Multiple sequence alignment - TraesCS2A01G249100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G249100 chr2A 100.000 4753 0 0 1 4753 373867126 373871878 0.000000e+00 8778.0
1 TraesCS2A01G249100 chr2A 95.971 273 10 1 2109 2380 373869097 373869369 4.370000e-120 442.0
2 TraesCS2A01G249100 chr2A 95.971 273 10 1 1972 2244 373869234 373869505 4.370000e-120 442.0
3 TraesCS2A01G249100 chr2A 94.309 246 10 2 112 353 735747302 735747547 1.620000e-99 374.0
4 TraesCS2A01G249100 chr2A 94.891 137 6 1 2245 2380 373869097 373869233 3.730000e-51 213.0
5 TraesCS2A01G249100 chr2A 94.891 137 6 1 1972 2108 373869370 373869505 3.730000e-51 213.0
6 TraesCS2A01G249100 chr2A 100.000 49 0 0 1829 1877 240483105 240483153 1.820000e-14 91.6
7 TraesCS2A01G249100 chr2D 94.005 3353 89 20 695 4000 299523878 299527165 0.000000e+00 4975.0
8 TraesCS2A01G249100 chr2D 96.703 273 8 1 1972 2244 299525265 299525536 2.020000e-123 453.0
9 TraesCS2A01G249100 chr2D 94.502 291 16 0 355 645 550636942 550637232 2.610000e-122 449.0
10 TraesCS2A01G249100 chr2D 95.510 245 8 1 113 354 267844111 267843867 5.770000e-104 388.0
11 TraesCS2A01G249100 chr2D 92.279 272 9 1 2109 2380 299525141 299525400 4.490000e-100 375.0
12 TraesCS2A01G249100 chr2D 97.080 137 3 1 1972 2108 299525401 299525536 3.700000e-56 230.0
13 TraesCS2A01G249100 chr2D 90.260 154 10 2 4001 4149 299527243 299527396 3.750000e-46 196.0
14 TraesCS2A01G249100 chr2D 94.167 120 5 2 1 119 299523240 299523358 1.050000e-41 182.0
15 TraesCS2A01G249100 chr2D 86.029 136 7 1 2245 2380 299525141 299525264 8.300000e-28 135.0
16 TraesCS2A01G249100 chr2D 100.000 49 0 0 1829 1877 220977068 220977116 1.820000e-14 91.6
17 TraesCS2A01G249100 chr2D 90.000 60 6 0 1831 1890 169042552 169042493 1.420000e-10 78.7
18 TraesCS2A01G249100 chr2D 90.476 42 4 0 3114 3155 495400210 495400169 6.640000e-04 56.5
19 TraesCS2A01G249100 chr2B 94.517 1532 45 20 803 2308 358675836 358674318 0.000000e+00 2327.0
20 TraesCS2A01G249100 chr2B 94.396 1499 50 13 2514 3999 358673987 358672510 0.000000e+00 2272.0
21 TraesCS2A01G249100 chr2B 94.485 272 15 0 2109 2380 358674653 358674382 2.050000e-113 420.0
22 TraesCS2A01G249100 chr2B 96.020 201 7 1 1972 2172 358674517 358674318 4.590000e-85 326.0
23 TraesCS2A01G249100 chr2B 87.879 264 28 4 4424 4687 358669428 358669169 1.660000e-79 307.0
24 TraesCS2A01G249100 chr2B 95.429 175 8 0 2303 2477 358674145 358673971 3.620000e-71 279.0
25 TraesCS2A01G249100 chr2B 94.118 136 8 0 2245 2380 358674653 358674518 1.730000e-49 207.0
26 TraesCS2A01G249100 chr2B 95.833 120 3 2 1 119 358679527 358679409 4.850000e-45 193.0
27 TraesCS2A01G249100 chr2B 95.181 83 3 1 698 779 358678904 358678822 3.860000e-26 130.0
28 TraesCS2A01G249100 chr2B 96.875 64 2 0 1972 2035 358674381 358674318 1.810000e-19 108.0
29 TraesCS2A01G249100 chr2B 96.667 60 2 0 4152 4211 358670021 358669962 3.030000e-17 100.0
30 TraesCS2A01G249100 chr4D 94.845 291 15 0 355 645 509132639 509132929 5.610000e-124 455.0
31 TraesCS2A01G249100 chr4D 93.878 294 18 0 352 645 301526371 301526664 1.210000e-120 444.0
32 TraesCS2A01G249100 chr4D 84.848 66 8 2 4689 4753 37510267 37510331 1.100000e-06 65.8
33 TraesCS2A01G249100 chr5B 94.828 290 15 0 356 645 323369052 323368763 2.020000e-123 453.0
34 TraesCS2A01G249100 chr5B 90.385 52 3 2 3113 3163 553925293 553925343 3.070000e-07 67.6
35 TraesCS2A01G249100 chr7B 94.158 291 17 0 355 645 518193841 518193551 1.210000e-120 444.0
36 TraesCS2A01G249100 chr7B 93.878 294 17 1 356 648 132398666 132398959 4.370000e-120 442.0
37 TraesCS2A01G249100 chr7B 94.628 242 12 1 115 355 82551248 82551489 1.620000e-99 374.0
38 TraesCS2A01G249100 chr7B 92.308 65 5 0 4689 4753 217602578 217602642 5.060000e-15 93.5
39 TraesCS2A01G249100 chr3D 94.158 291 17 0 355 645 240482527 240482817 1.210000e-120 444.0
40 TraesCS2A01G249100 chr1B 93.857 293 18 0 353 645 177809481 177809189 4.370000e-120 442.0
41 TraesCS2A01G249100 chr6D 92.434 304 22 1 341 643 70009497 70009194 2.630000e-117 433.0
42 TraesCS2A01G249100 chr6D 92.969 256 12 5 118 368 316126369 316126115 7.510000e-98 368.0
43 TraesCS2A01G249100 chr1A 94.186 258 9 5 112 365 21989758 21990013 5.770000e-104 388.0
44 TraesCS2A01G249100 chr5A 95.417 240 8 2 118 354 154444409 154444170 3.470000e-101 379.0
45 TraesCS2A01G249100 chr5A 94.309 123 7 0 4305 4427 34968673 34968795 6.280000e-44 189.0
46 TraesCS2A01G249100 chr5A 92.742 124 8 1 4305 4427 692911781 692911904 1.360000e-40 178.0
47 TraesCS2A01G249100 chr5A 90.244 82 8 0 1235 1316 611547327 611547408 1.810000e-19 108.0
48 TraesCS2A01G249100 chr3A 95.417 240 8 2 118 354 32827393 32827154 3.470000e-101 379.0
49 TraesCS2A01G249100 chr3A 91.803 61 3 2 1817 1876 418753005 418753064 3.050000e-12 84.2
50 TraesCS2A01G249100 chr3A 93.103 58 1 2 1837 1891 55023925 55023868 1.100000e-11 82.4
51 TraesCS2A01G249100 chr4A 93.023 258 12 4 103 355 75430060 75429804 5.810000e-99 372.0
52 TraesCS2A01G249100 chr4A 87.692 65 8 0 4689 4753 604357891 604357827 5.100000e-10 76.8
53 TraesCS2A01G249100 chr7D 92.941 255 13 5 101 354 156448282 156448032 2.700000e-97 366.0
54 TraesCS2A01G249100 chr5D 76.573 286 45 15 4424 4689 26602477 26602760 2.310000e-28 137.0
55 TraesCS2A01G249100 chr4B 96.721 61 2 0 4693 4753 256711961 256712021 8.420000e-18 102.0
56 TraesCS2A01G249100 chr4B 92.308 65 4 1 4690 4753 299014047 299014111 1.820000e-14 91.6
57 TraesCS2A01G249100 chr6A 91.045 67 5 1 4686 4752 295586099 295586034 6.550000e-14 89.8
58 TraesCS2A01G249100 chr6A 96.296 54 1 1 1827 1879 604890758 604890705 2.360000e-13 87.9
59 TraesCS2A01G249100 chr3B 94.545 55 3 0 1826 1880 482487893 482487839 8.470000e-13 86.1
60 TraesCS2A01G249100 chr7A 91.379 58 5 0 4693 4750 62715298 62715355 3.940000e-11 80.5
61 TraesCS2A01G249100 chr7A 91.071 56 4 1 4698 4753 683715877 683715931 1.830000e-09 75.0
62 TraesCS2A01G249100 chr7A 89.130 46 5 0 3113 3158 92858330 92858375 1.850000e-04 58.4
63 TraesCS2A01G249100 chr7A 89.130 46 5 0 3113 3158 92863331 92863376 1.850000e-04 58.4
64 TraesCS2A01G249100 chr6B 100.000 29 0 0 4693 4721 712653105 712653133 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G249100 chr2A 373867126 373871878 4752 False 2017.600000 8778 96.344800 1 4753 5 chr2A.!!$F3 4752
1 TraesCS2A01G249100 chr2D 299523240 299527396 4156 False 935.142857 4975 92.931857 1 4149 7 chr2D.!!$F3 4148
2 TraesCS2A01G249100 chr2B 358669169 358675836 6667 True 705.111111 2327 94.487333 803 4687 9 chr2B.!!$R1 3884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 323 0.034337 AGTTAGCCTCGAAAACCGCA 59.966 50.000 0.0 0.0 38.37 5.69 F
552 553 0.037605 CACGAAGAGCCCGTTTACCT 60.038 55.000 0.0 0.0 38.29 3.08 F
1057 1537 0.106217 CTGTCTCCTCCTCCTCCTCC 60.106 65.000 0.0 0.0 0.00 4.30 F
1058 1538 1.231928 GTCTCCTCCTCCTCCTCCC 59.768 68.421 0.0 0.0 0.00 4.30 F
2703 3387 1.457303 GAGTAGTGTGCAGCAAGAACG 59.543 52.381 0.0 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1400 1888 1.757699 GAGCCCTAACTAGTGGACCAG 59.242 57.143 0.0 0.00 0.00 4.00 R
1925 2431 3.434637 GCGCATAAACTACAAATGGTGG 58.565 45.455 0.3 0.00 0.00 4.61 R
3006 3701 2.335316 ACGACTGGCCACTTACAAAA 57.665 45.000 0.0 0.00 0.00 2.44 R
3069 3764 3.801307 TTGGGGAGTTCCTAAAGGTTC 57.199 47.619 0.0 0.00 32.74 3.62 R
4391 7469 0.041833 TGCAGACTCTAGAGGGGCTT 59.958 55.000 23.5 1.86 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 7.816995 GGTTGGTTTCATAGCAATGACAATTAA 59.183 33.333 0.00 0.00 45.20 1.40
98 99 8.863049 GTTGGTTTCATAGCAATGACAATTAAG 58.137 33.333 0.00 0.00 45.20 1.85
99 100 8.347004 TGGTTTCATAGCAATGACAATTAAGA 57.653 30.769 0.00 0.00 41.87 2.10
122 123 9.708092 AAGACTTTGATTGTTAACTACTACTCC 57.292 33.333 7.22 0.00 0.00 3.85
123 124 8.312564 AGACTTTGATTGTTAACTACTACTCCC 58.687 37.037 7.22 0.00 0.00 4.30
124 125 8.203681 ACTTTGATTGTTAACTACTACTCCCT 57.796 34.615 7.22 0.00 0.00 4.20
125 126 8.312564 ACTTTGATTGTTAACTACTACTCCCTC 58.687 37.037 7.22 0.00 0.00 4.30
126 127 6.786967 TGATTGTTAACTACTACTCCCTCC 57.213 41.667 7.22 0.00 0.00 4.30
127 128 6.500336 TGATTGTTAACTACTACTCCCTCCT 58.500 40.000 7.22 0.00 0.00 3.69
128 129 7.645942 TGATTGTTAACTACTACTCCCTCCTA 58.354 38.462 7.22 0.00 0.00 2.94
129 130 8.287350 TGATTGTTAACTACTACTCCCTCCTAT 58.713 37.037 7.22 0.00 0.00 2.57
130 131 8.709272 ATTGTTAACTACTACTCCCTCCTATC 57.291 38.462 7.22 0.00 0.00 2.08
131 132 7.463054 TGTTAACTACTACTCCCTCCTATCT 57.537 40.000 7.22 0.00 0.00 1.98
132 133 8.572884 TGTTAACTACTACTCCCTCCTATCTA 57.427 38.462 7.22 0.00 0.00 1.98
133 134 9.180282 TGTTAACTACTACTCCCTCCTATCTAT 57.820 37.037 7.22 0.00 0.00 1.98
159 160 5.567430 AGGGACTAATGTGTTTTTAGGACC 58.433 41.667 0.00 0.00 36.02 4.46
160 161 4.393990 GGGACTAATGTGTTTTTAGGACCG 59.606 45.833 0.00 0.00 32.80 4.79
161 162 4.142752 GGACTAATGTGTTTTTAGGACCGC 60.143 45.833 0.00 0.00 32.15 5.68
162 163 3.754850 ACTAATGTGTTTTTAGGACCGCC 59.245 43.478 0.00 0.00 32.15 6.13
164 165 2.351706 TGTGTTTTTAGGACCGCCTT 57.648 45.000 0.00 0.00 43.90 4.35
165 166 2.657143 TGTGTTTTTAGGACCGCCTTT 58.343 42.857 0.00 0.00 43.90 3.11
166 167 2.359531 TGTGTTTTTAGGACCGCCTTTG 59.640 45.455 0.00 0.00 43.90 2.77
167 168 2.619646 GTGTTTTTAGGACCGCCTTTGA 59.380 45.455 0.00 0.00 43.90 2.69
168 169 2.619646 TGTTTTTAGGACCGCCTTTGAC 59.380 45.455 0.00 0.00 43.90 3.18
169 170 2.882761 GTTTTTAGGACCGCCTTTGACT 59.117 45.455 0.00 0.00 43.90 3.41
170 171 4.067192 GTTTTTAGGACCGCCTTTGACTA 58.933 43.478 0.00 0.00 43.90 2.59
171 172 4.563140 TTTTAGGACCGCCTTTGACTAT 57.437 40.909 0.00 0.00 43.90 2.12
172 173 4.563140 TTTAGGACCGCCTTTGACTATT 57.437 40.909 0.00 0.00 43.90 1.73
173 174 2.403252 AGGACCGCCTTTGACTATTG 57.597 50.000 0.00 0.00 43.90 1.90
174 175 1.906574 AGGACCGCCTTTGACTATTGA 59.093 47.619 0.00 0.00 43.90 2.57
175 176 2.007608 GGACCGCCTTTGACTATTGAC 58.992 52.381 0.00 0.00 0.00 3.18
176 177 2.614481 GGACCGCCTTTGACTATTGACA 60.614 50.000 0.00 0.00 0.00 3.58
177 178 3.071479 GACCGCCTTTGACTATTGACAA 58.929 45.455 0.00 0.00 0.00 3.18
178 179 3.074412 ACCGCCTTTGACTATTGACAAG 58.926 45.455 0.00 0.00 0.00 3.16
179 180 3.244422 ACCGCCTTTGACTATTGACAAGA 60.244 43.478 0.00 0.00 0.00 3.02
180 181 3.941483 CCGCCTTTGACTATTGACAAGAT 59.059 43.478 0.00 0.00 0.00 2.40
181 182 4.396166 CCGCCTTTGACTATTGACAAGATT 59.604 41.667 0.00 0.00 0.00 2.40
182 183 5.584649 CCGCCTTTGACTATTGACAAGATTA 59.415 40.000 0.00 0.00 0.00 1.75
183 184 6.093495 CCGCCTTTGACTATTGACAAGATTAA 59.907 38.462 0.00 0.00 0.00 1.40
184 185 7.201732 CCGCCTTTGACTATTGACAAGATTAAT 60.202 37.037 0.00 0.00 0.00 1.40
185 186 8.826710 CGCCTTTGACTATTGACAAGATTAATA 58.173 33.333 0.00 0.00 0.00 0.98
198 199 9.045223 TGACAAGATTAATAGTACATGACATGC 57.955 33.333 15.49 0.11 0.00 4.06
199 200 8.962884 ACAAGATTAATAGTACATGACATGCA 57.037 30.769 15.49 0.00 0.00 3.96
200 201 8.830580 ACAAGATTAATAGTACATGACATGCAC 58.169 33.333 15.49 12.79 0.00 4.57
201 202 8.829612 CAAGATTAATAGTACATGACATGCACA 58.170 33.333 18.79 7.29 0.00 4.57
202 203 8.962884 AGATTAATAGTACATGACATGCACAA 57.037 30.769 18.79 6.65 0.00 3.33
203 204 9.565090 AGATTAATAGTACATGACATGCACAAT 57.435 29.630 18.79 10.52 0.00 2.71
204 205 9.603298 GATTAATAGTACATGACATGCACAATG 57.397 33.333 18.79 0.00 42.48 2.82
240 241 2.670401 GAAAGCTCCTTTCACACACG 57.330 50.000 11.65 0.00 46.23 4.49
241 242 2.210116 GAAAGCTCCTTTCACACACGA 58.790 47.619 11.65 0.00 46.23 4.35
242 243 2.325583 AAGCTCCTTTCACACACGAA 57.674 45.000 0.00 0.00 0.00 3.85
243 244 2.550830 AGCTCCTTTCACACACGAAT 57.449 45.000 0.00 0.00 0.00 3.34
244 245 2.851195 AGCTCCTTTCACACACGAATT 58.149 42.857 0.00 0.00 0.00 2.17
245 246 3.214328 AGCTCCTTTCACACACGAATTT 58.786 40.909 0.00 0.00 0.00 1.82
246 247 4.385825 AGCTCCTTTCACACACGAATTTA 58.614 39.130 0.00 0.00 0.00 1.40
247 248 4.819630 AGCTCCTTTCACACACGAATTTAA 59.180 37.500 0.00 0.00 0.00 1.52
248 249 4.909880 GCTCCTTTCACACACGAATTTAAC 59.090 41.667 0.00 0.00 0.00 2.01
249 250 5.085636 TCCTTTCACACACGAATTTAACG 57.914 39.130 0.00 0.00 0.00 3.18
250 251 4.024725 TCCTTTCACACACGAATTTAACGG 60.025 41.667 0.00 0.00 34.93 4.44
251 252 4.260866 CCTTTCACACACGAATTTAACGGT 60.261 41.667 0.00 0.00 34.93 4.83
252 253 3.863396 TCACACACGAATTTAACGGTG 57.137 42.857 0.00 0.00 37.66 4.94
253 254 3.196463 TCACACACGAATTTAACGGTGT 58.804 40.909 0.00 0.00 41.61 4.16
254 255 3.284914 CACACACGAATTTAACGGTGTG 58.715 45.455 18.39 18.39 45.49 3.82
255 256 2.286536 ACACACGAATTTAACGGTGTGC 60.287 45.455 19.53 0.00 41.40 4.57
256 257 2.032377 CACACGAATTTAACGGTGTGCT 60.032 45.455 9.81 0.00 36.70 4.40
257 258 2.614983 ACACGAATTTAACGGTGTGCTT 59.385 40.909 0.00 0.00 34.93 3.91
258 259 3.065648 ACACGAATTTAACGGTGTGCTTT 59.934 39.130 0.00 0.00 34.93 3.51
259 260 3.420576 CACGAATTTAACGGTGTGCTTTG 59.579 43.478 0.00 0.00 34.93 2.77
260 261 3.065648 ACGAATTTAACGGTGTGCTTTGT 59.934 39.130 0.00 0.00 34.93 2.83
261 262 3.420576 CGAATTTAACGGTGTGCTTTGTG 59.579 43.478 0.00 0.00 0.00 3.33
262 263 4.356289 GAATTTAACGGTGTGCTTTGTGT 58.644 39.130 0.00 0.00 0.00 3.72
263 264 5.502153 AATTTAACGGTGTGCTTTGTGTA 57.498 34.783 0.00 0.00 0.00 2.90
264 265 4.959596 TTTAACGGTGTGCTTTGTGTAA 57.040 36.364 0.00 0.00 0.00 2.41
265 266 4.539509 TTAACGGTGTGCTTTGTGTAAG 57.460 40.909 0.00 0.00 36.90 2.34
266 267 2.032680 ACGGTGTGCTTTGTGTAAGT 57.967 45.000 0.00 0.00 36.19 2.24
267 268 2.361789 ACGGTGTGCTTTGTGTAAGTT 58.638 42.857 0.00 0.00 36.19 2.66
268 269 2.096819 ACGGTGTGCTTTGTGTAAGTTG 59.903 45.455 0.00 0.00 36.19 3.16
269 270 2.459934 GGTGTGCTTTGTGTAAGTTGC 58.540 47.619 0.00 0.00 36.19 4.17
270 271 2.159310 GGTGTGCTTTGTGTAAGTTGCA 60.159 45.455 0.00 0.00 36.19 4.08
271 272 3.490761 GGTGTGCTTTGTGTAAGTTGCAT 60.491 43.478 0.00 0.00 36.19 3.96
272 273 3.486841 GTGTGCTTTGTGTAAGTTGCATG 59.513 43.478 0.00 0.00 36.19 4.06
273 274 3.130164 TGTGCTTTGTGTAAGTTGCATGT 59.870 39.130 0.00 0.00 36.19 3.21
274 275 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
275 276 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
276 277 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
277 278 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
278 279 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
279 280 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
280 281 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
309 310 7.906160 TGCTTTAGTATTCGATCAAAGTTAGC 58.094 34.615 0.00 0.00 0.00 3.09
310 311 7.011109 TGCTTTAGTATTCGATCAAAGTTAGCC 59.989 37.037 0.00 0.00 0.00 3.93
311 312 7.224949 GCTTTAGTATTCGATCAAAGTTAGCCT 59.775 37.037 0.00 0.00 0.00 4.58
312 313 8.644318 TTTAGTATTCGATCAAAGTTAGCCTC 57.356 34.615 0.00 0.00 0.00 4.70
313 314 5.282510 AGTATTCGATCAAAGTTAGCCTCG 58.717 41.667 0.00 0.00 0.00 4.63
314 315 3.861276 TTCGATCAAAGTTAGCCTCGA 57.139 42.857 0.00 0.00 33.76 4.04
315 316 3.861276 TCGATCAAAGTTAGCCTCGAA 57.139 42.857 0.00 0.00 32.78 3.71
316 317 4.182693 TCGATCAAAGTTAGCCTCGAAA 57.817 40.909 0.00 0.00 32.78 3.46
317 318 4.562082 TCGATCAAAGTTAGCCTCGAAAA 58.438 39.130 0.00 0.00 32.78 2.29
318 319 4.387862 TCGATCAAAGTTAGCCTCGAAAAC 59.612 41.667 0.00 0.00 32.78 2.43
319 320 4.435651 CGATCAAAGTTAGCCTCGAAAACC 60.436 45.833 0.00 0.00 0.00 3.27
320 321 2.803956 TCAAAGTTAGCCTCGAAAACCG 59.196 45.455 0.00 0.00 40.25 4.44
321 322 1.154197 AAGTTAGCCTCGAAAACCGC 58.846 50.000 0.00 0.00 38.37 5.68
322 323 0.034337 AGTTAGCCTCGAAAACCGCA 59.966 50.000 0.00 0.00 38.37 5.69
323 324 1.084289 GTTAGCCTCGAAAACCGCAT 58.916 50.000 0.00 0.00 38.37 4.73
324 325 1.467342 GTTAGCCTCGAAAACCGCATT 59.533 47.619 0.00 0.00 38.37 3.56
325 326 2.674357 GTTAGCCTCGAAAACCGCATTA 59.326 45.455 0.00 0.00 38.37 1.90
326 327 1.369625 AGCCTCGAAAACCGCATTAG 58.630 50.000 0.00 0.00 38.37 1.73
327 328 0.377203 GCCTCGAAAACCGCATTAGG 59.623 55.000 0.00 0.00 38.37 2.69
328 329 0.377203 CCTCGAAAACCGCATTAGGC 59.623 55.000 0.00 0.00 38.37 3.93
329 330 0.377203 CTCGAAAACCGCATTAGGCC 59.623 55.000 0.00 0.00 40.31 5.19
330 331 1.027792 TCGAAAACCGCATTAGGCCC 61.028 55.000 0.00 0.00 40.31 5.80
331 332 1.029947 CGAAAACCGCATTAGGCCCT 61.030 55.000 0.00 0.00 40.31 5.19
332 333 1.744456 CGAAAACCGCATTAGGCCCTA 60.744 52.381 0.00 0.00 40.31 3.53
333 334 2.583143 GAAAACCGCATTAGGCCCTAT 58.417 47.619 0.00 0.00 40.31 2.57
334 335 3.746940 GAAAACCGCATTAGGCCCTATA 58.253 45.455 0.00 0.00 40.31 1.31
335 336 4.332828 GAAAACCGCATTAGGCCCTATAT 58.667 43.478 0.00 0.00 40.31 0.86
336 337 5.493809 GAAAACCGCATTAGGCCCTATATA 58.506 41.667 0.00 0.00 40.31 0.86
337 338 4.755266 AACCGCATTAGGCCCTATATAG 57.245 45.455 0.00 2.46 40.31 1.31
338 339 3.990369 ACCGCATTAGGCCCTATATAGA 58.010 45.455 11.53 0.00 40.31 1.98
339 340 4.557705 ACCGCATTAGGCCCTATATAGAT 58.442 43.478 11.53 0.00 40.31 1.98
340 341 4.345257 ACCGCATTAGGCCCTATATAGATG 59.655 45.833 11.53 6.87 40.31 2.90
341 342 4.262635 CCGCATTAGGCCCTATATAGATGG 60.263 50.000 11.53 6.04 40.31 3.51
342 343 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
343 344 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
344 345 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
345 346 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
346 347 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
347 348 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
348 349 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
349 350 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
350 351 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
351 352 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
352 353 5.042979 CCCTATATAGATGGAAGGAGGGAGT 60.043 48.000 11.53 0.00 44.48 3.85
353 354 6.162420 CCCTATATAGATGGAAGGAGGGAGTA 59.838 46.154 11.53 0.00 44.48 2.59
354 355 7.146851 CCCTATATAGATGGAAGGAGGGAGTAT 60.147 44.444 11.53 0.00 44.48 2.12
355 356 8.961134 CCTATATAGATGGAAGGAGGGAGTATA 58.039 40.741 11.53 0.00 0.00 1.47
358 359 5.688220 AGATGGAAGGAGGGAGTATAAGA 57.312 43.478 0.00 0.00 0.00 2.10
359 360 5.650283 AGATGGAAGGAGGGAGTATAAGAG 58.350 45.833 0.00 0.00 0.00 2.85
360 361 3.577919 TGGAAGGAGGGAGTATAAGAGC 58.422 50.000 0.00 0.00 0.00 4.09
361 362 3.052109 TGGAAGGAGGGAGTATAAGAGCA 60.052 47.826 0.00 0.00 0.00 4.26
362 363 4.164204 GGAAGGAGGGAGTATAAGAGCAT 58.836 47.826 0.00 0.00 0.00 3.79
363 364 4.020662 GGAAGGAGGGAGTATAAGAGCATG 60.021 50.000 0.00 0.00 0.00 4.06
364 365 4.477536 AGGAGGGAGTATAAGAGCATGA 57.522 45.455 0.00 0.00 0.00 3.07
365 366 5.022227 AGGAGGGAGTATAAGAGCATGAT 57.978 43.478 0.00 0.00 0.00 2.45
366 367 5.410602 AGGAGGGAGTATAAGAGCATGATT 58.589 41.667 0.00 0.00 0.00 2.57
367 368 6.565974 AGGAGGGAGTATAAGAGCATGATTA 58.434 40.000 0.00 0.00 0.00 1.75
368 369 7.019388 AGGAGGGAGTATAAGAGCATGATTAA 58.981 38.462 0.00 0.00 0.00 1.40
369 370 7.682028 AGGAGGGAGTATAAGAGCATGATTAAT 59.318 37.037 0.00 0.00 0.00 1.40
370 371 8.982723 GGAGGGAGTATAAGAGCATGATTAATA 58.017 37.037 0.00 0.00 0.00 0.98
372 373 9.554053 AGGGAGTATAAGAGCATGATTAATAGT 57.446 33.333 0.00 0.00 0.00 2.12
381 382 7.271511 AGAGCATGATTAATAGTATAGCCAGC 58.728 38.462 0.00 0.00 0.00 4.85
382 383 7.125507 AGAGCATGATTAATAGTATAGCCAGCT 59.874 37.037 0.00 0.00 0.00 4.24
383 384 7.046652 AGCATGATTAATAGTATAGCCAGCTG 58.953 38.462 6.78 6.78 0.00 4.24
384 385 6.238320 GCATGATTAATAGTATAGCCAGCTGC 60.238 42.308 8.66 3.91 41.71 5.25
406 407 1.972872 GCTATAAGCCAGTGCCATGT 58.027 50.000 0.00 0.00 38.69 3.21
407 408 1.876156 GCTATAAGCCAGTGCCATGTC 59.124 52.381 0.00 0.00 38.69 3.06
408 409 2.746142 GCTATAAGCCAGTGCCATGTCA 60.746 50.000 0.00 0.00 38.69 3.58
409 410 2.742428 ATAAGCCAGTGCCATGTCAT 57.258 45.000 0.00 0.00 38.69 3.06
410 411 2.042686 TAAGCCAGTGCCATGTCATC 57.957 50.000 0.00 0.00 38.69 2.92
411 412 0.330604 AAGCCAGTGCCATGTCATCT 59.669 50.000 0.00 0.00 38.69 2.90
412 413 1.206878 AGCCAGTGCCATGTCATCTA 58.793 50.000 0.00 0.00 38.69 1.98
413 414 1.134280 AGCCAGTGCCATGTCATCTAC 60.134 52.381 0.00 0.00 38.69 2.59
414 415 1.407299 GCCAGTGCCATGTCATCTACA 60.407 52.381 0.00 0.00 43.86 2.74
415 416 2.558378 CCAGTGCCATGTCATCTACAG 58.442 52.381 0.00 0.00 42.70 2.74
416 417 1.938577 CAGTGCCATGTCATCTACAGC 59.061 52.381 0.00 0.00 42.70 4.40
417 418 1.134280 AGTGCCATGTCATCTACAGCC 60.134 52.381 0.00 0.00 42.70 4.85
418 419 0.181114 TGCCATGTCATCTACAGCCC 59.819 55.000 0.00 0.00 42.70 5.19
419 420 0.181114 GCCATGTCATCTACAGCCCA 59.819 55.000 0.00 0.00 42.70 5.36
420 421 1.202855 GCCATGTCATCTACAGCCCAT 60.203 52.381 0.00 0.00 42.70 4.00
421 422 2.775890 CCATGTCATCTACAGCCCATC 58.224 52.381 0.00 0.00 42.70 3.51
422 423 2.371179 CCATGTCATCTACAGCCCATCT 59.629 50.000 0.00 0.00 42.70 2.90
423 424 3.181447 CCATGTCATCTACAGCCCATCTT 60.181 47.826 0.00 0.00 42.70 2.40
424 425 4.040829 CCATGTCATCTACAGCCCATCTTA 59.959 45.833 0.00 0.00 42.70 2.10
425 426 5.280368 CCATGTCATCTACAGCCCATCTTAT 60.280 44.000 0.00 0.00 42.70 1.73
426 427 6.070596 CCATGTCATCTACAGCCCATCTTATA 60.071 42.308 0.00 0.00 42.70 0.98
427 428 6.596309 TGTCATCTACAGCCCATCTTATAG 57.404 41.667 0.00 0.00 33.01 1.31
428 429 6.077993 TGTCATCTACAGCCCATCTTATAGT 58.922 40.000 0.00 0.00 33.01 2.12
429 430 6.209589 TGTCATCTACAGCCCATCTTATAGTC 59.790 42.308 0.00 0.00 33.01 2.59
430 431 6.209589 GTCATCTACAGCCCATCTTATAGTCA 59.790 42.308 0.00 0.00 0.00 3.41
431 432 6.782494 TCATCTACAGCCCATCTTATAGTCAA 59.218 38.462 0.00 0.00 0.00 3.18
432 433 6.406692 TCTACAGCCCATCTTATAGTCAAC 57.593 41.667 0.00 0.00 0.00 3.18
433 434 5.897250 TCTACAGCCCATCTTATAGTCAACA 59.103 40.000 0.00 0.00 0.00 3.33
434 435 5.636903 ACAGCCCATCTTATAGTCAACAT 57.363 39.130 0.00 0.00 0.00 2.71
435 436 5.371526 ACAGCCCATCTTATAGTCAACATG 58.628 41.667 0.00 0.00 0.00 3.21
436 437 5.104360 ACAGCCCATCTTATAGTCAACATGT 60.104 40.000 0.00 0.00 0.00 3.21
437 438 6.099701 ACAGCCCATCTTATAGTCAACATGTA 59.900 38.462 0.00 0.00 0.00 2.29
438 439 7.164122 CAGCCCATCTTATAGTCAACATGTAT 58.836 38.462 0.00 0.00 0.00 2.29
439 440 8.314021 CAGCCCATCTTATAGTCAACATGTATA 58.686 37.037 0.00 0.00 0.00 1.47
440 441 8.880244 AGCCCATCTTATAGTCAACATGTATAA 58.120 33.333 0.00 0.00 0.00 0.98
441 442 9.672673 GCCCATCTTATAGTCAACATGTATAAT 57.327 33.333 0.00 0.00 0.00 1.28
489 490 5.669164 TTTTATTATGTGGCCCACCTTTC 57.331 39.130 12.25 0.00 36.63 2.62
490 491 2.917713 ATTATGTGGCCCACCTTTCA 57.082 45.000 12.25 0.00 36.63 2.69
491 492 2.917713 TTATGTGGCCCACCTTTCAT 57.082 45.000 12.25 0.00 36.63 2.57
492 493 2.917713 TATGTGGCCCACCTTTCATT 57.082 45.000 12.25 0.00 36.63 2.57
493 494 1.560505 ATGTGGCCCACCTTTCATTC 58.439 50.000 12.25 0.00 36.63 2.67
494 495 0.482446 TGTGGCCCACCTTTCATTCT 59.518 50.000 12.25 0.00 36.63 2.40
495 496 1.133199 TGTGGCCCACCTTTCATTCTT 60.133 47.619 12.25 0.00 36.63 2.52
496 497 2.109128 TGTGGCCCACCTTTCATTCTTA 59.891 45.455 12.25 0.00 36.63 2.10
497 498 2.492088 GTGGCCCACCTTTCATTCTTAC 59.508 50.000 1.17 0.00 36.63 2.34
498 499 2.109128 TGGCCCACCTTTCATTCTTACA 59.891 45.455 0.00 0.00 36.63 2.41
499 500 3.161866 GGCCCACCTTTCATTCTTACAA 58.838 45.455 0.00 0.00 0.00 2.41
500 501 3.576550 GGCCCACCTTTCATTCTTACAAA 59.423 43.478 0.00 0.00 0.00 2.83
501 502 4.039852 GGCCCACCTTTCATTCTTACAAAA 59.960 41.667 0.00 0.00 0.00 2.44
502 503 5.279960 GGCCCACCTTTCATTCTTACAAAAT 60.280 40.000 0.00 0.00 0.00 1.82
503 504 5.639082 GCCCACCTTTCATTCTTACAAAATG 59.361 40.000 0.00 0.00 35.81 2.32
504 505 5.639082 CCCACCTTTCATTCTTACAAAATGC 59.361 40.000 0.00 0.00 34.73 3.56
505 506 5.639082 CCACCTTTCATTCTTACAAAATGCC 59.361 40.000 0.00 0.00 34.73 4.40
506 507 6.458210 CACCTTTCATTCTTACAAAATGCCT 58.542 36.000 0.00 0.00 34.73 4.75
507 508 7.309744 CCACCTTTCATTCTTACAAAATGCCTA 60.310 37.037 0.00 0.00 34.73 3.93
508 509 7.756722 CACCTTTCATTCTTACAAAATGCCTAG 59.243 37.037 0.00 0.00 34.73 3.02
509 510 7.093771 ACCTTTCATTCTTACAAAATGCCTAGG 60.094 37.037 3.67 3.67 34.73 3.02
510 511 7.122650 CCTTTCATTCTTACAAAATGCCTAGGA 59.877 37.037 14.75 0.00 34.73 2.94
511 512 7.630242 TTCATTCTTACAAAATGCCTAGGAG 57.370 36.000 14.75 0.00 34.73 3.69
512 513 5.590259 TCATTCTTACAAAATGCCTAGGAGC 59.410 40.000 14.75 0.00 34.73 4.70
519 520 4.757773 TGCCTAGGAGCACGTACT 57.242 55.556 14.75 0.00 38.00 2.73
520 521 3.888424 TGCCTAGGAGCACGTACTA 57.112 52.632 14.75 0.00 38.00 1.82
521 522 1.676746 TGCCTAGGAGCACGTACTAG 58.323 55.000 14.75 0.00 38.00 2.57
522 523 1.211212 TGCCTAGGAGCACGTACTAGA 59.789 52.381 14.75 0.00 38.00 2.43
523 524 1.874872 GCCTAGGAGCACGTACTAGAG 59.125 57.143 14.75 2.09 37.06 2.43
524 525 1.874872 CCTAGGAGCACGTACTAGAGC 59.125 57.143 1.05 1.96 37.06 4.09
525 526 2.485835 CCTAGGAGCACGTACTAGAGCT 60.486 54.545 1.05 6.46 40.61 4.09
526 527 1.384525 AGGAGCACGTACTAGAGCTG 58.615 55.000 0.00 0.00 38.14 4.24
527 528 0.382515 GGAGCACGTACTAGAGCTGG 59.617 60.000 0.00 0.00 38.14 4.85
528 529 0.248702 GAGCACGTACTAGAGCTGGC 60.249 60.000 0.00 0.00 38.14 4.85
529 530 0.681564 AGCACGTACTAGAGCTGGCT 60.682 55.000 0.00 0.00 36.72 4.75
530 531 0.248702 GCACGTACTAGAGCTGGCTC 60.249 60.000 14.02 14.02 43.03 4.70
538 539 4.996976 GAGCTGGCTCTTCACGAA 57.003 55.556 14.51 0.00 39.80 3.85
539 540 2.748268 GAGCTGGCTCTTCACGAAG 58.252 57.895 14.51 0.08 39.80 3.79
540 541 0.244994 GAGCTGGCTCTTCACGAAGA 59.755 55.000 14.51 9.08 44.47 2.87
546 547 3.773370 TCTTCACGAAGAGCCCGT 58.227 55.556 5.38 0.00 42.06 5.28
547 548 2.046938 TCTTCACGAAGAGCCCGTT 58.953 52.632 5.38 0.00 42.06 4.44
548 549 0.391597 TCTTCACGAAGAGCCCGTTT 59.608 50.000 5.38 0.00 42.06 3.60
549 550 1.614903 TCTTCACGAAGAGCCCGTTTA 59.385 47.619 5.38 0.00 42.06 2.01
550 551 1.725164 CTTCACGAAGAGCCCGTTTAC 59.275 52.381 0.20 0.00 40.79 2.01
551 552 0.037975 TCACGAAGAGCCCGTTTACC 60.038 55.000 0.00 0.00 38.29 2.85
552 553 0.037605 CACGAAGAGCCCGTTTACCT 60.038 55.000 0.00 0.00 38.29 3.08
553 554 0.683412 ACGAAGAGCCCGTTTACCTT 59.317 50.000 0.00 0.00 36.83 3.50
554 555 1.337541 ACGAAGAGCCCGTTTACCTTC 60.338 52.381 0.00 0.00 36.83 3.46
555 556 1.067071 CGAAGAGCCCGTTTACCTTCT 60.067 52.381 0.00 0.00 33.14 2.85
556 557 2.619147 GAAGAGCCCGTTTACCTTCTC 58.381 52.381 0.00 0.00 32.72 2.87
557 558 1.939980 AGAGCCCGTTTACCTTCTCT 58.060 50.000 0.00 0.00 0.00 3.10
558 559 1.826096 AGAGCCCGTTTACCTTCTCTC 59.174 52.381 0.00 0.00 0.00 3.20
559 560 1.826096 GAGCCCGTTTACCTTCTCTCT 59.174 52.381 0.00 0.00 0.00 3.10
560 561 1.826096 AGCCCGTTTACCTTCTCTCTC 59.174 52.381 0.00 0.00 0.00 3.20
561 562 1.134759 GCCCGTTTACCTTCTCTCTCC 60.135 57.143 0.00 0.00 0.00 3.71
562 563 2.458620 CCCGTTTACCTTCTCTCTCCT 58.541 52.381 0.00 0.00 0.00 3.69
563 564 2.832733 CCCGTTTACCTTCTCTCTCCTT 59.167 50.000 0.00 0.00 0.00 3.36
564 565 3.261137 CCCGTTTACCTTCTCTCTCCTTT 59.739 47.826 0.00 0.00 0.00 3.11
565 566 4.262938 CCCGTTTACCTTCTCTCTCCTTTT 60.263 45.833 0.00 0.00 0.00 2.27
566 567 4.930405 CCGTTTACCTTCTCTCTCCTTTTC 59.070 45.833 0.00 0.00 0.00 2.29
567 568 5.279556 CCGTTTACCTTCTCTCTCCTTTTCT 60.280 44.000 0.00 0.00 0.00 2.52
568 569 5.865013 CGTTTACCTTCTCTCTCCTTTTCTC 59.135 44.000 0.00 0.00 0.00 2.87
569 570 6.294843 CGTTTACCTTCTCTCTCCTTTTCTCT 60.295 42.308 0.00 0.00 0.00 3.10
570 571 7.446769 GTTTACCTTCTCTCTCCTTTTCTCTT 58.553 38.462 0.00 0.00 0.00 2.85
571 572 7.619512 TTACCTTCTCTCTCCTTTTCTCTTT 57.380 36.000 0.00 0.00 0.00 2.52
572 573 6.109156 ACCTTCTCTCTCCTTTTCTCTTTC 57.891 41.667 0.00 0.00 0.00 2.62
573 574 5.012664 ACCTTCTCTCTCCTTTTCTCTTTCC 59.987 44.000 0.00 0.00 0.00 3.13
574 575 5.248248 CCTTCTCTCTCCTTTTCTCTTTCCT 59.752 44.000 0.00 0.00 0.00 3.36
575 576 5.993748 TCTCTCTCCTTTTCTCTTTCCTC 57.006 43.478 0.00 0.00 0.00 3.71
576 577 4.775253 TCTCTCTCCTTTTCTCTTTCCTCC 59.225 45.833 0.00 0.00 0.00 4.30
577 578 4.493618 TCTCTCCTTTTCTCTTTCCTCCA 58.506 43.478 0.00 0.00 0.00 3.86
578 579 4.907875 TCTCTCCTTTTCTCTTTCCTCCAA 59.092 41.667 0.00 0.00 0.00 3.53
579 580 4.974399 TCTCCTTTTCTCTTTCCTCCAAC 58.026 43.478 0.00 0.00 0.00 3.77
580 581 4.660771 TCTCCTTTTCTCTTTCCTCCAACT 59.339 41.667 0.00 0.00 0.00 3.16
581 582 5.844516 TCTCCTTTTCTCTTTCCTCCAACTA 59.155 40.000 0.00 0.00 0.00 2.24
582 583 6.329197 TCTCCTTTTCTCTTTCCTCCAACTAA 59.671 38.462 0.00 0.00 0.00 2.24
583 584 6.906848 TCCTTTTCTCTTTCCTCCAACTAAA 58.093 36.000 0.00 0.00 0.00 1.85
584 585 6.771267 TCCTTTTCTCTTTCCTCCAACTAAAC 59.229 38.462 0.00 0.00 0.00 2.01
585 586 6.546034 CCTTTTCTCTTTCCTCCAACTAAACA 59.454 38.462 0.00 0.00 0.00 2.83
586 587 7.255277 CCTTTTCTCTTTCCTCCAACTAAACAG 60.255 40.741 0.00 0.00 0.00 3.16
587 588 6.494666 TTCTCTTTCCTCCAACTAAACAGA 57.505 37.500 0.00 0.00 0.00 3.41
588 589 6.494666 TCTCTTTCCTCCAACTAAACAGAA 57.505 37.500 0.00 0.00 0.00 3.02
589 590 6.895782 TCTCTTTCCTCCAACTAAACAGAAA 58.104 36.000 0.00 0.00 0.00 2.52
590 591 7.518188 TCTCTTTCCTCCAACTAAACAGAAAT 58.482 34.615 0.00 0.00 0.00 2.17
591 592 8.656806 TCTCTTTCCTCCAACTAAACAGAAATA 58.343 33.333 0.00 0.00 0.00 1.40
592 593 9.454859 CTCTTTCCTCCAACTAAACAGAAATAT 57.545 33.333 0.00 0.00 0.00 1.28
636 637 9.297037 AGCCCGCTAATTCATTTTTATTATACT 57.703 29.630 0.00 0.00 0.00 2.12
637 638 9.908152 GCCCGCTAATTCATTTTTATTATACTT 57.092 29.630 0.00 0.00 0.00 2.24
665 666 1.603802 CAAGTGATGCAAAGGTGACGT 59.396 47.619 0.00 0.00 0.00 4.34
666 667 1.229428 AGTGATGCAAAGGTGACGTG 58.771 50.000 0.00 0.00 0.00 4.49
668 669 1.210155 GATGCAAAGGTGACGTGCC 59.790 57.895 0.00 0.00 43.20 5.01
669 670 1.228245 ATGCAAAGGTGACGTGCCT 60.228 52.632 0.00 0.00 43.20 4.75
671 672 1.891919 GCAAAGGTGACGTGCCTGA 60.892 57.895 8.81 0.00 39.48 3.86
672 673 1.237285 GCAAAGGTGACGTGCCTGAT 61.237 55.000 8.81 0.00 39.48 2.90
673 674 0.798776 CAAAGGTGACGTGCCTGATC 59.201 55.000 8.81 0.00 36.30 2.92
675 676 2.507110 AAGGTGACGTGCCTGATCCG 62.507 60.000 8.81 0.00 36.30 4.18
676 677 2.509336 GTGACGTGCCTGATCCGG 60.509 66.667 0.00 0.00 0.00 5.14
677 678 2.994995 TGACGTGCCTGATCCGGT 60.995 61.111 0.00 0.00 0.00 5.28
678 679 2.202756 GACGTGCCTGATCCGGTC 60.203 66.667 0.00 0.00 0.00 4.79
680 681 3.770040 CGTGCCTGATCCGGTCCA 61.770 66.667 0.00 0.00 0.00 4.02
682 683 3.785859 TGCCTGATCCGGTCCAGC 61.786 66.667 16.70 12.01 0.00 4.85
683 684 3.474570 GCCTGATCCGGTCCAGCT 61.475 66.667 16.70 0.00 0.00 4.24
684 685 3.036429 GCCTGATCCGGTCCAGCTT 62.036 63.158 16.70 0.00 0.00 3.74
685 686 1.153289 CCTGATCCGGTCCAGCTTG 60.153 63.158 16.70 4.13 0.00 4.01
687 688 0.460987 CTGATCCGGTCCAGCTTGAC 60.461 60.000 9.43 9.43 34.42 3.18
692 693 2.990479 GGTCCAGCTTGACCGGAT 59.010 61.111 20.29 0.00 44.98 4.18
694 695 1.296715 GTCCAGCTTGACCGGATGT 59.703 57.895 9.46 0.00 0.00 3.06
696 697 0.824109 TCCAGCTTGACCGGATGTAG 59.176 55.000 9.46 0.31 0.00 2.74
703 1171 3.862642 GCTTGACCGGATGTAGGATGATC 60.863 52.174 9.46 0.00 0.00 2.92
704 1172 2.957474 TGACCGGATGTAGGATGATCA 58.043 47.619 9.46 0.00 0.00 2.92
717 1185 8.750515 TGTAGGATGATCATCTTGCAATAAAA 57.249 30.769 28.17 10.56 36.80 1.52
1053 1533 0.750182 CCGTCTGTCTCCTCCTCCTC 60.750 65.000 0.00 0.00 0.00 3.71
1054 1534 0.750182 CGTCTGTCTCCTCCTCCTCC 60.750 65.000 0.00 0.00 0.00 4.30
1055 1535 0.629058 GTCTGTCTCCTCCTCCTCCT 59.371 60.000 0.00 0.00 0.00 3.69
1056 1536 0.923358 TCTGTCTCCTCCTCCTCCTC 59.077 60.000 0.00 0.00 0.00 3.71
1057 1537 0.106217 CTGTCTCCTCCTCCTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
1058 1538 1.231928 GTCTCCTCCTCCTCCTCCC 59.768 68.421 0.00 0.00 0.00 4.30
1059 1539 2.015726 TCTCCTCCTCCTCCTCCCC 61.016 68.421 0.00 0.00 0.00 4.81
1060 1540 3.036959 TCCTCCTCCTCCTCCCCC 61.037 72.222 0.00 0.00 0.00 5.40
1061 1541 3.039526 CCTCCTCCTCCTCCCCCT 61.040 72.222 0.00 0.00 0.00 4.79
1203 1683 4.229876 GTGGATTTGCTAACTTCTGTTGC 58.770 43.478 0.00 0.00 37.59 4.17
1206 1686 3.354089 TTTGCTAACTTCTGTTGCTGC 57.646 42.857 0.00 0.00 37.59 5.25
1322 1802 3.368427 CCTTCAAGATCTCCGCTACAACA 60.368 47.826 0.00 0.00 0.00 3.33
1332 1812 2.028748 TCCGCTACAACAGGTAAACCTC 60.029 50.000 0.00 0.00 46.65 3.85
1400 1888 4.035675 GCCTACTTTGTTCTGCCATGTATC 59.964 45.833 0.00 0.00 0.00 2.24
1461 1949 7.592885 TCGGGAGTTAAGCTTTGTAGTATAT 57.407 36.000 3.20 0.00 0.00 0.86
1463 1951 7.504911 TCGGGAGTTAAGCTTTGTAGTATATCT 59.495 37.037 3.20 0.00 0.00 1.98
1619 2110 2.221169 TGTGGCTGTGAAGTTGTGATC 58.779 47.619 0.00 0.00 0.00 2.92
1712 2218 3.523606 TTTCTGCTTTGCTTTCTTGCA 57.476 38.095 0.00 0.00 41.65 4.08
1809 2315 9.056005 GTGACTTATATGATCCATTGCTGTTAA 57.944 33.333 0.00 0.00 0.00 2.01
1887 2393 7.291566 TGATTTAGTACAAAGTTTGGAGGGAA 58.708 34.615 19.45 8.97 34.12 3.97
1925 2431 1.527311 GTGAAGTTCTTCAGTCGGTGC 59.473 52.381 14.42 0.00 0.00 5.01
2033 2539 7.393515 AGAAACTATTTTCCCATGTACAGAACC 59.606 37.037 0.33 0.00 42.00 3.62
2058 2564 8.526147 CCAAAGAGTCCTTGACATGAATATTTT 58.474 33.333 0.00 0.00 34.60 1.82
2138 2644 7.272978 AGCTGGCGATAATCTCTTAAAACTTA 58.727 34.615 0.00 0.00 0.00 2.24
2194 2700 6.870769 CAAGAGTCCTTGGCATGAATATTTT 58.129 36.000 0.00 0.00 44.58 1.82
2253 2759 8.788799 TGGCTCTAGATATATAACCCTTAGCTA 58.211 37.037 0.00 0.00 0.00 3.32
2630 3314 2.232696 TCGCTGTACCAGAATAGTGCAA 59.767 45.455 0.00 0.00 32.44 4.08
2647 3331 4.821805 AGTGCAAACTTAAGAGCAGCTTAA 59.178 37.500 10.09 10.25 44.61 1.85
2703 3387 1.457303 GAGTAGTGTGCAGCAAGAACG 59.543 52.381 0.00 0.00 0.00 3.95
2804 3489 2.093890 TGCCTTAGCATTCACATGTGG 58.906 47.619 25.16 10.87 46.52 4.17
2912 3598 2.679837 GCATTGTGAGGGTCTGTATGTG 59.320 50.000 0.00 0.00 0.00 3.21
2977 3672 5.244402 TCATGTTCTGATTCATGCCAACTTT 59.756 36.000 14.35 0.00 40.54 2.66
2996 3691 5.903923 ACTTTCCCTACTTCAAATGGGATT 58.096 37.500 0.00 0.00 46.80 3.01
3006 3701 5.768164 ACTTCAAATGGGATTCTTAACGTGT 59.232 36.000 0.00 0.00 0.00 4.49
3069 3764 4.272489 TCTCTAATTTGCCTGTTGGATGG 58.728 43.478 0.00 0.00 34.57 3.51
3128 3823 5.350091 GCCTTTACTTTGAACTGCAAAAACA 59.650 36.000 0.00 0.00 45.26 2.83
3435 4131 0.603065 GCCCGGCAACTTCTGATTTT 59.397 50.000 3.91 0.00 0.00 1.82
3531 4229 9.961265 CTGTTTCTGAATTATGATGTGCATATT 57.039 29.630 0.00 0.00 39.15 1.28
3550 4249 7.147689 TGCATATTTTCTCATTACTGGGCATTT 60.148 33.333 0.00 0.00 0.00 2.32
3592 4291 8.177013 CAGATGTTCATCGAATTGTTTGTATCA 58.823 33.333 7.08 0.00 0.00 2.15
3718 4417 0.690192 TGCATCTCCTTCGGGTTCAA 59.310 50.000 0.00 0.00 36.28 2.69
3847 4546 5.652744 ATGTTTTCTGTGTAACACTCGTC 57.347 39.130 0.00 0.00 45.67 4.20
4093 7170 5.050634 CAGATTGTTTCAAGTTTGCATGTGG 60.051 40.000 0.00 0.00 0.00 4.17
4095 7172 1.866601 GTTTCAAGTTTGCATGTGGCC 59.133 47.619 0.00 0.00 43.89 5.36
4117 7194 1.335872 CGGGCAAGAGCGTTGAAAAAT 60.336 47.619 6.07 0.00 43.41 1.82
4119 7196 3.130633 GGGCAAGAGCGTTGAAAAATTT 58.869 40.909 6.07 0.00 43.41 1.82
4132 7210 7.364200 CGTTGAAAAATTTATGTCCCAGTACA 58.636 34.615 0.00 0.00 0.00 2.90
4149 7227 3.363920 AACATGGGTTGGGGTGGT 58.636 55.556 0.00 0.00 35.46 4.16
4150 7228 1.629297 AACATGGGTTGGGGTGGTT 59.371 52.632 0.00 0.00 35.46 3.67
4160 7238 0.184933 TGGGGTGGTTGTTTGGAGAG 59.815 55.000 0.00 0.00 0.00 3.20
4165 7243 0.771127 TGGTTGTTTGGAGAGAGGGG 59.229 55.000 0.00 0.00 0.00 4.79
4223 7301 6.749036 ATAATCCTTAAGGGTGTGTCTAGG 57.251 41.667 21.53 0.00 36.25 3.02
4224 7302 3.839323 TCCTTAAGGGTGTGTCTAGGA 57.161 47.619 21.53 0.00 36.25 2.94
4226 7304 3.077088 TCCTTAAGGGTGTGTCTAGGACT 59.923 47.826 21.53 0.00 36.25 3.85
4227 7305 3.838903 CCTTAAGGGTGTGTCTAGGACTT 59.161 47.826 14.25 0.00 33.15 3.01
4228 7306 4.081586 CCTTAAGGGTGTGTCTAGGACTTC 60.082 50.000 14.25 0.00 33.15 3.01
4230 7308 4.399483 AAGGGTGTGTCTAGGACTTCTA 57.601 45.455 0.00 0.00 33.15 2.10
4231 7309 3.699413 AGGGTGTGTCTAGGACTTCTAC 58.301 50.000 0.00 0.00 33.15 2.59
4232 7310 2.759535 GGGTGTGTCTAGGACTTCTACC 59.240 54.545 0.00 0.00 33.15 3.18
4233 7311 3.563915 GGGTGTGTCTAGGACTTCTACCT 60.564 52.174 0.00 0.00 41.05 3.08
4234 7312 3.444388 GGTGTGTCTAGGACTTCTACCTG 59.556 52.174 0.00 0.00 38.31 4.00
4235 7313 4.333690 GTGTGTCTAGGACTTCTACCTGA 58.666 47.826 0.00 0.00 38.31 3.86
4236 7314 4.951094 GTGTGTCTAGGACTTCTACCTGAT 59.049 45.833 0.00 0.00 38.31 2.90
4237 7315 4.950475 TGTGTCTAGGACTTCTACCTGATG 59.050 45.833 0.00 0.00 38.31 3.07
4238 7316 4.951094 GTGTCTAGGACTTCTACCTGATGT 59.049 45.833 0.00 0.00 38.31 3.06
4239 7317 5.066764 GTGTCTAGGACTTCTACCTGATGTC 59.933 48.000 0.00 0.00 44.40 3.06
4246 7324 5.837437 GACTTCTACCTGATGTCCACTATG 58.163 45.833 0.00 0.00 41.35 2.23
4247 7325 5.273208 ACTTCTACCTGATGTCCACTATGT 58.727 41.667 0.00 0.00 0.00 2.29
4248 7326 5.721960 ACTTCTACCTGATGTCCACTATGTT 59.278 40.000 0.00 0.00 0.00 2.71
4249 7327 6.213600 ACTTCTACCTGATGTCCACTATGTTT 59.786 38.462 0.00 0.00 0.00 2.83
4250 7328 5.977635 TCTACCTGATGTCCACTATGTTTG 58.022 41.667 0.00 0.00 0.00 2.93
4251 7329 4.640771 ACCTGATGTCCACTATGTTTGT 57.359 40.909 0.00 0.00 0.00 2.83
4252 7330 4.326826 ACCTGATGTCCACTATGTTTGTG 58.673 43.478 0.00 0.00 35.39 3.33
4253 7331 3.127548 CCTGATGTCCACTATGTTTGTGC 59.872 47.826 0.00 0.00 34.38 4.57
4254 7332 4.005650 CTGATGTCCACTATGTTTGTGCT 58.994 43.478 0.00 0.00 34.38 4.40
4256 7334 4.826733 TGATGTCCACTATGTTTGTGCTTT 59.173 37.500 0.00 0.00 34.38 3.51
4257 7335 5.301551 TGATGTCCACTATGTTTGTGCTTTT 59.698 36.000 0.00 0.00 34.38 2.27
4258 7336 5.590530 TGTCCACTATGTTTGTGCTTTTT 57.409 34.783 0.00 0.00 34.38 1.94
4292 7370 8.696043 TGCATTATTTATTGGAGCTTAGATGT 57.304 30.769 0.00 0.00 0.00 3.06
4293 7371 8.570488 TGCATTATTTATTGGAGCTTAGATGTG 58.430 33.333 0.00 0.00 0.00 3.21
4295 7373 8.517878 CATTATTTATTGGAGCTTAGATGTGGG 58.482 37.037 0.00 0.00 0.00 4.61
4296 7374 4.437682 TTATTGGAGCTTAGATGTGGGG 57.562 45.455 0.00 0.00 0.00 4.96
4297 7375 1.965414 TTGGAGCTTAGATGTGGGGA 58.035 50.000 0.00 0.00 0.00 4.81
4298 7376 1.965414 TGGAGCTTAGATGTGGGGAA 58.035 50.000 0.00 0.00 0.00 3.97
4301 7379 3.269381 TGGAGCTTAGATGTGGGGAAAAT 59.731 43.478 0.00 0.00 0.00 1.82
4302 7380 4.476846 TGGAGCTTAGATGTGGGGAAAATA 59.523 41.667 0.00 0.00 0.00 1.40
4303 7381 5.134339 TGGAGCTTAGATGTGGGGAAAATAT 59.866 40.000 0.00 0.00 0.00 1.28
4304 7382 6.331572 TGGAGCTTAGATGTGGGGAAAATATA 59.668 38.462 0.00 0.00 0.00 0.86
4305 7383 6.655425 GGAGCTTAGATGTGGGGAAAATATAC 59.345 42.308 0.00 0.00 0.00 1.47
4306 7384 7.394144 AGCTTAGATGTGGGGAAAATATACT 57.606 36.000 0.00 0.00 0.00 2.12
4307 7385 7.816411 AGCTTAGATGTGGGGAAAATATACTT 58.184 34.615 0.00 0.00 0.00 2.24
4308 7386 8.945193 AGCTTAGATGTGGGGAAAATATACTTA 58.055 33.333 0.00 0.00 0.00 2.24
4309 7387 9.220767 GCTTAGATGTGGGGAAAATATACTTAG 57.779 37.037 0.00 0.00 0.00 2.18
4313 7391 9.170890 AGATGTGGGGAAAATATACTTAGATGA 57.829 33.333 0.00 0.00 0.00 2.92
4314 7392 9.965902 GATGTGGGGAAAATATACTTAGATGAT 57.034 33.333 0.00 0.00 0.00 2.45
4318 7396 8.537016 TGGGGAAAATATACTTAGATGATACGG 58.463 37.037 0.00 0.00 0.00 4.02
4319 7397 8.537858 GGGGAAAATATACTTAGATGATACGGT 58.462 37.037 0.00 0.00 0.00 4.83
4320 7398 9.367444 GGGAAAATATACTTAGATGATACGGTG 57.633 37.037 0.00 0.00 0.00 4.94
4330 7408 9.742144 ACTTAGATGATACGGTGATATAGACTT 57.258 33.333 0.00 0.00 0.00 3.01
4333 7411 7.753659 AGATGATACGGTGATATAGACTTTCG 58.246 38.462 0.00 0.00 0.00 3.46
4334 7412 6.250344 TGATACGGTGATATAGACTTTCGG 57.750 41.667 0.00 0.00 0.00 4.30
4338 7416 4.202090 ACGGTGATATAGACTTTCGGGAAC 60.202 45.833 0.00 0.00 0.00 3.62
4352 7430 1.396653 GGGAACCGTCGGATCTTAGA 58.603 55.000 20.51 0.00 40.86 2.10
4353 7431 1.962100 GGGAACCGTCGGATCTTAGAT 59.038 52.381 20.51 0.00 40.86 1.98
4354 7432 2.030096 GGGAACCGTCGGATCTTAGATC 60.030 54.545 20.51 13.44 40.86 2.75
4355 7433 2.030096 GGAACCGTCGGATCTTAGATCC 60.030 54.545 26.80 26.80 34.90 3.36
4356 7434 2.359981 ACCGTCGGATCTTAGATCCA 57.640 50.000 32.73 20.62 38.08 3.41
4357 7435 2.231529 ACCGTCGGATCTTAGATCCAG 58.768 52.381 32.73 25.71 38.08 3.86
4358 7436 1.542030 CCGTCGGATCTTAGATCCAGG 59.458 57.143 32.73 27.58 38.08 4.45
4359 7437 1.542030 CGTCGGATCTTAGATCCAGGG 59.458 57.143 32.73 20.59 38.08 4.45
4361 7439 1.503784 TCGGATCTTAGATCCAGGGGT 59.496 52.381 32.73 0.00 38.08 4.95
4362 7440 2.090719 TCGGATCTTAGATCCAGGGGTT 60.091 50.000 32.73 0.00 38.08 4.11
4364 7442 2.224646 GGATCTTAGATCCAGGGGTTGC 60.225 54.545 30.30 5.20 38.09 4.17
4365 7443 2.270434 TCTTAGATCCAGGGGTTGCT 57.730 50.000 0.00 0.00 0.00 3.91
4371 7449 1.348775 ATCCAGGGGTTGCTAGGAGC 61.349 60.000 0.00 0.00 42.82 4.70
4373 7451 1.524482 CAGGGGTTGCTAGGAGCTC 59.476 63.158 4.71 4.71 42.97 4.09
4374 7452 1.081092 AGGGGTTGCTAGGAGCTCA 59.919 57.895 17.19 0.00 42.97 4.26
4376 7454 1.553690 GGGGTTGCTAGGAGCTCACA 61.554 60.000 17.19 4.95 42.97 3.58
4377 7455 0.324943 GGGTTGCTAGGAGCTCACAA 59.675 55.000 17.19 10.97 42.97 3.33
4378 7456 1.271379 GGGTTGCTAGGAGCTCACAAA 60.271 52.381 17.19 0.00 42.97 2.83
4380 7458 2.551071 GGTTGCTAGGAGCTCACAAACT 60.551 50.000 17.19 5.33 42.97 2.66
4382 7460 3.492102 TGCTAGGAGCTCACAAACTTT 57.508 42.857 17.19 0.00 42.97 2.66
4384 7462 4.207165 TGCTAGGAGCTCACAAACTTTTT 58.793 39.130 17.19 0.00 42.97 1.94
4386 7464 5.238650 TGCTAGGAGCTCACAAACTTTTTAC 59.761 40.000 17.19 0.00 42.97 2.01
4388 7466 6.238648 GCTAGGAGCTCACAAACTTTTTACAA 60.239 38.462 17.19 0.00 38.45 2.41
4389 7467 6.524101 AGGAGCTCACAAACTTTTTACAAA 57.476 33.333 17.19 0.00 0.00 2.83
4391 7469 7.382898 AGGAGCTCACAAACTTTTTACAAAAA 58.617 30.769 17.19 0.36 36.53 1.94
4408 7486 3.990959 AAAAAGCCCCTCTAGAGTCTG 57.009 47.619 18.42 7.42 0.00 3.51
4409 7487 1.199615 AAAGCCCCTCTAGAGTCTGC 58.800 55.000 18.42 16.08 0.00 4.26
4410 7488 0.041833 AAGCCCCTCTAGAGTCTGCA 59.958 55.000 18.42 0.00 0.00 4.41
4412 7490 0.905357 GCCCCTCTAGAGTCTGCAAA 59.095 55.000 18.42 0.00 0.00 3.68
4416 7494 4.698575 CCCCTCTAGAGTCTGCAAATTAC 58.301 47.826 18.42 0.00 0.00 1.89
4417 7495 4.363999 CCCTCTAGAGTCTGCAAATTACG 58.636 47.826 18.42 0.00 0.00 3.18
4419 7497 5.394224 CCCTCTAGAGTCTGCAAATTACGAA 60.394 44.000 18.42 0.00 0.00 3.85
4421 7499 6.419413 CCTCTAGAGTCTGCAAATTACGAATC 59.581 42.308 18.42 0.00 0.00 2.52
4422 7500 5.971792 TCTAGAGTCTGCAAATTACGAATCG 59.028 40.000 1.86 0.00 0.00 3.34
4435 7834 8.491152 CAAATTACGAATCGATCTTAGAGCAAT 58.509 33.333 10.55 0.00 0.00 3.56
4447 7846 2.926778 AGAGCAATGAGGCTATCCAC 57.073 50.000 0.00 0.00 45.99 4.02
4450 7849 1.210478 AGCAATGAGGCTATCCACGTT 59.790 47.619 0.00 0.00 43.70 3.99
4452 7851 2.802816 GCAATGAGGCTATCCACGTTAG 59.197 50.000 0.00 0.00 32.09 2.34
4453 7852 2.802816 CAATGAGGCTATCCACGTTAGC 59.197 50.000 8.88 8.88 41.08 3.09
4481 7880 2.842208 TTGTTTGGAGAAACTGTGCG 57.158 45.000 0.00 0.00 41.87 5.34
4486 7885 0.179094 TGGAGAAACTGTGCGTCGTT 60.179 50.000 0.00 0.00 0.00 3.85
4492 7891 2.128128 CTGTGCGTCGTTGCGAAC 60.128 61.111 0.00 0.00 40.63 3.95
4549 7948 1.106944 CCGCTCTCTCTTCCTCTCCC 61.107 65.000 0.00 0.00 0.00 4.30
4561 7960 1.598856 CCTCTCCCTCTTCCTCCCCT 61.599 65.000 0.00 0.00 0.00 4.79
4585 7984 2.668212 CATGGTGTCGTTGCCGGT 60.668 61.111 1.90 0.00 33.95 5.28
4620 8019 1.594833 CGTGGATCCGGGAACAAGA 59.405 57.895 7.39 0.00 0.00 3.02
4623 8022 1.198094 TGGATCCGGGAACAAGAGCA 61.198 55.000 7.39 0.00 0.00 4.26
4624 8023 0.462759 GGATCCGGGAACAAGAGCAG 60.463 60.000 0.00 0.00 0.00 4.24
4629 8028 4.451652 GGAACAAGAGCAGCGCGC 62.452 66.667 26.66 26.66 42.91 6.86
4654 8053 4.065281 GTAGCTGCCCCGTGTCGT 62.065 66.667 0.00 0.00 0.00 4.34
4683 8082 4.722700 AGTTGCTCCGCCCGCATT 62.723 61.111 0.00 0.00 37.22 3.56
4695 8094 2.568090 CGCATTGGCTGTGGGTTC 59.432 61.111 0.00 0.00 38.10 3.62
4696 8095 2.568090 GCATTGGCTGTGGGTTCG 59.432 61.111 0.00 0.00 36.96 3.95
4697 8096 2.568090 CATTGGCTGTGGGTTCGC 59.432 61.111 0.00 0.00 0.00 4.70
4698 8097 2.115052 ATTGGCTGTGGGTTCGCA 59.885 55.556 0.00 0.00 0.00 5.10
4699 8098 2.268076 ATTGGCTGTGGGTTCGCAC 61.268 57.895 12.03 12.03 0.00 5.34
4700 8099 2.974692 ATTGGCTGTGGGTTCGCACA 62.975 55.000 18.65 18.65 0.00 4.57
4712 8111 3.230540 CGCACACGAACACGTCAT 58.769 55.556 0.00 0.00 43.93 3.06
4713 8112 1.562691 CGCACACGAACACGTCATT 59.437 52.632 0.00 0.00 43.93 2.57
4714 8113 0.717896 CGCACACGAACACGTCATTG 60.718 55.000 0.00 0.00 43.93 2.82
4715 8114 0.303493 GCACACGAACACGTCATTGT 59.697 50.000 0.00 0.00 38.21 2.71
4716 8115 1.915537 GCACACGAACACGTCATTGTG 60.916 52.381 13.47 13.47 45.41 3.33
4724 8123 2.448926 CACGTCATTGTGTACCTCCA 57.551 50.000 0.00 0.00 35.12 3.86
4725 8124 2.761559 CACGTCATTGTGTACCTCCAA 58.238 47.619 0.00 0.00 35.12 3.53
4726 8125 3.334691 CACGTCATTGTGTACCTCCAAT 58.665 45.455 0.00 0.00 35.12 3.16
4727 8126 3.125146 CACGTCATTGTGTACCTCCAATG 59.875 47.826 17.40 17.40 45.89 2.82
4728 8127 2.095853 CGTCATTGTGTACCTCCAATGC 59.904 50.000 18.16 14.09 44.76 3.56
4729 8128 2.423538 GTCATTGTGTACCTCCAATGCC 59.576 50.000 18.16 9.06 44.76 4.40
4730 8129 1.401552 CATTGTGTACCTCCAATGCCG 59.598 52.381 13.63 0.00 40.84 5.69
4731 8130 0.687920 TTGTGTACCTCCAATGCCGA 59.312 50.000 0.00 0.00 0.00 5.54
4732 8131 0.249120 TGTGTACCTCCAATGCCGAG 59.751 55.000 0.00 0.00 0.00 4.63
4736 8135 2.124570 CCTCCAATGCCGAGGGTG 60.125 66.667 0.00 0.00 42.85 4.61
4737 8136 2.669133 CCTCCAATGCCGAGGGTGA 61.669 63.158 0.00 0.00 42.85 4.02
4738 8137 1.528824 CTCCAATGCCGAGGGTGAT 59.471 57.895 0.00 0.00 0.00 3.06
4739 8138 0.758734 CTCCAATGCCGAGGGTGATA 59.241 55.000 0.00 0.00 0.00 2.15
4740 8139 0.468226 TCCAATGCCGAGGGTGATAC 59.532 55.000 0.00 0.00 0.00 2.24
4741 8140 0.180171 CCAATGCCGAGGGTGATACA 59.820 55.000 0.00 0.00 0.00 2.29
4742 8141 1.299541 CAATGCCGAGGGTGATACAC 58.700 55.000 0.00 0.00 0.00 2.90
4750 8149 4.110493 GGTGATACACCGCAGCTC 57.890 61.111 5.17 0.00 44.95 4.09
4751 8150 1.218047 GGTGATACACCGCAGCTCA 59.782 57.895 5.17 0.00 44.95 4.26
4752 8151 1.084370 GGTGATACACCGCAGCTCAC 61.084 60.000 5.17 2.31 44.95 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.570550 AGCCTATCGATGTACAACTCCTC 59.429 47.826 8.54 0.00 0.00 3.71
27 28 3.567397 AGCCTATCGATGTACAACTCCT 58.433 45.455 8.54 0.00 0.00 3.69
41 42 0.969894 ACCCGCACATCTAGCCTATC 59.030 55.000 0.00 0.00 0.00 2.08
97 98 8.312564 GGGAGTAGTAGTTAACAATCAAAGTCT 58.687 37.037 8.61 0.00 0.00 3.24
98 99 8.312564 AGGGAGTAGTAGTTAACAATCAAAGTC 58.687 37.037 8.61 1.01 0.00 3.01
99 100 8.203681 AGGGAGTAGTAGTTAACAATCAAAGT 57.796 34.615 8.61 0.00 0.00 2.66
133 134 8.488668 GGTCCTAAAAACACATTAGTCCCTATA 58.511 37.037 0.00 0.00 0.00 1.31
134 135 7.344134 GGTCCTAAAAACACATTAGTCCCTAT 58.656 38.462 0.00 0.00 0.00 2.57
135 136 6.574859 CGGTCCTAAAAACACATTAGTCCCTA 60.575 42.308 0.00 0.00 0.00 3.53
136 137 5.567430 GGTCCTAAAAACACATTAGTCCCT 58.433 41.667 0.00 0.00 0.00 4.20
137 138 4.393990 CGGTCCTAAAAACACATTAGTCCC 59.606 45.833 0.00 0.00 0.00 4.46
138 139 4.142752 GCGGTCCTAAAAACACATTAGTCC 60.143 45.833 0.00 0.00 0.00 3.85
139 140 4.142752 GGCGGTCCTAAAAACACATTAGTC 60.143 45.833 0.00 0.00 0.00 2.59
140 141 3.754850 GGCGGTCCTAAAAACACATTAGT 59.245 43.478 0.00 0.00 0.00 2.24
141 142 4.007659 AGGCGGTCCTAAAAACACATTAG 58.992 43.478 0.00 0.00 42.06 1.73
142 143 4.023726 AGGCGGTCCTAAAAACACATTA 57.976 40.909 0.00 0.00 42.06 1.90
143 144 2.871453 AGGCGGTCCTAAAAACACATT 58.129 42.857 0.00 0.00 42.06 2.71
144 145 2.579410 AGGCGGTCCTAAAAACACAT 57.421 45.000 0.00 0.00 42.06 3.21
145 146 2.351706 AAGGCGGTCCTAAAAACACA 57.648 45.000 0.00 0.00 43.40 3.72
146 147 2.619646 TCAAAGGCGGTCCTAAAAACAC 59.380 45.455 0.00 0.00 43.40 3.32
147 148 2.619646 GTCAAAGGCGGTCCTAAAAACA 59.380 45.455 0.00 0.00 43.40 2.83
148 149 2.882761 AGTCAAAGGCGGTCCTAAAAAC 59.117 45.455 0.00 0.00 43.40 2.43
149 150 3.217681 AGTCAAAGGCGGTCCTAAAAA 57.782 42.857 0.00 0.00 43.40 1.94
150 151 2.943036 AGTCAAAGGCGGTCCTAAAA 57.057 45.000 0.00 0.00 43.40 1.52
151 152 4.020039 TCAATAGTCAAAGGCGGTCCTAAA 60.020 41.667 0.00 0.00 43.40 1.85
152 153 3.516300 TCAATAGTCAAAGGCGGTCCTAA 59.484 43.478 0.00 0.00 43.40 2.69
153 154 3.101437 TCAATAGTCAAAGGCGGTCCTA 58.899 45.455 0.00 0.00 43.40 2.94
155 156 2.007608 GTCAATAGTCAAAGGCGGTCC 58.992 52.381 0.00 0.00 0.00 4.46
156 157 2.695359 TGTCAATAGTCAAAGGCGGTC 58.305 47.619 0.00 0.00 0.00 4.79
157 158 2.851263 TGTCAATAGTCAAAGGCGGT 57.149 45.000 0.00 0.00 0.00 5.68
158 159 3.334691 TCTTGTCAATAGTCAAAGGCGG 58.665 45.455 0.00 0.00 0.00 6.13
159 160 5.551760 AATCTTGTCAATAGTCAAAGGCG 57.448 39.130 0.00 0.00 0.00 5.52
172 173 9.045223 GCATGTCATGTACTATTAATCTTGTCA 57.955 33.333 14.26 0.00 0.00 3.58
173 174 9.045223 TGCATGTCATGTACTATTAATCTTGTC 57.955 33.333 14.26 0.00 0.00 3.18
174 175 8.830580 GTGCATGTCATGTACTATTAATCTTGT 58.169 33.333 22.47 0.00 41.79 3.16
175 176 8.829612 TGTGCATGTCATGTACTATTAATCTTG 58.170 33.333 27.47 0.00 44.74 3.02
176 177 8.962884 TGTGCATGTCATGTACTATTAATCTT 57.037 30.769 27.47 0.00 44.74 2.40
177 178 8.962884 TTGTGCATGTCATGTACTATTAATCT 57.037 30.769 27.47 0.00 44.74 2.40
178 179 9.603298 CATTGTGCATGTCATGTACTATTAATC 57.397 33.333 27.47 6.34 44.74 1.75
179 180 9.123902 ACATTGTGCATGTCATGTACTATTAAT 57.876 29.630 27.47 18.36 43.17 1.40
180 181 8.397148 CACATTGTGCATGTCATGTACTATTAA 58.603 33.333 27.47 17.22 43.17 1.40
181 182 7.768120 TCACATTGTGCATGTCATGTACTATTA 59.232 33.333 27.47 14.37 43.17 0.98
182 183 6.598850 TCACATTGTGCATGTCATGTACTATT 59.401 34.615 27.47 16.17 43.17 1.73
183 184 6.114767 TCACATTGTGCATGTCATGTACTAT 58.885 36.000 27.47 23.55 43.17 2.12
184 185 5.486526 TCACATTGTGCATGTCATGTACTA 58.513 37.500 27.47 22.59 43.17 1.82
185 186 4.325972 TCACATTGTGCATGTCATGTACT 58.674 39.130 27.47 11.55 43.17 2.73
186 187 4.683501 TCACATTGTGCATGTCATGTAC 57.316 40.909 22.84 22.84 43.17 2.90
187 188 5.702349 TTTCACATTGTGCATGTCATGTA 57.298 34.783 14.26 7.11 43.17 2.29
188 189 4.587584 TTTCACATTGTGCATGTCATGT 57.412 36.364 14.26 0.00 43.17 3.21
189 190 6.474819 AATTTTCACATTGTGCATGTCATG 57.525 33.333 12.04 8.56 43.17 3.07
191 192 9.518906 GATATAATTTTCACATTGTGCATGTCA 57.481 29.630 12.04 0.00 43.17 3.58
192 193 9.518906 TGATATAATTTTCACATTGTGCATGTC 57.481 29.630 12.04 6.55 43.17 3.06
221 222 2.210116 TCGTGTGTGAAAGGAGCTTTC 58.790 47.619 0.00 0.00 46.88 2.62
222 223 2.325583 TCGTGTGTGAAAGGAGCTTT 57.674 45.000 0.00 0.00 36.29 3.51
223 224 2.325583 TTCGTGTGTGAAAGGAGCTT 57.674 45.000 0.00 0.00 0.00 3.74
224 225 2.550830 ATTCGTGTGTGAAAGGAGCT 57.449 45.000 0.00 0.00 0.00 4.09
225 226 3.626028 AAATTCGTGTGTGAAAGGAGC 57.374 42.857 0.00 0.00 0.00 4.70
226 227 5.137403 CGTTAAATTCGTGTGTGAAAGGAG 58.863 41.667 0.00 0.00 0.00 3.69
227 228 4.024725 CCGTTAAATTCGTGTGTGAAAGGA 60.025 41.667 0.00 0.00 0.00 3.36
228 229 4.215965 CCGTTAAATTCGTGTGTGAAAGG 58.784 43.478 0.00 0.00 0.00 3.11
229 230 4.668837 CACCGTTAAATTCGTGTGTGAAAG 59.331 41.667 0.00 0.00 0.00 2.62
230 231 4.094590 ACACCGTTAAATTCGTGTGTGAAA 59.905 37.500 9.71 0.00 39.31 2.69
231 232 3.622163 ACACCGTTAAATTCGTGTGTGAA 59.378 39.130 9.71 0.00 39.31 3.18
232 233 3.196463 ACACCGTTAAATTCGTGTGTGA 58.804 40.909 9.71 0.00 39.31 3.58
233 234 3.284914 CACACCGTTAAATTCGTGTGTG 58.715 45.455 17.05 17.05 44.50 3.82
234 235 2.286536 GCACACCGTTAAATTCGTGTGT 60.287 45.455 17.54 12.66 40.37 3.72
235 236 2.032377 AGCACACCGTTAAATTCGTGTG 60.032 45.455 13.39 13.39 40.02 3.82
236 237 2.215196 AGCACACCGTTAAATTCGTGT 58.785 42.857 0.00 0.00 0.00 4.49
237 238 2.961522 AGCACACCGTTAAATTCGTG 57.038 45.000 0.00 0.00 0.00 4.35
238 239 3.065648 ACAAAGCACACCGTTAAATTCGT 59.934 39.130 0.00 0.00 0.00 3.85
239 240 3.420576 CACAAAGCACACCGTTAAATTCG 59.579 43.478 0.00 0.00 0.00 3.34
240 241 4.356289 ACACAAAGCACACCGTTAAATTC 58.644 39.130 0.00 0.00 0.00 2.17
241 242 4.379339 ACACAAAGCACACCGTTAAATT 57.621 36.364 0.00 0.00 0.00 1.82
242 243 5.066764 ACTTACACAAAGCACACCGTTAAAT 59.933 36.000 0.00 0.00 38.93 1.40
243 244 4.395542 ACTTACACAAAGCACACCGTTAAA 59.604 37.500 0.00 0.00 38.93 1.52
244 245 3.940221 ACTTACACAAAGCACACCGTTAA 59.060 39.130 0.00 0.00 38.93 2.01
245 246 3.533547 ACTTACACAAAGCACACCGTTA 58.466 40.909 0.00 0.00 38.93 3.18
246 247 2.361789 ACTTACACAAAGCACACCGTT 58.638 42.857 0.00 0.00 38.93 4.44
247 248 2.032680 ACTTACACAAAGCACACCGT 57.967 45.000 0.00 0.00 38.93 4.83
248 249 2.715268 CAACTTACACAAAGCACACCG 58.285 47.619 0.00 0.00 38.93 4.94
249 250 2.159310 TGCAACTTACACAAAGCACACC 60.159 45.455 0.00 0.00 38.93 4.16
250 251 3.143807 TGCAACTTACACAAAGCACAC 57.856 42.857 0.00 0.00 38.93 3.82
251 252 3.130164 ACATGCAACTTACACAAAGCACA 59.870 39.130 0.00 0.00 38.93 4.57
252 253 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
253 254 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
254 255 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
283 284 8.388103 GCTAACTTTGATCGAATACTAAAGCAA 58.612 33.333 0.00 0.00 32.97 3.91
284 285 7.011109 GGCTAACTTTGATCGAATACTAAAGCA 59.989 37.037 0.00 0.00 32.97 3.91
285 286 7.224949 AGGCTAACTTTGATCGAATACTAAAGC 59.775 37.037 0.00 0.97 32.97 3.51
286 287 8.649973 AGGCTAACTTTGATCGAATACTAAAG 57.350 34.615 0.00 0.00 35.18 1.85
287 288 7.434307 CGAGGCTAACTTTGATCGAATACTAAA 59.566 37.037 0.00 0.00 32.13 1.85
288 289 6.916387 CGAGGCTAACTTTGATCGAATACTAA 59.084 38.462 0.00 0.00 32.13 2.24
289 290 6.261603 TCGAGGCTAACTTTGATCGAATACTA 59.738 38.462 0.00 0.00 36.37 1.82
290 291 5.067413 TCGAGGCTAACTTTGATCGAATACT 59.933 40.000 0.00 0.00 36.37 2.12
291 292 5.279384 TCGAGGCTAACTTTGATCGAATAC 58.721 41.667 0.00 0.00 36.37 1.89
292 293 5.509716 TCGAGGCTAACTTTGATCGAATA 57.490 39.130 0.00 0.00 36.37 1.75
293 294 4.386867 TCGAGGCTAACTTTGATCGAAT 57.613 40.909 0.00 0.00 36.37 3.34
294 295 3.861276 TCGAGGCTAACTTTGATCGAA 57.139 42.857 0.00 0.00 36.37 3.71
295 296 3.861276 TTCGAGGCTAACTTTGATCGA 57.139 42.857 0.00 0.00 37.40 3.59
296 297 4.435651 GGTTTTCGAGGCTAACTTTGATCG 60.436 45.833 0.00 0.00 0.00 3.69
297 298 4.435651 CGGTTTTCGAGGCTAACTTTGATC 60.436 45.833 0.00 0.00 42.43 2.92
298 299 3.435671 CGGTTTTCGAGGCTAACTTTGAT 59.564 43.478 0.00 0.00 42.43 2.57
299 300 2.803956 CGGTTTTCGAGGCTAACTTTGA 59.196 45.455 0.00 0.00 42.43 2.69
300 301 2.664698 GCGGTTTTCGAGGCTAACTTTG 60.665 50.000 0.00 0.00 42.43 2.77
301 302 1.534163 GCGGTTTTCGAGGCTAACTTT 59.466 47.619 0.00 0.00 42.43 2.66
302 303 1.154197 GCGGTTTTCGAGGCTAACTT 58.846 50.000 0.00 0.00 42.43 2.66
303 304 0.034337 TGCGGTTTTCGAGGCTAACT 59.966 50.000 0.00 0.00 42.43 2.24
304 305 1.084289 ATGCGGTTTTCGAGGCTAAC 58.916 50.000 0.00 0.00 42.43 2.34
305 306 1.816074 AATGCGGTTTTCGAGGCTAA 58.184 45.000 0.00 0.00 42.43 3.09
306 307 2.546778 CTAATGCGGTTTTCGAGGCTA 58.453 47.619 0.00 0.00 42.43 3.93
307 308 1.369625 CTAATGCGGTTTTCGAGGCT 58.630 50.000 0.00 0.00 42.43 4.58
308 309 0.377203 CCTAATGCGGTTTTCGAGGC 59.623 55.000 0.00 0.00 42.43 4.70
309 310 0.377203 GCCTAATGCGGTTTTCGAGG 59.623 55.000 0.00 0.00 42.43 4.63
310 311 0.377203 GGCCTAATGCGGTTTTCGAG 59.623 55.000 0.00 0.00 42.61 4.04
311 312 1.027792 GGGCCTAATGCGGTTTTCGA 61.028 55.000 0.84 0.00 42.61 3.71
312 313 1.029947 AGGGCCTAATGCGGTTTTCG 61.030 55.000 2.82 0.00 42.61 3.46
313 314 2.047002 TAGGGCCTAATGCGGTTTTC 57.953 50.000 11.78 0.00 42.61 2.29
314 315 2.748209 ATAGGGCCTAATGCGGTTTT 57.252 45.000 18.91 0.00 42.61 2.43
315 316 4.781087 TCTATATAGGGCCTAATGCGGTTT 59.219 41.667 18.91 0.30 42.61 3.27
316 317 4.359105 TCTATATAGGGCCTAATGCGGTT 58.641 43.478 18.91 1.12 42.61 4.44
317 318 3.990369 TCTATATAGGGCCTAATGCGGT 58.010 45.455 18.91 1.94 42.61 5.68
318 319 4.262635 CCATCTATATAGGGCCTAATGCGG 60.263 50.000 18.91 8.18 42.61 5.69
319 320 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
320 321 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
321 322 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
322 323 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
323 324 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
324 325 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
325 326 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
326 327 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
327 328 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
328 329 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
329 330 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
332 333 9.086059 TCTTATACTCCCTCCTTCCATCTATAT 57.914 37.037 0.00 0.00 0.00 0.86
333 334 8.478214 TCTTATACTCCCTCCTTCCATCTATA 57.522 38.462 0.00 0.00 0.00 1.31
334 335 7.363759 TCTTATACTCCCTCCTTCCATCTAT 57.636 40.000 0.00 0.00 0.00 1.98
335 336 6.751510 GCTCTTATACTCCCTCCTTCCATCTA 60.752 46.154 0.00 0.00 0.00 1.98
336 337 5.650283 CTCTTATACTCCCTCCTTCCATCT 58.350 45.833 0.00 0.00 0.00 2.90
337 338 4.221924 GCTCTTATACTCCCTCCTTCCATC 59.778 50.000 0.00 0.00 0.00 3.51
338 339 4.164204 GCTCTTATACTCCCTCCTTCCAT 58.836 47.826 0.00 0.00 0.00 3.41
339 340 3.052109 TGCTCTTATACTCCCTCCTTCCA 60.052 47.826 0.00 0.00 0.00 3.53
340 341 3.577919 TGCTCTTATACTCCCTCCTTCC 58.422 50.000 0.00 0.00 0.00 3.46
341 342 4.835615 TCATGCTCTTATACTCCCTCCTTC 59.164 45.833 0.00 0.00 0.00 3.46
342 343 4.820775 TCATGCTCTTATACTCCCTCCTT 58.179 43.478 0.00 0.00 0.00 3.36
343 344 4.477536 TCATGCTCTTATACTCCCTCCT 57.522 45.455 0.00 0.00 0.00 3.69
344 345 5.753721 AATCATGCTCTTATACTCCCTCC 57.246 43.478 0.00 0.00 0.00 4.30
346 347 9.554053 ACTATTAATCATGCTCTTATACTCCCT 57.446 33.333 0.00 0.00 0.00 4.20
355 356 7.768120 GCTGGCTATACTATTAATCATGCTCTT 59.232 37.037 0.00 0.00 0.00 2.85
356 357 7.125507 AGCTGGCTATACTATTAATCATGCTCT 59.874 37.037 0.00 0.00 0.00 4.09
357 358 7.224362 CAGCTGGCTATACTATTAATCATGCTC 59.776 40.741 5.57 0.00 0.00 4.26
358 359 7.046652 CAGCTGGCTATACTATTAATCATGCT 58.953 38.462 5.57 0.00 0.00 3.79
359 360 6.238320 GCAGCTGGCTATACTATTAATCATGC 60.238 42.308 17.12 0.00 40.25 4.06
360 361 7.244166 GCAGCTGGCTATACTATTAATCATG 57.756 40.000 17.12 0.00 40.25 3.07
387 388 1.876156 GACATGGCACTGGCTTATAGC 59.124 52.381 3.97 0.00 41.46 2.97
388 389 3.198409 TGACATGGCACTGGCTTATAG 57.802 47.619 0.00 0.00 40.87 1.31
389 390 3.392285 AGATGACATGGCACTGGCTTATA 59.608 43.478 1.45 0.00 40.87 0.98
390 391 2.174210 AGATGACATGGCACTGGCTTAT 59.826 45.455 1.45 0.00 40.87 1.73
391 392 1.561076 AGATGACATGGCACTGGCTTA 59.439 47.619 1.45 0.00 40.87 3.09
392 393 0.330604 AGATGACATGGCACTGGCTT 59.669 50.000 1.45 0.00 40.87 4.35
393 394 1.134280 GTAGATGACATGGCACTGGCT 60.134 52.381 1.45 1.41 40.87 4.75
394 395 1.303309 GTAGATGACATGGCACTGGC 58.697 55.000 1.45 0.00 40.13 4.85
395 396 2.558378 CTGTAGATGACATGGCACTGG 58.442 52.381 1.45 0.00 37.45 4.00
396 397 1.938577 GCTGTAGATGACATGGCACTG 59.061 52.381 1.45 0.00 37.45 3.66
397 398 1.134280 GGCTGTAGATGACATGGCACT 60.134 52.381 1.45 6.11 37.45 4.40
398 399 1.303309 GGCTGTAGATGACATGGCAC 58.697 55.000 1.45 0.00 37.45 5.01
399 400 0.181114 GGGCTGTAGATGACATGGCA 59.819 55.000 2.18 2.18 37.45 4.92
400 401 0.181114 TGGGCTGTAGATGACATGGC 59.819 55.000 0.00 0.00 37.45 4.40
401 402 2.371179 AGATGGGCTGTAGATGACATGG 59.629 50.000 0.00 0.00 37.45 3.66
402 403 3.766068 AGATGGGCTGTAGATGACATG 57.234 47.619 0.00 0.00 37.45 3.21
403 404 6.728164 ACTATAAGATGGGCTGTAGATGACAT 59.272 38.462 0.00 0.00 37.45 3.06
404 405 6.077993 ACTATAAGATGGGCTGTAGATGACA 58.922 40.000 0.00 0.00 36.35 3.58
405 406 6.209589 TGACTATAAGATGGGCTGTAGATGAC 59.790 42.308 0.00 0.00 0.00 3.06
406 407 6.314917 TGACTATAAGATGGGCTGTAGATGA 58.685 40.000 0.00 0.00 0.00 2.92
407 408 6.596309 TGACTATAAGATGGGCTGTAGATG 57.404 41.667 0.00 0.00 0.00 2.90
408 409 6.554982 TGTTGACTATAAGATGGGCTGTAGAT 59.445 38.462 0.00 0.00 0.00 1.98
409 410 5.897250 TGTTGACTATAAGATGGGCTGTAGA 59.103 40.000 0.00 0.00 0.00 2.59
410 411 6.161855 TGTTGACTATAAGATGGGCTGTAG 57.838 41.667 0.00 0.00 0.00 2.74
411 412 6.099701 ACATGTTGACTATAAGATGGGCTGTA 59.900 38.462 0.00 0.00 36.09 2.74
412 413 5.104360 ACATGTTGACTATAAGATGGGCTGT 60.104 40.000 0.00 0.00 36.09 4.40
413 414 5.371526 ACATGTTGACTATAAGATGGGCTG 58.628 41.667 0.00 0.00 36.09 4.85
414 415 5.636903 ACATGTTGACTATAAGATGGGCT 57.363 39.130 0.00 0.00 36.09 5.19
415 416 9.672673 ATTATACATGTTGACTATAAGATGGGC 57.327 33.333 2.30 0.00 36.09 5.36
466 467 5.544176 TGAAAGGTGGGCCACATAATAAAAA 59.456 36.000 35.69 10.35 35.86 1.94
467 468 5.087323 TGAAAGGTGGGCCACATAATAAAA 58.913 37.500 35.69 11.39 35.86 1.52
468 469 4.678256 TGAAAGGTGGGCCACATAATAAA 58.322 39.130 35.69 13.51 35.86 1.40
469 470 4.323569 TGAAAGGTGGGCCACATAATAA 57.676 40.909 35.69 13.98 35.86 1.40
470 471 4.534647 ATGAAAGGTGGGCCACATAATA 57.465 40.909 35.69 19.38 35.86 0.98
471 472 2.917713 TGAAAGGTGGGCCACATAAT 57.082 45.000 35.69 22.42 35.86 1.28
472 473 2.917713 ATGAAAGGTGGGCCACATAA 57.082 45.000 35.69 19.62 35.86 1.90
473 474 2.311542 AGAATGAAAGGTGGGCCACATA 59.688 45.455 35.69 16.77 35.86 2.29
474 475 1.077663 AGAATGAAAGGTGGGCCACAT 59.922 47.619 35.69 28.70 35.86 3.21
475 476 0.482446 AGAATGAAAGGTGGGCCACA 59.518 50.000 35.69 17.39 35.86 4.17
476 477 1.632589 AAGAATGAAAGGTGGGCCAC 58.367 50.000 28.69 28.69 37.19 5.01
477 478 2.109128 TGTAAGAATGAAAGGTGGGCCA 59.891 45.455 0.00 0.00 37.19 5.36
478 479 2.802719 TGTAAGAATGAAAGGTGGGCC 58.197 47.619 0.00 0.00 0.00 5.80
479 480 4.864704 TTTGTAAGAATGAAAGGTGGGC 57.135 40.909 0.00 0.00 0.00 5.36
480 481 5.639082 GCATTTTGTAAGAATGAAAGGTGGG 59.361 40.000 1.32 0.00 36.78 4.61
481 482 5.639082 GGCATTTTGTAAGAATGAAAGGTGG 59.361 40.000 1.32 0.00 36.78 4.61
482 483 6.458210 AGGCATTTTGTAAGAATGAAAGGTG 58.542 36.000 1.32 0.00 36.78 4.00
483 484 6.670695 AGGCATTTTGTAAGAATGAAAGGT 57.329 33.333 1.32 0.00 36.78 3.50
484 485 7.122650 TCCTAGGCATTTTGTAAGAATGAAAGG 59.877 37.037 2.96 4.38 36.78 3.11
485 486 8.055279 TCCTAGGCATTTTGTAAGAATGAAAG 57.945 34.615 2.96 0.00 36.78 2.62
486 487 7.362920 GCTCCTAGGCATTTTGTAAGAATGAAA 60.363 37.037 2.96 0.00 36.78 2.69
487 488 6.095440 GCTCCTAGGCATTTTGTAAGAATGAA 59.905 38.462 2.96 0.00 36.78 2.57
488 489 5.590259 GCTCCTAGGCATTTTGTAAGAATGA 59.410 40.000 2.96 0.00 36.78 2.57
489 490 5.357878 TGCTCCTAGGCATTTTGTAAGAATG 59.642 40.000 2.96 0.00 37.29 2.67
490 491 5.358160 GTGCTCCTAGGCATTTTGTAAGAAT 59.642 40.000 2.96 0.00 44.34 2.40
491 492 4.700213 GTGCTCCTAGGCATTTTGTAAGAA 59.300 41.667 2.96 0.00 44.34 2.52
492 493 4.261801 GTGCTCCTAGGCATTTTGTAAGA 58.738 43.478 2.96 0.00 44.34 2.10
493 494 3.063997 CGTGCTCCTAGGCATTTTGTAAG 59.936 47.826 2.96 0.00 44.34 2.34
494 495 3.006940 CGTGCTCCTAGGCATTTTGTAA 58.993 45.455 2.96 0.00 44.34 2.41
495 496 2.027561 ACGTGCTCCTAGGCATTTTGTA 60.028 45.455 2.96 0.00 44.34 2.41
496 497 1.271379 ACGTGCTCCTAGGCATTTTGT 60.271 47.619 2.96 0.00 44.34 2.83
497 498 1.453155 ACGTGCTCCTAGGCATTTTG 58.547 50.000 2.96 0.00 44.34 2.44
498 499 2.236395 AGTACGTGCTCCTAGGCATTTT 59.764 45.455 2.96 0.00 44.34 1.82
499 500 1.831736 AGTACGTGCTCCTAGGCATTT 59.168 47.619 2.96 0.00 44.34 2.32
500 501 1.486211 AGTACGTGCTCCTAGGCATT 58.514 50.000 2.96 0.00 44.34 3.56
501 502 2.158652 TCTAGTACGTGCTCCTAGGCAT 60.159 50.000 10.21 0.00 44.34 4.40
502 503 1.211212 TCTAGTACGTGCTCCTAGGCA 59.789 52.381 10.21 0.00 40.15 4.75
503 504 1.874872 CTCTAGTACGTGCTCCTAGGC 59.125 57.143 10.21 0.00 31.21 3.93
504 505 1.874872 GCTCTAGTACGTGCTCCTAGG 59.125 57.143 10.21 0.82 31.21 3.02
505 506 2.546368 CAGCTCTAGTACGTGCTCCTAG 59.454 54.545 10.21 7.40 31.96 3.02
506 507 2.562635 CAGCTCTAGTACGTGCTCCTA 58.437 52.381 10.21 0.00 31.96 2.94
507 508 1.384525 CAGCTCTAGTACGTGCTCCT 58.615 55.000 10.21 0.00 31.96 3.69
508 509 0.382515 CCAGCTCTAGTACGTGCTCC 59.617 60.000 10.21 0.00 31.96 4.70
509 510 0.248702 GCCAGCTCTAGTACGTGCTC 60.249 60.000 10.21 0.00 31.96 4.26
510 511 0.681564 AGCCAGCTCTAGTACGTGCT 60.682 55.000 11.87 11.87 34.37 4.40
511 512 0.248702 GAGCCAGCTCTAGTACGTGC 60.249 60.000 12.42 0.00 39.80 5.34
512 513 3.928343 GAGCCAGCTCTAGTACGTG 57.072 57.895 12.42 0.00 39.80 4.49
521 522 0.244994 TCTTCGTGAAGAGCCAGCTC 59.755 55.000 11.78 11.78 42.06 4.09
522 523 2.355946 TCTTCGTGAAGAGCCAGCT 58.644 52.632 8.19 0.00 42.06 4.24
523 524 4.996976 TCTTCGTGAAGAGCCAGC 57.003 55.556 8.19 0.00 42.06 4.85
529 530 0.391597 AAACGGGCTCTTCGTGAAGA 59.608 50.000 11.54 11.54 44.47 2.87
530 531 1.725164 GTAAACGGGCTCTTCGTGAAG 59.275 52.381 3.17 3.17 40.96 3.02
531 532 1.606224 GGTAAACGGGCTCTTCGTGAA 60.606 52.381 0.00 0.00 40.96 3.18
532 533 0.037975 GGTAAACGGGCTCTTCGTGA 60.038 55.000 0.00 0.00 40.96 4.35
533 534 0.037605 AGGTAAACGGGCTCTTCGTG 60.038 55.000 0.00 0.00 40.96 4.35
534 535 0.683412 AAGGTAAACGGGCTCTTCGT 59.317 50.000 0.00 0.00 43.14 3.85
535 536 1.067071 AGAAGGTAAACGGGCTCTTCG 60.067 52.381 0.00 0.00 38.89 3.79
536 537 2.234168 AGAGAAGGTAAACGGGCTCTTC 59.766 50.000 0.00 0.00 35.41 2.87
537 538 2.234168 GAGAGAAGGTAAACGGGCTCTT 59.766 50.000 0.00 0.00 33.26 2.85
538 539 1.826096 GAGAGAAGGTAAACGGGCTCT 59.174 52.381 0.00 0.00 35.59 4.09
539 540 1.826096 AGAGAGAAGGTAAACGGGCTC 59.174 52.381 0.00 0.00 0.00 4.70
540 541 1.826096 GAGAGAGAAGGTAAACGGGCT 59.174 52.381 0.00 0.00 0.00 5.19
541 542 1.134759 GGAGAGAGAAGGTAAACGGGC 60.135 57.143 0.00 0.00 0.00 6.13
542 543 2.458620 AGGAGAGAGAAGGTAAACGGG 58.541 52.381 0.00 0.00 0.00 5.28
543 544 4.538746 AAAGGAGAGAGAAGGTAAACGG 57.461 45.455 0.00 0.00 0.00 4.44
544 545 5.785243 AGAAAAGGAGAGAGAAGGTAAACG 58.215 41.667 0.00 0.00 0.00 3.60
545 546 6.999950 AGAGAAAAGGAGAGAGAAGGTAAAC 58.000 40.000 0.00 0.00 0.00 2.01
546 547 7.619512 AAGAGAAAAGGAGAGAGAAGGTAAA 57.380 36.000 0.00 0.00 0.00 2.01
547 548 7.256368 GGAAAGAGAAAAGGAGAGAGAAGGTAA 60.256 40.741 0.00 0.00 0.00 2.85
548 549 6.211785 GGAAAGAGAAAAGGAGAGAGAAGGTA 59.788 42.308 0.00 0.00 0.00 3.08
549 550 5.012664 GGAAAGAGAAAAGGAGAGAGAAGGT 59.987 44.000 0.00 0.00 0.00 3.50
550 551 5.248248 AGGAAAGAGAAAAGGAGAGAGAAGG 59.752 44.000 0.00 0.00 0.00 3.46
551 552 6.358974 AGGAAAGAGAAAAGGAGAGAGAAG 57.641 41.667 0.00 0.00 0.00 2.85
552 553 5.247337 GGAGGAAAGAGAAAAGGAGAGAGAA 59.753 44.000 0.00 0.00 0.00 2.87
553 554 4.775253 GGAGGAAAGAGAAAAGGAGAGAGA 59.225 45.833 0.00 0.00 0.00 3.10
554 555 4.530161 TGGAGGAAAGAGAAAAGGAGAGAG 59.470 45.833 0.00 0.00 0.00 3.20
555 556 4.493618 TGGAGGAAAGAGAAAAGGAGAGA 58.506 43.478 0.00 0.00 0.00 3.10
556 557 4.899352 TGGAGGAAAGAGAAAAGGAGAG 57.101 45.455 0.00 0.00 0.00 3.20
557 558 4.660771 AGTTGGAGGAAAGAGAAAAGGAGA 59.339 41.667 0.00 0.00 0.00 3.71
558 559 4.979335 AGTTGGAGGAAAGAGAAAAGGAG 58.021 43.478 0.00 0.00 0.00 3.69
559 560 6.509523 TTAGTTGGAGGAAAGAGAAAAGGA 57.490 37.500 0.00 0.00 0.00 3.36
560 561 6.546034 TGTTTAGTTGGAGGAAAGAGAAAAGG 59.454 38.462 0.00 0.00 0.00 3.11
561 562 7.499232 TCTGTTTAGTTGGAGGAAAGAGAAAAG 59.501 37.037 0.00 0.00 31.67 2.27
562 563 7.343357 TCTGTTTAGTTGGAGGAAAGAGAAAA 58.657 34.615 0.00 0.00 31.67 2.29
563 564 6.895782 TCTGTTTAGTTGGAGGAAAGAGAAA 58.104 36.000 0.00 0.00 31.67 2.52
564 565 6.494666 TCTGTTTAGTTGGAGGAAAGAGAA 57.505 37.500 0.00 0.00 31.67 2.87
565 566 6.494666 TTCTGTTTAGTTGGAGGAAAGAGA 57.505 37.500 0.00 0.00 32.46 3.10
566 567 7.751768 ATTTCTGTTTAGTTGGAGGAAAGAG 57.248 36.000 0.00 0.00 0.00 2.85
610 611 9.297037 AGTATAATAAAAATGAATTAGCGGGCT 57.703 29.630 0.00 0.00 0.00 5.19
611 612 9.908152 AAGTATAATAAAAATGAATTAGCGGGC 57.092 29.630 0.00 0.00 0.00 6.13
636 637 4.022935 CCTTTGCATCACTTGTTAGAGCAA 60.023 41.667 0.00 0.00 38.56 3.91
637 638 3.503363 CCTTTGCATCACTTGTTAGAGCA 59.497 43.478 0.00 0.00 0.00 4.26
638 639 3.503748 ACCTTTGCATCACTTGTTAGAGC 59.496 43.478 0.00 0.00 0.00 4.09
639 640 4.756642 TCACCTTTGCATCACTTGTTAGAG 59.243 41.667 0.00 0.00 0.00 2.43
640 641 4.515191 GTCACCTTTGCATCACTTGTTAGA 59.485 41.667 0.00 0.00 0.00 2.10
641 642 4.611355 CGTCACCTTTGCATCACTTGTTAG 60.611 45.833 0.00 0.00 0.00 2.34
642 643 3.249799 CGTCACCTTTGCATCACTTGTTA 59.750 43.478 0.00 0.00 0.00 2.41
643 644 2.033299 CGTCACCTTTGCATCACTTGTT 59.967 45.455 0.00 0.00 0.00 2.83
646 647 1.603802 CACGTCACCTTTGCATCACTT 59.396 47.619 0.00 0.00 0.00 3.16
665 666 3.785859 GCTGGACCGGATCAGGCA 61.786 66.667 22.89 1.97 33.69 4.75
666 667 3.036429 AAGCTGGACCGGATCAGGC 62.036 63.158 22.89 16.93 33.69 4.85
668 669 0.460987 GTCAAGCTGGACCGGATCAG 60.461 60.000 9.46 16.22 0.00 2.90
669 670 1.596934 GTCAAGCTGGACCGGATCA 59.403 57.895 9.46 4.69 0.00 2.92
678 679 0.179073 CCTACATCCGGTCAAGCTGG 60.179 60.000 0.00 0.00 45.18 4.85
680 681 1.414181 CATCCTACATCCGGTCAAGCT 59.586 52.381 0.00 0.00 0.00 3.74
682 683 3.321968 TGATCATCCTACATCCGGTCAAG 59.678 47.826 0.00 0.00 0.00 3.02
683 684 3.304829 TGATCATCCTACATCCGGTCAA 58.695 45.455 0.00 0.00 0.00 3.18
684 685 2.957474 TGATCATCCTACATCCGGTCA 58.043 47.619 0.00 0.00 0.00 4.02
685 686 3.766591 AGATGATCATCCTACATCCGGTC 59.233 47.826 28.23 4.19 40.55 4.79
687 688 4.502016 CAAGATGATCATCCTACATCCGG 58.498 47.826 28.23 0.00 40.55 5.14
688 689 3.931468 GCAAGATGATCATCCTACATCCG 59.069 47.826 28.23 11.49 40.55 4.18
689 690 4.903054 TGCAAGATGATCATCCTACATCC 58.097 43.478 28.23 12.68 40.55 3.51
690 691 8.557592 TTATTGCAAGATGATCATCCTACATC 57.442 34.615 28.23 14.10 38.58 3.06
692 693 8.750515 TTTTATTGCAAGATGATCATCCTACA 57.249 30.769 28.23 20.89 38.58 2.74
694 695 9.412460 ACTTTTTATTGCAAGATGATCATCCTA 57.588 29.630 28.23 13.08 38.58 2.94
696 697 9.455847 GTACTTTTTATTGCAAGATGATCATCC 57.544 33.333 28.23 15.86 38.58 3.51
737 1205 0.526211 GGATGGTTCCTTGGCGAAAC 59.474 55.000 0.00 0.00 39.14 2.78
738 1206 0.958382 CGGATGGTTCCTTGGCGAAA 60.958 55.000 0.00 0.00 40.17 3.46
796 1276 6.542370 GCCAGAATATTGACAGCCTTAGTTAA 59.458 38.462 0.00 0.00 0.00 2.01
805 1285 2.615912 GTGGAGCCAGAATATTGACAGC 59.384 50.000 0.00 0.00 0.00 4.40
840 1320 2.159517 GCTTTGTAAGATTGGTCGGCTG 60.160 50.000 0.00 0.00 0.00 4.85
848 1328 5.746245 TGTTCGTTTTGGCTTTGTAAGATTG 59.254 36.000 0.00 0.00 0.00 2.67
1203 1683 3.121934 TGCAAACCACAGCAGCAG 58.878 55.556 0.00 0.00 35.51 4.24
1332 1812 5.120830 GCATACATAAATTACGCCCAGAGAG 59.879 44.000 0.00 0.00 0.00 3.20
1400 1888 1.757699 GAGCCCTAACTAGTGGACCAG 59.242 57.143 0.00 0.00 0.00 4.00
1461 1949 8.107095 AGTTAGCCCATAACATTTAAGTTCAGA 58.893 33.333 1.07 0.00 45.34 3.27
1463 1951 8.644374 AAGTTAGCCCATAACATTTAAGTTCA 57.356 30.769 1.07 0.00 45.34 3.18
1471 1959 5.566627 GCACACAAAGTTAGCCCATAACATT 60.567 40.000 1.07 0.00 45.34 2.71
1533 2021 8.532977 ACACAAAGCAAGCGAAATAATTTTAT 57.467 26.923 0.00 0.00 0.00 1.40
1619 2110 4.902443 TTCATAGCTAGAGACTTCACCG 57.098 45.455 0.00 0.00 0.00 4.94
1712 2218 4.561938 CCATCACAATTTCACAGCCACAAT 60.562 41.667 0.00 0.00 0.00 2.71
1773 2279 7.392953 TGGATCATATAAGTCACACAAAGCAAA 59.607 33.333 0.00 0.00 0.00 3.68
1774 2280 6.883756 TGGATCATATAAGTCACACAAAGCAA 59.116 34.615 0.00 0.00 0.00 3.91
1809 2315 9.384764 GTAGTAATTTTCTGAAATACAGCCTCT 57.615 33.333 13.46 4.94 45.38 3.69
1925 2431 3.434637 GCGCATAAACTACAAATGGTGG 58.565 45.455 0.30 0.00 0.00 4.61
2033 2539 9.918630 AAAAATATTCATGTCAAGGACTCTTTG 57.081 29.630 0.00 0.00 33.15 2.77
2182 2688 8.199449 TCTTCCATCCTTGAAAAATATTCATGC 58.801 33.333 0.00 0.00 0.00 4.06
2222 2728 9.839185 AAGGGTTATATATCTAGAGCCAACTAA 57.161 33.333 0.00 0.00 0.00 2.24
2318 3002 6.889301 TCCATCCTTGAGAAATATTCATGC 57.111 37.500 0.00 0.00 0.00 4.06
2511 3195 8.021396 CGAGAACCAGTAAAAAGGGAATAAAAG 58.979 37.037 0.00 0.00 0.00 2.27
2630 3314 7.625469 AGGTAAGATTAAGCTGCTCTTAAGTT 58.375 34.615 1.00 12.32 46.84 2.66
2703 3387 5.640189 TGACTAGTAGAACCAGTAGCAAC 57.360 43.478 3.59 0.00 0.00 4.17
2804 3489 4.512944 TGCTGAACTCAATCAGTCACTTTC 59.487 41.667 6.22 0.00 46.85 2.62
2864 3550 4.637534 AGATGGAATTCTGATTTGGTGTCG 59.362 41.667 5.23 0.00 0.00 4.35
2912 3598 4.986659 GCATGACCAAATATTCCTTGCATC 59.013 41.667 0.00 0.00 0.00 3.91
2996 3691 4.035441 GGCCACTTACAAAACACGTTAAGA 59.965 41.667 0.00 0.00 0.00 2.10
3006 3701 2.335316 ACGACTGGCCACTTACAAAA 57.665 45.000 0.00 0.00 0.00 2.44
3069 3764 3.801307 TTGGGGAGTTCCTAAAGGTTC 57.199 47.619 0.00 0.00 32.74 3.62
3128 3823 8.147244 ACACCCTCTGTAACTAAATGTAAGAT 57.853 34.615 0.00 0.00 0.00 2.40
3531 4229 4.158394 GCTCAAATGCCCAGTAATGAGAAA 59.842 41.667 4.87 0.00 37.14 2.52
3532 4230 3.696051 GCTCAAATGCCCAGTAATGAGAA 59.304 43.478 4.87 0.00 37.14 2.87
3718 4417 2.964978 GCGCAAGGAAGCCAATGT 59.035 55.556 0.30 0.00 38.28 2.71
3826 4525 3.548668 CGACGAGTGTTACACAGAAAACA 59.451 43.478 18.19 0.00 36.74 2.83
3847 4546 2.353376 CAAAGTGTTGCGGCACCG 60.353 61.111 0.05 4.30 40.04 4.94
4025 7102 4.517075 TGCAACAACCGACATAATTCTTGA 59.483 37.500 0.00 0.00 0.00 3.02
4079 7156 0.940519 CGTGGCCACATGCAAACTTG 60.941 55.000 34.16 11.04 43.89 3.16
4095 7172 1.781025 TTTCAACGCTCTTGCCCGTG 61.781 55.000 0.00 0.00 37.79 4.94
4132 7210 0.762461 CAACCACCCCAACCCATGTT 60.762 55.000 0.00 0.00 34.14 2.71
4149 7227 0.772124 AGCCCCCTCTCTCCAAACAA 60.772 55.000 0.00 0.00 0.00 2.83
4150 7228 0.772124 AAGCCCCCTCTCTCCAAACA 60.772 55.000 0.00 0.00 0.00 2.83
4160 7238 5.112129 TCTCTAACAAAATAAGCCCCCTC 57.888 43.478 0.00 0.00 0.00 4.30
4165 7243 7.483307 TGAATGCATCTCTAACAAAATAAGCC 58.517 34.615 0.00 0.00 0.00 4.35
4211 7289 2.759535 GGTAGAAGTCCTAGACACACCC 59.240 54.545 0.00 0.00 34.60 4.61
4212 7290 3.444388 CAGGTAGAAGTCCTAGACACACC 59.556 52.174 0.00 0.00 34.60 4.16
4213 7291 4.333690 TCAGGTAGAAGTCCTAGACACAC 58.666 47.826 0.00 0.00 34.60 3.82
4214 7292 4.652679 TCAGGTAGAAGTCCTAGACACA 57.347 45.455 0.00 0.00 34.60 3.72
4216 7294 5.194432 GACATCAGGTAGAAGTCCTAGACA 58.806 45.833 0.00 0.00 38.66 3.41
4217 7295 5.761165 GACATCAGGTAGAAGTCCTAGAC 57.239 47.826 0.00 0.00 38.66 2.59
4223 7301 5.361285 ACATAGTGGACATCAGGTAGAAGTC 59.639 44.000 0.00 0.00 42.68 3.01
4224 7302 5.273208 ACATAGTGGACATCAGGTAGAAGT 58.727 41.667 0.00 0.00 0.00 3.01
4226 7304 6.013725 ACAAACATAGTGGACATCAGGTAGAA 60.014 38.462 0.00 0.00 0.00 2.10
4227 7305 5.483937 ACAAACATAGTGGACATCAGGTAGA 59.516 40.000 0.00 0.00 0.00 2.59
4228 7306 5.582269 CACAAACATAGTGGACATCAGGTAG 59.418 44.000 0.00 0.00 33.43 3.18
4230 7308 4.326826 CACAAACATAGTGGACATCAGGT 58.673 43.478 0.00 0.00 33.43 4.00
4231 7309 3.127548 GCACAAACATAGTGGACATCAGG 59.872 47.826 0.00 0.00 37.46 3.86
4232 7310 4.005650 AGCACAAACATAGTGGACATCAG 58.994 43.478 0.00 0.00 37.46 2.90
4233 7311 4.019792 AGCACAAACATAGTGGACATCA 57.980 40.909 0.00 0.00 37.46 3.07
4234 7312 5.376854 AAAGCACAAACATAGTGGACATC 57.623 39.130 0.00 0.00 37.46 3.06
4235 7313 5.789643 AAAAGCACAAACATAGTGGACAT 57.210 34.783 0.00 0.00 37.46 3.06
4236 7314 5.590530 AAAAAGCACAAACATAGTGGACA 57.409 34.783 0.00 0.00 37.46 4.02
4260 7338 7.104939 AGCTCCAATAAATAATGCAGCAAAAA 58.895 30.769 0.00 0.00 0.00 1.94
4261 7339 6.642430 AGCTCCAATAAATAATGCAGCAAAA 58.358 32.000 0.00 0.00 0.00 2.44
4262 7340 6.224665 AGCTCCAATAAATAATGCAGCAAA 57.775 33.333 0.00 0.00 0.00 3.68
4266 7344 8.790718 ACATCTAAGCTCCAATAAATAATGCAG 58.209 33.333 0.00 0.00 0.00 4.41
4267 7345 8.570488 CACATCTAAGCTCCAATAAATAATGCA 58.430 33.333 0.00 0.00 0.00 3.96
4268 7346 8.025445 CCACATCTAAGCTCCAATAAATAATGC 58.975 37.037 0.00 0.00 0.00 3.56
4270 7348 7.671398 CCCCACATCTAAGCTCCAATAAATAAT 59.329 37.037 0.00 0.00 0.00 1.28
4271 7349 7.004086 CCCCACATCTAAGCTCCAATAAATAA 58.996 38.462 0.00 0.00 0.00 1.40
4272 7350 6.331572 TCCCCACATCTAAGCTCCAATAAATA 59.668 38.462 0.00 0.00 0.00 1.40
4274 7352 4.476846 TCCCCACATCTAAGCTCCAATAAA 59.523 41.667 0.00 0.00 0.00 1.40
4275 7353 4.044308 TCCCCACATCTAAGCTCCAATAA 58.956 43.478 0.00 0.00 0.00 1.40
4276 7354 3.664320 TCCCCACATCTAAGCTCCAATA 58.336 45.455 0.00 0.00 0.00 1.90
4277 7355 2.492025 TCCCCACATCTAAGCTCCAAT 58.508 47.619 0.00 0.00 0.00 3.16
4278 7356 1.965414 TCCCCACATCTAAGCTCCAA 58.035 50.000 0.00 0.00 0.00 3.53
4279 7357 1.965414 TTCCCCACATCTAAGCTCCA 58.035 50.000 0.00 0.00 0.00 3.86
4280 7358 3.366052 TTTTCCCCACATCTAAGCTCC 57.634 47.619 0.00 0.00 0.00 4.70
4281 7359 7.454225 AGTATATTTTCCCCACATCTAAGCTC 58.546 38.462 0.00 0.00 0.00 4.09
4282 7360 7.394144 AGTATATTTTCCCCACATCTAAGCT 57.606 36.000 0.00 0.00 0.00 3.74
4283 7361 9.220767 CTAAGTATATTTTCCCCACATCTAAGC 57.779 37.037 0.00 0.00 0.00 3.09
4287 7365 9.170890 TCATCTAAGTATATTTTCCCCACATCT 57.829 33.333 0.00 0.00 0.00 2.90
4291 7369 9.367444 CGTATCATCTAAGTATATTTTCCCCAC 57.633 37.037 0.00 0.00 0.00 4.61
4292 7370 8.537016 CCGTATCATCTAAGTATATTTTCCCCA 58.463 37.037 0.00 0.00 0.00 4.96
4293 7371 8.537858 ACCGTATCATCTAAGTATATTTTCCCC 58.462 37.037 0.00 0.00 0.00 4.81
4304 7382 9.742144 AAGTCTATATCACCGTATCATCTAAGT 57.258 33.333 0.00 0.00 0.00 2.24
4307 7385 8.880750 CGAAAGTCTATATCACCGTATCATCTA 58.119 37.037 0.00 0.00 0.00 1.98
4308 7386 7.148222 CCGAAAGTCTATATCACCGTATCATCT 60.148 40.741 0.00 0.00 0.00 2.90
4309 7387 6.967767 CCGAAAGTCTATATCACCGTATCATC 59.032 42.308 0.00 0.00 0.00 2.92
4310 7388 6.127703 CCCGAAAGTCTATATCACCGTATCAT 60.128 42.308 0.00 0.00 0.00 2.45
4311 7389 5.182570 CCCGAAAGTCTATATCACCGTATCA 59.817 44.000 0.00 0.00 0.00 2.15
4312 7390 5.413833 TCCCGAAAGTCTATATCACCGTATC 59.586 44.000 0.00 0.00 0.00 2.24
4313 7391 5.319453 TCCCGAAAGTCTATATCACCGTAT 58.681 41.667 0.00 0.00 0.00 3.06
4314 7392 4.717877 TCCCGAAAGTCTATATCACCGTA 58.282 43.478 0.00 0.00 0.00 4.02
4316 7394 4.296690 GTTCCCGAAAGTCTATATCACCG 58.703 47.826 0.00 0.00 0.00 4.94
4333 7411 1.396653 TCTAAGATCCGACGGTTCCC 58.603 55.000 19.06 5.59 0.00 3.97
4334 7412 2.030096 GGATCTAAGATCCGACGGTTCC 60.030 54.545 19.06 7.85 0.00 3.62
4338 7416 1.542030 CCTGGATCTAAGATCCGACGG 59.458 57.143 7.84 7.84 41.03 4.79
4339 7417 1.542030 CCCTGGATCTAAGATCCGACG 59.458 57.143 0.00 0.00 41.03 5.12
4340 7418 1.896465 CCCCTGGATCTAAGATCCGAC 59.104 57.143 0.00 0.00 41.03 4.79
4341 7419 1.503784 ACCCCTGGATCTAAGATCCGA 59.496 52.381 0.00 0.00 41.03 4.55
4342 7420 2.016905 ACCCCTGGATCTAAGATCCG 57.983 55.000 0.00 0.00 41.03 4.18
4343 7421 2.224646 GCAACCCCTGGATCTAAGATCC 60.225 54.545 0.00 0.00 38.66 3.36
4346 7424 2.270434 AGCAACCCCTGGATCTAAGA 57.730 50.000 0.00 0.00 0.00 2.10
4347 7425 2.370189 CCTAGCAACCCCTGGATCTAAG 59.630 54.545 0.00 0.00 0.00 2.18
4348 7426 2.022428 TCCTAGCAACCCCTGGATCTAA 60.022 50.000 0.00 0.00 0.00 2.10
4349 7427 1.578703 TCCTAGCAACCCCTGGATCTA 59.421 52.381 0.00 0.00 0.00 1.98
4350 7428 0.343372 TCCTAGCAACCCCTGGATCT 59.657 55.000 0.00 0.00 0.00 2.75
4352 7430 1.348775 GCTCCTAGCAACCCCTGGAT 61.349 60.000 0.00 0.00 41.89 3.41
4353 7431 1.995626 GCTCCTAGCAACCCCTGGA 60.996 63.158 0.00 0.00 41.89 3.86
4354 7432 1.977293 GAGCTCCTAGCAACCCCTGG 61.977 65.000 0.87 0.00 45.56 4.45
4355 7433 1.267574 TGAGCTCCTAGCAACCCCTG 61.268 60.000 12.15 0.00 45.56 4.45
4356 7434 1.081092 TGAGCTCCTAGCAACCCCT 59.919 57.895 12.15 0.00 45.56 4.79
4357 7435 1.222113 GTGAGCTCCTAGCAACCCC 59.778 63.158 12.15 0.00 45.56 4.95
4358 7436 0.324943 TTGTGAGCTCCTAGCAACCC 59.675 55.000 12.15 0.00 45.56 4.11
4359 7437 1.807142 GTTTGTGAGCTCCTAGCAACC 59.193 52.381 12.15 0.62 45.56 3.77
4361 7439 3.492102 AAGTTTGTGAGCTCCTAGCAA 57.508 42.857 12.15 8.48 45.56 3.91
4362 7440 3.492102 AAAGTTTGTGAGCTCCTAGCA 57.508 42.857 12.15 2.24 45.56 3.49
4364 7442 6.861065 TGTAAAAAGTTTGTGAGCTCCTAG 57.139 37.500 12.15 0.00 0.00 3.02
4365 7443 7.633193 TTTGTAAAAAGTTTGTGAGCTCCTA 57.367 32.000 12.15 0.00 0.00 2.94
4388 7466 2.026729 GCAGACTCTAGAGGGGCTTTTT 60.027 50.000 23.50 0.00 0.00 1.94
4389 7467 1.557371 GCAGACTCTAGAGGGGCTTTT 59.443 52.381 23.50 0.30 0.00 2.27
4391 7469 0.041833 TGCAGACTCTAGAGGGGCTT 59.958 55.000 23.50 1.86 0.00 4.35
4392 7470 0.041833 TTGCAGACTCTAGAGGGGCT 59.958 55.000 23.50 14.18 0.00 5.19
4393 7471 0.905357 TTTGCAGACTCTAGAGGGGC 59.095 55.000 23.50 21.25 0.00 5.80
4394 7472 3.922171 AATTTGCAGACTCTAGAGGGG 57.078 47.619 23.50 12.93 0.00 4.79
4395 7473 4.098044 TCGTAATTTGCAGACTCTAGAGGG 59.902 45.833 23.50 13.27 0.00 4.30
4397 7475 6.141527 CGATTCGTAATTTGCAGACTCTAGAG 59.858 42.308 18.49 18.49 0.00 2.43
4398 7476 5.971792 CGATTCGTAATTTGCAGACTCTAGA 59.028 40.000 0.00 0.00 0.00 2.43
4399 7477 5.971792 TCGATTCGTAATTTGCAGACTCTAG 59.028 40.000 5.89 0.00 0.00 2.43
4400 7478 5.886992 TCGATTCGTAATTTGCAGACTCTA 58.113 37.500 5.89 0.00 0.00 2.43
4404 7482 5.643339 AGATCGATTCGTAATTTGCAGAC 57.357 39.130 5.89 0.00 0.00 3.51
4405 7483 7.200455 TCTAAGATCGATTCGTAATTTGCAGA 58.800 34.615 5.89 0.00 0.00 4.26
4406 7484 7.394870 TCTAAGATCGATTCGTAATTTGCAG 57.605 36.000 5.89 0.00 0.00 4.41
4407 7485 6.074302 GCTCTAAGATCGATTCGTAATTTGCA 60.074 38.462 5.89 0.00 0.00 4.08
4408 7486 6.074302 TGCTCTAAGATCGATTCGTAATTTGC 60.074 38.462 5.89 3.92 0.00 3.68
4409 7487 7.394870 TGCTCTAAGATCGATTCGTAATTTG 57.605 36.000 5.89 1.50 0.00 2.32
4410 7488 8.491152 CATTGCTCTAAGATCGATTCGTAATTT 58.509 33.333 5.89 0.46 0.00 1.82
4412 7490 7.371159 TCATTGCTCTAAGATCGATTCGTAAT 58.629 34.615 5.89 0.00 0.00 1.89
4416 7494 4.620609 CCTCATTGCTCTAAGATCGATTCG 59.379 45.833 0.00 0.00 0.00 3.34
4417 7495 4.388469 GCCTCATTGCTCTAAGATCGATTC 59.612 45.833 0.00 0.00 0.00 2.52
4419 7497 3.577848 AGCCTCATTGCTCTAAGATCGAT 59.422 43.478 0.00 0.00 36.75 3.59
4421 7499 3.383620 AGCCTCATTGCTCTAAGATCG 57.616 47.619 0.00 0.00 36.75 3.69
4422 7500 5.046735 TGGATAGCCTCATTGCTCTAAGATC 60.047 44.000 0.00 0.00 41.68 2.75
4435 7834 0.384309 CGCTAACGTGGATAGCCTCA 59.616 55.000 11.20 0.00 42.18 3.86
4462 7861 2.088423 ACGCACAGTTTCTCCAAACAA 58.912 42.857 0.74 0.00 43.98 2.83
4463 7862 1.668751 GACGCACAGTTTCTCCAAACA 59.331 47.619 0.74 0.00 43.98 2.83
4467 7866 0.179094 AACGACGCACAGTTTCTCCA 60.179 50.000 0.00 0.00 0.00 3.86
4499 7898 1.041437 GGATAAGAGACGAGGGGGTG 58.959 60.000 0.00 0.00 0.00 4.61
4500 7899 0.635009 TGGATAAGAGACGAGGGGGT 59.365 55.000 0.00 0.00 0.00 4.95
4501 7900 1.896465 GATGGATAAGAGACGAGGGGG 59.104 57.143 0.00 0.00 0.00 5.40
4502 7901 1.896465 GGATGGATAAGAGACGAGGGG 59.104 57.143 0.00 0.00 0.00 4.79
4503 7902 1.896465 GGGATGGATAAGAGACGAGGG 59.104 57.143 0.00 0.00 0.00 4.30
4532 7931 1.215423 AGAGGGAGAGGAAGAGAGAGC 59.785 57.143 0.00 0.00 0.00 4.09
4549 7948 1.007238 TGAGTGGTAGGGGAGGAAGAG 59.993 57.143 0.00 0.00 0.00 2.85
4637 8036 4.065281 ACGACACGGGGCAGCTAC 62.065 66.667 0.00 0.00 0.00 3.58
4653 8052 1.174712 AGCAACTCCATGTGTGGCAC 61.175 55.000 11.55 11.55 45.63 5.01
4654 8053 0.890542 GAGCAACTCCATGTGTGGCA 60.891 55.000 15.09 0.00 45.63 4.92
4683 8082 4.182433 TGTGCGAACCCACAGCCA 62.182 61.111 0.00 0.00 40.55 4.75
4705 8104 2.448926 TGGAGGTACACAATGACGTG 57.551 50.000 0.00 0.00 42.81 4.49
4706 8105 3.695830 ATTGGAGGTACACAATGACGT 57.304 42.857 8.35 0.00 36.95 4.34
4711 8110 1.280710 TCGGCATTGGAGGTACACAAT 59.719 47.619 0.00 0.00 38.38 2.71
4712 8111 0.687920 TCGGCATTGGAGGTACACAA 59.312 50.000 0.00 0.00 32.56 3.33
4713 8112 0.249120 CTCGGCATTGGAGGTACACA 59.751 55.000 0.00 0.00 0.00 3.72
4714 8113 0.462047 CCTCGGCATTGGAGGTACAC 60.462 60.000 0.00 0.00 44.92 2.90
4715 8114 1.904771 CCTCGGCATTGGAGGTACA 59.095 57.895 0.00 0.00 44.92 2.90
4716 8115 4.857251 CCTCGGCATTGGAGGTAC 57.143 61.111 0.00 0.00 44.92 3.34
4720 8119 0.758734 TATCACCCTCGGCATTGGAG 59.241 55.000 0.00 0.00 0.00 3.86
4721 8120 0.468226 GTATCACCCTCGGCATTGGA 59.532 55.000 0.00 0.00 0.00 3.53
4722 8121 0.180171 TGTATCACCCTCGGCATTGG 59.820 55.000 0.00 0.00 0.00 3.16
4723 8122 1.299541 GTGTATCACCCTCGGCATTG 58.700 55.000 0.00 0.00 0.00 2.82
4724 8123 3.780624 GTGTATCACCCTCGGCATT 57.219 52.632 0.00 0.00 0.00 3.56
4734 8133 2.373938 GTGAGCTGCGGTGTATCAC 58.626 57.895 0.00 2.36 34.13 3.06
4735 8134 4.910956 GTGAGCTGCGGTGTATCA 57.089 55.556 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.