.130 12.06 1.87 39.64 1.78
186 187 5.050159 CAGTACAAATGCAAGCGCTCATATA 60.050 40.000 12.06 2.23 39.64 0.86
187 188 4.214980 ACAAATGCAAGCGCTCATATAC 57.785 40.909 12.06 0.00 39.64 1.47
188 189 3.627123 ACAAATGCAAGCGCTCATATACA 59.373 39.130 12.06 3.20 39.64 2.29
189 190 4.276678 ACAAATGCAAGCGCTCATATACAT 59.723 37.500 12.06 5.66 39.64 2.29
190 191 4.414999 AATGCAAGCGCTCATATACATG 57.585 40.909 12.06 3.22 39.64 3.21
191 192 1.532437 TGCAAGCGCTCATATACATGC 59.468 47.619 12.06 15.35 39.64 4.06
197 198 3.559530 CGCTCATATACATGCGCATAC 57.440 47.619 24.84 3.31 41.94 2.39
198 199 2.923020 CGCTCATATACATGCGCATACA 59.077 45.455 24.84 14.18 41.94 2.29
199 200 3.241773 CGCTCATATACATGCGCATACAC 60.242 47.826 24.84 4.36 41.94 2.90
200 201 3.062639 GCTCATATACATGCGCATACACC 59.937 47.826 24.84 1.08 41.55 4.16
201 202 3.595173 TCATATACATGCGCATACACCC 58.405 45.455 24.84 0.00 31.73 4.61
202 203 2.465860 TATACATGCGCATACACCCC 57.534 50.000 24.84 0.00 0.00 4.95
203 204 0.764890 ATACATGCGCATACACCCCT 59.235 50.000 24.84 0.00 0.00 4.79
204 205 1.415200 TACATGCGCATACACCCCTA 58.585 50.000 24.84 1.21 0.00 3.53
205 206 0.764890 ACATGCGCATACACCCCTAT 59.235 50.000 24.84 0.00 0.00 2.57
206 207 1.159285 CATGCGCATACACCCCTATG 58.841 55.000 24.84 3.96 0.00 2.23
207 208 1.055849 ATGCGCATACACCCCTATGA 58.944 50.000 24.02 0.00 0.00 2.15
208 209 0.392706 TGCGCATACACCCCTATGAG 59.607 55.000 5.66 0.00 0.00 2.90
209 210 0.951040 GCGCATACACCCCTATGAGC 60.951 60.000 0.30 0.17 41.00 4.26
210 211 0.392706 CGCATACACCCCTATGAGCA 59.607 55.000 0.00 0.00 0.00 4.26
211 212 1.873903 CGCATACACCCCTATGAGCAC 60.874 57.143 0.00 0.00 0.00 4.40
212 213 1.543429 GCATACACCCCTATGAGCACC 60.543 57.143 0.00 0.00 0.00 5.01
213 214 2.050144 CATACACCCCTATGAGCACCT 58.950 52.381 0.00 0.00 0.00 4.00
214 215 1.789523 TACACCCCTATGAGCACCTC 58.210 55.000 0.00 0.00 0.00 3.85
215 216 0.043334 ACACCCCTATGAGCACCTCT 59.957 55.000 0.00 0.00 0.00 3.69
216 217 0.467384 CACCCCTATGAGCACCTCTG 59.533 60.000 0.00 0.00 0.00 3.35
217 218 0.339859 ACCCCTATGAGCACCTCTGA 59.660 55.000 0.00 0.00 0.00 3.27
218 219 1.273838 ACCCCTATGAGCACCTCTGAA 60.274 52.381 0.00 0.00 0.00 3.02
219 220 2.053244 CCCCTATGAGCACCTCTGAAT 58.947 52.381 0.00 0.00 0.00 2.57
220 221 2.224475 CCCCTATGAGCACCTCTGAATG 60.224 54.545 0.00 0.00 0.00 2.67
221 222 2.702478 CCCTATGAGCACCTCTGAATGA 59.298 50.000 0.00 0.00 0.00 2.57
222 223 3.494048 CCCTATGAGCACCTCTGAATGAC 60.494 52.174 0.00 0.00 0.00 3.06
223 224 3.387374 CCTATGAGCACCTCTGAATGACT 59.613 47.826 0.00 0.00 0.00 3.41
224 225 2.756840 TGAGCACCTCTGAATGACTG 57.243 50.000 0.00 0.00 0.00 3.51
225 226 2.250924 TGAGCACCTCTGAATGACTGA 58.749 47.619 0.00 0.00 0.00 3.41
226 227 2.233186 TGAGCACCTCTGAATGACTGAG 59.767 50.000 0.00 0.00 41.94 3.35
227 228 1.066286 AGCACCTCTGAATGACTGAGC 60.066 52.381 0.00 0.00 41.28 4.26
228 229 2.011046 GCACCTCTGAATGACTGAGCC 61.011 57.143 0.00 0.00 41.28 4.70
229 230 0.534412 ACCTCTGAATGACTGAGCCG 59.466 55.000 0.00 0.00 41.28 5.52
230 231 0.820226 CCTCTGAATGACTGAGCCGA 59.180 55.000 0.00 0.00 41.28 5.54
231 232 1.470632 CCTCTGAATGACTGAGCCGAC 60.471 57.143 0.00 0.00 41.28 4.79
232 233 1.203287 CTCTGAATGACTGAGCCGACA 59.797 52.381 0.00 0.00 37.65 4.35
233 234 1.827344 TCTGAATGACTGAGCCGACAT 59.173 47.619 0.00 0.00 0.00 3.06
234 235 3.023832 TCTGAATGACTGAGCCGACATA 58.976 45.455 0.00 0.00 0.00 2.29
235 236 3.638627 TCTGAATGACTGAGCCGACATAT 59.361 43.478 0.00 0.00 0.00 1.78
236 237 3.982475 TGAATGACTGAGCCGACATATC 58.018 45.455 0.00 0.00 0.00 1.63
237 238 3.384467 TGAATGACTGAGCCGACATATCA 59.616 43.478 0.00 0.00 0.00 2.15
238 239 4.039609 TGAATGACTGAGCCGACATATCAT 59.960 41.667 0.00 0.00 31.42 2.45
239 240 3.650070 TGACTGAGCCGACATATCATC 57.350 47.619 0.00 0.00 0.00 2.92
240 241 3.225940 TGACTGAGCCGACATATCATCT 58.774 45.455 0.00 0.00 0.00 2.90
241 242 3.638627 TGACTGAGCCGACATATCATCTT 59.361 43.478 0.00 0.00 0.00 2.40
242 243 4.827284 TGACTGAGCCGACATATCATCTTA 59.173 41.667 0.00 0.00 0.00 2.10
243 244 5.301805 TGACTGAGCCGACATATCATCTTAA 59.698 40.000 0.00 0.00 0.00 1.85
244 245 6.161855 ACTGAGCCGACATATCATCTTAAA 57.838 37.500 0.00 0.00 0.00 1.52
245 246 6.582636 ACTGAGCCGACATATCATCTTAAAA 58.417 36.000 0.00 0.00 0.00 1.52
246 247 7.047891 ACTGAGCCGACATATCATCTTAAAAA 58.952 34.615 0.00 0.00 0.00 1.94
247 248 7.716998 ACTGAGCCGACATATCATCTTAAAAAT 59.283 33.333 0.00 0.00 0.00 1.82
248 249 8.450578 TGAGCCGACATATCATCTTAAAAATT 57.549 30.769 0.00 0.00 0.00 1.82
249 250 9.554395 TGAGCCGACATATCATCTTAAAAATTA 57.446 29.630 0.00 0.00 0.00 1.40
261 262 9.226606 TCATCTTAAAAATTATGAAGTCACCGT 57.773 29.630 0.00 0.00 0.00 4.83
275 276 3.437795 CCGTAGGCACCTCGTCGT 61.438 66.667 0.00 0.00 46.14 4.34
276 277 2.099831 CGTAGGCACCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
277 278 2.099831 GTAGGCACCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
278 279 2.046988 TAGGCACCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
279 280 2.393768 TAGGCACCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
280 281 4.034258 GGCACCTCGTCGTCGACA 62.034 66.667 24.13 10.99 41.35 4.35
281 282 2.502080 GCACCTCGTCGTCGACAG 60.502 66.667 24.13 18.50 41.35 3.51
282 283 2.962827 GCACCTCGTCGTCGACAGA 61.963 63.158 24.13 19.27 41.35 3.41
283 284 1.132844 CACCTCGTCGTCGACAGAG 59.867 63.158 26.33 26.33 41.35 3.35
284 285 1.005275 ACCTCGTCGTCGACAGAGA 60.005 57.895 30.87 19.10 41.35 3.10
285 286 1.290491 ACCTCGTCGTCGACAGAGAC 61.290 60.000 30.87 18.55 41.35 3.36
286 287 1.289800 CCTCGTCGTCGACAGAGACA 61.290 60.000 30.87 11.59 41.35 3.41
287 288 0.722282 CTCGTCGTCGACAGAGACAT 59.278 55.000 27.92 0.00 41.35 3.06
288 289 0.720027 TCGTCGTCGACAGAGACATC 59.280 55.000 24.13 1.38 41.35 3.06
289 290 0.722282 CGTCGTCGACAGAGACATCT 59.278 55.000 24.13 0.00 40.98 2.90
290 291 1.267136 CGTCGTCGACAGAGACATCTC 60.267 57.143 24.13 0.26 40.98 2.75
291 292 1.062880 GTCGTCGACAGAGACATCTCC 59.937 57.143 20.28 0.00 43.88 3.71
292 293 1.066071 TCGTCGACAGAGACATCTCCT 60.066 52.381 17.16 0.00 43.88 3.69
293 294 1.329292 CGTCGACAGAGACATCTCCTC 59.671 57.143 17.16 0.50 43.88 3.71
294 295 1.673920 GTCGACAGAGACATCTCCTCC 59.326 57.143 11.55 0.00 43.88 4.30
295 296 1.028905 CGACAGAGACATCTCCTCCC 58.971 60.000 5.25 0.00 43.88 4.30
296 297 1.683319 CGACAGAGACATCTCCTCCCA 60.683 57.143 5.25 0.00 43.88 4.37
297 298 1.754226 GACAGAGACATCTCCTCCCAC 59.246 57.143 5.25 0.00 43.88 4.61
298 299 1.360852 ACAGAGACATCTCCTCCCACT 59.639 52.381 5.25 0.00 43.88 4.00
299 300 1.755959 CAGAGACATCTCCTCCCACTG 59.244 57.143 5.25 0.00 43.88 3.66
300 301 1.643286 AGAGACATCTCCTCCCACTGA 59.357 52.381 5.25 0.00 43.88 3.41
301 302 2.043664 AGAGACATCTCCTCCCACTGAA 59.956 50.000 5.25 0.00 43.88 3.02
302 303 3.037549 GAGACATCTCCTCCCACTGAAT 58.962 50.000 0.00 0.00 37.02 2.57
303 304 2.770802 AGACATCTCCTCCCACTGAATG 59.229 50.000 0.00 0.00 0.00 2.67
304 305 1.211457 ACATCTCCTCCCACTGAATGC 59.789 52.381 0.00 0.00 0.00 3.56
305 306 1.489649 CATCTCCTCCCACTGAATGCT 59.510 52.381 0.00 0.00 0.00 3.79
306 307 1.198713 TCTCCTCCCACTGAATGCTC 58.801 55.000 0.00 0.00 0.00 4.26
307 308 0.907486 CTCCTCCCACTGAATGCTCA 59.093 55.000 0.00 0.00 0.00 4.26
308 309 1.489649 CTCCTCCCACTGAATGCTCAT 59.510 52.381 0.00 0.00 0.00 2.90
309 310 1.487976 TCCTCCCACTGAATGCTCATC 59.512 52.381 0.00 0.00 0.00 2.92
310 311 1.211212 CCTCCCACTGAATGCTCATCA 59.789 52.381 0.00 0.00 0.00 3.07
311 312 2.286872 CTCCCACTGAATGCTCATCAC 58.713 52.381 0.00 0.00 0.00 3.06
312 313 1.065199 TCCCACTGAATGCTCATCACC 60.065 52.381 0.00 0.00 0.00 4.02
313 314 1.012086 CCACTGAATGCTCATCACCG 58.988 55.000 0.00 0.00 0.00 4.94
314 315 1.405933 CCACTGAATGCTCATCACCGA 60.406 52.381 0.00 0.00 0.00 4.69
315 316 2.349590 CACTGAATGCTCATCACCGAA 58.650 47.619 0.00 0.00 0.00 4.30
316 317 2.743664 CACTGAATGCTCATCACCGAAA 59.256 45.455 0.00 0.00 0.00 3.46
317 318 3.376234 CACTGAATGCTCATCACCGAAAT 59.624 43.478 0.00 0.00 0.00 2.17
318 319 4.012374 ACTGAATGCTCATCACCGAAATT 58.988 39.130 0.00 0.00 0.00 1.82
319 320 4.095483 ACTGAATGCTCATCACCGAAATTC 59.905 41.667 0.00 0.00 0.00 2.17
320 321 3.378112 TGAATGCTCATCACCGAAATTCC 59.622 43.478 0.00 0.00 0.00 3.01
321 322 2.787473 TGCTCATCACCGAAATTCCT 57.213 45.000 0.00 0.00 0.00 3.36
322 323 2.358957 TGCTCATCACCGAAATTCCTG 58.641 47.619 0.00 0.00 0.00 3.86
323 324 2.027285 TGCTCATCACCGAAATTCCTGA 60.027 45.455 0.00 0.00 0.00 3.86
324 325 3.009723 GCTCATCACCGAAATTCCTGAA 58.990 45.455 0.00 0.00 0.00 3.02
325 326 3.440173 GCTCATCACCGAAATTCCTGAAA 59.560 43.478 0.00 0.00 0.00 2.69
326 327 4.096984 GCTCATCACCGAAATTCCTGAAAT 59.903 41.667 0.00 0.00 0.00 2.17
327 328 5.296780 GCTCATCACCGAAATTCCTGAAATA 59.703 40.000 0.00 0.00 0.00 1.40
328 329 6.183360 GCTCATCACCGAAATTCCTGAAATAA 60.183 38.462 0.00 0.00 0.00 1.40
329 330 7.469181 GCTCATCACCGAAATTCCTGAAATAAT 60.469 37.037 0.00 0.00 0.00 1.28
330 331 7.930217 TCATCACCGAAATTCCTGAAATAATC 58.070 34.615 0.00 0.00 0.00 1.75
331 332 6.693315 TCACCGAAATTCCTGAAATAATCC 57.307 37.500 0.00 0.00 0.00 3.01
332 333 6.184068 TCACCGAAATTCCTGAAATAATCCA 58.816 36.000 0.00 0.00 0.00 3.41
333 334 6.318648 TCACCGAAATTCCTGAAATAATCCAG 59.681 38.462 0.00 0.00 0.00 3.86
345 346 7.815840 TGAAATAATCCAGGAATAAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
346 347 7.874940 TGAAATAATCCAGGAATAAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
347 348 5.886960 ATAATCCAGGAATAAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
348 349 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
349 350 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
350 351 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
351 352 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
352 353 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
353 354 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
354 355 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
355 356 1.668419 ATAAATGCGAGCACCAGGAC 58.332 50.000 0.00 0.00 0.00 3.85
356 357 0.613260 TAAATGCGAGCACCAGGACT 59.387 50.000 0.00 0.00 0.00 3.85
357 358 0.250901 AAATGCGAGCACCAGGACTT 60.251 50.000 0.00 0.00 0.00 3.01
358 359 0.957395 AATGCGAGCACCAGGACTTG 60.957 55.000 0.00 0.00 0.00 3.16
359 360 1.830587 ATGCGAGCACCAGGACTTGA 61.831 55.000 0.00 0.00 0.00 3.02
360 361 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
361 362 1.569479 GCGAGCACCAGGACTTGAAC 61.569 60.000 0.00 0.00 0.00 3.18
362 363 0.951040 CGAGCACCAGGACTTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
363 364 0.606673 GAGCACCAGGACTTGAACCC 60.607 60.000 0.00 0.00 0.00 4.11
364 365 1.062488 AGCACCAGGACTTGAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
368 369 3.329300 CAGGACTTGAACCCTGGTG 57.671 57.895 0.00 0.00 44.68 4.17
369 370 0.250901 CAGGACTTGAACCCTGGTGG 60.251 60.000 0.00 0.00 44.68 4.61
370 371 0.401395 AGGACTTGAACCCTGGTGGA 60.401 55.000 0.00 0.00 38.00 4.02
371 372 0.250770 GGACTTGAACCCTGGTGGAC 60.251 60.000 0.00 0.00 38.00 4.02
372 373 0.472471 GACTTGAACCCTGGTGGACA 59.528 55.000 0.00 0.00 38.00 4.02
396 397 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
397 398 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
398 399 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
399 400 2.632537 ACCACAGTCCCTCTAACCATT 58.367 47.619 0.00 0.00 0.00 3.16
400 401 2.986728 ACCACAGTCCCTCTAACCATTT 59.013 45.455 0.00 0.00 0.00 2.32
401 402 4.172807 ACCACAGTCCCTCTAACCATTTA 58.827 43.478 0.00 0.00 0.00 1.40
402 403 4.600111 ACCACAGTCCCTCTAACCATTTAA 59.400 41.667 0.00 0.00 0.00 1.52
403 404 5.186198 CCACAGTCCCTCTAACCATTTAAG 58.814 45.833 0.00 0.00 0.00 1.85
404 405 4.636206 CACAGTCCCTCTAACCATTTAAGC 59.364 45.833 0.00 0.00 0.00 3.09
405 406 4.288626 ACAGTCCCTCTAACCATTTAAGCA 59.711 41.667 0.00 0.00 0.00 3.91
406 407 4.636206 CAGTCCCTCTAACCATTTAAGCAC 59.364 45.833 0.00 0.00 0.00 4.40
407 408 4.288626 AGTCCCTCTAACCATTTAAGCACA 59.711 41.667 0.00 0.00 0.00 4.57
408 409 4.636206 GTCCCTCTAACCATTTAAGCACAG 59.364 45.833 0.00 0.00 0.00 3.66
409 410 3.947834 CCCTCTAACCATTTAAGCACAGG 59.052 47.826 0.00 0.00 0.00 4.00
410 411 4.567747 CCCTCTAACCATTTAAGCACAGGT 60.568 45.833 0.00 0.00 0.00 4.00
411 412 5.010282 CCTCTAACCATTTAAGCACAGGTT 58.990 41.667 0.00 0.00 44.23 3.50
412 413 5.106157 CCTCTAACCATTTAAGCACAGGTTG 60.106 44.000 0.00 0.00 42.19 3.77
413 414 4.764823 TCTAACCATTTAAGCACAGGTTGG 59.235 41.667 0.00 0.00 42.19 3.77
414 415 2.957474 ACCATTTAAGCACAGGTTGGT 58.043 42.857 0.00 0.00 37.63 3.67
416 417 3.320826 ACCATTTAAGCACAGGTTGGTTC 59.679 43.478 0.00 0.00 42.45 3.62
417 418 3.564511 CATTTAAGCACAGGTTGGTTCG 58.435 45.455 0.00 0.00 42.45 3.95
418 419 0.948678 TTAAGCACAGGTTGGTTCGC 59.051 50.000 0.00 0.00 42.45 4.70
419 420 0.179043 TAAGCACAGGTTGGTTCGCA 60.179 50.000 0.00 0.00 42.45 5.10
420 421 1.724582 AAGCACAGGTTGGTTCGCAC 61.725 55.000 0.00 0.00 42.45 5.34
421 422 2.477176 GCACAGGTTGGTTCGCACA 61.477 57.895 0.00 0.00 0.00 4.57
422 423 1.648720 CACAGGTTGGTTCGCACAG 59.351 57.895 0.00 0.00 0.00 3.66
423 424 1.525995 ACAGGTTGGTTCGCACAGG 60.526 57.895 0.00 0.00 0.00 4.00
424 425 1.525995 CAGGTTGGTTCGCACAGGT 60.526 57.895 0.00 0.00 0.00 4.00
425 426 1.525995 AGGTTGGTTCGCACAGGTG 60.526 57.895 0.00 0.00 0.00 4.00
426 427 2.551912 GGTTGGTTCGCACAGGTGG 61.552 63.158 1.10 0.00 0.00 4.61
427 428 1.525077 GTTGGTTCGCACAGGTGGA 60.525 57.895 1.10 0.00 0.00 4.02
428 429 1.525077 TTGGTTCGCACAGGTGGAC 60.525 57.895 1.10 0.00 31.91 4.02
429 430 2.110213 GGTTCGCACAGGTGGACA 59.890 61.111 1.10 0.00 34.53 4.02
430 431 1.961277 GGTTCGCACAGGTGGACAG 60.961 63.158 1.10 0.00 34.53 3.51
431 432 1.961277 GTTCGCACAGGTGGACAGG 60.961 63.158 1.10 0.00 33.01 4.00
432 433 3.177194 TTCGCACAGGTGGACAGGG 62.177 63.158 1.10 0.00 0.00 4.45
433 434 4.704833 CGCACAGGTGGACAGGGG 62.705 72.222 1.10 0.00 0.00 4.79
434 435 3.249189 GCACAGGTGGACAGGGGA 61.249 66.667 1.10 0.00 0.00 4.81
435 436 2.606587 GCACAGGTGGACAGGGGAT 61.607 63.158 1.10 0.00 0.00 3.85
436 437 1.271840 GCACAGGTGGACAGGGGATA 61.272 60.000 1.10 0.00 0.00 2.59
437 438 1.511613 CACAGGTGGACAGGGGATAT 58.488 55.000 0.00 0.00 0.00 1.63
438 439 1.417890 CACAGGTGGACAGGGGATATC 59.582 57.143 0.00 0.00 0.00 1.63
439 440 1.009552 ACAGGTGGACAGGGGATATCA 59.990 52.381 4.83 0.00 0.00 2.15
440 441 1.417890 CAGGTGGACAGGGGATATCAC 59.582 57.143 4.83 0.00 0.00 3.06
441 442 1.009552 AGGTGGACAGGGGATATCACA 59.990 52.381 7.40 0.00 0.00 3.58
442 443 1.417890 GGTGGACAGGGGATATCACAG 59.582 57.143 7.40 1.02 0.00 3.66
443 444 2.119495 GTGGACAGGGGATATCACAGT 58.881 52.381 7.40 4.59 0.00 3.55
444 445 2.118679 TGGACAGGGGATATCACAGTG 58.881 52.381 7.40 6.17 0.00 3.66
445 446 2.119495 GGACAGGGGATATCACAGTGT 58.881 52.381 11.07 11.07 0.00 3.55
446 447 2.505819 GGACAGGGGATATCACAGTGTT 59.494 50.000 7.40 0.00 0.00 3.32
447 448 3.054361 GGACAGGGGATATCACAGTGTTT 60.054 47.826 7.40 0.00 0.00 2.83
448 449 3.941483 GACAGGGGATATCACAGTGTTTG 59.059 47.826 7.40 0.00 0.00 2.93
449 450 3.330701 ACAGGGGATATCACAGTGTTTGT 59.669 43.478 7.40 0.00 41.94 2.83
450 451 4.534500 ACAGGGGATATCACAGTGTTTGTA 59.466 41.667 7.40 0.00 38.16 2.41
451 452 5.013704 ACAGGGGATATCACAGTGTTTGTAA 59.986 40.000 7.40 0.00 38.16 2.41
452 453 6.122277 CAGGGGATATCACAGTGTTTGTAAT 58.878 40.000 7.40 0.00 38.16 1.89
453 454 6.260936 CAGGGGATATCACAGTGTTTGTAATC 59.739 42.308 7.40 0.00 38.16 1.75
454 455 5.236478 GGGGATATCACAGTGTTTGTAATCG 59.764 44.000 7.40 0.00 38.16 3.34
455 456 5.815740 GGGATATCACAGTGTTTGTAATCGT 59.184 40.000 4.83 0.00 38.16 3.73
456 457 6.018994 GGGATATCACAGTGTTTGTAATCGTC 60.019 42.308 4.83 0.00 38.16 4.20
457 458 4.903638 ATCACAGTGTTTGTAATCGTCG 57.096 40.909 0.00 0.00 38.16 5.12
458 459 2.473609 TCACAGTGTTTGTAATCGTCGC 59.526 45.455 0.00 0.00 38.16 5.19
459 460 2.475111 CACAGTGTTTGTAATCGTCGCT 59.525 45.455 0.00 0.00 38.16 4.93
460 461 3.671459 CACAGTGTTTGTAATCGTCGCTA 59.329 43.478 0.00 0.00 38.16 4.26
461 462 3.918591 ACAGTGTTTGTAATCGTCGCTAG 59.081 43.478 0.00 0.00 38.56 3.42
462 463 3.303495 CAGTGTTTGTAATCGTCGCTAGG 59.697 47.826 0.00 0.00 0.00 3.02
463 464 3.057033 AGTGTTTGTAATCGTCGCTAGGT 60.057 43.478 0.00 0.00 0.00 3.08
464 465 3.060363 GTGTTTGTAATCGTCGCTAGGTG 59.940 47.826 0.00 0.00 0.00 4.00
465 466 2.572191 TTGTAATCGTCGCTAGGTGG 57.428 50.000 0.00 0.00 0.00 4.61
466 467 1.466856 TGTAATCGTCGCTAGGTGGT 58.533 50.000 0.00 0.00 0.00 4.16
467 468 1.820519 TGTAATCGTCGCTAGGTGGTT 59.179 47.619 0.00 0.00 0.00 3.67
468 469 2.159338 TGTAATCGTCGCTAGGTGGTTC 60.159 50.000 0.00 0.00 0.00 3.62
469 470 0.892755 AATCGTCGCTAGGTGGTTCA 59.107 50.000 0.00 0.00 0.00 3.18
470 471 1.112113 ATCGTCGCTAGGTGGTTCAT 58.888 50.000 0.00 0.00 0.00 2.57
471 472 1.753930 TCGTCGCTAGGTGGTTCATA 58.246 50.000 0.00 0.00 0.00 2.15
472 473 1.674441 TCGTCGCTAGGTGGTTCATAG 59.326 52.381 0.00 0.00 34.06 2.23
473 474 1.674441 CGTCGCTAGGTGGTTCATAGA 59.326 52.381 0.00 0.00 32.86 1.98
474 475 2.541178 CGTCGCTAGGTGGTTCATAGAC 60.541 54.545 0.00 0.00 32.86 2.59
475 476 2.029623 TCGCTAGGTGGTTCATAGACC 58.970 52.381 0.00 0.00 40.23 3.85
476 477 2.032620 CGCTAGGTGGTTCATAGACCT 58.967 52.381 0.00 0.00 42.87 3.85
477 478 2.223829 CGCTAGGTGGTTCATAGACCTG 60.224 54.545 0.00 0.00 40.45 4.00
478 479 2.103263 GCTAGGTGGTTCATAGACCTGG 59.897 54.545 0.00 0.00 40.45 4.45
479 480 2.344093 AGGTGGTTCATAGACCTGGT 57.656 50.000 0.00 0.00 38.73 4.00
480 481 2.632537 AGGTGGTTCATAGACCTGGTT 58.367 47.619 0.00 0.00 38.73 3.67
481 482 2.305927 AGGTGGTTCATAGACCTGGTTG 59.694 50.000 0.00 0.00 38.73 3.77
482 483 2.039879 GGTGGTTCATAGACCTGGTTGT 59.960 50.000 0.00 0.00 40.47 3.32
483 484 3.262405 GGTGGTTCATAGACCTGGTTGTA 59.738 47.826 0.00 0.00 40.47 2.41
484 485 4.263156 GGTGGTTCATAGACCTGGTTGTAA 60.263 45.833 0.00 0.00 40.47 2.41
485 486 5.497474 GTGGTTCATAGACCTGGTTGTAAT 58.503 41.667 0.00 0.00 40.47 1.89
486 487 5.944007 GTGGTTCATAGACCTGGTTGTAATT 59.056 40.000 0.00 0.00 40.47 1.40
487 488 6.433093 GTGGTTCATAGACCTGGTTGTAATTT 59.567 38.462 0.00 0.00 40.47 1.82
488 489 7.007723 TGGTTCATAGACCTGGTTGTAATTTT 58.992 34.615 0.00 0.00 40.47 1.82
489 490 7.507616 TGGTTCATAGACCTGGTTGTAATTTTT 59.492 33.333 0.00 0.00 40.47 1.94
490 491 7.812669 GGTTCATAGACCTGGTTGTAATTTTTG 59.187 37.037 0.00 0.00 36.73 2.44
491 492 8.357402 GTTCATAGACCTGGTTGTAATTTTTGT 58.643 33.333 0.00 0.00 0.00 2.83
492 493 8.472007 TCATAGACCTGGTTGTAATTTTTGTT 57.528 30.769 0.00 0.00 0.00 2.83
493 494 9.575868 TCATAGACCTGGTTGTAATTTTTGTTA 57.424 29.630 0.00 0.00 0.00 2.41
494 495 9.620660 CATAGACCTGGTTGTAATTTTTGTTAC 57.379 33.333 0.00 0.00 35.60 2.50
495 496 7.046292 AGACCTGGTTGTAATTTTTGTTACC 57.954 36.000 0.00 0.00 34.43 2.85
496 497 6.837048 AGACCTGGTTGTAATTTTTGTTACCT 59.163 34.615 0.00 0.00 34.43 3.08
497 498 7.343574 AGACCTGGTTGTAATTTTTGTTACCTT 59.656 33.333 0.00 0.00 34.43 3.50
498 499 7.853299 ACCTGGTTGTAATTTTTGTTACCTTT 58.147 30.769 0.00 0.00 34.43 3.11
499 500 8.322828 ACCTGGTTGTAATTTTTGTTACCTTTT 58.677 29.630 0.00 0.00 34.43 2.27
500 501 8.608317 CCTGGTTGTAATTTTTGTTACCTTTTG 58.392 33.333 0.00 0.00 34.43 2.44
501 502 9.157104 CTGGTTGTAATTTTTGTTACCTTTTGT 57.843 29.630 0.00 0.00 34.43 2.83
502 503 8.936864 TGGTTGTAATTTTTGTTACCTTTTGTG 58.063 29.630 0.00 0.00 34.43 3.33
503 504 8.937884 GGTTGTAATTTTTGTTACCTTTTGTGT 58.062 29.630 0.00 0.00 34.43 3.72
506 507 9.930693 TGTAATTTTTGTTACCTTTTGTGTTCT 57.069 25.926 0.00 0.00 34.43 3.01
509 510 8.702163 ATTTTTGTTACCTTTTGTGTTCTCTG 57.298 30.769 0.00 0.00 0.00 3.35
510 511 6.827586 TTTGTTACCTTTTGTGTTCTCTGT 57.172 33.333 0.00 0.00 0.00 3.41
511 512 7.925043 TTTGTTACCTTTTGTGTTCTCTGTA 57.075 32.000 0.00 0.00 0.00 2.74
512 513 6.913873 TGTTACCTTTTGTGTTCTCTGTAC 57.086 37.500 0.00 0.00 0.00 2.90
513 514 6.646267 TGTTACCTTTTGTGTTCTCTGTACT 58.354 36.000 0.00 0.00 0.00 2.73
514 515 6.537301 TGTTACCTTTTGTGTTCTCTGTACTG 59.463 38.462 0.00 0.00 0.00 2.74
515 516 3.877508 ACCTTTTGTGTTCTCTGTACTGC 59.122 43.478 0.00 0.00 0.00 4.40
516 517 3.251004 CCTTTTGTGTTCTCTGTACTGCC 59.749 47.826 0.00 0.00 0.00 4.85
517 518 3.552132 TTTGTGTTCTCTGTACTGCCA 57.448 42.857 0.00 0.00 0.00 4.92
518 519 3.769739 TTGTGTTCTCTGTACTGCCAT 57.230 42.857 0.00 0.00 0.00 4.40
519 520 3.044235 TGTGTTCTCTGTACTGCCATG 57.956 47.619 0.00 0.00 0.00 3.66
520 521 2.632512 TGTGTTCTCTGTACTGCCATGA 59.367 45.455 0.00 0.00 0.00 3.07
521 522 3.261643 TGTGTTCTCTGTACTGCCATGAT 59.738 43.478 0.00 0.00 0.00 2.45
522 523 4.256920 GTGTTCTCTGTACTGCCATGATT 58.743 43.478 0.00 0.00 0.00 2.57
523 524 5.046663 TGTGTTCTCTGTACTGCCATGATTA 60.047 40.000 0.00 0.00 0.00 1.75
524 525 5.874810 GTGTTCTCTGTACTGCCATGATTAA 59.125 40.000 0.00 0.00 0.00 1.40
525 526 6.540189 GTGTTCTCTGTACTGCCATGATTAAT 59.460 38.462 0.00 0.00 0.00 1.40
526 527 6.539826 TGTTCTCTGTACTGCCATGATTAATG 59.460 38.462 0.00 0.00 35.89 1.90
527 528 6.484364 TCTCTGTACTGCCATGATTAATGA 57.516 37.500 0.00 0.00 38.72 2.57
528 529 6.888105 TCTCTGTACTGCCATGATTAATGAA 58.112 36.000 0.00 0.00 38.72 2.57
529 530 7.512130 TCTCTGTACTGCCATGATTAATGAAT 58.488 34.615 0.00 0.00 38.72 2.57
530 531 8.650490 TCTCTGTACTGCCATGATTAATGAATA 58.350 33.333 0.00 0.00 38.72 1.75
531 532 8.837788 TCTGTACTGCCATGATTAATGAATAG 57.162 34.615 0.00 0.00 38.72 1.73
532 533 8.650490 TCTGTACTGCCATGATTAATGAATAGA 58.350 33.333 0.00 0.00 38.72 1.98
533 534 9.445878 CTGTACTGCCATGATTAATGAATAGAT 57.554 33.333 0.00 0.00 38.72 1.98
534 535 9.797642 TGTACTGCCATGATTAATGAATAGATT 57.202 29.630 0.00 0.00 38.72 2.40
536 537 8.929260 ACTGCCATGATTAATGAATAGATTGA 57.071 30.769 0.00 0.00 38.72 2.57
537 538 9.358406 ACTGCCATGATTAATGAATAGATTGAA 57.642 29.630 0.00 0.00 38.72 2.69
583 584 5.243426 TGGAACAACAAAACAAGTAGAGC 57.757 39.130 0.00 0.00 31.92 4.09
589 590 5.125417 ACAACAAAACAAGTAGAGCATGTGT 59.875 36.000 0.00 0.00 0.00 3.72
628 629 1.593006 GGAATACCACGCGAGACAATG 59.407 52.381 15.93 0.00 35.97 2.82
634 635 1.082117 CACGCGAGACAATGGGGTAC 61.082 60.000 15.93 0.00 31.43 3.34
666 667 5.169295 CGGTGGTTACCTTTTTGTGAAAAA 58.831 37.500 2.07 0.00 45.22 1.94
728 730 9.688592 GATTTTTGATTTTCATGTTCAGTCTCT 57.311 29.630 0.00 0.00 0.00 3.10
729 731 9.688592 ATTTTTGATTTTCATGTTCAGTCTCTC 57.311 29.630 0.00 0.00 0.00 3.20
730 732 6.808008 TTGATTTTCATGTTCAGTCTCTCC 57.192 37.500 0.00 0.00 0.00 3.71
731 733 5.868454 TGATTTTCATGTTCAGTCTCTCCA 58.132 37.500 0.00 0.00 0.00 3.86
828 833 2.106684 GGATCCTCCCCTCCATACAAAC 59.893 54.545 3.84 0.00 0.00 2.93
830 835 1.200519 CCTCCCCTCCATACAAACGA 58.799 55.000 0.00 0.00 0.00 3.85
846 851 3.460857 AACGAAGCACAACTCTTCTCT 57.539 42.857 0.00 0.00 38.17 3.10
922 935 1.066286 CCTCCACAGCTCTTCTCCTTG 60.066 57.143 0.00 0.00 0.00 3.61
929 942 1.899142 AGCTCTTCTCCTTGTCTCCAC 59.101 52.381 0.00 0.00 0.00 4.02
1056 1069 0.746923 GGCACCTCCCGTAATTCACC 60.747 60.000 0.00 0.00 0.00 4.02
1061 1074 1.656652 CTCCCGTAATTCACCAGCTG 58.343 55.000 6.78 6.78 0.00 4.24
1492 1507 2.022754 GCGCTACTGTCTAAGAGGGGA 61.023 57.143 0.00 0.00 0.00 4.81
1742 1763 2.871096 AACCAATCAGAGCGGGTAAA 57.129 45.000 0.00 0.00 32.21 2.01
1756 1777 0.458025 GGTAAAGCCCTGACGACTCG 60.458 60.000 0.00 0.00 0.00 4.18
1779 1800 3.441572 CCCATTCCAGTGTTGATCTGTTC 59.558 47.826 0.00 0.00 0.00 3.18
1897 1918 4.116747 AGGTATCAGAGAAGTTTCTGCG 57.883 45.455 0.00 0.00 43.39 5.18
1928 1949 7.995289 ACTTGTGTTCTTGAATCATTGTTACA 58.005 30.769 0.00 0.00 0.00 2.41
2110 2131 0.605860 AGCACGGTACTCGACTGACT 60.606 55.000 10.17 0.58 42.43 3.41
2112 2133 0.454620 CACGGTACTCGACTGACTGC 60.455 60.000 10.17 0.00 42.43 4.40
2142 2163 2.158914 TCGGTTCAGATCATGTGGATGG 60.159 50.000 0.00 0.00 36.00 3.51
2177 2198 0.548031 CCATGATGTACCCTGGTGCT 59.452 55.000 5.99 0.00 0.00 4.40
2259 2280 1.093159 CCTTAGCCAGCTGCAAAGAG 58.907 55.000 8.66 1.89 44.83 2.85
2321 2342 2.053244 AGGGTCCAATCTCCAGCTATG 58.947 52.381 0.00 0.00 0.00 2.23
2416 2449 2.393271 ACAGCAGCATCTCAGGTTAC 57.607 50.000 0.00 0.00 0.00 2.50
2486 2519 1.135199 GCTTACGGTGTCGATTCCTCA 60.135 52.381 0.00 0.00 40.11 3.86
2495 2528 1.220206 CGATTCCTCACAGCTGCCT 59.780 57.895 15.27 0.00 0.00 4.75
2586 2619 2.600729 CCAGCTTCAGGACCCTGCT 61.601 63.158 11.11 2.55 43.31 4.24
2729 2764 5.186198 ACTGAAACTCCAATAGGCATGTAC 58.814 41.667 0.00 0.00 33.74 2.90
2868 3045 7.686438 TGAAATGTACTACATGCTGTCATTT 57.314 32.000 17.76 17.76 37.97 2.32
2895 3072 2.645411 GCTTAAGCGCATGCACTTG 58.355 52.632 27.08 14.68 46.23 3.16
3105 3282 4.135747 AGTTCACAAACAATTGGGTTGG 57.864 40.909 21.34 13.56 40.95 3.77
3128 3305 0.179153 TCGCTCTCTTGATGCAGACG 60.179 55.000 0.00 0.00 0.00 4.18
3171 3348 3.937706 ACTTGCATGAGATCAGCAACTAC 59.062 43.478 6.60 0.00 42.71 2.73
3211 3388 8.180165 AGTAATACCCAGATGAGATCCTTGATA 58.820 37.037 0.00 0.00 0.00 2.15
3212 3389 8.986991 GTAATACCCAGATGAGATCCTTGATAT 58.013 37.037 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.531622 TTAACACACGAACTATCCGATAAAAA 57.468 30.769 0.00 0.00 0.00 1.94
6 7 8.597227 CATTAACACACGAACTATCCGATAAAA 58.403 33.333 0.00 0.00 0.00 1.52
7 8 7.975058 TCATTAACACACGAACTATCCGATAAA 59.025 33.333 0.00 0.00 0.00 1.40
8 9 7.482474 TCATTAACACACGAACTATCCGATAA 58.518 34.615 0.00 0.00 0.00 1.75
9 10 7.030075 TCATTAACACACGAACTATCCGATA 57.970 36.000 0.00 0.00 0.00 2.92
10 11 5.898174 TCATTAACACACGAACTATCCGAT 58.102 37.500 0.00 0.00 0.00 4.18
11 12 5.313520 TCATTAACACACGAACTATCCGA 57.686 39.130 0.00 0.00 0.00 4.55
12 13 7.136772 TCTATCATTAACACACGAACTATCCG 58.863 38.462 0.00 0.00 0.00 4.18
16 17 9.406828 GCATATCTATCATTAACACACGAACTA 57.593 33.333 0.00 0.00 0.00 2.24
17 18 7.926018 TGCATATCTATCATTAACACACGAACT 59.074 33.333 0.00 0.00 0.00 3.01
18 19 8.072238 TGCATATCTATCATTAACACACGAAC 57.928 34.615 0.00 0.00 0.00 3.95
19 20 8.141268 TCTGCATATCTATCATTAACACACGAA 58.859 33.333 0.00 0.00 0.00 3.85
20 21 7.657336 TCTGCATATCTATCATTAACACACGA 58.343 34.615 0.00 0.00 0.00 4.35
21 22 7.062722 CCTCTGCATATCTATCATTAACACACG 59.937 40.741 0.00 0.00 0.00 4.49
22 23 7.875041 ACCTCTGCATATCTATCATTAACACAC 59.125 37.037 0.00 0.00 0.00 3.82
23 24 7.966812 ACCTCTGCATATCTATCATTAACACA 58.033 34.615 0.00 0.00 0.00 3.72
24 25 8.090831 TGACCTCTGCATATCTATCATTAACAC 58.909 37.037 0.00 0.00 0.00 3.32
25 26 8.193953 TGACCTCTGCATATCTATCATTAACA 57.806 34.615 0.00 0.00 0.00 2.41
26 27 8.526978 TCTGACCTCTGCATATCTATCATTAAC 58.473 37.037 0.00 0.00 0.00 2.01
27 28 8.655935 TCTGACCTCTGCATATCTATCATTAA 57.344 34.615 0.00 0.00 0.00 1.40
28 29 8.693625 CATCTGACCTCTGCATATCTATCATTA 58.306 37.037 0.00 0.00 0.00 1.90
29 30 7.180587 ACATCTGACCTCTGCATATCTATCATT 59.819 37.037 0.00 0.00 0.00 2.57
30 31 6.668718 ACATCTGACCTCTGCATATCTATCAT 59.331 38.462 0.00 0.00 0.00 2.45
31 32 6.015282 ACATCTGACCTCTGCATATCTATCA 58.985 40.000 0.00 0.00 0.00 2.15
32 33 6.528537 ACATCTGACCTCTGCATATCTATC 57.471 41.667 0.00 0.00 0.00 2.08
33 34 6.269538 ACAACATCTGACCTCTGCATATCTAT 59.730 38.462 0.00 0.00 0.00 1.98
34 35 5.600069 ACAACATCTGACCTCTGCATATCTA 59.400 40.000 0.00 0.00 0.00 1.98
35 36 4.408270 ACAACATCTGACCTCTGCATATCT 59.592 41.667 0.00 0.00 0.00 1.98
36 37 4.701765 ACAACATCTGACCTCTGCATATC 58.298 43.478 0.00 0.00 0.00 1.63
37 38 4.162888 TGACAACATCTGACCTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
38 39 3.515104 TGACAACATCTGACCTCTGCATA 59.485 43.478 0.00 0.00 0.00 3.14
39 40 2.303890 TGACAACATCTGACCTCTGCAT 59.696 45.455 0.00 0.00 0.00 3.96
40 41 1.693606 TGACAACATCTGACCTCTGCA 59.306 47.619 0.00 0.00 0.00 4.41
41 42 2.462456 TGACAACATCTGACCTCTGC 57.538 50.000 0.00 0.00 0.00 4.26
42 43 4.572909 TGATTGACAACATCTGACCTCTG 58.427 43.478 0.00 0.00 0.00 3.35
43 44 4.897509 TGATTGACAACATCTGACCTCT 57.102 40.909 0.00 0.00 0.00 3.69
44 45 5.181009 TCATGATTGACAACATCTGACCTC 58.819 41.667 0.00 0.00 0.00 3.85
45 46 5.169992 TCATGATTGACAACATCTGACCT 57.830 39.130 0.00 0.00 0.00 3.85
46 47 6.446781 AATCATGATTGACAACATCTGACC 57.553 37.500 20.11 0.00 33.85 4.02
60 61 4.406648 TCTAGCGGACACAATCATGATT 57.593 40.909 15.36 15.36 0.00 2.57
61 62 4.313282 CATCTAGCGGACACAATCATGAT 58.687 43.478 1.18 1.18 0.00 2.45
62 63 3.721035 CATCTAGCGGACACAATCATGA 58.279 45.455 0.00 0.00 0.00 3.07
63 64 2.222678 GCATCTAGCGGACACAATCATG 59.777 50.000 0.00 0.00 0.00 3.07
64 65 2.487934 GCATCTAGCGGACACAATCAT 58.512 47.619 0.00 0.00 0.00 2.45
65 66 1.939974 GCATCTAGCGGACACAATCA 58.060 50.000 0.00 0.00 0.00 2.57
109 110 9.959721 TGTTTTCCTACTATGATAAAAGAAGCT 57.040 29.630 0.00 0.00 0.00 3.74
110 111 9.989869 GTGTTTTCCTACTATGATAAAAGAAGC 57.010 33.333 0.00 0.00 0.00 3.86
119 120 7.982354 GCTCTACTTGTGTTTTCCTACTATGAT 59.018 37.037 0.00 0.00 0.00 2.45
120 121 7.039293 TGCTCTACTTGTGTTTTCCTACTATGA 60.039 37.037 0.00 0.00 0.00 2.15
121 122 7.097192 TGCTCTACTTGTGTTTTCCTACTATG 58.903 38.462 0.00 0.00 0.00 2.23
122 123 7.241042 TGCTCTACTTGTGTTTTCCTACTAT 57.759 36.000 0.00 0.00 0.00 2.12
123 124 6.659745 TGCTCTACTTGTGTTTTCCTACTA 57.340 37.500 0.00 0.00 0.00 1.82
124 125 5.546621 TGCTCTACTTGTGTTTTCCTACT 57.453 39.130 0.00 0.00 0.00 2.57
125 126 5.758784 ACTTGCTCTACTTGTGTTTTCCTAC 59.241 40.000 0.00 0.00 0.00 3.18
126 127 5.758296 CACTTGCTCTACTTGTGTTTTCCTA 59.242 40.000 0.00 0.00 0.00 2.94
127 128 4.576463 CACTTGCTCTACTTGTGTTTTCCT 59.424 41.667 0.00 0.00 0.00 3.36
128 129 4.335594 ACACTTGCTCTACTTGTGTTTTCC 59.664 41.667 0.00 0.00 38.51 3.13
129 130 5.163754 ACACACTTGCTCTACTTGTGTTTTC 60.164 40.000 0.00 0.00 46.67 2.29
130 131 4.700213 ACACACTTGCTCTACTTGTGTTTT 59.300 37.500 0.00 0.00 46.67 2.43
131 132 4.261801 ACACACTTGCTCTACTTGTGTTT 58.738 39.130 0.00 0.00 46.67 2.83
132 133 3.873910 ACACACTTGCTCTACTTGTGTT 58.126 40.909 0.00 0.00 46.67 3.32
133 134 3.543680 ACACACTTGCTCTACTTGTGT 57.456 42.857 0.00 0.00 44.58 3.72
134 135 4.882671 AAACACACTTGCTCTACTTGTG 57.117 40.909 0.00 0.00 42.68 3.33
135 136 5.897377 AAAAACACACTTGCTCTACTTGT 57.103 34.783 0.00 0.00 0.00 3.16
136 137 7.247728 TGTTAAAAACACACTTGCTCTACTTG 58.752 34.615 0.00 0.00 36.25 3.16
137 138 7.385778 TGTTAAAAACACACTTGCTCTACTT 57.614 32.000 0.00 0.00 36.25 2.24
138 139 6.995511 TGTTAAAAACACACTTGCTCTACT 57.004 33.333 0.00 0.00 36.25 2.57
151 152 7.201478 GCTTGCATTTGTACTGTGTTAAAAACA 60.201 33.333 0.00 0.00 39.52 2.83
152 153 7.116819 GCTTGCATTTGTACTGTGTTAAAAAC 58.883 34.615 0.00 0.00 0.00 2.43
153 154 6.020281 CGCTTGCATTTGTACTGTGTTAAAAA 60.020 34.615 0.00 0.00 0.00 1.94
154 155 5.457148 CGCTTGCATTTGTACTGTGTTAAAA 59.543 36.000 0.00 0.00 0.00 1.52
155 156 4.973051 CGCTTGCATTTGTACTGTGTTAAA 59.027 37.500 0.00 0.00 0.00 1.52
156 157 4.532276 CGCTTGCATTTGTACTGTGTTAA 58.468 39.130 0.00 0.00 0.00 2.01
157 158 3.608241 GCGCTTGCATTTGTACTGTGTTA 60.608 43.478 0.00 0.00 38.92 2.41
158 159 2.858260 GCGCTTGCATTTGTACTGTGTT 60.858 45.455 0.00 0.00 38.92 3.32
159 160 1.334960 GCGCTTGCATTTGTACTGTGT 60.335 47.619 0.00 0.00 38.92 3.72
160 161 1.069022 AGCGCTTGCATTTGTACTGTG 60.069 47.619 2.64 0.00 42.66 3.66
161 162 1.197721 GAGCGCTTGCATTTGTACTGT 59.802 47.619 13.26 0.00 42.66 3.55
162 163 1.197492 TGAGCGCTTGCATTTGTACTG 59.803 47.619 13.26 0.00 42.66 2.74
163 164 1.522668 TGAGCGCTTGCATTTGTACT 58.477 45.000 13.26 0.00 42.66 2.73
164 165 2.549633 ATGAGCGCTTGCATTTGTAC 57.450 45.000 13.26 0.00 42.66 2.90
165 166 4.813697 TGTATATGAGCGCTTGCATTTGTA 59.186 37.500 13.26 3.26 42.66 2.41
166 167 3.627123 TGTATATGAGCGCTTGCATTTGT 59.373 39.130 13.26 4.20 42.66 2.83
167 168 4.213596 TGTATATGAGCGCTTGCATTTG 57.786 40.909 13.26 0.00 42.66 2.32
168 169 4.790878 CATGTATATGAGCGCTTGCATTT 58.209 39.130 13.26 9.28 42.66 2.32
169 170 3.365666 GCATGTATATGAGCGCTTGCATT 60.366 43.478 13.26 5.33 36.51 3.56
170 171 2.161012 GCATGTATATGAGCGCTTGCAT 59.839 45.455 13.26 14.41 36.51 3.96
171 172 1.532437 GCATGTATATGAGCGCTTGCA 59.468 47.619 13.26 6.25 36.51 4.08
172 173 1.463034 CGCATGTATATGAGCGCTTGC 60.463 52.381 13.26 14.20 43.80 4.01
173 174 2.498961 CGCATGTATATGAGCGCTTG 57.501 50.000 13.26 3.84 43.80 4.01
179 180 3.618594 GGGTGTATGCGCATGTATATGAG 59.381 47.826 32.48 0.87 36.36 2.90
180 181 3.595173 GGGTGTATGCGCATGTATATGA 58.405 45.455 32.48 8.02 36.36 2.15
181 182 2.677836 GGGGTGTATGCGCATGTATATG 59.322 50.000 32.48 0.00 37.36 1.78
182 183 2.571653 AGGGGTGTATGCGCATGTATAT 59.428 45.455 32.48 8.85 0.00 0.86
183 184 1.974957 AGGGGTGTATGCGCATGTATA 59.025 47.619 32.48 10.12 0.00 1.47
184 185 0.764890 AGGGGTGTATGCGCATGTAT 59.235 50.000 32.48 10.13 0.00 2.29
185 186 1.415200 TAGGGGTGTATGCGCATGTA 58.585 50.000 32.48 17.97 0.00 2.29
186 187 0.764890 ATAGGGGTGTATGCGCATGT 59.235 50.000 32.48 11.40 0.00 3.21
187 188 1.159285 CATAGGGGTGTATGCGCATG 58.841 55.000 32.48 9.63 0.00 4.06
188 189 1.002430 CTCATAGGGGTGTATGCGCAT 59.998 52.381 28.23 28.23 31.42 4.73
189 190 0.392706 CTCATAGGGGTGTATGCGCA 59.607 55.000 14.96 14.96 31.42 6.09
190 191 0.951040 GCTCATAGGGGTGTATGCGC 60.951 60.000 0.00 0.00 34.82 6.09
191 192 0.392706 TGCTCATAGGGGTGTATGCG 59.607 55.000 0.00 0.00 31.42 4.73
192 193 1.543429 GGTGCTCATAGGGGTGTATGC 60.543 57.143 0.00 0.00 31.42 3.14
193 194 2.037772 GAGGTGCTCATAGGGGTGTATG 59.962 54.545 0.00 0.00 0.00 2.39
194 195 2.090494 AGAGGTGCTCATAGGGGTGTAT 60.090 50.000 0.00 0.00 32.06 2.29
195 196 1.291033 AGAGGTGCTCATAGGGGTGTA 59.709 52.381 0.00 0.00 32.06 2.90
196 197 0.043334 AGAGGTGCTCATAGGGGTGT 59.957 55.000 0.00 0.00 32.06 4.16
197 198 0.467384 CAGAGGTGCTCATAGGGGTG 59.533 60.000 0.00 0.00 32.06 4.61
198 199 0.339859 TCAGAGGTGCTCATAGGGGT 59.660 55.000 0.00 0.00 32.06 4.95
199 200 1.500474 TTCAGAGGTGCTCATAGGGG 58.500 55.000 0.00 0.00 32.06 4.79
200 201 2.702478 TCATTCAGAGGTGCTCATAGGG 59.298 50.000 0.00 0.00 32.06 3.53
201 202 3.387374 AGTCATTCAGAGGTGCTCATAGG 59.613 47.826 0.00 0.00 32.06 2.57
202 203 4.099113 TCAGTCATTCAGAGGTGCTCATAG 59.901 45.833 0.00 0.00 32.06 2.23
203 204 4.026052 TCAGTCATTCAGAGGTGCTCATA 58.974 43.478 0.00 0.00 32.06 2.15
204 205 2.836372 TCAGTCATTCAGAGGTGCTCAT 59.164 45.455 0.00 0.00 32.06 2.90
205 206 2.233186 CTCAGTCATTCAGAGGTGCTCA 59.767 50.000 0.00 0.00 32.06 4.26
206 207 2.891112 CTCAGTCATTCAGAGGTGCTC 58.109 52.381 0.00 0.00 0.00 4.26
207 208 1.066286 GCTCAGTCATTCAGAGGTGCT 60.066 52.381 0.00 0.00 31.57 4.40
208 209 1.367659 GCTCAGTCATTCAGAGGTGC 58.632 55.000 0.00 0.00 31.57 5.01
209 210 1.738365 CGGCTCAGTCATTCAGAGGTG 60.738 57.143 0.00 0.00 31.57 4.00
210 211 0.534412 CGGCTCAGTCATTCAGAGGT 59.466 55.000 0.00 0.00 31.57 3.85
211 212 0.820226 TCGGCTCAGTCATTCAGAGG 59.180 55.000 0.00 0.00 31.57 3.69
212 213 1.203287 TGTCGGCTCAGTCATTCAGAG 59.797 52.381 0.00 0.00 33.62 3.35
213 214 1.256812 TGTCGGCTCAGTCATTCAGA 58.743 50.000 0.00 0.00 0.00 3.27
214 215 2.306341 ATGTCGGCTCAGTCATTCAG 57.694 50.000 0.00 0.00 0.00 3.02
215 216 3.384467 TGATATGTCGGCTCAGTCATTCA 59.616 43.478 0.00 0.00 0.00 2.57
216 217 3.982475 TGATATGTCGGCTCAGTCATTC 58.018 45.455 0.00 0.00 0.00 2.67
217 218 4.282957 AGATGATATGTCGGCTCAGTCATT 59.717 41.667 0.00 0.00 31.56 2.57
218 219 3.831333 AGATGATATGTCGGCTCAGTCAT 59.169 43.478 0.00 0.00 32.95 3.06
219 220 3.225940 AGATGATATGTCGGCTCAGTCA 58.774 45.455 0.00 0.00 0.00 3.41
220 221 3.932545 AGATGATATGTCGGCTCAGTC 57.067 47.619 0.00 0.00 0.00 3.51
221 222 5.791336 TTAAGATGATATGTCGGCTCAGT 57.209 39.130 0.00 0.00 0.00 3.41
222 223 7.482654 TTTTTAAGATGATATGTCGGCTCAG 57.517 36.000 0.00 0.00 0.00 3.35
223 224 8.450578 AATTTTTAAGATGATATGTCGGCTCA 57.549 30.769 0.00 0.00 0.00 4.26
235 236 9.226606 ACGGTGACTTCATAATTTTTAAGATGA 57.773 29.630 0.00 0.00 0.00 2.92
238 239 9.158233 CCTACGGTGACTTCATAATTTTTAAGA 57.842 33.333 0.00 0.00 0.00 2.10
239 240 7.908601 GCCTACGGTGACTTCATAATTTTTAAG 59.091 37.037 0.00 0.00 0.00 1.85
240 241 7.390996 TGCCTACGGTGACTTCATAATTTTTAA 59.609 33.333 0.00 0.00 0.00 1.52
241 242 6.879993 TGCCTACGGTGACTTCATAATTTTTA 59.120 34.615 0.00 0.00 0.00 1.52
242 243 5.708230 TGCCTACGGTGACTTCATAATTTTT 59.292 36.000 0.00 0.00 0.00 1.94
243 244 5.123344 GTGCCTACGGTGACTTCATAATTTT 59.877 40.000 0.00 0.00 0.00 1.82
244 245 4.634443 GTGCCTACGGTGACTTCATAATTT 59.366 41.667 0.00 0.00 0.00 1.82
245 246 4.189231 GTGCCTACGGTGACTTCATAATT 58.811 43.478 0.00 0.00 0.00 1.40
246 247 3.431766 GGTGCCTACGGTGACTTCATAAT 60.432 47.826 0.00 0.00 0.00 1.28
247 248 2.093869 GGTGCCTACGGTGACTTCATAA 60.094 50.000 0.00 0.00 0.00 1.90
248 249 1.479323 GGTGCCTACGGTGACTTCATA 59.521 52.381 0.00 0.00 0.00 2.15
249 250 0.249398 GGTGCCTACGGTGACTTCAT 59.751 55.000 0.00 0.00 0.00 2.57
250 251 0.830444 AGGTGCCTACGGTGACTTCA 60.830 55.000 0.00 0.00 0.00 3.02
251 252 0.108756 GAGGTGCCTACGGTGACTTC 60.109 60.000 0.00 0.00 0.00 3.01
252 253 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
253 254 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
254 255 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
255 256 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
256 257 2.181021 GACGAGGTGCCTACGGTG 59.819 66.667 12.22 0.00 0.00 4.94
257 258 3.437795 CGACGAGGTGCCTACGGT 61.438 66.667 12.22 3.01 0.00 4.83
258 259 3.392595 GACGACGAGGTGCCTACGG 62.393 68.421 0.00 1.18 0.00 4.02
259 260 2.099831 GACGACGAGGTGCCTACG 59.900 66.667 0.00 9.22 0.00 3.51
260 261 2.099831 CGACGACGAGGTGCCTAC 59.900 66.667 0.00 0.00 42.66 3.18
261 262 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
268 269 5.343695 GAGATGTCTCTGTCGACGACGAG 62.344 56.522 28.27 28.27 43.07 4.18
269 270 0.720027 GATGTCTCTGTCGACGACGA 59.280 55.000 22.06 19.30 46.56 4.20
270 271 0.722282 AGATGTCTCTGTCGACGACG 59.278 55.000 22.06 16.44 36.71 5.12
271 272 1.062880 GGAGATGTCTCTGTCGACGAC 59.937 57.143 20.97 20.97 42.48 4.34
272 273 1.066071 AGGAGATGTCTCTGTCGACGA 60.066 52.381 11.62 10.20 42.48 4.20
273 274 1.329292 GAGGAGATGTCTCTGTCGACG 59.671 57.143 11.62 6.07 42.48 5.12
274 275 1.673920 GGAGGAGATGTCTCTGTCGAC 59.326 57.143 9.11 9.11 42.48 4.20
275 276 1.408961 GGGAGGAGATGTCTCTGTCGA 60.409 57.143 9.68 0.00 42.48 4.20
276 277 1.028905 GGGAGGAGATGTCTCTGTCG 58.971 60.000 9.68 0.00 42.48 4.35
277 278 1.754226 GTGGGAGGAGATGTCTCTGTC 59.246 57.143 9.68 7.06 42.48 3.51
278 279 1.360852 AGTGGGAGGAGATGTCTCTGT 59.639 52.381 9.68 0.00 42.48 3.41
279 280 1.755959 CAGTGGGAGGAGATGTCTCTG 59.244 57.143 9.68 0.00 42.48 3.35
280 281 1.643286 TCAGTGGGAGGAGATGTCTCT 59.357 52.381 9.68 0.00 42.48 3.10
281 282 2.151502 TCAGTGGGAGGAGATGTCTC 57.848 55.000 1.33 1.33 42.14 3.36
282 283 2.630889 TTCAGTGGGAGGAGATGTCT 57.369 50.000 0.00 0.00 0.00 3.41
283 284 2.744494 GCATTCAGTGGGAGGAGATGTC 60.744 54.545 0.00 0.00 0.00 3.06
284 285 1.211457 GCATTCAGTGGGAGGAGATGT 59.789 52.381 0.00 0.00 0.00 3.06
285 286 1.489649 AGCATTCAGTGGGAGGAGATG 59.510 52.381 0.00 0.00 0.00 2.90
286 287 1.767681 GAGCATTCAGTGGGAGGAGAT 59.232 52.381 0.00 0.00 0.00 2.75
287 288 1.198713 GAGCATTCAGTGGGAGGAGA 58.801 55.000 0.00 0.00 0.00 3.71
288 289 0.907486 TGAGCATTCAGTGGGAGGAG 59.093 55.000 0.00 0.00 0.00 3.69
289 290 1.487976 GATGAGCATTCAGTGGGAGGA 59.512 52.381 0.00 0.00 36.61 3.71
290 291 1.211212 TGATGAGCATTCAGTGGGAGG 59.789 52.381 0.00 0.00 36.61 4.30
291 292 2.286872 GTGATGAGCATTCAGTGGGAG 58.713 52.381 0.00 0.00 36.61 4.30
292 293 1.065199 GGTGATGAGCATTCAGTGGGA 60.065 52.381 0.00 0.00 36.61 4.37
293 294 1.386533 GGTGATGAGCATTCAGTGGG 58.613 55.000 0.00 0.00 36.61 4.61
294 295 1.012086 CGGTGATGAGCATTCAGTGG 58.988 55.000 0.00 0.00 36.61 4.00
295 296 2.014335 TCGGTGATGAGCATTCAGTG 57.986 50.000 0.00 0.00 36.61 3.66
296 297 2.768253 TTCGGTGATGAGCATTCAGT 57.232 45.000 0.00 0.00 36.61 3.41
297 298 4.497006 GGAATTTCGGTGATGAGCATTCAG 60.497 45.833 0.00 0.00 36.61 3.02
298 299 3.378112 GGAATTTCGGTGATGAGCATTCA 59.622 43.478 0.00 0.00 37.81 2.57
299 300 3.629398 AGGAATTTCGGTGATGAGCATTC 59.371 43.478 0.00 0.00 0.00 2.67
300 301 3.379372 CAGGAATTTCGGTGATGAGCATT 59.621 43.478 0.00 0.00 0.00 3.56
301 302 2.947652 CAGGAATTTCGGTGATGAGCAT 59.052 45.455 0.00 0.00 0.00 3.79
302 303 2.027285 TCAGGAATTTCGGTGATGAGCA 60.027 45.455 0.00 0.00 0.00 4.26
303 304 2.632377 TCAGGAATTTCGGTGATGAGC 58.368 47.619 0.00 0.00 0.00 4.26
304 305 5.824904 ATTTCAGGAATTTCGGTGATGAG 57.175 39.130 2.04 0.00 0.00 2.90
305 306 7.013274 GGATTATTTCAGGAATTTCGGTGATGA 59.987 37.037 2.04 0.00 0.00 2.92
306 307 7.141363 GGATTATTTCAGGAATTTCGGTGATG 58.859 38.462 2.04 0.00 0.00 3.07
307 308 6.833416 TGGATTATTTCAGGAATTTCGGTGAT 59.167 34.615 2.04 0.00 0.00 3.06
308 309 6.184068 TGGATTATTTCAGGAATTTCGGTGA 58.816 36.000 0.00 0.00 0.00 4.02
309 310 6.449635 TGGATTATTTCAGGAATTTCGGTG 57.550 37.500 0.00 0.00 0.00 4.94
310 311 6.699575 CTGGATTATTTCAGGAATTTCGGT 57.300 37.500 0.00 0.00 0.00 4.69
320 321 7.874940 TCGCATTTATTCCTGGATTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
321 322 7.522073 GCTCGCATTTATTCCTGGATTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
322 323 6.803807 GCTCGCATTTATTCCTGGATTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
323 324 6.265196 TGCTCGCATTTATTCCTGGATTATTT 59.735 34.615 0.00 0.00 0.00 1.40
324 325 5.769662 TGCTCGCATTTATTCCTGGATTATT 59.230 36.000 0.00 0.00 0.00 1.40
325 326 5.182001 GTGCTCGCATTTATTCCTGGATTAT 59.818 40.000 0.00 0.00 0.00 1.28
326 327 4.515191 GTGCTCGCATTTATTCCTGGATTA 59.485 41.667 0.00 0.00 0.00 1.75
327 328 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
328 329 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
329 330 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
330 331 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
331 332 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
332 333 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
333 334 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
334 335 2.032178 GTCCTGGTGCTCGCATTTATTC 59.968 50.000 0.00 0.00 0.00 1.75
335 336 2.017049 GTCCTGGTGCTCGCATTTATT 58.983 47.619 0.00 0.00 0.00 1.40
336 337 1.210478 AGTCCTGGTGCTCGCATTTAT 59.790 47.619 0.00 0.00 0.00 1.40
337 338 0.613260 AGTCCTGGTGCTCGCATTTA 59.387 50.000 0.00 0.00 0.00 1.40
338 339 0.250901 AAGTCCTGGTGCTCGCATTT 60.251 50.000 0.00 0.00 0.00 2.32
339 340 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
340 341 1.376424 CAAGTCCTGGTGCTCGCAT 60.376 57.895 0.00 0.00 0.00 4.73
341 342 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
342 343 1.301716 TTCAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
343 344 0.951040 GGTTCAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
344 345 0.606673 GGGTTCAAGTCCTGGTGCTC 60.607 60.000 0.00 0.00 0.00 4.26
345 346 1.062488 AGGGTTCAAGTCCTGGTGCT 61.062 55.000 0.00 0.00 31.11 4.40
346 347 0.890996 CAGGGTTCAAGTCCTGGTGC 60.891 60.000 0.00 0.00 44.99 5.01
347 348 3.329300 CAGGGTTCAAGTCCTGGTG 57.671 57.895 0.00 0.00 44.99 4.17
351 352 0.401395 TCCACCAGGGTTCAAGTCCT 60.401 55.000 0.00 0.00 38.11 3.85
352 353 0.250770 GTCCACCAGGGTTCAAGTCC 60.251 60.000 0.00 0.00 38.11 3.85
353 354 0.472471 TGTCCACCAGGGTTCAAGTC 59.528 55.000 0.00 0.00 38.11 3.01
354 355 0.474184 CTGTCCACCAGGGTTCAAGT 59.526 55.000 0.00 0.00 37.54 3.16
355 356 3.329300 CTGTCCACCAGGGTTCAAG 57.671 57.895 0.00 0.00 37.54 3.02
363 364 0.620410 TGGTATCCCCTGTCCACCAG 60.620 60.000 0.00 0.00 41.15 4.00
364 365 0.912487 GTGGTATCCCCTGTCCACCA 60.912 60.000 0.00 0.00 42.90 4.17
365 366 0.912487 TGTGGTATCCCCTGTCCACC 60.912 60.000 10.08 0.00 46.59 4.61
367 368 0.118346 ACTGTGGTATCCCCTGTCCA 59.882 55.000 0.00 0.00 0.00 4.02
368 369 0.831307 GACTGTGGTATCCCCTGTCC 59.169 60.000 0.00 0.00 30.57 4.02
369 370 0.831307 GGACTGTGGTATCCCCTGTC 59.169 60.000 0.00 1.24 33.29 3.51
370 371 3.007581 GGACTGTGGTATCCCCTGT 57.992 57.895 0.00 0.00 0.00 4.00
375 376 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
376 377 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
377 378 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
378 379 3.484953 ATGGTTAGAGGGACTGTGGTA 57.515 47.619 0.00 0.00 41.55 3.25
379 380 2.344093 ATGGTTAGAGGGACTGTGGT 57.656 50.000 0.00 0.00 41.55 4.16
380 381 3.721087 AAATGGTTAGAGGGACTGTGG 57.279 47.619 0.00 0.00 41.55 4.17
381 382 4.636206 GCTTAAATGGTTAGAGGGACTGTG 59.364 45.833 0.00 0.00 41.55 3.66
382 383 4.288626 TGCTTAAATGGTTAGAGGGACTGT 59.711 41.667 0.00 0.00 41.55 3.55
383 384 4.636206 GTGCTTAAATGGTTAGAGGGACTG 59.364 45.833 0.00 0.00 41.55 3.51
385 386 4.585879 TGTGCTTAAATGGTTAGAGGGAC 58.414 43.478 0.00 0.00 0.00 4.46
386 387 4.324254 CCTGTGCTTAAATGGTTAGAGGGA 60.324 45.833 0.00 0.00 0.00 4.20
387 388 3.947834 CCTGTGCTTAAATGGTTAGAGGG 59.052 47.826 0.00 0.00 0.00 4.30
388 389 4.589908 ACCTGTGCTTAAATGGTTAGAGG 58.410 43.478 0.00 0.00 0.00 3.69
389 390 5.106157 CCAACCTGTGCTTAAATGGTTAGAG 60.106 44.000 0.00 0.00 38.76 2.43
390 391 4.764823 CCAACCTGTGCTTAAATGGTTAGA 59.235 41.667 0.00 0.00 38.76 2.10
391 392 4.522789 ACCAACCTGTGCTTAAATGGTTAG 59.477 41.667 0.00 0.00 38.76 2.34
392 393 4.475345 ACCAACCTGTGCTTAAATGGTTA 58.525 39.130 0.00 0.00 38.76 2.85
393 394 3.304829 ACCAACCTGTGCTTAAATGGTT 58.695 40.909 0.00 0.00 41.12 3.67
394 395 2.957474 ACCAACCTGTGCTTAAATGGT 58.043 42.857 0.00 0.00 34.98 3.55
395 396 3.611530 CGAACCAACCTGTGCTTAAATGG 60.612 47.826 0.00 0.00 0.00 3.16
396 397 3.564511 CGAACCAACCTGTGCTTAAATG 58.435 45.455 0.00 0.00 0.00 2.32
397 398 2.030274 GCGAACCAACCTGTGCTTAAAT 60.030 45.455 0.00 0.00 0.00 1.40
398 399 1.335496 GCGAACCAACCTGTGCTTAAA 59.665 47.619 0.00 0.00 0.00 1.52
399 400 0.948678 GCGAACCAACCTGTGCTTAA 59.051 50.000 0.00 0.00 0.00 1.85
400 401 0.179043 TGCGAACCAACCTGTGCTTA 60.179 50.000 0.00 0.00 0.00 3.09
401 402 1.453015 TGCGAACCAACCTGTGCTT 60.453 52.632 0.00 0.00 0.00 3.91
402 403 2.186826 GTGCGAACCAACCTGTGCT 61.187 57.895 0.00 0.00 0.00 4.40
403 404 2.331451 GTGCGAACCAACCTGTGC 59.669 61.111 0.00 0.00 0.00 4.57
404 405 1.648720 CTGTGCGAACCAACCTGTG 59.351 57.895 0.00 0.00 0.00 3.66
405 406 1.525995 CCTGTGCGAACCAACCTGT 60.526 57.895 0.00 0.00 0.00 4.00
406 407 1.525995 ACCTGTGCGAACCAACCTG 60.526 57.895 0.00 0.00 0.00 4.00
407 408 1.525995 CACCTGTGCGAACCAACCT 60.526 57.895 0.00 0.00 0.00 3.50
408 409 2.551912 CCACCTGTGCGAACCAACC 61.552 63.158 0.00 0.00 0.00 3.77
409 410 1.525077 TCCACCTGTGCGAACCAAC 60.525 57.895 0.00 0.00 0.00 3.77
410 411 1.525077 GTCCACCTGTGCGAACCAA 60.525 57.895 0.00 0.00 0.00 3.67
411 412 2.110213 GTCCACCTGTGCGAACCA 59.890 61.111 0.00 0.00 0.00 3.67
412 413 1.961277 CTGTCCACCTGTGCGAACC 60.961 63.158 0.00 0.00 0.00 3.62
413 414 1.961277 CCTGTCCACCTGTGCGAAC 60.961 63.158 0.00 0.00 0.00 3.95
414 415 2.425592 CCTGTCCACCTGTGCGAA 59.574 61.111 0.00 0.00 0.00 4.70
415 416 3.625897 CCCTGTCCACCTGTGCGA 61.626 66.667 0.00 0.00 0.00 5.10
416 417 4.704833 CCCCTGTCCACCTGTGCG 62.705 72.222 0.00 0.00 0.00 5.34
417 418 1.271840 TATCCCCTGTCCACCTGTGC 61.272 60.000 0.00 0.00 0.00 4.57
418 419 1.417890 GATATCCCCTGTCCACCTGTG 59.582 57.143 0.00 0.00 0.00 3.66
419 420 1.009552 TGATATCCCCTGTCCACCTGT 59.990 52.381 0.00 0.00 0.00 4.00
420 421 1.417890 GTGATATCCCCTGTCCACCTG 59.582 57.143 0.00 0.00 0.00 4.00
421 422 1.009552 TGTGATATCCCCTGTCCACCT 59.990 52.381 0.00 0.00 0.00 4.00
422 423 1.417890 CTGTGATATCCCCTGTCCACC 59.582 57.143 0.00 0.00 0.00 4.61
423 424 2.119495 ACTGTGATATCCCCTGTCCAC 58.881 52.381 0.00 0.00 0.00 4.02
424 425 2.118679 CACTGTGATATCCCCTGTCCA 58.881 52.381 0.32 0.00 0.00 4.02
425 426 2.119495 ACACTGTGATATCCCCTGTCC 58.881 52.381 15.86 0.00 0.00 4.02
426 427 3.914426 AACACTGTGATATCCCCTGTC 57.086 47.619 15.86 0.00 0.00 3.51
427 428 3.330701 ACAAACACTGTGATATCCCCTGT 59.669 43.478 15.86 0.00 36.69 4.00
428 429 3.955471 ACAAACACTGTGATATCCCCTG 58.045 45.455 15.86 0.00 36.69 4.45
429 430 5.772393 TTACAAACACTGTGATATCCCCT 57.228 39.130 15.86 0.00 39.20 4.79
430 431 5.236478 CGATTACAAACACTGTGATATCCCC 59.764 44.000 15.86 0.00 39.20 4.81
431 432 5.815740 ACGATTACAAACACTGTGATATCCC 59.184 40.000 15.86 0.00 39.20 3.85
432 433 6.291637 CGACGATTACAAACACTGTGATATCC 60.292 42.308 15.86 0.00 39.20 2.59
433 434 6.628187 CGACGATTACAAACACTGTGATATC 58.372 40.000 15.86 1.91 39.20 1.63
434 435 5.005394 GCGACGATTACAAACACTGTGATAT 59.995 40.000 15.86 0.00 39.20 1.63
435 436 4.325204 GCGACGATTACAAACACTGTGATA 59.675 41.667 15.86 0.00 39.20 2.15
436 437 3.122948 GCGACGATTACAAACACTGTGAT 59.877 43.478 15.86 0.00 39.20 3.06
437 438 2.473609 GCGACGATTACAAACACTGTGA 59.526 45.455 15.86 0.00 39.20 3.58
438 439 2.475111 AGCGACGATTACAAACACTGTG 59.525 45.455 6.19 6.19 39.20 3.66
439 440 2.750948 AGCGACGATTACAAACACTGT 58.249 42.857 0.00 0.00 42.47 3.55
440 441 3.303495 CCTAGCGACGATTACAAACACTG 59.697 47.826 0.00 0.00 0.00 3.66
441 442 3.057033 ACCTAGCGACGATTACAAACACT 60.057 43.478 0.00 0.00 0.00 3.55
442 443 3.060363 CACCTAGCGACGATTACAAACAC 59.940 47.826 0.00 0.00 0.00 3.32
443 444 3.247442 CACCTAGCGACGATTACAAACA 58.753 45.455 0.00 0.00 0.00 2.83
444 445 2.601763 CCACCTAGCGACGATTACAAAC 59.398 50.000 0.00 0.00 0.00 2.93
445 446 2.231964 ACCACCTAGCGACGATTACAAA 59.768 45.455 0.00 0.00 0.00 2.83
446 447 1.820519 ACCACCTAGCGACGATTACAA 59.179 47.619 0.00 0.00 0.00 2.41
447 448 1.466856 ACCACCTAGCGACGATTACA 58.533 50.000 0.00 0.00 0.00 2.41
448 449 2.159338 TGAACCACCTAGCGACGATTAC 60.159 50.000 0.00 0.00 0.00 1.89
449 450 2.093890 TGAACCACCTAGCGACGATTA 58.906 47.619 0.00 0.00 0.00 1.75
450 451 0.892755 TGAACCACCTAGCGACGATT 59.107 50.000 0.00 0.00 0.00 3.34
451 452 1.112113 ATGAACCACCTAGCGACGAT 58.888 50.000 0.00 0.00 0.00 3.73
452 453 1.674441 CTATGAACCACCTAGCGACGA 59.326 52.381 0.00 0.00 0.00 4.20
453 454 1.674441 TCTATGAACCACCTAGCGACG 59.326 52.381 0.00 0.00 0.00 5.12
454 455 2.223758 GGTCTATGAACCACCTAGCGAC 60.224 54.545 0.00 0.00 39.27 5.19
455 456 2.029623 GGTCTATGAACCACCTAGCGA 58.970 52.381 0.00 0.00 39.27 4.93
456 457 2.032620 AGGTCTATGAACCACCTAGCG 58.967 52.381 1.67 0.00 42.12 4.26
457 458 2.103263 CCAGGTCTATGAACCACCTAGC 59.897 54.545 1.67 0.00 42.12 3.42
458 459 3.375699 ACCAGGTCTATGAACCACCTAG 58.624 50.000 0.00 0.00 42.12 3.02
459 460 3.484953 ACCAGGTCTATGAACCACCTA 57.515 47.619 0.00 0.00 42.12 3.08
460 461 2.305927 CAACCAGGTCTATGAACCACCT 59.694 50.000 0.00 0.00 42.12 4.00
461 462 2.039879 ACAACCAGGTCTATGAACCACC 59.960 50.000 0.00 0.00 42.12 4.61
462 463 3.418684 ACAACCAGGTCTATGAACCAC 57.581 47.619 0.00 0.00 42.12 4.16
463 464 5.772393 ATTACAACCAGGTCTATGAACCA 57.228 39.130 0.00 0.00 42.12 3.67
464 465 7.462571 AAAATTACAACCAGGTCTATGAACC 57.537 36.000 0.00 0.00 39.80 3.62
465 466 8.357402 ACAAAAATTACAACCAGGTCTATGAAC 58.643 33.333 0.00 0.00 0.00 3.18
466 467 8.472007 ACAAAAATTACAACCAGGTCTATGAA 57.528 30.769 0.00 0.00 0.00 2.57
467 468 8.472007 AACAAAAATTACAACCAGGTCTATGA 57.528 30.769 0.00 0.00 0.00 2.15
468 469 9.620660 GTAACAAAAATTACAACCAGGTCTATG 57.379 33.333 0.00 0.00 35.50 2.23
469 470 8.799367 GGTAACAAAAATTACAACCAGGTCTAT 58.201 33.333 0.00 0.00 36.87 1.98
470 471 8.000127 AGGTAACAAAAATTACAACCAGGTCTA 59.000 33.333 0.00 0.00 36.87 2.59
471 472 6.837048 AGGTAACAAAAATTACAACCAGGTCT 59.163 34.615 0.00 0.00 36.87 3.85
472 473 7.046292 AGGTAACAAAAATTACAACCAGGTC 57.954 36.000 0.00 0.00 36.87 3.85
473 474 7.426606 AAGGTAACAAAAATTACAACCAGGT 57.573 32.000 0.00 0.00 36.87 4.00
474 475 8.608317 CAAAAGGTAACAAAAATTACAACCAGG 58.392 33.333 0.00 0.00 36.87 4.45
475 476 9.157104 ACAAAAGGTAACAAAAATTACAACCAG 57.843 29.630 0.00 0.00 36.87 4.00
476 477 8.936864 CACAAAAGGTAACAAAAATTACAACCA 58.063 29.630 0.00 0.00 36.87 3.67
477 478 8.937884 ACACAAAAGGTAACAAAAATTACAACC 58.062 29.630 0.00 0.00 36.87 3.77
480 481 9.930693 AGAACACAAAAGGTAACAAAAATTACA 57.069 25.926 0.00 0.00 36.87 2.41
483 484 9.150348 CAGAGAACACAAAAGGTAACAAAAATT 57.850 29.630 0.00 0.00 41.41 1.82
484 485 8.311109 ACAGAGAACACAAAAGGTAACAAAAAT 58.689 29.630 0.00 0.00 41.41 1.82
485 486 7.662897 ACAGAGAACACAAAAGGTAACAAAAA 58.337 30.769 0.00 0.00 41.41 1.94
486 487 7.222000 ACAGAGAACACAAAAGGTAACAAAA 57.778 32.000 0.00 0.00 41.41 2.44
487 488 6.827586 ACAGAGAACACAAAAGGTAACAAA 57.172 33.333 0.00 0.00 41.41 2.83
488 489 7.065324 CAGTACAGAGAACACAAAAGGTAACAA 59.935 37.037 0.00 0.00 41.41 2.83
489 490 6.537301 CAGTACAGAGAACACAAAAGGTAACA 59.463 38.462 0.00 0.00 41.41 2.41
490 491 6.511282 GCAGTACAGAGAACACAAAAGGTAAC 60.511 42.308 0.00 0.00 0.00 2.50
491 492 5.526111 GCAGTACAGAGAACACAAAAGGTAA 59.474 40.000 0.00 0.00 0.00 2.85
492 493 5.054477 GCAGTACAGAGAACACAAAAGGTA 58.946 41.667 0.00 0.00 0.00 3.08
493 494 3.877508 GCAGTACAGAGAACACAAAAGGT 59.122 43.478 0.00 0.00 0.00 3.50
494 495 3.251004 GGCAGTACAGAGAACACAAAAGG 59.749 47.826 0.00 0.00 0.00 3.11
495 496 3.876914 TGGCAGTACAGAGAACACAAAAG 59.123 43.478 0.00 0.00 0.00 2.27
496 497 3.879998 TGGCAGTACAGAGAACACAAAA 58.120 40.909 0.00 0.00 0.00 2.44
497 498 3.552132 TGGCAGTACAGAGAACACAAA 57.448 42.857 0.00 0.00 0.00 2.83
498 499 3.070878 TCATGGCAGTACAGAGAACACAA 59.929 43.478 0.00 0.00 0.00 3.33
499 500 2.632512 TCATGGCAGTACAGAGAACACA 59.367 45.455 0.00 0.00 0.00 3.72
500 501 3.319137 TCATGGCAGTACAGAGAACAC 57.681 47.619 0.00 0.00 0.00 3.32
501 502 4.558226 AATCATGGCAGTACAGAGAACA 57.442 40.909 0.00 0.00 0.00 3.18
502 503 6.763135 TCATTAATCATGGCAGTACAGAGAAC 59.237 38.462 0.00 0.00 33.07 3.01
503 504 6.888105 TCATTAATCATGGCAGTACAGAGAA 58.112 36.000 0.00 0.00 33.07 2.87
504 505 6.484364 TCATTAATCATGGCAGTACAGAGA 57.516 37.500 0.00 0.00 33.07 3.10
505 506 7.741027 ATTCATTAATCATGGCAGTACAGAG 57.259 36.000 0.00 0.00 33.07 3.35
506 507 8.650490 TCTATTCATTAATCATGGCAGTACAGA 58.350 33.333 0.00 0.00 33.07 3.41
507 508 8.837788 TCTATTCATTAATCATGGCAGTACAG 57.162 34.615 0.00 0.00 33.07 2.74
508 509 9.797642 AATCTATTCATTAATCATGGCAGTACA 57.202 29.630 0.00 0.00 33.07 2.90
511 512 8.929260 TCAATCTATTCATTAATCATGGCAGT 57.071 30.769 0.00 0.00 33.07 4.40
549 550 7.768120 TGTTTTGTTGTTCCATGCTCTATTTTT 59.232 29.630 0.00 0.00 0.00 1.94
550 551 7.271511 TGTTTTGTTGTTCCATGCTCTATTTT 58.728 30.769 0.00 0.00 0.00 1.82
551 552 6.815089 TGTTTTGTTGTTCCATGCTCTATTT 58.185 32.000 0.00 0.00 0.00 1.40
552 553 6.403866 TGTTTTGTTGTTCCATGCTCTATT 57.596 33.333 0.00 0.00 0.00 1.73
553 554 6.040842 ACTTGTTTTGTTGTTCCATGCTCTAT 59.959 34.615 0.00 0.00 0.00 1.98
554 555 5.359576 ACTTGTTTTGTTGTTCCATGCTCTA 59.640 36.000 0.00 0.00 0.00 2.43
555 556 4.160252 ACTTGTTTTGTTGTTCCATGCTCT 59.840 37.500 0.00 0.00 0.00 4.09
556 557 4.432712 ACTTGTTTTGTTGTTCCATGCTC 58.567 39.130 0.00 0.00 0.00 4.26
557 558 4.470334 ACTTGTTTTGTTGTTCCATGCT 57.530 36.364 0.00 0.00 0.00 3.79
558 559 5.587289 TCTACTTGTTTTGTTGTTCCATGC 58.413 37.500 0.00 0.00 0.00 4.06
559 560 5.687285 GCTCTACTTGTTTTGTTGTTCCATG 59.313 40.000 0.00 0.00 0.00 3.66
560 561 5.359576 TGCTCTACTTGTTTTGTTGTTCCAT 59.640 36.000 0.00 0.00 0.00 3.41
561 562 4.702612 TGCTCTACTTGTTTTGTTGTTCCA 59.297 37.500 0.00 0.00 0.00 3.53
562 563 5.243426 TGCTCTACTTGTTTTGTTGTTCC 57.757 39.130 0.00 0.00 0.00 3.62
563 564 6.197096 CACATGCTCTACTTGTTTTGTTGTTC 59.803 38.462 0.00 0.00 34.59 3.18
564 565 6.035843 CACATGCTCTACTTGTTTTGTTGTT 58.964 36.000 0.00 0.00 34.59 2.83
565 566 5.125417 ACACATGCTCTACTTGTTTTGTTGT 59.875 36.000 0.00 0.00 34.59 3.32
566 567 5.581605 ACACATGCTCTACTTGTTTTGTTG 58.418 37.500 0.00 0.00 34.59 3.33
567 568 5.835113 ACACATGCTCTACTTGTTTTGTT 57.165 34.783 0.00 0.00 34.59 2.83
568 569 5.125417 ACAACACATGCTCTACTTGTTTTGT 59.875 36.000 9.21 9.21 45.29 2.83
569 570 5.581605 ACAACACATGCTCTACTTGTTTTG 58.418 37.500 0.00 8.27 44.00 2.44
570 571 5.835113 ACAACACATGCTCTACTTGTTTT 57.165 34.783 0.00 0.00 34.59 2.43
571 572 5.221048 GGAACAACACATGCTCTACTTGTTT 60.221 40.000 0.00 0.00 34.59 2.83
572 573 4.275936 GGAACAACACATGCTCTACTTGTT 59.724 41.667 0.00 0.00 34.59 2.83
573 574 3.815401 GGAACAACACATGCTCTACTTGT 59.185 43.478 0.00 0.00 37.13 3.16
574 575 3.814842 TGGAACAACACATGCTCTACTTG 59.185 43.478 0.00 0.00 31.92 3.16
575 576 3.815401 GTGGAACAACACATGCTCTACTT 59.185 43.478 0.00 0.00 44.16 2.24
576 577 3.403038 GTGGAACAACACATGCTCTACT 58.597 45.455 0.00 0.00 44.16 2.57
577 578 2.157668 CGTGGAACAACACATGCTCTAC 59.842 50.000 0.00 0.00 44.16 2.59
578 579 2.224185 ACGTGGAACAACACATGCTCTA 60.224 45.455 0.00 0.00 44.16 2.43
579 580 1.229428 CGTGGAACAACACATGCTCT 58.771 50.000 0.00 0.00 44.16 4.09
580 581 0.944386 ACGTGGAACAACACATGCTC 59.056 50.000 0.00 0.00 44.16 4.26
581 582 2.248280 TACGTGGAACAACACATGCT 57.752 45.000 0.00 0.00 44.16 3.79
582 583 2.473868 CGATACGTGGAACAACACATGC 60.474 50.000 0.00 0.00 44.16 4.06
583 584 2.473868 GCGATACGTGGAACAACACATG 60.474 50.000 0.00 0.00 44.16 3.21
589 590 1.364721 CATGGCGATACGTGGAACAA 58.635 50.000 0.00 0.00 44.16 2.83
624 625 0.169451 GGCGAAAACGTACCCCATTG 59.831 55.000 0.00 0.00 0.00 2.82
628 629 3.120385 CCGGCGAAAACGTACCCC 61.120 66.667 9.30 0.00 0.00 4.95
634 635 1.204813 GTAACCACCGGCGAAAACG 59.795 57.895 9.30 0.00 0.00 3.60
728 730 9.610215 AAATACTGTATTTGCTCCAAGGGTGGA 62.610 40.741 21.51 0.00 42.87 4.02
729 731 7.532206 AAATACTGTATTTGCTCCAAGGGTGG 61.532 42.308 21.51 0.00 40.36 4.61
730 732 2.795329 ACTGTATTTGCTCCAAGGGTG 58.205 47.619 0.00 0.00 0.00 4.61
731 733 4.862641 ATACTGTATTTGCTCCAAGGGT 57.137 40.909 0.00 0.00 0.00 4.34
773 778 1.626654 CGGCCGTGTGACTGTGAATC 61.627 60.000 19.50 0.00 0.00 2.52
828 833 4.054671 AGAAAGAGAAGAGTTGTGCTTCG 58.945 43.478 0.00 0.00 44.88 3.79
830 835 4.102367 AGGAGAAAGAGAAGAGTTGTGCTT 59.898 41.667 0.00 0.00 0.00 3.91
846 851 7.126726 TCGGGAATAATAAAAGGAGAGGAGAAA 59.873 37.037 0.00 0.00 0.00 2.52
902 907 1.066286 CAAGGAGAAGAGCTGTGGAGG 60.066 57.143 0.00 0.00 0.00 4.30
922 935 0.947244 CCAAGCTGTGTTGTGGAGAC 59.053 55.000 0.00 0.00 32.54 3.36
929 942 1.572085 CGGAGAGCCAAGCTGTGTTG 61.572 60.000 0.00 0.00 39.88 3.33
1061 1074 3.323751 AACAAATCAATTGGGCAGAGC 57.676 42.857 5.42 0.00 43.66 4.09
1264 1279 4.673298 ATCAACCACGCGGACGCA 62.673 61.111 17.35 0.00 45.53 5.24
1268 1283 4.444838 CGGGATCAACCACGCGGA 62.445 66.667 12.47 0.00 41.20 5.54
1492 1507 1.551019 GGCTACCCAGTTCGTCCCTT 61.551 60.000 0.00 0.00 0.00 3.95
1756 1777 1.747355 CAGATCAACACTGGAATGGGC 59.253 52.381 0.00 0.00 0.00 5.36
1779 1800 6.207417 ACAGAAATATCACAAGACTGGTTTGG 59.793 38.462 0.00 0.00 0.00 3.28
1897 1918 9.599322 CAATGATTCAAGAACACAAGTACTAAC 57.401 33.333 0.00 0.00 0.00 2.34
1928 1949 4.479158 ACCATCCACACCAAACTACAAAT 58.521 39.130 0.00 0.00 0.00 2.32
2050 2071 7.123355 AGAAATTCAGGGTGTGATTTTGAAA 57.877 32.000 0.00 0.00 38.35 2.69
2122 2143 2.216046 CCATCCACATGATCTGAACCG 58.784 52.381 0.00 0.00 30.57 4.44
2142 2163 4.937431 GGGCGCCATCCCAGTAGC 62.937 72.222 30.85 1.84 45.82 3.58
2177 2198 2.359850 GGCGGCATGAGTTGGTGA 60.360 61.111 3.07 0.00 0.00 4.02
2232 2253 2.894387 CTGGCTAAGGCTCTGCGC 60.894 66.667 0.00 0.00 38.73 6.09
2259 2280 3.936453 TGATGGTTCATAAACGGTGCTAC 59.064 43.478 0.00 0.00 36.16 3.58
2386 2419 0.662619 TGCTGCTGTTAGTGTGTTGC 59.337 50.000 0.00 0.00 0.00 4.17
2388 2421 3.070018 GAGATGCTGCTGTTAGTGTGTT 58.930 45.455 0.00 0.00 0.00 3.32
2416 2449 4.767928 AGGAGGAGACTAACTGTGTTGTAG 59.232 45.833 0.00 0.00 44.43 2.74
2486 2519 2.648059 GGAAACATATCAGGCAGCTGT 58.352 47.619 16.64 0.00 0.00 4.40
2495 2528 6.438186 TGAGATGCATAGGGAAACATATCA 57.562 37.500 0.00 0.00 38.15 2.15
2729 2764 7.479352 ACTGGGAGATTCATCTACTGATATG 57.521 40.000 0.00 0.00 37.89 1.78
2895 3072 0.461135 TTCGGTAGGTTCCATACGCC 59.539 55.000 0.00 0.00 0.00 5.68
3128 3305 1.273327 CCTTGTTGCATTCCTTGTCCC 59.727 52.381 0.00 0.00 0.00 4.46
3192 3369 7.419981 GGGATAATATCAAGGATCTCATCTGGG 60.420 44.444 2.41 0.00 0.00 4.45
3488 3665 6.663944 ATCTACTGAAACTAATTTGGCGTC 57.336 37.500 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.