Multiple sequence alignment - TraesCS2A01G245900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G245900 chr2A 100.000 4244 0 0 1 4244 357323507 357327750 0.000000e+00 7838.0
1 TraesCS2A01G245900 chr2D 91.416 1398 61 22 85 1456 286466400 286465036 0.000000e+00 1862.0
2 TraesCS2A01G245900 chr2D 95.194 1082 38 7 1453 2520 286464877 286463796 0.000000e+00 1698.0
3 TraesCS2A01G245900 chr2D 92.487 1118 39 7 2881 3981 286463737 286462648 0.000000e+00 1557.0
4 TraesCS2A01G245900 chr2D 95.666 323 14 0 2519 2841 351053447 351053769 1.750000e-143 520.0
5 TraesCS2A01G245900 chr2D 83.908 261 8 15 3978 4219 286462302 286462057 7.140000e-53 219.0
6 TraesCS2A01G245900 chr2D 97.561 82 2 0 2837 2918 286463813 286463732 1.590000e-29 141.0
7 TraesCS2A01G245900 chr2D 79.032 186 15 12 5 190 286466522 286466361 5.800000e-19 106.0
8 TraesCS2A01G245900 chr2B 89.359 921 51 16 2837 3726 317085928 317085024 0.000000e+00 1114.0
9 TraesCS2A01G245900 chr2B 96.160 625 20 3 845 1469 317088657 317088037 0.000000e+00 1018.0
10 TraesCS2A01G245900 chr2B 89.184 564 34 7 1971 2520 317086460 317085910 0.000000e+00 678.0
11 TraesCS2A01G245900 chr2B 91.768 413 29 4 1572 1979 317088023 317087611 1.710000e-158 569.0
12 TraesCS2A01G245900 chr2B 86.508 504 41 16 193 676 317099083 317098587 2.910000e-146 529.0
13 TraesCS2A01G245900 chr2B 85.542 249 21 9 3734 3980 317084968 317084733 3.280000e-61 246.0
14 TraesCS2A01G245900 chr2B 85.075 67 9 1 4142 4208 317084642 317084577 2.740000e-07 67.6
15 TraesCS2A01G245900 chr4D 96.594 323 11 0 2519 2841 47532839 47533161 1.740000e-148 536.0
16 TraesCS2A01G245900 chr4D 92.857 70 5 0 123 192 426517367 426517298 7.510000e-18 102.0
17 TraesCS2A01G245900 chr3A 96.285 323 12 0 2519 2841 369399427 369399105 8.080000e-147 531.0
18 TraesCS2A01G245900 chr3B 95.975 323 13 0 2519 2841 368598551 368598229 3.760000e-145 525.0
19 TraesCS2A01G245900 chr3B 90.566 53 5 0 140 192 94725408 94725356 2.120000e-08 71.3
20 TraesCS2A01G245900 chr1D 95.975 323 13 0 2519 2841 94050983 94050661 3.760000e-145 525.0
21 TraesCS2A01G245900 chr1D 95.975 323 13 0 2519 2841 452591126 452590804 3.760000e-145 525.0
22 TraesCS2A01G245900 chr1D 85.119 168 19 4 1080 1241 419985385 419985552 2.620000e-37 167.0
23 TraesCS2A01G245900 chr1D 83.851 161 25 1 1080 1240 421074183 421074342 7.350000e-33 152.0
24 TraesCS2A01G245900 chr3D 95.963 322 13 0 2520 2841 262995345 262995666 1.350000e-144 523.0
25 TraesCS2A01G245900 chr3D 94.100 339 20 0 2519 2857 118539348 118539010 2.260000e-142 516.0
26 TraesCS2A01G245900 chrUn 95.152 330 15 1 2519 2848 70286165 70285837 1.750000e-143 520.0
27 TraesCS2A01G245900 chr5B 78.171 339 52 18 1069 1390 620020864 620020531 3.350000e-46 196.0
28 TraesCS2A01G245900 chr5D 77.946 331 48 18 1080 1390 499430348 499430023 2.610000e-42 183.0
29 TraesCS2A01G245900 chr1B 86.905 168 16 4 1080 1241 566978233 566978400 2.610000e-42 183.0
30 TraesCS2A01G245900 chr1B 82.941 170 21 3 1080 1241 570480742 570480911 3.420000e-31 147.0
31 TraesCS2A01G245900 chr5A 77.039 331 53 15 1078 1390 623573972 623573647 7.300000e-38 169.0
32 TraesCS2A01G245900 chr6D 92.754 69 5 0 124 192 72017513 72017445 2.700000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G245900 chr2A 357323507 357327750 4243 False 7838.000000 7838 100.000000 1 4244 1 chr2A.!!$F1 4243
1 TraesCS2A01G245900 chr2D 286462057 286466522 4465 True 930.500000 1862 89.933000 5 4219 6 chr2D.!!$R1 4214
2 TraesCS2A01G245900 chr2B 317084577 317088657 4080 True 615.433333 1114 89.514667 845 4208 6 chr2B.!!$R2 3363

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
760 818 0.036010 AGAGGTCAAATCGCACCTGG 60.036 55.0 0.00 0.0 43.52 4.45 F
2561 3993 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.0 1.24 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2625 4057 0.032515 TCTACCCCGCCATCTCTTGA 60.033 55.0 0.0 0.0 0.00 3.02 R
4221 6156 0.112995 TGCATTCTGCCTTTGAGGGT 59.887 50.0 0.0 0.0 44.23 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.507140 TTGTGTTCCACCTCTCCACT 58.493 50.000 0.00 0.00 32.73 4.00
34 35 2.433604 CTCCACTGCTCTGATACCATGT 59.566 50.000 0.00 0.00 0.00 3.21
50 51 8.164733 TGATACCATGTAAAACTTAGGGTTTGA 58.835 33.333 0.00 0.00 46.18 2.69
61 62 4.141482 ACTTAGGGTTTGAGAAACTGCTCA 60.141 41.667 0.00 0.00 42.81 4.26
107 151 4.033990 ACAGTCATGTACAGATGCTACG 57.966 45.455 0.33 0.00 38.09 3.51
113 157 7.323895 CAGTCATGTACAGATGCTACGTATTAC 59.676 40.741 0.33 0.00 0.00 1.89
132 176 7.065563 CGTATTACACAGTCTAAGAGGTACACT 59.934 40.741 0.00 0.00 0.00 3.55
135 179 6.572167 ACACAGTCTAAGAGGTACACTAAC 57.428 41.667 0.00 0.00 0.00 2.34
136 180 6.066690 ACACAGTCTAAGAGGTACACTAACA 58.933 40.000 0.00 0.00 0.00 2.41
173 217 7.923344 AGAATACAAGTCATGTACAGATGCTAC 59.077 37.037 0.33 0.00 46.90 3.58
184 228 9.278734 CATGTACAGATGCTACGTATTATACAG 57.721 37.037 0.33 0.00 0.00 2.74
219 263 9.713684 AGATAAATTGGTGGGATAGAAAAATGA 57.286 29.630 0.00 0.00 0.00 2.57
236 281 9.423061 AGAAAAATGATGAAAGGTTTTAATCGG 57.577 29.630 0.00 0.00 0.00 4.18
241 286 6.234920 TGATGAAAGGTTTTAATCGGAGTGA 58.765 36.000 0.00 0.00 0.00 3.41
246 291 2.095372 GGTTTTAATCGGAGTGAAGGCG 59.905 50.000 0.00 0.00 0.00 5.52
249 294 0.099968 TAATCGGAGTGAAGGCGACG 59.900 55.000 0.00 0.00 0.00 5.12
252 297 2.811317 GGAGTGAAGGCGACGCTG 60.811 66.667 20.77 0.00 0.00 5.18
253 298 3.482783 GAGTGAAGGCGACGCTGC 61.483 66.667 20.77 9.77 0.00 5.25
273 318 5.241728 GCTGCCAACTCCCCTTTAATAATAG 59.758 44.000 0.00 0.00 0.00 1.73
323 368 2.953466 TCTTCCGAACTTCATACCGG 57.047 50.000 0.00 0.00 43.02 5.28
408 453 7.450323 TCATGTTCATGCAATCAGATTCCATAT 59.550 33.333 0.00 0.00 0.00 1.78
542 597 3.096489 AGCATTGATTGTTTGTTGCGT 57.904 38.095 0.00 0.00 35.34 5.24
546 601 2.661504 TGATTGTTTGTTGCGTCGAG 57.338 45.000 0.00 0.00 0.00 4.04
552 607 1.369839 TTTGTTGCGTCGAGTGCCAA 61.370 50.000 7.08 2.87 0.00 4.52
554 609 1.163420 TGTTGCGTCGAGTGCCAAAT 61.163 50.000 7.08 0.00 0.00 2.32
565 620 3.553511 CGAGTGCCAAATAAGTAGCTCAG 59.446 47.826 0.00 0.00 0.00 3.35
583 638 6.940739 AGCTCAGATTGTATTAACAGACTGT 58.059 36.000 1.07 1.07 39.44 3.55
599 654 6.931838 ACAGACTGTAATTTCATTACCGAGA 58.068 36.000 6.24 0.00 43.42 4.04
619 674 7.232737 ACCGAGAAATAAAATCCACTTTTTCCT 59.767 33.333 0.00 0.00 38.09 3.36
682 738 3.330701 AGGATTAGAGTTTCTTGGTGGCA 59.669 43.478 0.00 0.00 0.00 4.92
687 743 2.108952 AGAGTTTCTTGGTGGCAAGGAT 59.891 45.455 0.00 0.00 33.26 3.24
698 754 3.195396 GGTGGCAAGGATGAGCATAAAAA 59.805 43.478 0.00 0.00 0.00 1.94
742 800 3.008485 GGGGTATCTGGAGAATGGCTAAG 59.992 52.174 0.00 0.00 0.00 2.18
754 812 2.024176 TGGCTAAGAGGTCAAATCGC 57.976 50.000 0.00 0.00 0.00 4.58
755 813 1.277842 TGGCTAAGAGGTCAAATCGCA 59.722 47.619 0.00 0.00 0.00 5.10
756 814 1.666189 GGCTAAGAGGTCAAATCGCAC 59.334 52.381 0.00 0.00 0.00 5.34
757 815 1.666189 GCTAAGAGGTCAAATCGCACC 59.334 52.381 0.00 0.00 0.00 5.01
758 816 2.678190 GCTAAGAGGTCAAATCGCACCT 60.678 50.000 0.00 0.00 46.35 4.00
759 817 1.813513 AAGAGGTCAAATCGCACCTG 58.186 50.000 0.00 0.00 43.52 4.00
760 818 0.036010 AGAGGTCAAATCGCACCTGG 60.036 55.000 0.00 0.00 43.52 4.45
761 819 0.321653 GAGGTCAAATCGCACCTGGT 60.322 55.000 0.00 0.00 43.52 4.00
762 820 0.606401 AGGTCAAATCGCACCTGGTG 60.606 55.000 22.46 22.46 41.79 4.17
763 821 1.586154 GGTCAAATCGCACCTGGTGG 61.586 60.000 27.02 17.11 39.83 4.61
764 822 1.971167 TCAAATCGCACCTGGTGGC 60.971 57.895 27.02 17.83 36.63 5.01
765 823 1.973281 CAAATCGCACCTGGTGGCT 60.973 57.895 27.02 7.32 36.63 4.75
766 824 0.676466 CAAATCGCACCTGGTGGCTA 60.676 55.000 27.02 12.42 36.63 3.93
767 825 0.037590 AAATCGCACCTGGTGGCTAA 59.962 50.000 27.02 11.08 36.63 3.09
768 826 0.255890 AATCGCACCTGGTGGCTAAT 59.744 50.000 27.02 12.58 36.63 1.73
769 827 1.128200 ATCGCACCTGGTGGCTAATA 58.872 50.000 27.02 6.87 36.63 0.98
770 828 0.906066 TCGCACCTGGTGGCTAATAA 59.094 50.000 27.02 0.00 36.63 1.40
771 829 1.279558 TCGCACCTGGTGGCTAATAAA 59.720 47.619 27.02 0.00 36.63 1.40
772 830 2.088423 CGCACCTGGTGGCTAATAAAA 58.912 47.619 27.02 0.00 36.63 1.52
773 831 2.490115 CGCACCTGGTGGCTAATAAAAA 59.510 45.455 27.02 0.00 36.63 1.94
774 832 3.130340 CGCACCTGGTGGCTAATAAAAAT 59.870 43.478 27.02 0.00 36.63 1.82
775 833 4.336993 CGCACCTGGTGGCTAATAAAAATA 59.663 41.667 27.02 0.00 36.63 1.40
776 834 5.163602 CGCACCTGGTGGCTAATAAAAATAA 60.164 40.000 27.02 0.00 36.63 1.40
777 835 6.626181 CGCACCTGGTGGCTAATAAAAATAAA 60.626 38.462 27.02 0.00 36.63 1.40
778 836 7.100409 GCACCTGGTGGCTAATAAAAATAAAA 58.900 34.615 27.02 0.00 36.63 1.52
779 837 7.768582 GCACCTGGTGGCTAATAAAAATAAAAT 59.231 33.333 27.02 0.00 36.63 1.82
780 838 9.313118 CACCTGGTGGCTAATAAAAATAAAATC 57.687 33.333 19.23 0.00 36.63 2.17
781 839 8.194769 ACCTGGTGGCTAATAAAAATAAAATCG 58.805 33.333 0.00 0.00 36.63 3.34
790 848 4.705337 AAAAATAAAATCGCACCGCCTA 57.295 36.364 0.00 0.00 0.00 3.93
822 880 2.158249 AGCCCATGGAGTCTATCTGCTA 60.158 50.000 15.22 0.00 35.48 3.49
823 881 2.836981 GCCCATGGAGTCTATCTGCTAT 59.163 50.000 15.22 0.00 35.48 2.97
825 883 4.653341 GCCCATGGAGTCTATCTGCTATAT 59.347 45.833 15.22 0.00 35.48 0.86
826 884 5.835819 GCCCATGGAGTCTATCTGCTATATA 59.164 44.000 15.22 0.00 35.48 0.86
827 885 6.496565 GCCCATGGAGTCTATCTGCTATATAT 59.503 42.308 15.22 0.00 35.48 0.86
828 886 7.671819 GCCCATGGAGTCTATCTGCTATATATA 59.328 40.741 15.22 0.00 35.48 0.86
829 887 9.019656 CCCATGGAGTCTATCTGCTATATATAC 57.980 40.741 15.22 0.00 35.48 1.47
830 888 9.019656 CCATGGAGTCTATCTGCTATATATACC 57.980 40.741 5.56 0.00 35.48 2.73
831 889 9.579932 CATGGAGTCTATCTGCTATATATACCA 57.420 37.037 0.00 0.00 35.48 3.25
833 891 7.721842 TGGAGTCTATCTGCTATATATACCAGC 59.278 40.741 9.40 10.07 35.48 4.85
834 892 7.175990 GGAGTCTATCTGCTATATATACCAGCC 59.824 44.444 13.14 1.78 34.31 4.85
957 1016 1.821332 CCGCAGCTTCCCATTCCTC 60.821 63.158 0.00 0.00 0.00 3.71
958 1017 2.176273 CGCAGCTTCCCATTCCTCG 61.176 63.158 0.00 0.00 0.00 4.63
959 1018 2.476320 GCAGCTTCCCATTCCTCGC 61.476 63.158 0.00 0.00 0.00 5.03
1300 1373 3.469008 TGTTGTCCTTCGTCTGATGTT 57.531 42.857 0.00 0.00 0.00 2.71
1503 1741 5.706447 TGCCTGGATCTGTCTACTTACTAT 58.294 41.667 0.00 0.00 0.00 2.12
1509 1747 5.241064 GGATCTGTCTACTTACTATTGCGGA 59.759 44.000 0.00 0.00 0.00 5.54
1529 1767 5.163784 GCGGAACTCAGGGATTTTAAGTTAC 60.164 44.000 0.00 0.00 30.68 2.50
1539 1777 8.852135 CAGGGATTTTAAGTTACTTGTTTGGTA 58.148 33.333 8.00 0.00 0.00 3.25
1667 1909 1.745653 GCTGTTAATTCAGGTGCCTCC 59.254 52.381 0.00 0.00 36.12 4.30
1712 1954 5.822132 AAGATCTATTGGCTACATGCTCT 57.178 39.130 0.00 0.00 42.39 4.09
1947 2194 5.420725 TCCTCACTATGCTGTATGTTGTT 57.579 39.130 0.00 0.00 0.00 2.83
1950 2197 7.564793 TCCTCACTATGCTGTATGTTGTTTAT 58.435 34.615 0.00 0.00 0.00 1.40
1982 3388 4.340381 GGTGCTATGCATTTGATCTTTCCT 59.660 41.667 3.54 0.00 41.91 3.36
1987 3393 7.093640 TGCTATGCATTTGATCTTTCCTTCTTT 60.094 33.333 3.54 0.00 31.71 2.52
1992 3398 8.030692 TGCATTTGATCTTTCCTTCTTTACATG 58.969 33.333 0.00 0.00 0.00 3.21
2097 3503 4.003648 AGCAATGCCGGCTATTATACTTC 58.996 43.478 29.70 10.23 40.47 3.01
2123 3529 3.539604 ACATGATTCTGAGCTGCTAACC 58.460 45.455 0.15 0.00 0.00 2.85
2146 3554 8.512966 ACCTAAAAAGGAGAATATGCTCTTTC 57.487 34.615 8.46 0.00 33.68 2.62
2200 3608 6.931281 TCTCACTGTATTATAGCTGCATTTCC 59.069 38.462 1.02 0.00 0.00 3.13
2366 3784 9.807649 ATAAATTATAAGCTGACCAAAAAGCAG 57.192 29.630 0.00 0.00 42.06 4.24
2368 3786 4.661461 GCTGACCAAAAAGCAGCC 57.339 55.556 0.00 0.00 46.94 4.85
2369 3787 1.741525 GCTGACCAAAAAGCAGCCA 59.258 52.632 0.00 0.00 46.94 4.75
2370 3788 0.104671 GCTGACCAAAAAGCAGCCAA 59.895 50.000 0.00 0.00 46.94 4.52
2371 3789 1.870993 GCTGACCAAAAAGCAGCCAAG 60.871 52.381 0.00 0.00 46.94 3.61
2426 3857 7.333423 TCGAAGTAAACATAAGATGGAACCTTG 59.667 37.037 0.00 0.00 33.60 3.61
2523 3955 9.930693 AGTAGTGTTGGTTTTAACAAAAATTGA 57.069 25.926 0.00 0.00 41.75 2.57
2526 3958 9.495572 AGTGTTGGTTTTAACAAAAATTGAAGA 57.504 25.926 0.00 0.00 41.75 2.87
2527 3959 9.753669 GTGTTGGTTTTAACAAAAATTGAAGAG 57.246 29.630 0.00 0.00 41.75 2.85
2528 3960 9.712305 TGTTGGTTTTAACAAAAATTGAAGAGA 57.288 25.926 0.00 0.00 37.60 3.10
2531 3963 8.878769 TGGTTTTAACAAAAATTGAAGAGAAGC 58.121 29.630 0.00 0.00 31.13 3.86
2532 3964 9.098355 GGTTTTAACAAAAATTGAAGAGAAGCT 57.902 29.630 0.00 0.00 31.13 3.74
2535 3967 9.651913 TTTAACAAAAATTGAAGAGAAGCTTGT 57.348 25.926 2.10 0.00 36.83 3.16
2536 3968 7.761651 AACAAAAATTGAAGAGAAGCTTGTC 57.238 32.000 15.54 15.54 36.83 3.18
2537 3969 6.276091 ACAAAAATTGAAGAGAAGCTTGTCC 58.724 36.000 19.26 6.46 36.83 4.02
2538 3970 6.127366 ACAAAAATTGAAGAGAAGCTTGTCCA 60.127 34.615 19.26 8.99 36.83 4.02
2539 3971 6.469782 AAAATTGAAGAGAAGCTTGTCCAA 57.530 33.333 19.26 16.61 36.83 3.53
2540 3972 5.444663 AATTGAAGAGAAGCTTGTCCAAC 57.555 39.130 19.26 11.55 36.83 3.77
2541 3973 3.558931 TGAAGAGAAGCTTGTCCAACA 57.441 42.857 19.26 13.75 36.83 3.33
2542 3974 4.090761 TGAAGAGAAGCTTGTCCAACAT 57.909 40.909 19.26 0.00 36.83 2.71
2543 3975 4.067896 TGAAGAGAAGCTTGTCCAACATC 58.932 43.478 19.26 10.83 36.83 3.06
2544 3976 2.693069 AGAGAAGCTTGTCCAACATCG 58.307 47.619 19.26 0.00 0.00 3.84
2545 3977 2.037772 AGAGAAGCTTGTCCAACATCGT 59.962 45.455 19.26 0.00 0.00 3.73
2546 3978 2.413453 GAGAAGCTTGTCCAACATCGTC 59.587 50.000 12.50 0.00 0.00 4.20
2547 3979 2.037772 AGAAGCTTGTCCAACATCGTCT 59.962 45.455 2.10 0.00 0.00 4.18
2548 3980 1.800805 AGCTTGTCCAACATCGTCTG 58.199 50.000 0.00 0.00 0.00 3.51
2549 3981 1.344438 AGCTTGTCCAACATCGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
2550 3982 1.728971 GCTTGTCCAACATCGTCTGAG 59.271 52.381 0.00 0.00 0.00 3.35
2551 3983 2.610479 GCTTGTCCAACATCGTCTGAGA 60.610 50.000 0.00 0.00 0.00 3.27
2552 3984 3.854666 CTTGTCCAACATCGTCTGAGAT 58.145 45.455 0.00 0.00 0.00 2.75
2556 3988 2.567169 TCCAACATCGTCTGAGATGGTT 59.433 45.455 16.20 0.00 45.46 3.67
2557 3989 3.007940 TCCAACATCGTCTGAGATGGTTT 59.992 43.478 16.20 0.00 45.46 3.27
2558 3990 3.125829 CCAACATCGTCTGAGATGGTTTG 59.874 47.826 16.20 12.97 45.46 2.93
2559 3991 3.125829 CAACATCGTCTGAGATGGTTTGG 59.874 47.826 16.20 0.00 45.46 3.28
2560 3992 2.283298 CATCGTCTGAGATGGTTTGGG 58.717 52.381 1.24 0.00 43.07 4.12
2561 3993 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.000 1.24 0.00 0.00 5.36
2562 3994 0.321564 CGTCTGAGATGGTTTGGGCA 60.322 55.000 0.00 0.00 0.00 5.36
2563 3995 1.679944 CGTCTGAGATGGTTTGGGCAT 60.680 52.381 0.00 0.00 0.00 4.40
2564 3996 2.419990 CGTCTGAGATGGTTTGGGCATA 60.420 50.000 0.00 0.00 0.00 3.14
2565 3997 3.745480 CGTCTGAGATGGTTTGGGCATAT 60.745 47.826 0.00 0.00 0.00 1.78
2566 3998 4.210331 GTCTGAGATGGTTTGGGCATATT 58.790 43.478 0.00 0.00 0.00 1.28
2567 3999 4.276926 GTCTGAGATGGTTTGGGCATATTC 59.723 45.833 0.00 0.00 0.00 1.75
2568 4000 4.079844 TCTGAGATGGTTTGGGCATATTCA 60.080 41.667 0.00 0.00 0.00 2.57
2569 4001 4.209538 TGAGATGGTTTGGGCATATTCAG 58.790 43.478 0.00 0.00 0.00 3.02
2570 4002 2.961062 AGATGGTTTGGGCATATTCAGC 59.039 45.455 0.00 0.00 0.00 4.26
2571 4003 1.102154 TGGTTTGGGCATATTCAGCG 58.898 50.000 0.00 0.00 0.00 5.18
2572 4004 0.249031 GGTTTGGGCATATTCAGCGC 60.249 55.000 0.00 0.00 44.24 5.92
2575 4007 3.348236 GGGCATATTCAGCGCAGG 58.652 61.111 11.47 0.20 43.54 4.85
2576 4008 2.641559 GGCATATTCAGCGCAGGC 59.358 61.111 11.47 0.29 40.37 4.85
2577 4009 2.641559 GCATATTCAGCGCAGGCC 59.358 61.111 11.47 0.00 41.24 5.19
2578 4010 1.895707 GCATATTCAGCGCAGGCCT 60.896 57.895 11.47 0.00 41.24 5.19
2579 4011 1.849976 GCATATTCAGCGCAGGCCTC 61.850 60.000 11.47 0.00 41.24 4.70
2580 4012 1.072159 ATATTCAGCGCAGGCCTCC 59.928 57.895 11.47 0.00 41.24 4.30
2581 4013 1.699054 ATATTCAGCGCAGGCCTCCA 61.699 55.000 11.47 0.00 41.24 3.86
2582 4014 2.315781 TATTCAGCGCAGGCCTCCAG 62.316 60.000 11.47 0.00 41.24 3.86
2584 4016 4.399395 CAGCGCAGGCCTCCAGAA 62.399 66.667 11.47 0.00 41.24 3.02
2585 4017 4.093291 AGCGCAGGCCTCCAGAAG 62.093 66.667 11.47 0.00 41.24 2.85
2587 4019 4.093291 CGCAGGCCTCCAGAAGCT 62.093 66.667 0.00 0.00 0.00 3.74
2588 4020 2.124778 GCAGGCCTCCAGAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
2589 4021 2.588989 CAGGCCTCCAGAAGCTCC 59.411 66.667 0.00 0.00 0.00 4.70
2590 4022 2.123632 AGGCCTCCAGAAGCTCCA 59.876 61.111 0.00 0.00 0.00 3.86
2591 4023 1.994507 AGGCCTCCAGAAGCTCCAG 60.995 63.158 0.00 0.00 0.00 3.86
2592 4024 2.297129 GGCCTCCAGAAGCTCCAGT 61.297 63.158 0.00 0.00 0.00 4.00
2593 4025 1.078567 GCCTCCAGAAGCTCCAGTG 60.079 63.158 0.00 0.00 0.00 3.66
2594 4026 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
2595 4027 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
2596 4028 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
2597 4029 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
2598 4030 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
2599 4031 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
2600 4032 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
2601 4033 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
2602 4034 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
2603 4035 1.884926 GCTCCAGTGCATAGCGGAC 60.885 63.158 0.00 0.00 35.88 4.79
2604 4036 1.517361 CTCCAGTGCATAGCGGACA 59.483 57.895 0.00 0.00 38.70 4.02
2605 4037 0.529337 CTCCAGTGCATAGCGGACAG 60.529 60.000 0.00 0.00 38.70 3.51
2617 4049 2.744787 GCGGACAGCTAAATCATGTG 57.255 50.000 0.00 0.00 44.04 3.21
2618 4050 1.331756 GCGGACAGCTAAATCATGTGG 59.668 52.381 0.00 0.00 44.04 4.17
2619 4051 2.905075 CGGACAGCTAAATCATGTGGA 58.095 47.619 0.00 0.00 0.00 4.02
2620 4052 2.868583 CGGACAGCTAAATCATGTGGAG 59.131 50.000 0.00 0.00 0.00 3.86
2621 4053 3.430790 CGGACAGCTAAATCATGTGGAGA 60.431 47.826 0.00 0.00 0.00 3.71
2622 4054 4.517285 GGACAGCTAAATCATGTGGAGAA 58.483 43.478 0.00 0.00 0.00 2.87
2623 4055 5.128919 GGACAGCTAAATCATGTGGAGAAT 58.871 41.667 0.00 0.00 0.00 2.40
2624 4056 5.008415 GGACAGCTAAATCATGTGGAGAATG 59.992 44.000 0.00 0.00 0.00 2.67
2625 4057 5.503927 ACAGCTAAATCATGTGGAGAATGT 58.496 37.500 0.00 0.00 0.00 2.71
2626 4058 5.587844 ACAGCTAAATCATGTGGAGAATGTC 59.412 40.000 0.00 0.00 0.00 3.06
2627 4059 5.587443 CAGCTAAATCATGTGGAGAATGTCA 59.413 40.000 0.00 0.00 0.00 3.58
2628 4060 6.094464 CAGCTAAATCATGTGGAGAATGTCAA 59.906 38.462 0.00 0.00 0.00 3.18
2629 4061 6.318144 AGCTAAATCATGTGGAGAATGTCAAG 59.682 38.462 0.00 0.00 0.00 3.02
2630 4062 6.317140 GCTAAATCATGTGGAGAATGTCAAGA 59.683 38.462 0.00 0.00 0.00 3.02
2631 4063 6.754702 AAATCATGTGGAGAATGTCAAGAG 57.245 37.500 0.00 0.00 0.00 2.85
2632 4064 5.688814 ATCATGTGGAGAATGTCAAGAGA 57.311 39.130 0.00 0.00 0.00 3.10
2633 4065 5.688814 TCATGTGGAGAATGTCAAGAGAT 57.311 39.130 0.00 0.00 0.00 2.75
2634 4066 5.425630 TCATGTGGAGAATGTCAAGAGATG 58.574 41.667 0.00 0.00 0.00 2.90
2635 4067 4.212143 TGTGGAGAATGTCAAGAGATGG 57.788 45.455 0.00 0.00 0.00 3.51
2636 4068 2.941720 GTGGAGAATGTCAAGAGATGGC 59.058 50.000 0.00 0.00 0.00 4.40
2637 4069 2.208431 GGAGAATGTCAAGAGATGGCG 58.792 52.381 0.00 0.00 36.00 5.69
2638 4070 2.208431 GAGAATGTCAAGAGATGGCGG 58.792 52.381 0.00 0.00 36.00 6.13
2639 4071 1.134280 AGAATGTCAAGAGATGGCGGG 60.134 52.381 0.00 0.00 36.00 6.13
2640 4072 0.107017 AATGTCAAGAGATGGCGGGG 60.107 55.000 0.00 0.00 36.00 5.73
2641 4073 1.274703 ATGTCAAGAGATGGCGGGGT 61.275 55.000 0.00 0.00 36.00 4.95
2642 4074 0.616395 TGTCAAGAGATGGCGGGGTA 60.616 55.000 0.00 0.00 36.00 3.69
2643 4075 0.105039 GTCAAGAGATGGCGGGGTAG 59.895 60.000 0.00 0.00 0.00 3.18
2644 4076 0.032515 TCAAGAGATGGCGGGGTAGA 60.033 55.000 0.00 0.00 0.00 2.59
2645 4077 0.105039 CAAGAGATGGCGGGGTAGAC 59.895 60.000 0.00 0.00 0.00 2.59
2646 4078 1.049289 AAGAGATGGCGGGGTAGACC 61.049 60.000 0.00 0.00 39.11 3.85
2656 4088 2.773993 GGGGTAGACCGAATTTGACA 57.226 50.000 0.00 0.00 41.60 3.58
2657 4089 3.277142 GGGGTAGACCGAATTTGACAT 57.723 47.619 0.00 0.00 41.60 3.06
2658 4090 2.943033 GGGGTAGACCGAATTTGACATG 59.057 50.000 0.00 0.00 41.60 3.21
2659 4091 2.943033 GGGTAGACCGAATTTGACATGG 59.057 50.000 0.00 0.00 36.71 3.66
2660 4092 2.943033 GGTAGACCGAATTTGACATGGG 59.057 50.000 0.00 0.00 0.00 4.00
2661 4093 3.370103 GGTAGACCGAATTTGACATGGGA 60.370 47.826 0.00 0.00 0.00 4.37
2662 4094 2.991250 AGACCGAATTTGACATGGGAG 58.009 47.619 0.00 0.00 0.00 4.30
2663 4095 2.017049 GACCGAATTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
2664 4096 1.633432 ACCGAATTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
2665 4097 2.292267 CCGAATTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
2666 4098 2.356125 CCGAATTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
2667 4099 2.939103 CGAATTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
2668 4100 3.282885 GAATTTGACATGGGAGGAGTCC 58.717 50.000 0.00 0.00 43.05 3.85
2669 4101 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
2670 4102 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
2671 4103 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
2672 4104 0.613777 GACATGGGAGGAGTCCGTTT 59.386 55.000 2.76 0.00 45.05 3.60
2673 4105 1.829222 GACATGGGAGGAGTCCGTTTA 59.171 52.381 2.76 0.00 45.05 2.01
2674 4106 1.831736 ACATGGGAGGAGTCCGTTTAG 59.168 52.381 2.76 0.00 45.05 1.85
2675 4107 2.108168 CATGGGAGGAGTCCGTTTAGA 58.892 52.381 2.76 0.00 45.05 2.10
2676 4108 1.848652 TGGGAGGAGTCCGTTTAGAG 58.151 55.000 2.76 0.00 45.05 2.43
2677 4109 1.356738 TGGGAGGAGTCCGTTTAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
2678 4110 2.025898 GGGAGGAGTCCGTTTAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
2679 4111 2.356947 GGGAGGAGTCCGTTTAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
2680 4112 2.684374 GGAGGAGTCCGTTTAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
2681 4113 2.684374 GAGGAGTCCGTTTAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
2682 4114 2.309458 AGGAGTCCGTTTAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
2683 4115 2.424246 GGAGTCCGTTTAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
2684 4116 3.345414 GAGTCCGTTTAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
2685 4117 3.757493 GAGTCCGTTTAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
2686 4118 3.759618 AGTCCGTTTAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
2687 4119 3.090037 TCCGTTTAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
2688 4120 3.090037 CCGTTTAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
2689 4121 3.702045 CCGTTTAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
2690 4122 4.160626 CCGTTTAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
2691 4123 5.105752 CGTTTAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
2692 4124 5.423886 GTTTAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
2693 4125 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
2694 4126 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
2695 4127 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
2696 4128 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
2697 4129 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
2698 4130 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
2699 4131 4.624913 AGACCTGAAGGATTGGAGTATCA 58.375 43.478 2.62 0.00 38.94 2.15
2700 4132 4.407296 AGACCTGAAGGATTGGAGTATCAC 59.593 45.833 2.62 0.00 38.94 3.06
2701 4133 3.456277 ACCTGAAGGATTGGAGTATCACC 59.544 47.826 2.62 0.00 38.94 4.02
2702 4134 3.455910 CCTGAAGGATTGGAGTATCACCA 59.544 47.826 0.00 0.00 34.60 4.17
2703 4135 6.527086 ACCTGAAGGATTGGAGTATCACCAA 61.527 44.000 2.62 0.00 43.61 3.67
2704 4136 7.950045 ACCTGAAGGATTGGAGTATCACCAAA 61.950 42.308 2.62 0.00 43.17 3.28
2705 4137 9.647145 ACCTGAAGGATTGGAGTATCACCAAAG 62.647 44.444 2.62 0.00 43.17 2.77
2711 4143 5.344743 TTGGAGTATCACCAAAGAGCTAG 57.655 43.478 0.00 0.00 43.22 3.42
2712 4144 3.133003 TGGAGTATCACCAAAGAGCTAGC 59.867 47.826 6.62 6.62 36.25 3.42
2713 4145 3.386402 GGAGTATCACCAAAGAGCTAGCT 59.614 47.826 19.45 19.45 36.25 3.32
2714 4146 4.585162 GGAGTATCACCAAAGAGCTAGCTA 59.415 45.833 19.38 0.00 36.25 3.32
2715 4147 5.245075 GGAGTATCACCAAAGAGCTAGCTAT 59.755 44.000 19.38 12.73 36.25 2.97
2716 4148 6.095432 AGTATCACCAAAGAGCTAGCTATG 57.905 41.667 19.38 16.41 0.00 2.23
2717 4149 3.827008 TCACCAAAGAGCTAGCTATGG 57.173 47.619 28.91 28.91 33.36 2.74
2718 4150 3.374764 TCACCAAAGAGCTAGCTATGGA 58.625 45.455 33.71 19.25 32.26 3.41
2719 4151 3.133003 TCACCAAAGAGCTAGCTATGGAC 59.867 47.826 33.71 18.05 32.26 4.02
2720 4152 3.107601 ACCAAAGAGCTAGCTATGGACA 58.892 45.455 33.71 0.00 32.26 4.02
2721 4153 3.133721 ACCAAAGAGCTAGCTATGGACAG 59.866 47.826 33.71 17.94 32.26 3.51
2722 4154 3.494048 CCAAAGAGCTAGCTATGGACAGG 60.494 52.174 27.69 15.84 30.53 4.00
2723 4155 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
2724 4156 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
2725 4157 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
2726 4158 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
2727 4159 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
2728 4160 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
2729 4161 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2730 4162 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2731 4163 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
2733 4165 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2734 4166 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2735 4167 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2736 4168 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2737 4169 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2738 4170 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2739 4171 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2740 4172 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2741 4173 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2742 4174 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2743 4175 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2744 4176 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2745 4177 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2746 4178 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2747 4179 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2748 4180 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2749 4181 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2750 4182 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2751 4183 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2752 4184 0.466922 AGCTTGCTATCCATGTGCCC 60.467 55.000 0.00 0.00 0.00 5.36
2753 4185 1.789078 GCTTGCTATCCATGTGCCCG 61.789 60.000 0.00 0.00 0.00 6.13
2754 4186 0.179048 CTTGCTATCCATGTGCCCGA 60.179 55.000 0.00 0.00 0.00 5.14
2755 4187 0.179048 TTGCTATCCATGTGCCCGAG 60.179 55.000 0.00 0.00 0.00 4.63
2756 4188 1.963338 GCTATCCATGTGCCCGAGC 60.963 63.158 0.00 0.00 40.48 5.03
2757 4189 1.302033 CTATCCATGTGCCCGAGCC 60.302 63.158 0.00 0.00 38.69 4.70
2758 4190 2.043604 CTATCCATGTGCCCGAGCCA 62.044 60.000 0.00 0.00 38.69 4.75
2759 4191 1.418097 TATCCATGTGCCCGAGCCAT 61.418 55.000 0.00 0.00 38.69 4.40
2760 4192 2.971095 ATCCATGTGCCCGAGCCATG 62.971 60.000 11.59 11.59 42.54 3.66
2761 4193 2.124612 CATGTGCCCGAGCCATGA 60.125 61.111 12.76 0.00 44.14 3.07
2762 4194 2.184830 CATGTGCCCGAGCCATGAG 61.185 63.158 12.76 0.00 44.14 2.90
2763 4195 2.673200 ATGTGCCCGAGCCATGAGT 61.673 57.895 0.00 0.00 38.69 3.41
2764 4196 2.045926 GTGCCCGAGCCATGAGTT 60.046 61.111 0.00 0.00 38.69 3.01
2765 4197 2.046023 TGCCCGAGCCATGAGTTG 60.046 61.111 0.00 0.00 38.69 3.16
2774 4206 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
2775 4207 1.081892 CCATGAGTTGGTTGCGAGAG 58.918 55.000 0.00 0.00 40.99 3.20
2776 4208 1.609061 CCATGAGTTGGTTGCGAGAGT 60.609 52.381 0.00 0.00 40.99 3.24
2777 4209 2.146342 CATGAGTTGGTTGCGAGAGTT 58.854 47.619 0.00 0.00 0.00 3.01
2778 4210 2.325583 TGAGTTGGTTGCGAGAGTTT 57.674 45.000 0.00 0.00 0.00 2.66
2779 4211 3.462483 TGAGTTGGTTGCGAGAGTTTA 57.538 42.857 0.00 0.00 0.00 2.01
2780 4212 4.002906 TGAGTTGGTTGCGAGAGTTTAT 57.997 40.909 0.00 0.00 0.00 1.40
2781 4213 3.745975 TGAGTTGGTTGCGAGAGTTTATG 59.254 43.478 0.00 0.00 0.00 1.90
2782 4214 3.074412 AGTTGGTTGCGAGAGTTTATGG 58.926 45.455 0.00 0.00 0.00 2.74
2783 4215 2.107950 TGGTTGCGAGAGTTTATGGG 57.892 50.000 0.00 0.00 0.00 4.00
2784 4216 1.349688 TGGTTGCGAGAGTTTATGGGT 59.650 47.619 0.00 0.00 0.00 4.51
2785 4217 2.224670 TGGTTGCGAGAGTTTATGGGTT 60.225 45.455 0.00 0.00 0.00 4.11
2786 4218 2.817844 GGTTGCGAGAGTTTATGGGTTT 59.182 45.455 0.00 0.00 0.00 3.27
2787 4219 3.119955 GGTTGCGAGAGTTTATGGGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
2788 4220 3.410631 TGCGAGAGTTTATGGGTTTCA 57.589 42.857 0.00 0.00 0.00 2.69
2789 4221 3.071479 TGCGAGAGTTTATGGGTTTCAC 58.929 45.455 0.00 0.00 0.00 3.18
2790 4222 2.418976 GCGAGAGTTTATGGGTTTCACC 59.581 50.000 0.00 0.00 37.60 4.02
2791 4223 3.868754 GCGAGAGTTTATGGGTTTCACCT 60.869 47.826 0.00 0.00 38.64 4.00
2792 4224 3.933332 CGAGAGTTTATGGGTTTCACCTC 59.067 47.826 0.00 0.00 38.64 3.85
2793 4225 4.322801 CGAGAGTTTATGGGTTTCACCTCT 60.323 45.833 0.00 0.00 38.64 3.69
2794 4226 5.105473 CGAGAGTTTATGGGTTTCACCTCTA 60.105 44.000 0.00 0.00 38.64 2.43
2795 4227 6.301169 AGAGTTTATGGGTTTCACCTCTAG 57.699 41.667 0.00 0.00 38.64 2.43
2796 4228 4.844884 AGTTTATGGGTTTCACCTCTAGC 58.155 43.478 0.00 0.00 38.64 3.42
2797 4229 3.926058 TTATGGGTTTCACCTCTAGCC 57.074 47.619 0.00 0.00 38.64 3.93
2798 4230 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2799 4231 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2800 4232 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2801 4233 1.136500 GGGTTTCACCTCTAGCCTACG 59.864 57.143 0.00 0.00 38.64 3.51
2802 4234 1.471153 GGTTTCACCTCTAGCCTACGC 60.471 57.143 0.00 0.00 34.73 4.42
2803 4235 0.822164 TTTCACCTCTAGCCTACGCC 59.178 55.000 0.00 0.00 34.57 5.68
2804 4236 0.323999 TTCACCTCTAGCCTACGCCA 60.324 55.000 0.00 0.00 34.57 5.69
2805 4237 0.323999 TCACCTCTAGCCTACGCCAA 60.324 55.000 0.00 0.00 34.57 4.52
2806 4238 0.753262 CACCTCTAGCCTACGCCAAT 59.247 55.000 0.00 0.00 34.57 3.16
2807 4239 1.139058 CACCTCTAGCCTACGCCAATT 59.861 52.381 0.00 0.00 34.57 2.32
2808 4240 1.838077 ACCTCTAGCCTACGCCAATTT 59.162 47.619 0.00 0.00 34.57 1.82
2809 4241 2.213499 CCTCTAGCCTACGCCAATTTG 58.787 52.381 0.00 0.00 34.57 2.32
2810 4242 2.420129 CCTCTAGCCTACGCCAATTTGT 60.420 50.000 0.00 0.00 34.57 2.83
2811 4243 3.270877 CTCTAGCCTACGCCAATTTGTT 58.729 45.455 0.00 0.00 34.57 2.83
2812 4244 3.681593 TCTAGCCTACGCCAATTTGTTT 58.318 40.909 0.00 0.00 34.57 2.83
2813 4245 2.723124 AGCCTACGCCAATTTGTTTG 57.277 45.000 0.00 0.00 34.57 2.93
2824 4256 3.392882 CAATTTGTTTGGGACTGAAGGC 58.607 45.455 0.00 0.00 0.00 4.35
2825 4257 2.452600 TTTGTTTGGGACTGAAGGCT 57.547 45.000 0.00 0.00 0.00 4.58
2826 4258 1.691196 TTGTTTGGGACTGAAGGCTG 58.309 50.000 0.00 0.00 0.00 4.85
2827 4259 0.550914 TGTTTGGGACTGAAGGCTGT 59.449 50.000 0.00 0.00 0.00 4.40
2828 4260 0.954452 GTTTGGGACTGAAGGCTGTG 59.046 55.000 0.00 0.00 0.00 3.66
2829 4261 0.550914 TTTGGGACTGAAGGCTGTGT 59.449 50.000 0.00 0.00 0.00 3.72
2830 4262 0.550914 TTGGGACTGAAGGCTGTGTT 59.449 50.000 0.00 0.00 0.00 3.32
2831 4263 0.179020 TGGGACTGAAGGCTGTGTTG 60.179 55.000 0.00 0.00 0.00 3.33
2832 4264 0.179018 GGGACTGAAGGCTGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
2833 4265 1.680338 GGACTGAAGGCTGTGTTGTT 58.320 50.000 0.00 0.00 0.00 2.83
2834 4266 1.334869 GGACTGAAGGCTGTGTTGTTG 59.665 52.381 0.00 0.00 0.00 3.33
2835 4267 2.017049 GACTGAAGGCTGTGTTGTTGT 58.983 47.619 0.00 0.00 0.00 3.32
2893 4327 0.559205 AAAAACGGAGGGGGAGGTTT 59.441 50.000 0.00 0.00 34.32 3.27
2978 4441 6.874134 ACATGTAGTTACCTGACAATCTGTTC 59.126 38.462 0.00 0.00 0.00 3.18
3189 4652 1.630369 TCCTACAAGCCAGTGAAGCAT 59.370 47.619 0.00 0.00 0.00 3.79
3204 4667 1.060163 AGCATGGTAGGCCCGGTATT 61.060 55.000 0.00 0.00 35.15 1.89
3401 4866 4.759782 TGAGCTGTTCTACCTAAATGCTC 58.240 43.478 0.00 0.00 43.90 4.26
3472 4937 6.972328 TGCTTGTCAGTTTGTGAGATTTTTAC 59.028 34.615 0.00 0.00 35.13 2.01
3521 4987 0.974010 CATTTGGCCTGCCCATCACT 60.974 55.000 3.32 0.00 44.89 3.41
3562 5028 1.438651 GCCACAACACGAGCTCATAA 58.561 50.000 15.40 0.00 0.00 1.90
3589 5060 7.538678 GCTTTGTGATAACATCGTTTTGATTCT 59.461 33.333 0.00 0.00 34.13 2.40
3606 5079 0.543277 TCTCAGCCCATGTAGCCTTG 59.457 55.000 1.56 0.00 0.00 3.61
3662 5155 6.638468 GCGGTTAATGGATCATTTGAATTCTC 59.362 38.462 7.05 0.00 35.54 2.87
3680 5173 9.952188 TGAATTCTCTGTTACTATTCATACTCG 57.048 33.333 7.05 0.00 32.10 4.18
3686 5179 7.633621 TCTGTTACTATTCATACTCGGTTACG 58.366 38.462 0.00 0.00 42.74 3.18
3693 5186 2.427812 TCATACTCGGTTACGCCATCAA 59.572 45.455 0.00 0.00 40.69 2.57
3704 5197 1.732259 ACGCCATCAAGCTAGTTTTCG 59.268 47.619 0.00 0.00 0.00 3.46
3711 5204 5.734498 CCATCAAGCTAGTTTTCGATTTTCG 59.266 40.000 0.00 0.00 42.10 3.46
3732 5273 6.926280 TCGCATTGATTTGTTGTGTAAATC 57.074 33.333 0.00 0.00 42.22 2.17
3736 5277 6.399880 GCATTGATTTGTTGTGTAAATCGGTG 60.400 38.462 0.00 0.00 43.88 4.94
3750 5291 1.960417 TCGGTGTGAATTGAGCACAA 58.040 45.000 0.00 0.00 46.63 3.33
3752 5293 2.226200 TCGGTGTGAATTGAGCACAATG 59.774 45.455 10.25 0.00 46.63 2.82
3772 5315 8.441608 CACAATGAACTCAGAAAGATAACTCAG 58.558 37.037 0.00 0.00 0.00 3.35
3811 5356 4.553756 AGAAAGAAAACTCAGTTTCCGC 57.446 40.909 2.45 0.00 38.10 5.54
3813 5358 5.365619 AGAAAGAAAACTCAGTTTCCGCTA 58.634 37.500 2.45 0.00 38.10 4.26
3938 5483 2.952310 GCTCCAAAACTTGTGGTTCTCT 59.048 45.455 0.00 0.00 37.12 3.10
3981 5526 2.817258 CAAGGTTTGCCCTCGAACAATA 59.183 45.455 0.00 0.00 45.47 1.90
3982 5527 3.366052 AGGTTTGCCCTCGAACAATAT 57.634 42.857 0.00 0.00 40.71 1.28
3983 5528 4.497291 AGGTTTGCCCTCGAACAATATA 57.503 40.909 0.00 0.00 40.71 0.86
3984 5529 4.451900 AGGTTTGCCCTCGAACAATATAG 58.548 43.478 0.00 0.00 40.71 1.31
3985 5530 3.564225 GGTTTGCCCTCGAACAATATAGG 59.436 47.826 0.00 0.00 38.15 2.57
4070 5990 4.519213 TGGGGTACTTTGATGAATTACCG 58.481 43.478 0.00 0.00 41.88 4.02
4071 5991 3.881089 GGGGTACTTTGATGAATTACCGG 59.119 47.826 0.00 0.00 41.88 5.28
4072 5992 4.384427 GGGGTACTTTGATGAATTACCGGA 60.384 45.833 9.46 0.00 41.88 5.14
4073 5993 4.814771 GGGTACTTTGATGAATTACCGGAG 59.185 45.833 9.46 0.00 41.88 4.63
4074 5994 5.425630 GGTACTTTGATGAATTACCGGAGT 58.574 41.667 9.46 0.00 34.89 3.85
4075 5995 5.878669 GGTACTTTGATGAATTACCGGAGTT 59.121 40.000 9.46 0.00 34.89 3.01
4076 5996 6.373495 GGTACTTTGATGAATTACCGGAGTTT 59.627 38.462 9.46 0.00 34.89 2.66
4077 5997 6.254281 ACTTTGATGAATTACCGGAGTTTG 57.746 37.500 9.46 0.00 0.00 2.93
4096 6016 3.350219 TGGAGTTTGAGGAATAGCACC 57.650 47.619 0.00 0.00 0.00 5.01
4113 6033 5.950758 AGCACCGTAAATGTTCATGTAAA 57.049 34.783 0.00 0.00 0.00 2.01
4114 6034 6.509418 AGCACCGTAAATGTTCATGTAAAT 57.491 33.333 0.00 0.00 0.00 1.40
4115 6035 6.321717 AGCACCGTAAATGTTCATGTAAATG 58.678 36.000 0.00 0.00 0.00 2.32
4116 6036 6.072175 AGCACCGTAAATGTTCATGTAAATGT 60.072 34.615 0.00 0.00 0.00 2.71
4117 6037 6.584563 GCACCGTAAATGTTCATGTAAATGTT 59.415 34.615 0.00 0.00 0.00 2.71
4118 6038 7.201316 GCACCGTAAATGTTCATGTAAATGTTC 60.201 37.037 0.00 0.00 0.00 3.18
4119 6039 7.805542 CACCGTAAATGTTCATGTAAATGTTCA 59.194 33.333 0.00 0.00 0.00 3.18
4120 6040 8.519526 ACCGTAAATGTTCATGTAAATGTTCAT 58.480 29.630 0.00 0.00 0.00 2.57
4122 6042 9.340695 CGTAAATGTTCATGTAAATGTTCATGT 57.659 29.630 2.76 0.00 41.22 3.21
4174 6109 7.817418 TCCAGTATCTAAATATTTTGGCCAC 57.183 36.000 3.88 4.09 0.00 5.01
4210 6145 7.951530 ACCAATTGATTTGTTTGATCAACTC 57.048 32.000 7.89 5.30 43.87 3.01
4219 6154 5.072040 TGTTTGATCAACTCGAGATAGCA 57.928 39.130 21.68 9.75 36.21 3.49
4220 6155 4.864806 TGTTTGATCAACTCGAGATAGCAC 59.135 41.667 21.68 6.40 36.21 4.40
4221 6156 4.718940 TTGATCAACTCGAGATAGCACA 57.281 40.909 21.68 8.93 0.00 4.57
4222 6157 4.033990 TGATCAACTCGAGATAGCACAC 57.966 45.455 21.68 3.36 0.00 3.82
4223 6158 2.941453 TCAACTCGAGATAGCACACC 57.059 50.000 21.68 0.00 0.00 4.16
4224 6159 1.476891 TCAACTCGAGATAGCACACCC 59.523 52.381 21.68 0.00 0.00 4.61
4225 6160 1.478510 CAACTCGAGATAGCACACCCT 59.521 52.381 21.68 0.00 0.00 4.34
4226 6161 1.394618 ACTCGAGATAGCACACCCTC 58.605 55.000 21.68 0.00 0.00 4.30
4227 6162 1.341089 ACTCGAGATAGCACACCCTCA 60.341 52.381 21.68 0.00 0.00 3.86
4228 6163 1.751351 CTCGAGATAGCACACCCTCAA 59.249 52.381 6.58 0.00 0.00 3.02
4229 6164 2.166459 CTCGAGATAGCACACCCTCAAA 59.834 50.000 6.58 0.00 0.00 2.69
4230 6165 2.166459 TCGAGATAGCACACCCTCAAAG 59.834 50.000 0.00 0.00 0.00 2.77
4231 6166 2.739932 CGAGATAGCACACCCTCAAAGG 60.740 54.545 0.00 0.00 34.30 3.11
4232 6167 1.065126 AGATAGCACACCCTCAAAGGC 60.065 52.381 0.00 0.00 32.73 4.35
4233 6168 0.698238 ATAGCACACCCTCAAAGGCA 59.302 50.000 0.00 0.00 32.73 4.75
4234 6169 0.036732 TAGCACACCCTCAAAGGCAG 59.963 55.000 0.00 0.00 32.73 4.85
4235 6170 1.228245 GCACACCCTCAAAGGCAGA 60.228 57.895 0.00 0.00 32.73 4.26
4236 6171 0.823356 GCACACCCTCAAAGGCAGAA 60.823 55.000 0.00 0.00 32.73 3.02
4237 6172 1.915141 CACACCCTCAAAGGCAGAAT 58.085 50.000 0.00 0.00 32.73 2.40
4238 6173 1.542915 CACACCCTCAAAGGCAGAATG 59.457 52.381 0.00 0.00 40.87 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.764369 AGCAGTGGAGAGGTGGAACA 60.764 55.000 0.00 0.00 39.98 3.18
17 18 6.054860 AGTTTTACATGGTATCAGAGCAGT 57.945 37.500 0.00 0.00 39.39 4.40
18 19 6.992063 AAGTTTTACATGGTATCAGAGCAG 57.008 37.500 0.00 0.00 39.39 4.24
19 20 7.047891 CCTAAGTTTTACATGGTATCAGAGCA 58.952 38.462 0.00 0.00 40.58 4.26
34 35 6.831868 AGCAGTTTCTCAAACCCTAAGTTTTA 59.168 34.615 0.00 0.00 46.79 1.52
64 65 2.124507 ATCCACACTCGTGTTGGGGG 62.125 60.000 14.53 7.89 42.83 5.40
68 69 4.744570 ACTGTATATCCACACTCGTGTTG 58.255 43.478 0.00 0.00 42.83 3.33
82 83 7.175119 ACGTAGCATCTGTACATGACTGTATAT 59.825 37.037 0.00 0.00 39.93 0.86
86 87 3.444034 ACGTAGCATCTGTACATGACTGT 59.556 43.478 0.00 0.00 39.49 3.55
87 88 4.033990 ACGTAGCATCTGTACATGACTG 57.966 45.455 0.00 0.00 0.00 3.51
107 151 8.278729 AGTGTACCTCTTAGACTGTGTAATAC 57.721 38.462 0.00 0.00 33.04 1.89
113 157 6.570672 TGTTAGTGTACCTCTTAGACTGTG 57.429 41.667 0.00 0.00 35.14 3.66
136 180 9.890629 ACATGACTTGTATTCTGTATTGTACAT 57.109 29.630 0.00 0.00 35.84 2.29
200 244 7.093377 CCTTTCATCATTTTTCTATCCCACCAA 60.093 37.037 0.00 0.00 0.00 3.67
217 261 6.234920 TCACTCCGATTAAAACCTTTCATCA 58.765 36.000 0.00 0.00 0.00 3.07
219 263 6.151144 CCTTCACTCCGATTAAAACCTTTCAT 59.849 38.462 0.00 0.00 0.00 2.57
236 281 3.482783 GCAGCGTCGCCTTCACTC 61.483 66.667 14.86 0.00 0.00 3.51
246 291 3.553095 AAGGGGAGTTGGCAGCGTC 62.553 63.158 0.00 0.00 0.00 5.19
249 294 1.852633 ATTAAAGGGGAGTTGGCAGC 58.147 50.000 0.00 0.00 0.00 5.25
252 297 6.838382 TCTCTATTATTAAAGGGGAGTTGGC 58.162 40.000 0.00 0.00 0.00 4.52
253 298 9.868160 AAATCTCTATTATTAAAGGGGAGTTGG 57.132 33.333 0.00 0.00 0.00 3.77
273 318 3.772060 AGCATGCGGAAAGAAAATCTC 57.228 42.857 13.01 0.00 0.00 2.75
304 349 2.173519 ACCGGTATGAAGTTCGGAAGA 58.826 47.619 4.49 0.00 44.69 2.87
305 350 2.667473 ACCGGTATGAAGTTCGGAAG 57.333 50.000 4.49 0.00 44.69 3.46
323 368 6.255887 GTCACATCATAGGTGCACTAAGTTAC 59.744 42.308 17.98 0.00 36.22 2.50
429 474 9.421806 ACGCTCAATTTTCAATGAAATAAATCA 57.578 25.926 9.41 0.00 31.34 2.57
430 475 9.891535 GACGCTCAATTTTCAATGAAATAAATC 57.108 29.630 9.41 0.00 31.34 2.17
443 495 9.774742 ATAACTCTATTTTGACGCTCAATTTTC 57.225 29.630 2.09 0.00 36.11 2.29
481 536 9.672086 CAACATTAGCTAGACTATGAGTAACTC 57.328 37.037 9.59 0.00 0.00 3.01
542 597 3.194755 TGAGCTACTTATTTGGCACTCGA 59.805 43.478 0.00 0.00 0.00 4.04
546 601 5.355350 ACAATCTGAGCTACTTATTTGGCAC 59.645 40.000 0.00 0.00 0.00 5.01
599 654 8.744568 TTTGCAGGAAAAAGTGGATTTTATTT 57.255 26.923 0.00 0.00 40.27 1.40
725 783 3.645687 GACCTCTTAGCCATTCTCCAGAT 59.354 47.826 0.00 0.00 0.00 2.90
742 800 0.321653 ACCAGGTGCGATTTGACCTC 60.322 55.000 0.00 0.00 40.85 3.85
754 812 9.313118 GATTTTATTTTTATTAGCCACCAGGTG 57.687 33.333 13.35 13.35 37.19 4.00
755 813 8.194769 CGATTTTATTTTTATTAGCCACCAGGT 58.805 33.333 0.00 0.00 37.19 4.00
756 814 7.169140 GCGATTTTATTTTTATTAGCCACCAGG 59.831 37.037 0.00 0.00 38.23 4.45
757 815 7.704472 TGCGATTTTATTTTTATTAGCCACCAG 59.296 33.333 0.00 0.00 0.00 4.00
758 816 7.489757 GTGCGATTTTATTTTTATTAGCCACCA 59.510 33.333 0.00 0.00 0.00 4.17
759 817 7.042992 GGTGCGATTTTATTTTTATTAGCCACC 60.043 37.037 0.00 0.00 0.00 4.61
760 818 7.305763 CGGTGCGATTTTATTTTTATTAGCCAC 60.306 37.037 0.00 0.00 0.00 5.01
761 819 6.693545 CGGTGCGATTTTATTTTTATTAGCCA 59.306 34.615 0.00 0.00 0.00 4.75
762 820 6.345487 GCGGTGCGATTTTATTTTTATTAGCC 60.345 38.462 0.00 0.00 0.00 3.93
763 821 6.345487 GGCGGTGCGATTTTATTTTTATTAGC 60.345 38.462 0.00 0.00 0.00 3.09
764 822 6.915843 AGGCGGTGCGATTTTATTTTTATTAG 59.084 34.615 0.00 0.00 0.00 1.73
765 823 6.797454 AGGCGGTGCGATTTTATTTTTATTA 58.203 32.000 0.00 0.00 0.00 0.98
766 824 5.656480 AGGCGGTGCGATTTTATTTTTATT 58.344 33.333 0.00 0.00 0.00 1.40
767 825 5.257082 AGGCGGTGCGATTTTATTTTTAT 57.743 34.783 0.00 0.00 0.00 1.40
768 826 4.705337 AGGCGGTGCGATTTTATTTTTA 57.295 36.364 0.00 0.00 0.00 1.52
769 827 3.586100 AGGCGGTGCGATTTTATTTTT 57.414 38.095 0.00 0.00 0.00 1.94
770 828 4.705337 TTAGGCGGTGCGATTTTATTTT 57.295 36.364 0.00 0.00 0.00 1.82
771 829 4.911514 ATTAGGCGGTGCGATTTTATTT 57.088 36.364 0.00 0.00 0.00 1.40
772 830 4.499019 CCAATTAGGCGGTGCGATTTTATT 60.499 41.667 0.00 0.00 0.00 1.40
773 831 3.004315 CCAATTAGGCGGTGCGATTTTAT 59.996 43.478 0.00 0.00 0.00 1.40
774 832 2.356382 CCAATTAGGCGGTGCGATTTTA 59.644 45.455 0.00 0.00 0.00 1.52
775 833 1.134175 CCAATTAGGCGGTGCGATTTT 59.866 47.619 0.00 0.00 0.00 1.82
776 834 0.738389 CCAATTAGGCGGTGCGATTT 59.262 50.000 0.00 0.00 0.00 2.17
777 835 2.404083 CCAATTAGGCGGTGCGATT 58.596 52.632 0.00 0.00 0.00 3.34
778 836 4.141144 CCAATTAGGCGGTGCGAT 57.859 55.556 0.00 0.00 0.00 4.58
801 859 1.055040 GCAGATAGACTCCATGGGCT 58.945 55.000 13.02 9.74 0.00 5.19
822 880 2.159099 CGATGCGTGGGCTGGTATATAT 60.159 50.000 0.00 0.00 40.82 0.86
823 881 1.203758 CGATGCGTGGGCTGGTATATA 59.796 52.381 0.00 0.00 40.82 0.86
825 883 1.365999 CGATGCGTGGGCTGGTATA 59.634 57.895 0.00 0.00 40.82 1.47
826 884 2.108976 CGATGCGTGGGCTGGTAT 59.891 61.111 0.00 0.00 40.82 2.73
827 885 4.830765 GCGATGCGTGGGCTGGTA 62.831 66.667 0.00 0.00 40.82 3.25
833 891 4.114997 GTTTGGGCGATGCGTGGG 62.115 66.667 0.00 0.00 0.00 4.61
834 892 2.211619 AATGTTTGGGCGATGCGTGG 62.212 55.000 0.00 0.00 0.00 4.94
973 1035 3.818787 GGCTTCGAGCGGGTACGA 61.819 66.667 0.00 0.00 43.62 3.43
1503 1741 2.286365 AAAATCCCTGAGTTCCGCAA 57.714 45.000 0.00 0.00 0.00 4.85
1509 1747 8.762481 AACAAGTAACTTAAAATCCCTGAGTT 57.238 30.769 0.00 0.00 35.07 3.01
1529 1767 9.345517 CATTTATTGTGACAGATACCAAACAAG 57.654 33.333 0.00 0.00 31.67 3.16
1575 1813 6.174760 TGCCGCTAAGATTAACCTTCTAAAA 58.825 36.000 0.00 0.00 0.00 1.52
1667 1909 7.550551 TCTTAAAGATTGTTGCAGGAGACATAG 59.449 37.037 0.00 0.00 0.00 2.23
1947 2194 3.879892 TGCATAGCACCATAAACGCATAA 59.120 39.130 0.00 0.00 31.71 1.90
1950 2197 1.743996 TGCATAGCACCATAAACGCA 58.256 45.000 0.00 0.00 31.71 5.24
1992 3398 9.213799 AGTCTGAACTAATTTCAAACTCAGATC 57.786 33.333 2.52 0.00 40.93 2.75
2097 3503 5.752892 AGCAGCTCAGAATCATGTTATTG 57.247 39.130 0.00 0.00 0.00 1.90
2123 3529 8.744568 AGGAAAGAGCATATTCTCCTTTTTAG 57.255 34.615 0.00 0.00 33.66 1.85
2146 3554 6.615088 CAACATTACAGTGGAAAGAATGAGG 58.385 40.000 0.00 0.00 32.90 3.86
2359 3777 2.298163 CCATTCAGTCTTGGCTGCTTTT 59.702 45.455 0.00 0.00 36.49 2.27
2360 3778 1.891150 CCATTCAGTCTTGGCTGCTTT 59.109 47.619 0.00 0.00 36.49 3.51
2361 3779 1.074405 TCCATTCAGTCTTGGCTGCTT 59.926 47.619 0.00 0.00 36.49 3.91
2362 3780 0.694771 TCCATTCAGTCTTGGCTGCT 59.305 50.000 0.00 0.00 36.49 4.24
2363 3781 1.471684 CTTCCATTCAGTCTTGGCTGC 59.528 52.381 0.00 0.00 36.49 5.25
2364 3782 3.008330 CTCTTCCATTCAGTCTTGGCTG 58.992 50.000 0.00 0.00 37.81 4.85
2365 3783 2.641815 ACTCTTCCATTCAGTCTTGGCT 59.358 45.455 0.00 0.00 32.80 4.75
2366 3784 3.064900 ACTCTTCCATTCAGTCTTGGC 57.935 47.619 0.00 0.00 32.80 4.52
2367 3785 3.755378 CCAACTCTTCCATTCAGTCTTGG 59.245 47.826 0.00 0.00 0.00 3.61
2368 3786 3.755378 CCCAACTCTTCCATTCAGTCTTG 59.245 47.826 0.00 0.00 0.00 3.02
2369 3787 3.245052 CCCCAACTCTTCCATTCAGTCTT 60.245 47.826 0.00 0.00 0.00 3.01
2370 3788 2.307098 CCCCAACTCTTCCATTCAGTCT 59.693 50.000 0.00 0.00 0.00 3.24
2371 3789 2.040412 ACCCCAACTCTTCCATTCAGTC 59.960 50.000 0.00 0.00 0.00 3.51
2441 3873 7.863722 TGTTTCCTGGTAAGCCAATAAGTATA 58.136 34.615 0.00 0.00 45.51 1.47
2500 3932 9.495572 TCTTCAATTTTTGTTAAAACCAACACT 57.504 25.926 0.00 0.00 38.12 3.55
2501 3933 9.753669 CTCTTCAATTTTTGTTAAAACCAACAC 57.246 29.630 0.00 0.00 38.12 3.32
2502 3934 9.712305 TCTCTTCAATTTTTGTTAAAACCAACA 57.288 25.926 0.00 0.00 36.15 3.33
2505 3937 8.878769 GCTTCTCTTCAATTTTTGTTAAAACCA 58.121 29.630 0.00 0.00 36.15 3.67
2506 3938 9.098355 AGCTTCTCTTCAATTTTTGTTAAAACC 57.902 29.630 0.00 0.00 36.15 3.27
2509 3941 9.651913 ACAAGCTTCTCTTCAATTTTTGTTAAA 57.348 25.926 0.00 0.00 31.27 1.52
2510 3942 9.301153 GACAAGCTTCTCTTCAATTTTTGTTAA 57.699 29.630 0.00 0.00 31.27 2.01
2511 3943 7.920682 GGACAAGCTTCTCTTCAATTTTTGTTA 59.079 33.333 0.00 0.00 31.27 2.41
2512 3944 6.758416 GGACAAGCTTCTCTTCAATTTTTGTT 59.242 34.615 0.00 0.00 31.27 2.83
2513 3945 6.127366 TGGACAAGCTTCTCTTCAATTTTTGT 60.127 34.615 0.00 0.00 31.27 2.83
2514 3946 6.275335 TGGACAAGCTTCTCTTCAATTTTTG 58.725 36.000 0.00 0.00 31.27 2.44
2515 3947 6.469782 TGGACAAGCTTCTCTTCAATTTTT 57.530 33.333 0.00 0.00 31.27 1.94
2516 3948 6.127366 TGTTGGACAAGCTTCTCTTCAATTTT 60.127 34.615 0.00 0.00 31.27 1.82
2517 3949 5.360714 TGTTGGACAAGCTTCTCTTCAATTT 59.639 36.000 0.00 0.00 31.27 1.82
2518 3950 4.889409 TGTTGGACAAGCTTCTCTTCAATT 59.111 37.500 0.00 0.00 31.27 2.32
2519 3951 4.464008 TGTTGGACAAGCTTCTCTTCAAT 58.536 39.130 0.00 0.00 31.27 2.57
2520 3952 3.884895 TGTTGGACAAGCTTCTCTTCAA 58.115 40.909 0.00 0.00 31.27 2.69
2521 3953 3.558931 TGTTGGACAAGCTTCTCTTCA 57.441 42.857 0.00 0.00 31.27 3.02
2522 3954 3.124297 CGATGTTGGACAAGCTTCTCTTC 59.876 47.826 0.00 0.00 31.27 2.87
2523 3955 3.070018 CGATGTTGGACAAGCTTCTCTT 58.930 45.455 0.00 0.00 34.78 2.85
2524 3956 2.037772 ACGATGTTGGACAAGCTTCTCT 59.962 45.455 0.00 0.00 0.00 3.10
2525 3957 2.413453 GACGATGTTGGACAAGCTTCTC 59.587 50.000 0.00 0.00 0.00 2.87
2526 3958 2.037772 AGACGATGTTGGACAAGCTTCT 59.962 45.455 0.00 0.00 0.00 2.85
2527 3959 2.158449 CAGACGATGTTGGACAAGCTTC 59.842 50.000 0.00 0.00 0.00 3.86
2528 3960 2.146342 CAGACGATGTTGGACAAGCTT 58.854 47.619 0.00 0.00 0.00 3.74
2529 3961 1.344438 TCAGACGATGTTGGACAAGCT 59.656 47.619 0.00 0.00 0.00 3.74
2530 3962 1.728971 CTCAGACGATGTTGGACAAGC 59.271 52.381 0.00 0.00 0.00 4.01
2531 3963 3.303881 TCTCAGACGATGTTGGACAAG 57.696 47.619 0.00 0.00 0.00 3.16
2532 3964 3.588955 CATCTCAGACGATGTTGGACAA 58.411 45.455 0.00 0.00 36.80 3.18
2533 3965 2.094026 CCATCTCAGACGATGTTGGACA 60.094 50.000 0.00 0.00 39.26 4.02
2534 3966 2.093973 ACCATCTCAGACGATGTTGGAC 60.094 50.000 0.00 0.00 39.26 4.02
2535 3967 2.179427 ACCATCTCAGACGATGTTGGA 58.821 47.619 0.00 0.00 39.26 3.53
2536 3968 2.680312 ACCATCTCAGACGATGTTGG 57.320 50.000 0.00 0.39 39.26 3.77
2537 3969 3.125829 CCAAACCATCTCAGACGATGTTG 59.874 47.826 0.00 7.25 39.26 3.33
2538 3970 3.338249 CCAAACCATCTCAGACGATGTT 58.662 45.455 0.00 0.00 39.26 2.71
2539 3971 2.355108 CCCAAACCATCTCAGACGATGT 60.355 50.000 0.00 0.00 39.26 3.06
2540 3972 2.283298 CCCAAACCATCTCAGACGATG 58.717 52.381 0.00 0.00 40.32 3.84
2541 3973 1.407437 GCCCAAACCATCTCAGACGAT 60.407 52.381 0.00 0.00 0.00 3.73
2542 3974 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.00 0.00 4.20
2543 3975 0.321564 TGCCCAAACCATCTCAGACG 60.322 55.000 0.00 0.00 0.00 4.18
2544 3976 2.134789 ATGCCCAAACCATCTCAGAC 57.865 50.000 0.00 0.00 0.00 3.51
2545 3977 4.079844 TGAATATGCCCAAACCATCTCAGA 60.080 41.667 0.00 0.00 0.00 3.27
2546 3978 4.209538 TGAATATGCCCAAACCATCTCAG 58.790 43.478 0.00 0.00 0.00 3.35
2547 3979 4.209538 CTGAATATGCCCAAACCATCTCA 58.790 43.478 0.00 0.00 0.00 3.27
2548 3980 3.005155 GCTGAATATGCCCAAACCATCTC 59.995 47.826 0.00 0.00 0.00 2.75
2549 3981 2.961062 GCTGAATATGCCCAAACCATCT 59.039 45.455 0.00 0.00 0.00 2.90
2550 3982 2.287788 CGCTGAATATGCCCAAACCATC 60.288 50.000 0.00 0.00 0.00 3.51
2551 3983 1.682854 CGCTGAATATGCCCAAACCAT 59.317 47.619 0.00 0.00 0.00 3.55
2552 3984 1.102154 CGCTGAATATGCCCAAACCA 58.898 50.000 0.00 0.00 0.00 3.67
2553 3985 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
2554 3986 0.455410 TGCGCTGAATATGCCCAAAC 59.545 50.000 9.73 0.00 0.00 2.93
2555 3987 0.740149 CTGCGCTGAATATGCCCAAA 59.260 50.000 9.73 0.00 0.00 3.28
2556 3988 1.102809 CCTGCGCTGAATATGCCCAA 61.103 55.000 16.65 0.00 0.00 4.12
2557 3989 1.526686 CCTGCGCTGAATATGCCCA 60.527 57.895 16.65 0.00 0.00 5.36
2558 3990 2.912624 GCCTGCGCTGAATATGCCC 61.913 63.158 16.65 0.00 0.00 5.36
2559 3991 2.641559 GCCTGCGCTGAATATGCC 59.358 61.111 16.65 0.00 0.00 4.40
2560 3992 1.849976 GAGGCCTGCGCTGAATATGC 61.850 60.000 12.00 9.73 34.44 3.14
2561 3993 1.233285 GGAGGCCTGCGCTGAATATG 61.233 60.000 12.00 0.00 34.44 1.78
2562 3994 1.072159 GGAGGCCTGCGCTGAATAT 59.928 57.895 12.00 0.00 34.44 1.28
2563 3995 2.315781 CTGGAGGCCTGCGCTGAATA 62.316 60.000 20.39 0.00 34.44 1.75
2564 3996 3.694058 CTGGAGGCCTGCGCTGAAT 62.694 63.158 20.39 0.55 34.44 2.57
2565 3997 4.399395 CTGGAGGCCTGCGCTGAA 62.399 66.667 20.39 0.00 34.44 3.02
2567 3999 4.399395 TTCTGGAGGCCTGCGCTG 62.399 66.667 20.39 12.20 34.44 5.18
2568 4000 4.093291 CTTCTGGAGGCCTGCGCT 62.093 66.667 20.39 0.00 34.44 5.92
2570 4002 4.093291 AGCTTCTGGAGGCCTGCG 62.093 66.667 20.39 14.23 33.44 5.18
2571 4003 2.124778 GAGCTTCTGGAGGCCTGC 60.125 66.667 18.95 18.95 33.44 4.85
2572 4004 2.254737 CTGGAGCTTCTGGAGGCCTG 62.255 65.000 12.00 0.00 33.44 4.85
2573 4005 1.994507 CTGGAGCTTCTGGAGGCCT 60.995 63.158 3.86 3.86 33.44 5.19
2574 4006 2.297129 ACTGGAGCTTCTGGAGGCC 61.297 63.158 3.68 0.00 33.44 5.19
2575 4007 1.078567 CACTGGAGCTTCTGGAGGC 60.079 63.158 3.68 0.00 0.00 4.70
2576 4008 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
2577 4009 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
2578 4010 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
2579 4011 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
2580 4012 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
2581 4013 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
2582 4014 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
2583 4015 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
2584 4016 2.060383 TCCGCTATGCACTGGAGCT 61.060 57.895 9.31 0.00 33.91 4.09
2585 4017 1.884926 GTCCGCTATGCACTGGAGC 60.885 63.158 0.00 0.00 0.00 4.70
2586 4018 0.529337 CTGTCCGCTATGCACTGGAG 60.529 60.000 0.00 0.00 0.00 3.86
2587 4019 1.517361 CTGTCCGCTATGCACTGGA 59.483 57.895 0.00 0.00 0.00 3.86
2588 4020 2.176273 GCTGTCCGCTATGCACTGG 61.176 63.158 0.00 0.00 35.14 4.00
2589 4021 3.403277 GCTGTCCGCTATGCACTG 58.597 61.111 0.00 0.00 35.14 3.66
2598 4030 1.331756 CCACATGATTTAGCTGTCCGC 59.668 52.381 0.00 0.00 39.57 5.54
2599 4031 2.868583 CTCCACATGATTTAGCTGTCCG 59.131 50.000 0.00 0.00 0.00 4.79
2600 4032 4.142609 TCTCCACATGATTTAGCTGTCC 57.857 45.455 0.00 0.00 0.00 4.02
2601 4033 5.587844 ACATTCTCCACATGATTTAGCTGTC 59.412 40.000 0.00 0.00 0.00 3.51
2602 4034 5.503927 ACATTCTCCACATGATTTAGCTGT 58.496 37.500 0.00 0.00 0.00 4.40
2603 4035 5.587443 TGACATTCTCCACATGATTTAGCTG 59.413 40.000 0.00 0.00 0.00 4.24
2604 4036 5.748402 TGACATTCTCCACATGATTTAGCT 58.252 37.500 0.00 0.00 0.00 3.32
2605 4037 6.317140 TCTTGACATTCTCCACATGATTTAGC 59.683 38.462 0.00 0.00 0.00 3.09
2606 4038 7.767659 TCTCTTGACATTCTCCACATGATTTAG 59.232 37.037 0.00 0.00 0.00 1.85
2607 4039 7.623630 TCTCTTGACATTCTCCACATGATTTA 58.376 34.615 0.00 0.00 0.00 1.40
2608 4040 6.479006 TCTCTTGACATTCTCCACATGATTT 58.521 36.000 0.00 0.00 0.00 2.17
2609 4041 6.058553 TCTCTTGACATTCTCCACATGATT 57.941 37.500 0.00 0.00 0.00 2.57
2610 4042 5.688814 TCTCTTGACATTCTCCACATGAT 57.311 39.130 0.00 0.00 0.00 2.45
2611 4043 5.425630 CATCTCTTGACATTCTCCACATGA 58.574 41.667 0.00 0.00 0.00 3.07
2612 4044 4.575236 CCATCTCTTGACATTCTCCACATG 59.425 45.833 0.00 0.00 0.00 3.21
2613 4045 4.778579 CCATCTCTTGACATTCTCCACAT 58.221 43.478 0.00 0.00 0.00 3.21
2614 4046 3.620719 GCCATCTCTTGACATTCTCCACA 60.621 47.826 0.00 0.00 0.00 4.17
2615 4047 2.941720 GCCATCTCTTGACATTCTCCAC 59.058 50.000 0.00 0.00 0.00 4.02
2616 4048 2.419159 CGCCATCTCTTGACATTCTCCA 60.419 50.000 0.00 0.00 0.00 3.86
2617 4049 2.208431 CGCCATCTCTTGACATTCTCC 58.792 52.381 0.00 0.00 0.00 3.71
2618 4050 2.208431 CCGCCATCTCTTGACATTCTC 58.792 52.381 0.00 0.00 0.00 2.87
2619 4051 1.134280 CCCGCCATCTCTTGACATTCT 60.134 52.381 0.00 0.00 0.00 2.40
2620 4052 1.303309 CCCGCCATCTCTTGACATTC 58.697 55.000 0.00 0.00 0.00 2.67
2621 4053 0.107017 CCCCGCCATCTCTTGACATT 60.107 55.000 0.00 0.00 0.00 2.71
2622 4054 1.274703 ACCCCGCCATCTCTTGACAT 61.275 55.000 0.00 0.00 0.00 3.06
2623 4055 0.616395 TACCCCGCCATCTCTTGACA 60.616 55.000 0.00 0.00 0.00 3.58
2624 4056 0.105039 CTACCCCGCCATCTCTTGAC 59.895 60.000 0.00 0.00 0.00 3.18
2625 4057 0.032515 TCTACCCCGCCATCTCTTGA 60.033 55.000 0.00 0.00 0.00 3.02
2626 4058 0.105039 GTCTACCCCGCCATCTCTTG 59.895 60.000 0.00 0.00 0.00 3.02
2627 4059 1.049289 GGTCTACCCCGCCATCTCTT 61.049 60.000 0.00 0.00 0.00 2.85
2628 4060 1.457831 GGTCTACCCCGCCATCTCT 60.458 63.158 0.00 0.00 0.00 3.10
2629 4061 2.857744 CGGTCTACCCCGCCATCTC 61.858 68.421 0.00 0.00 41.78 2.75
2630 4062 2.838225 CGGTCTACCCCGCCATCT 60.838 66.667 0.00 0.00 41.78 2.90
2637 4069 2.773993 TGTCAAATTCGGTCTACCCC 57.226 50.000 0.00 0.00 0.00 4.95
2638 4070 2.943033 CCATGTCAAATTCGGTCTACCC 59.057 50.000 0.00 0.00 0.00 3.69
2639 4071 2.943033 CCCATGTCAAATTCGGTCTACC 59.057 50.000 0.00 0.00 0.00 3.18
2640 4072 3.869065 TCCCATGTCAAATTCGGTCTAC 58.131 45.455 0.00 0.00 0.00 2.59
2641 4073 3.118408 CCTCCCATGTCAAATTCGGTCTA 60.118 47.826 0.00 0.00 0.00 2.59
2642 4074 2.356125 CCTCCCATGTCAAATTCGGTCT 60.356 50.000 0.00 0.00 0.00 3.85
2643 4075 2.017049 CCTCCCATGTCAAATTCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
2644 4076 1.633432 TCCTCCCATGTCAAATTCGGT 59.367 47.619 0.00 0.00 0.00 4.69
2645 4077 2.292267 CTCCTCCCATGTCAAATTCGG 58.708 52.381 0.00 0.00 0.00 4.30
2646 4078 2.939103 GACTCCTCCCATGTCAAATTCG 59.061 50.000 0.00 0.00 0.00 3.34
2647 4079 3.282885 GGACTCCTCCCATGTCAAATTC 58.717 50.000 0.00 0.00 32.84 2.17
2648 4080 2.356125 CGGACTCCTCCCATGTCAAATT 60.356 50.000 0.00 0.00 31.93 1.82
2649 4081 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.00 31.93 2.32
2650 4082 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
2651 4083 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
2652 4084 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
2653 4085 0.613777 AAACGGACTCCTCCCATGTC 59.386 55.000 0.00 0.00 31.93 3.06
2654 4086 1.831736 CTAAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
2655 4087 2.101582 CTCTAAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
2656 4088 2.024273 TCTCTAAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
2657 4089 1.356738 TCTCTAAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
2658 4090 2.025898 CTCTCTAAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
2659 4091 2.684374 GTCTCTCTAAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
2660 4092 2.684374 GGTCTCTCTAAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
2661 4093 2.309458 AGGTCTCTCTAAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
2662 4094 2.424246 CAGGTCTCTCTAAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
2663 4095 3.345414 TCAGGTCTCTCTAAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
2664 4096 3.436577 TCAGGTCTCTCTAAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
2665 4097 3.119424 CCTTCAGGTCTCTCTAAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
2666 4098 3.090037 CCTTCAGGTCTCTCTAAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
2667 4099 3.090037 TCCTTCAGGTCTCTCTAAACGG 58.910 50.000 0.00 0.00 36.34 4.44
2668 4100 4.993029 ATCCTTCAGGTCTCTCTAAACG 57.007 45.455 0.00 0.00 36.34 3.60
2669 4101 5.187967 TCCAATCCTTCAGGTCTCTCTAAAC 59.812 44.000 0.00 0.00 36.34 2.01
2670 4102 5.342017 TCCAATCCTTCAGGTCTCTCTAAA 58.658 41.667 0.00 0.00 36.34 1.85
2671 4103 4.947883 TCCAATCCTTCAGGTCTCTCTAA 58.052 43.478 0.00 0.00 36.34 2.10
2672 4104 4.017037 ACTCCAATCCTTCAGGTCTCTCTA 60.017 45.833 0.00 0.00 36.34 2.43
2673 4105 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
2674 4106 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
2675 4107 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
2676 4108 4.651503 TGATACTCCAATCCTTCAGGTCTC 59.348 45.833 0.00 0.00 36.34 3.36
2677 4109 4.407296 GTGATACTCCAATCCTTCAGGTCT 59.593 45.833 0.00 0.00 36.34 3.85
2678 4110 4.443598 GGTGATACTCCAATCCTTCAGGTC 60.444 50.000 0.00 0.00 36.34 3.85
2679 4111 3.456277 GGTGATACTCCAATCCTTCAGGT 59.544 47.826 0.00 0.00 36.34 4.00
2680 4112 3.455910 TGGTGATACTCCAATCCTTCAGG 59.544 47.826 0.00 0.00 31.50 3.86
2681 4113 4.760530 TGGTGATACTCCAATCCTTCAG 57.239 45.455 0.00 0.00 31.50 3.02
2682 4114 5.250543 TCTTTGGTGATACTCCAATCCTTCA 59.749 40.000 6.20 0.00 43.25 3.02
2683 4115 5.745227 TCTTTGGTGATACTCCAATCCTTC 58.255 41.667 6.20 0.00 43.25 3.46
2684 4116 5.749462 CTCTTTGGTGATACTCCAATCCTT 58.251 41.667 6.20 0.00 43.25 3.36
2685 4117 4.384647 GCTCTTTGGTGATACTCCAATCCT 60.385 45.833 6.20 0.00 43.25 3.24
2686 4118 3.879892 GCTCTTTGGTGATACTCCAATCC 59.120 47.826 6.20 0.00 43.25 3.01
2687 4119 4.775236 AGCTCTTTGGTGATACTCCAATC 58.225 43.478 6.20 0.00 43.25 2.67
2688 4120 4.851639 AGCTCTTTGGTGATACTCCAAT 57.148 40.909 6.20 0.00 43.25 3.16
2689 4121 4.383118 GCTAGCTCTTTGGTGATACTCCAA 60.383 45.833 7.70 0.00 42.29 3.53
2690 4122 3.133003 GCTAGCTCTTTGGTGATACTCCA 59.867 47.826 7.70 0.00 0.00 3.86
2691 4123 3.386402 AGCTAGCTCTTTGGTGATACTCC 59.614 47.826 12.68 0.00 0.00 3.85
2692 4124 4.664150 AGCTAGCTCTTTGGTGATACTC 57.336 45.455 12.68 0.00 0.00 2.59
2693 4125 5.011533 CCATAGCTAGCTCTTTGGTGATACT 59.988 44.000 23.26 0.00 32.65 2.12
2694 4126 5.011125 TCCATAGCTAGCTCTTTGGTGATAC 59.989 44.000 27.50 0.00 36.79 2.24
2695 4127 5.011125 GTCCATAGCTAGCTCTTTGGTGATA 59.989 44.000 27.50 14.48 36.79 2.15
2696 4128 3.969976 TCCATAGCTAGCTCTTTGGTGAT 59.030 43.478 27.50 12.14 36.79 3.06
2697 4129 3.133003 GTCCATAGCTAGCTCTTTGGTGA 59.867 47.826 27.50 15.24 36.79 4.02
2698 4130 3.118629 TGTCCATAGCTAGCTCTTTGGTG 60.119 47.826 27.50 16.61 36.79 4.17
2699 4131 3.107601 TGTCCATAGCTAGCTCTTTGGT 58.892 45.455 27.50 8.05 36.79 3.67
2700 4132 3.494048 CCTGTCCATAGCTAGCTCTTTGG 60.494 52.174 23.26 24.37 36.78 3.28
2701 4133 3.494048 CCCTGTCCATAGCTAGCTCTTTG 60.494 52.174 23.26 16.78 0.00 2.77
2702 4134 2.703007 CCCTGTCCATAGCTAGCTCTTT 59.297 50.000 23.26 4.57 0.00 2.52
2703 4135 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
2704 4136 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
2705 4137 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
2706 4138 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
2707 4139 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
2708 4140 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
2709 4141 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
2710 4142 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2711 4143 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2712 4144 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2713 4145 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2714 4146 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2716 4148 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2717 4149 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2718 4150 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2719 4151 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2720 4152 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2721 4153 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2722 4154 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2723 4155 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2724 4156 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2725 4157 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2726 4158 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2727 4159 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2728 4160 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2729 4161 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2730 4162 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2731 4163 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2732 4164 1.396653 GGCACATGGATAGCAAGCTT 58.603 50.000 0.00 0.00 0.00 3.74
2733 4165 0.466922 GGGCACATGGATAGCAAGCT 60.467 55.000 0.00 0.00 0.00 3.74
2734 4166 1.789078 CGGGCACATGGATAGCAAGC 61.789 60.000 0.00 0.00 0.00 4.01
2735 4167 0.179048 TCGGGCACATGGATAGCAAG 60.179 55.000 0.00 0.00 0.00 4.01
2736 4168 0.179048 CTCGGGCACATGGATAGCAA 60.179 55.000 0.00 0.00 0.00 3.91
2737 4169 1.447217 CTCGGGCACATGGATAGCA 59.553 57.895 0.00 0.00 0.00 3.49
2738 4170 1.963338 GCTCGGGCACATGGATAGC 60.963 63.158 0.00 0.00 38.54 2.97
2739 4171 1.302033 GGCTCGGGCACATGGATAG 60.302 63.158 10.74 0.00 40.87 2.08
2740 4172 1.418097 ATGGCTCGGGCACATGGATA 61.418 55.000 10.74 0.00 41.84 2.59
2741 4173 2.760378 ATGGCTCGGGCACATGGAT 61.760 57.895 10.74 0.00 41.84 3.41
2742 4174 3.410628 ATGGCTCGGGCACATGGA 61.411 61.111 10.74 0.00 41.84 3.41
2743 4175 3.214123 CATGGCTCGGGCACATGG 61.214 66.667 23.37 10.54 41.84 3.66
2744 4176 2.124612 TCATGGCTCGGGCACATG 60.125 61.111 24.48 24.48 41.84 3.21
2745 4177 2.191375 CTCATGGCTCGGGCACAT 59.809 61.111 10.74 7.61 41.84 3.21
2746 4178 2.894257 AACTCATGGCTCGGGCACA 61.894 57.895 10.74 5.03 41.84 4.57
2747 4179 2.045926 AACTCATGGCTCGGGCAC 60.046 61.111 10.74 0.00 41.84 5.01
2748 4180 2.046023 CAACTCATGGCTCGGGCA 60.046 61.111 10.74 6.05 43.52 5.36
2749 4181 2.825836 CCAACTCATGGCTCGGGC 60.826 66.667 0.00 0.00 43.80 6.13
2757 4189 1.800805 ACTCTCGCAACCAACTCATG 58.199 50.000 0.00 0.00 0.00 3.07
2758 4190 2.550830 AACTCTCGCAACCAACTCAT 57.449 45.000 0.00 0.00 0.00 2.90
2759 4191 2.325583 AAACTCTCGCAACCAACTCA 57.674 45.000 0.00 0.00 0.00 3.41
2760 4192 3.125316 CCATAAACTCTCGCAACCAACTC 59.875 47.826 0.00 0.00 0.00 3.01
2761 4193 3.074412 CCATAAACTCTCGCAACCAACT 58.926 45.455 0.00 0.00 0.00 3.16
2762 4194 2.161609 CCCATAAACTCTCGCAACCAAC 59.838 50.000 0.00 0.00 0.00 3.77
2763 4195 2.224670 ACCCATAAACTCTCGCAACCAA 60.225 45.455 0.00 0.00 0.00 3.67
2764 4196 1.349688 ACCCATAAACTCTCGCAACCA 59.650 47.619 0.00 0.00 0.00 3.67
2765 4197 2.109425 ACCCATAAACTCTCGCAACC 57.891 50.000 0.00 0.00 0.00 3.77
2766 4198 3.500680 TGAAACCCATAAACTCTCGCAAC 59.499 43.478 0.00 0.00 0.00 4.17
2767 4199 3.500680 GTGAAACCCATAAACTCTCGCAA 59.499 43.478 0.00 0.00 0.00 4.85
2768 4200 3.071479 GTGAAACCCATAAACTCTCGCA 58.929 45.455 0.00 0.00 0.00 5.10
2769 4201 3.741805 GTGAAACCCATAAACTCTCGC 57.258 47.619 0.00 0.00 0.00 5.03
2783 4215 1.923899 GCGTAGGCTAGAGGTGAAAC 58.076 55.000 0.00 0.00 35.83 2.78
2803 4235 3.070015 AGCCTTCAGTCCCAAACAAATTG 59.930 43.478 0.00 0.00 38.84 2.32
2804 4236 3.070015 CAGCCTTCAGTCCCAAACAAATT 59.930 43.478 0.00 0.00 0.00 1.82
2805 4237 2.629617 CAGCCTTCAGTCCCAAACAAAT 59.370 45.455 0.00 0.00 0.00 2.32
2806 4238 2.031120 CAGCCTTCAGTCCCAAACAAA 58.969 47.619 0.00 0.00 0.00 2.83
2807 4239 1.064017 ACAGCCTTCAGTCCCAAACAA 60.064 47.619 0.00 0.00 0.00 2.83
2808 4240 0.550914 ACAGCCTTCAGTCCCAAACA 59.449 50.000 0.00 0.00 0.00 2.83
2809 4241 0.954452 CACAGCCTTCAGTCCCAAAC 59.046 55.000 0.00 0.00 0.00 2.93
2810 4242 0.550914 ACACAGCCTTCAGTCCCAAA 59.449 50.000 0.00 0.00 0.00 3.28
2811 4243 0.550914 AACACAGCCTTCAGTCCCAA 59.449 50.000 0.00 0.00 0.00 4.12
2812 4244 0.179020 CAACACAGCCTTCAGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2813 4245 0.179018 ACAACACAGCCTTCAGTCCC 60.179 55.000 0.00 0.00 0.00 4.46
2814 4246 1.334869 CAACAACACAGCCTTCAGTCC 59.665 52.381 0.00 0.00 0.00 3.85
2815 4247 2.017049 ACAACAACACAGCCTTCAGTC 58.983 47.619 0.00 0.00 0.00 3.51
2816 4248 2.128771 ACAACAACACAGCCTTCAGT 57.871 45.000 0.00 0.00 0.00 3.41
2817 4249 2.164219 ACAACAACAACACAGCCTTCAG 59.836 45.455 0.00 0.00 0.00 3.02
2818 4250 2.166829 ACAACAACAACACAGCCTTCA 58.833 42.857 0.00 0.00 0.00 3.02
2819 4251 2.923020 CAACAACAACAACACAGCCTTC 59.077 45.455 0.00 0.00 0.00 3.46
2820 4252 2.353605 CCAACAACAACAACACAGCCTT 60.354 45.455 0.00 0.00 0.00 4.35
2821 4253 1.204467 CCAACAACAACAACACAGCCT 59.796 47.619 0.00 0.00 0.00 4.58
2822 4254 1.067213 ACCAACAACAACAACACAGCC 60.067 47.619 0.00 0.00 0.00 4.85
2823 4255 2.362169 ACCAACAACAACAACACAGC 57.638 45.000 0.00 0.00 0.00 4.40
2824 4256 6.201044 TGTTAAAACCAACAACAACAACACAG 59.799 34.615 0.00 0.00 35.53 3.66
2825 4257 6.046593 TGTTAAAACCAACAACAACAACACA 58.953 32.000 0.00 0.00 35.53 3.72
2826 4258 6.526566 TGTTAAAACCAACAACAACAACAC 57.473 33.333 0.00 0.00 35.53 3.32
2827 4259 7.548196 TTTGTTAAAACCAACAACAACAACA 57.452 28.000 1.12 0.00 45.52 3.33
2828 4260 8.836959 TTTTTGTTAAAACCAACAACAACAAC 57.163 26.923 1.12 0.00 45.52 3.32
2893 4327 8.158025 TCCCTCCTTAACTAATTCTTTCATCA 57.842 34.615 0.00 0.00 0.00 3.07
3045 4508 4.161377 TCAGGGACAATGATCATGTTACGA 59.839 41.667 9.46 0.00 0.00 3.43
3189 4652 1.307170 ACCAATACCGGGCCTACCA 60.307 57.895 6.32 0.00 40.22 3.25
3472 4937 7.622672 GCCAATCAAAAAGTGTGCATTTCATAG 60.623 37.037 0.00 0.00 0.00 2.23
3476 4942 4.272991 TGCCAATCAAAAAGTGTGCATTTC 59.727 37.500 0.00 0.00 0.00 2.17
3521 4987 4.209538 CCATCAGATGGCCATTTTGAGTA 58.790 43.478 27.48 13.55 44.70 2.59
3562 5028 6.312399 TCAAAACGATGTTATCACAAAGCT 57.688 33.333 0.00 0.00 36.16 3.74
3589 5060 1.609239 CCAAGGCTACATGGGCTGA 59.391 57.895 11.62 0.00 41.94 4.26
3606 5079 7.728847 AAAAATCAGATACAAAGCAAAACCC 57.271 32.000 0.00 0.00 0.00 4.11
3662 5155 6.359087 GCGTAACCGAGTATGAATAGTAACAG 59.641 42.308 0.00 0.00 35.63 3.16
3678 5171 0.818938 TAGCTTGATGGCGTAACCGA 59.181 50.000 0.00 0.00 43.94 4.69
3680 5173 2.311124 ACTAGCTTGATGGCGTAACC 57.689 50.000 1.04 0.00 37.29 2.85
3686 5179 4.622701 AATCGAAAACTAGCTTGATGGC 57.377 40.909 1.04 0.00 0.00 4.40
3693 5186 4.946784 ATGCGAAAATCGAAAACTAGCT 57.053 36.364 3.61 0.00 43.74 3.32
3704 5197 6.214205 ACACAACAAATCAATGCGAAAATC 57.786 33.333 0.00 0.00 0.00 2.17
3711 5204 5.633182 ACCGATTTACACAACAAATCAATGC 59.367 36.000 8.14 0.00 40.76 3.56
3732 5273 2.226200 TCATTGTGCTCAATTCACACCG 59.774 45.455 11.19 0.00 43.32 4.94
3736 5277 5.049198 TCTGAGTTCATTGTGCTCAATTCAC 60.049 40.000 11.19 10.53 41.66 3.18
3750 5291 9.566432 AAAACTGAGTTATCTTTCTGAGTTCAT 57.434 29.630 0.00 0.00 37.20 2.57
3752 5293 9.267084 AGAAAACTGAGTTATCTTTCTGAGTTC 57.733 33.333 8.70 0.83 37.20 3.01
3883 5428 3.458118 CCAAGATACTGTGGGGTTATGGA 59.542 47.826 0.00 0.00 0.00 3.41
3938 5483 4.651962 TGGTTGATAGATACCGTTGATGGA 59.348 41.667 0.00 0.00 37.23 3.41
3981 5526 3.026694 GTCACGTACCCCTTACACCTAT 58.973 50.000 0.00 0.00 0.00 2.57
3982 5527 2.446435 GTCACGTACCCCTTACACCTA 58.554 52.381 0.00 0.00 0.00 3.08
3983 5528 1.260544 GTCACGTACCCCTTACACCT 58.739 55.000 0.00 0.00 0.00 4.00
3984 5529 0.247460 GGTCACGTACCCCTTACACC 59.753 60.000 0.00 0.00 43.16 4.16
3985 5530 3.820595 GGTCACGTACCCCTTACAC 57.179 57.895 0.00 0.00 43.16 2.90
4070 5990 4.396478 GCTATTCCTCAAACTCCAAACTCC 59.604 45.833 0.00 0.00 0.00 3.85
4071 5991 5.003804 TGCTATTCCTCAAACTCCAAACTC 58.996 41.667 0.00 0.00 0.00 3.01
4072 5992 4.762251 GTGCTATTCCTCAAACTCCAAACT 59.238 41.667 0.00 0.00 0.00 2.66
4073 5993 4.082733 GGTGCTATTCCTCAAACTCCAAAC 60.083 45.833 0.00 0.00 0.00 2.93
4074 5994 4.079253 GGTGCTATTCCTCAAACTCCAAA 58.921 43.478 0.00 0.00 0.00 3.28
4075 5995 3.686016 GGTGCTATTCCTCAAACTCCAA 58.314 45.455 0.00 0.00 0.00 3.53
4076 5996 2.354704 CGGTGCTATTCCTCAAACTCCA 60.355 50.000 0.00 0.00 0.00 3.86
4077 5997 2.280628 CGGTGCTATTCCTCAAACTCC 58.719 52.381 0.00 0.00 0.00 3.85
4096 6016 9.340695 ACATGAACATTTACATGAACATTTACG 57.659 29.630 12.90 0.00 44.28 3.18
4129 6049 8.811017 ACTGGATGGTTGATGTATTAGATAGAG 58.189 37.037 0.00 0.00 0.00 2.43
4130 6050 8.727100 ACTGGATGGTTGATGTATTAGATAGA 57.273 34.615 0.00 0.00 0.00 1.98
4133 6053 9.331466 AGATACTGGATGGTTGATGTATTAGAT 57.669 33.333 0.00 0.00 0.00 1.98
4134 6054 8.727100 AGATACTGGATGGTTGATGTATTAGA 57.273 34.615 0.00 0.00 0.00 2.10
4210 6145 2.544685 CTTTGAGGGTGTGCTATCTCG 58.455 52.381 0.00 0.00 0.00 4.04
4219 6154 1.915141 CATTCTGCCTTTGAGGGTGT 58.085 50.000 0.00 0.00 35.37 4.16
4220 6155 0.529378 GCATTCTGCCTTTGAGGGTG 59.471 55.000 0.00 0.00 37.42 4.61
4221 6156 0.112995 TGCATTCTGCCTTTGAGGGT 59.887 50.000 0.00 0.00 44.23 4.34
4222 6157 0.529378 GTGCATTCTGCCTTTGAGGG 59.471 55.000 0.00 0.00 44.23 4.30
4223 6158 0.529378 GGTGCATTCTGCCTTTGAGG 59.471 55.000 0.00 0.00 44.23 3.86
4224 6159 0.169672 CGGTGCATTCTGCCTTTGAG 59.830 55.000 0.00 0.00 44.23 3.02
4225 6160 2.256391 CGGTGCATTCTGCCTTTGA 58.744 52.632 0.00 0.00 44.23 2.69
4226 6161 4.874534 CGGTGCATTCTGCCTTTG 57.125 55.556 0.00 0.00 44.23 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.