Multiple sequence alignment - TraesCS2A01G238800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G238800 chr2A 100.000 3300 0 0 1 3300 324286742 324290041 0.000000e+00 6095.0
1 TraesCS2A01G238800 chr2D 97.635 1607 22 7 926 2523 218387083 218385484 0.000000e+00 2743.0
2 TraesCS2A01G238800 chr2D 94.087 389 8 2 2705 3093 218379716 218379343 7.940000e-161 577.0
3 TraesCS2A01G238800 chr2D 96.825 189 6 0 2522 2710 218385390 218385202 1.910000e-82 316.0
4 TraesCS2A01G238800 chr2B 95.833 864 22 4 905 1760 331247568 331246711 0.000000e+00 1384.0
5 TraesCS2A01G238800 chr2B 95.986 573 15 2 2522 3093 331245241 331244676 0.000000e+00 924.0
6 TraesCS2A01G238800 chr2B 97.765 537 11 1 1791 2326 331246182 331245646 0.000000e+00 924.0
7 TraesCS2A01G238800 chr2B 93.500 200 13 0 2324 2523 331245485 331245286 6.920000e-77 298.0
8 TraesCS2A01G238800 chrUn 97.115 208 6 0 3093 3300 433705914 433705707 5.240000e-93 351.0
9 TraesCS2A01G238800 chr7A 97.115 208 6 0 3093 3300 714723953 714723746 5.240000e-93 351.0
10 TraesCS2A01G238800 chr3A 97.115 208 6 0 3093 3300 16250223 16250430 5.240000e-93 351.0
11 TraesCS2A01G238800 chr3A 96.635 208 7 0 3093 3300 16248597 16248804 2.440000e-91 346.0
12 TraesCS2A01G238800 chr5A 96.667 210 7 0 3091 3300 480515799 480515590 1.880000e-92 350.0
13 TraesCS2A01G238800 chr5A 96.667 210 7 0 3091 3300 496612493 496612702 1.880000e-92 350.0
14 TraesCS2A01G238800 chr5A 96.635 208 7 0 3093 3300 7025274 7025481 2.440000e-91 346.0
15 TraesCS2A01G238800 chr5A 100.000 28 0 0 2675 2702 481917683 481917656 6.000000e-03 52.8
16 TraesCS2A01G238800 chr4A 97.101 207 6 0 3093 3299 3108387 3108181 1.880000e-92 350.0
17 TraesCS2A01G238800 chr4A 96.667 210 7 0 3091 3300 354397353 354397144 1.880000e-92 350.0
18 TraesCS2A01G238800 chr4A 84.000 75 10 2 2638 2712 578766371 578766299 1.640000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G238800 chr2A 324286742 324290041 3299 False 6095.0 6095 100.000 1 3300 1 chr2A.!!$F1 3299
1 TraesCS2A01G238800 chr2D 218385202 218387083 1881 True 1529.5 2743 97.230 926 2710 2 chr2D.!!$R2 1784
2 TraesCS2A01G238800 chr2B 331244676 331247568 2892 True 882.5 1384 95.771 905 3093 4 chr2B.!!$R1 2188
3 TraesCS2A01G238800 chr3A 16248597 16250430 1833 False 348.5 351 96.875 3093 3300 2 chr3A.!!$F1 207

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
517 518 0.031449 GCGAGTAGGATCTCAGCCAC 59.969 60.0 0.0 0.0 34.46 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2391 3065 4.754322 TGAAGCACTTCGTCTTGCATATA 58.246 39.13 5.95 0.0 42.28 0.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.868757 TGCACTATCATCGGGTATAGC 57.131 47.619 0.00 0.00 0.00 2.97
21 22 3.431415 TGCACTATCATCGGGTATAGCT 58.569 45.455 1.32 0.00 0.00 3.32
23 24 4.082190 TGCACTATCATCGGGTATAGCTTC 60.082 45.833 0.00 0.00 0.00 3.86
24 25 4.082190 GCACTATCATCGGGTATAGCTTCA 60.082 45.833 0.00 0.00 0.00 3.02
26 27 6.038985 CACTATCATCGGGTATAGCTTCATG 58.961 44.000 0.00 2.58 0.00 3.07
27 28 5.952347 ACTATCATCGGGTATAGCTTCATGA 59.048 40.000 0.00 7.48 0.00 3.07
28 29 5.745312 ATCATCGGGTATAGCTTCATGAA 57.255 39.130 8.12 8.12 0.00 2.57
29 30 5.745312 TCATCGGGTATAGCTTCATGAAT 57.255 39.130 8.96 0.00 0.00 2.57
31 32 6.166279 TCATCGGGTATAGCTTCATGAATTC 58.834 40.000 8.96 4.23 0.00 2.17
32 33 5.545063 TCGGGTATAGCTTCATGAATTCA 57.455 39.130 11.26 11.26 0.00 2.57
33 34 5.924356 TCGGGTATAGCTTCATGAATTCAA 58.076 37.500 13.09 0.00 0.00 2.69
34 35 5.758296 TCGGGTATAGCTTCATGAATTCAAC 59.242 40.000 13.09 2.42 0.00 3.18
35 36 5.760253 CGGGTATAGCTTCATGAATTCAACT 59.240 40.000 13.09 7.72 0.00 3.16
36 37 6.260936 CGGGTATAGCTTCATGAATTCAACTT 59.739 38.462 13.09 0.00 0.00 2.66
37 38 7.519008 CGGGTATAGCTTCATGAATTCAACTTC 60.519 40.741 13.09 1.44 0.00 3.01
38 39 7.500559 GGGTATAGCTTCATGAATTCAACTTCT 59.499 37.037 13.09 8.68 0.00 2.85
39 40 8.555361 GGTATAGCTTCATGAATTCAACTTCTC 58.445 37.037 13.09 0.93 0.00 2.87
40 41 5.542616 AGCTTCATGAATTCAACTTCTCG 57.457 39.130 13.09 0.00 0.00 4.04
41 42 4.394300 AGCTTCATGAATTCAACTTCTCGG 59.606 41.667 13.09 0.00 0.00 4.63
42 43 4.393062 GCTTCATGAATTCAACTTCTCGGA 59.607 41.667 13.09 0.00 0.00 4.55
44 45 3.935203 TCATGAATTCAACTTCTCGGAGC 59.065 43.478 13.09 0.00 0.00 4.70
48 49 0.762418 TTCAACTTCTCGGAGCCCAA 59.238 50.000 0.00 0.00 0.00 4.12
49 50 0.762418 TCAACTTCTCGGAGCCCAAA 59.238 50.000 0.00 0.00 0.00 3.28
51 52 1.470098 CAACTTCTCGGAGCCCAAATG 59.530 52.381 0.00 0.00 0.00 2.32
52 53 0.693049 ACTTCTCGGAGCCCAAATGT 59.307 50.000 0.00 0.00 0.00 2.71
55 56 0.391130 TCTCGGAGCCCAAATGTTCG 60.391 55.000 0.00 0.00 0.00 3.95
56 57 1.369091 CTCGGAGCCCAAATGTTCGG 61.369 60.000 0.00 0.00 0.00 4.30
57 58 2.406616 CGGAGCCCAAATGTTCGGG 61.407 63.158 0.00 0.00 46.15 5.14
58 59 1.001393 GGAGCCCAAATGTTCGGGA 60.001 57.895 0.00 0.00 46.34 5.14
59 60 1.313091 GGAGCCCAAATGTTCGGGAC 61.313 60.000 0.00 0.00 46.34 4.46
61 62 0.178975 AGCCCAAATGTTCGGGACAA 60.179 50.000 0.00 0.00 46.34 3.18
62 63 0.894835 GCCCAAATGTTCGGGACAAT 59.105 50.000 0.00 0.00 46.34 2.71
63 64 1.275010 GCCCAAATGTTCGGGACAATT 59.725 47.619 0.00 0.00 46.34 2.32
64 65 2.289382 GCCCAAATGTTCGGGACAATTT 60.289 45.455 0.00 0.00 46.34 1.82
66 67 3.006323 CCCAAATGTTCGGGACAATTTCA 59.994 43.478 0.00 0.00 46.34 2.69
67 68 4.322650 CCCAAATGTTCGGGACAATTTCAT 60.323 41.667 0.00 0.00 46.34 2.57
70 71 3.822594 TGTTCGGGACAATTTCATTCG 57.177 42.857 0.00 0.00 34.69 3.34
72 73 3.058570 TGTTCGGGACAATTTCATTCGTG 60.059 43.478 0.00 0.00 34.69 4.35
73 74 2.080693 TCGGGACAATTTCATTCGTGG 58.919 47.619 0.00 0.00 0.00 4.94
75 76 2.095853 CGGGACAATTTCATTCGTGGAG 59.904 50.000 0.00 0.00 0.00 3.86
76 77 3.081804 GGGACAATTTCATTCGTGGAGT 58.918 45.455 0.00 0.00 0.00 3.85
78 79 4.022329 GGGACAATTTCATTCGTGGAGTTT 60.022 41.667 0.00 0.00 0.00 2.66
79 80 4.917415 GGACAATTTCATTCGTGGAGTTTG 59.083 41.667 0.00 0.00 0.00 2.93
81 82 5.280945 ACAATTTCATTCGTGGAGTTTGTG 58.719 37.500 0.00 0.00 0.00 3.33
82 83 5.067153 ACAATTTCATTCGTGGAGTTTGTGA 59.933 36.000 0.00 0.00 0.00 3.58
84 85 4.811555 TTCATTCGTGGAGTTTGTGAAG 57.188 40.909 0.00 0.00 0.00 3.02
85 86 2.548057 TCATTCGTGGAGTTTGTGAAGC 59.452 45.455 0.00 0.00 0.00 3.86
86 87 1.305201 TTCGTGGAGTTTGTGAAGCC 58.695 50.000 0.00 0.00 0.00 4.35
87 88 0.534203 TCGTGGAGTTTGTGAAGCCC 60.534 55.000 0.00 0.00 0.00 5.19
89 90 1.228124 TGGAGTTTGTGAAGCCCGG 60.228 57.895 0.00 0.00 0.00 5.73
90 91 1.072505 GGAGTTTGTGAAGCCCGGA 59.927 57.895 0.73 0.00 0.00 5.14
92 93 1.578206 GAGTTTGTGAAGCCCGGAGC 61.578 60.000 0.73 4.57 44.25 4.70
102 103 2.685380 CCCGGAGCTGGAGGACTT 60.685 66.667 0.73 0.00 0.00 3.01
103 104 2.726351 CCCGGAGCTGGAGGACTTC 61.726 68.421 0.73 0.00 0.00 3.01
104 105 1.984570 CCGGAGCTGGAGGACTTCA 60.985 63.158 0.00 0.00 0.00 3.02
105 106 1.515020 CGGAGCTGGAGGACTTCAG 59.485 63.158 3.16 3.16 0.00 3.02
106 107 1.904032 GGAGCTGGAGGACTTCAGG 59.096 63.158 9.55 0.00 0.00 3.86
107 108 1.220477 GAGCTGGAGGACTTCAGGC 59.780 63.158 9.55 2.51 0.00 4.85
108 109 2.250741 GAGCTGGAGGACTTCAGGCC 62.251 65.000 9.55 0.00 0.00 5.19
109 110 2.993853 CTGGAGGACTTCAGGCCC 59.006 66.667 0.00 0.00 0.00 5.80
110 111 1.614824 CTGGAGGACTTCAGGCCCT 60.615 63.158 0.00 0.00 0.00 5.19
112 113 0.118346 TGGAGGACTTCAGGCCCTAA 59.882 55.000 0.00 0.00 0.00 2.69
114 115 1.574263 GAGGACTTCAGGCCCTAAGT 58.426 55.000 17.85 17.85 38.62 2.24
115 116 2.626149 GGAGGACTTCAGGCCCTAAGTA 60.626 54.545 17.84 0.00 36.10 2.24
116 117 3.310193 GAGGACTTCAGGCCCTAAGTAT 58.690 50.000 17.84 11.14 36.10 2.12
117 118 3.041946 AGGACTTCAGGCCCTAAGTATG 58.958 50.000 17.84 0.00 36.10 2.39
118 119 2.485657 GGACTTCAGGCCCTAAGTATGC 60.486 54.545 17.84 7.98 36.10 3.14
120 121 2.171448 ACTTCAGGCCCTAAGTATGCAG 59.829 50.000 16.66 1.70 34.23 4.41
121 122 0.469917 TCAGGCCCTAAGTATGCAGC 59.530 55.000 0.00 0.00 0.00 5.25
123 124 0.471617 AGGCCCTAAGTATGCAGCAG 59.528 55.000 0.00 0.00 0.00 4.24
127 128 3.016736 GCCCTAAGTATGCAGCAGAAAA 58.983 45.455 0.00 0.00 0.00 2.29
128 129 3.633986 GCCCTAAGTATGCAGCAGAAAAT 59.366 43.478 0.00 0.00 0.00 1.82
131 132 5.039333 CCTAAGTATGCAGCAGAAAATTGC 58.961 41.667 0.00 0.00 44.41 3.56
137 138 4.475763 TGCAGCAGAAAATTGCAAAATG 57.524 36.364 1.71 0.00 46.47 2.32
138 139 3.231160 GCAGCAGAAAATTGCAAAATGC 58.769 40.909 1.71 9.70 46.47 3.56
152 153 5.359716 GCAAAATGCATTCAACCAAATGA 57.640 34.783 13.38 0.00 44.26 2.57
154 155 6.207213 GCAAAATGCATTCAACCAAATGAAA 58.793 32.000 13.38 0.00 44.26 2.69
155 156 6.696148 GCAAAATGCATTCAACCAAATGAAAA 59.304 30.769 13.38 0.00 44.26 2.29
157 158 8.695284 CAAAATGCATTCAACCAAATGAAAATG 58.305 29.630 13.38 0.00 42.22 2.32
168 169 5.172934 CCAAATGAAAATGGTGATGAGTGG 58.827 41.667 0.00 0.00 31.84 4.00
169 170 5.047164 CCAAATGAAAATGGTGATGAGTGGA 60.047 40.000 0.00 0.00 31.84 4.02
170 171 5.909621 AATGAAAATGGTGATGAGTGGAG 57.090 39.130 0.00 0.00 0.00 3.86
171 172 4.639078 TGAAAATGGTGATGAGTGGAGA 57.361 40.909 0.00 0.00 0.00 3.71
173 174 4.286808 TGAAAATGGTGATGAGTGGAGAGA 59.713 41.667 0.00 0.00 0.00 3.10
174 175 4.916041 AAATGGTGATGAGTGGAGAGAA 57.084 40.909 0.00 0.00 0.00 2.87
177 178 5.804944 ATGGTGATGAGTGGAGAGAATAG 57.195 43.478 0.00 0.00 0.00 1.73
178 179 3.963374 TGGTGATGAGTGGAGAGAATAGG 59.037 47.826 0.00 0.00 0.00 2.57
179 180 3.964031 GGTGATGAGTGGAGAGAATAGGT 59.036 47.826 0.00 0.00 0.00 3.08
180 181 4.038642 GGTGATGAGTGGAGAGAATAGGTC 59.961 50.000 0.00 0.00 0.00 3.85
196 197 1.959042 GGTCACATACCTGCTGGATG 58.041 55.000 17.64 16.32 45.75 3.51
197 198 1.475751 GGTCACATACCTGCTGGATGG 60.476 57.143 17.64 7.09 45.75 3.51
198 199 1.210478 GTCACATACCTGCTGGATGGT 59.790 52.381 17.64 7.72 40.12 3.55
199 200 1.210234 TCACATACCTGCTGGATGGTG 59.790 52.381 17.64 18.25 37.74 4.17
200 201 1.210234 CACATACCTGCTGGATGGTGA 59.790 52.381 17.64 0.00 37.74 4.02
201 202 1.487976 ACATACCTGCTGGATGGTGAG 59.512 52.381 17.64 1.63 37.74 3.51
202 203 1.764723 CATACCTGCTGGATGGTGAGA 59.235 52.381 17.64 0.00 37.74 3.27
203 204 1.489481 TACCTGCTGGATGGTGAGAG 58.511 55.000 17.64 0.00 37.74 3.20
205 206 0.907486 CCTGCTGGATGGTGAGAGAA 59.093 55.000 2.92 0.00 34.57 2.87
206 207 1.134461 CCTGCTGGATGGTGAGAGAAG 60.134 57.143 2.92 0.00 34.57 2.85
207 208 0.907486 TGCTGGATGGTGAGAGAAGG 59.093 55.000 0.00 0.00 0.00 3.46
210 211 2.938756 GCTGGATGGTGAGAGAAGGTTG 60.939 54.545 0.00 0.00 0.00 3.77
211 212 1.630369 TGGATGGTGAGAGAAGGTTGG 59.370 52.381 0.00 0.00 0.00 3.77
212 213 1.065126 GGATGGTGAGAGAAGGTTGGG 60.065 57.143 0.00 0.00 0.00 4.12
213 214 0.329596 ATGGTGAGAGAAGGTTGGGC 59.670 55.000 0.00 0.00 0.00 5.36
214 215 1.376037 GGTGAGAGAAGGTTGGGCG 60.376 63.158 0.00 0.00 0.00 6.13
215 216 2.035442 GTGAGAGAAGGTTGGGCGC 61.035 63.158 0.00 0.00 0.00 6.53
233 234 4.402528 TGCCGCGGTTGTGCCTAT 62.403 61.111 28.70 0.00 34.25 2.57
235 236 1.816259 GCCGCGGTTGTGCCTATTA 60.816 57.895 28.70 0.00 34.25 0.98
236 237 1.772063 GCCGCGGTTGTGCCTATTAG 61.772 60.000 28.70 0.00 34.25 1.73
237 238 0.179094 CCGCGGTTGTGCCTATTAGA 60.179 55.000 19.50 0.00 34.25 2.10
238 239 1.540363 CCGCGGTTGTGCCTATTAGAT 60.540 52.381 19.50 0.00 34.25 1.98
239 240 1.792949 CGCGGTTGTGCCTATTAGATC 59.207 52.381 0.00 0.00 34.25 2.75
240 241 2.801699 CGCGGTTGTGCCTATTAGATCA 60.802 50.000 0.00 0.00 34.25 2.92
241 242 2.802816 GCGGTTGTGCCTATTAGATCAG 59.197 50.000 0.00 0.00 34.25 2.90
243 244 3.181465 CGGTTGTGCCTATTAGATCAGGT 60.181 47.826 0.00 0.00 34.18 4.00
244 245 4.038763 CGGTTGTGCCTATTAGATCAGGTA 59.961 45.833 0.00 0.00 34.18 3.08
245 246 5.542779 GGTTGTGCCTATTAGATCAGGTAG 58.457 45.833 0.00 0.00 34.18 3.18
246 247 5.511545 GGTTGTGCCTATTAGATCAGGTAGG 60.512 48.000 11.08 11.08 37.38 3.18
247 248 4.160329 TGTGCCTATTAGATCAGGTAGGG 58.840 47.826 15.09 3.80 35.36 3.53
248 249 3.515901 GTGCCTATTAGATCAGGTAGGGG 59.484 52.174 15.09 2.51 35.36 4.79
249 250 3.404769 TGCCTATTAGATCAGGTAGGGGA 59.595 47.826 15.09 1.60 35.36 4.81
250 251 4.027437 GCCTATTAGATCAGGTAGGGGAG 58.973 52.174 15.09 0.00 35.36 4.30
251 252 4.615513 CCTATTAGATCAGGTAGGGGAGG 58.384 52.174 0.00 0.00 31.99 4.30
252 253 3.569135 ATTAGATCAGGTAGGGGAGGG 57.431 52.381 0.00 0.00 0.00 4.30
253 254 2.240467 TAGATCAGGTAGGGGAGGGA 57.760 55.000 0.00 0.00 0.00 4.20
254 255 0.563672 AGATCAGGTAGGGGAGGGAC 59.436 60.000 0.00 0.00 0.00 4.46
255 256 0.472161 GATCAGGTAGGGGAGGGACC 60.472 65.000 0.00 0.00 38.08 4.46
256 257 1.236026 ATCAGGTAGGGGAGGGACCA 61.236 60.000 0.00 0.00 41.20 4.02
257 258 1.236026 TCAGGTAGGGGAGGGACCAT 61.236 60.000 0.00 0.00 41.20 3.55
258 259 1.056700 CAGGTAGGGGAGGGACCATG 61.057 65.000 0.00 0.00 41.20 3.66
259 260 1.770518 GGTAGGGGAGGGACCATGG 60.771 68.421 11.19 11.19 41.20 3.66
260 261 1.770518 GTAGGGGAGGGACCATGGG 60.771 68.421 18.09 0.00 41.20 4.00
261 262 3.731886 TAGGGGAGGGACCATGGGC 62.732 68.421 18.09 14.45 41.20 5.36
264 265 4.176752 GGAGGGACCATGGGCGTC 62.177 72.222 18.09 13.40 38.79 5.19
269 270 3.845259 GACCATGGGCGTCCGCTA 61.845 66.667 18.09 1.78 41.60 4.26
270 271 3.792053 GACCATGGGCGTCCGCTAG 62.792 68.421 18.09 0.00 41.60 3.42
271 272 4.609018 CCATGGGCGTCCGCTAGG 62.609 72.222 11.82 0.00 41.60 3.02
278 279 3.760035 CGTCCGCTAGGCTGGTGT 61.760 66.667 10.62 0.00 37.47 4.16
279 280 2.125512 GTCCGCTAGGCTGGTGTG 60.126 66.667 10.62 2.50 37.47 3.82
280 281 3.390521 TCCGCTAGGCTGGTGTGG 61.391 66.667 10.62 9.90 37.47 4.17
282 283 4.473520 CGCTAGGCTGGTGTGGGG 62.474 72.222 2.91 0.00 0.00 4.96
283 284 3.009115 GCTAGGCTGGTGTGGGGA 61.009 66.667 0.00 0.00 0.00 4.81
284 285 3.036429 GCTAGGCTGGTGTGGGGAG 62.036 68.421 0.00 0.00 0.00 4.30
285 286 1.306141 CTAGGCTGGTGTGGGGAGA 60.306 63.158 0.00 0.00 0.00 3.71
286 287 1.306141 TAGGCTGGTGTGGGGAGAG 60.306 63.158 0.00 0.00 0.00 3.20
288 289 2.664081 GGCTGGTGTGGGGAGAGAG 61.664 68.421 0.00 0.00 0.00 3.20
289 290 1.610673 GCTGGTGTGGGGAGAGAGA 60.611 63.158 0.00 0.00 0.00 3.10
290 291 1.612395 GCTGGTGTGGGGAGAGAGAG 61.612 65.000 0.00 0.00 0.00 3.20
291 292 1.610673 TGGTGTGGGGAGAGAGAGC 60.611 63.158 0.00 0.00 0.00 4.09
292 293 1.610673 GGTGTGGGGAGAGAGAGCA 60.611 63.158 0.00 0.00 0.00 4.26
293 294 1.612395 GGTGTGGGGAGAGAGAGCAG 61.612 65.000 0.00 0.00 0.00 4.24
294 295 0.902516 GTGTGGGGAGAGAGAGCAGT 60.903 60.000 0.00 0.00 0.00 4.40
295 296 0.902048 TGTGGGGAGAGAGAGCAGTG 60.902 60.000 0.00 0.00 0.00 3.66
296 297 0.902516 GTGGGGAGAGAGAGCAGTGT 60.903 60.000 0.00 0.00 0.00 3.55
297 298 0.902048 TGGGGAGAGAGAGCAGTGTG 60.902 60.000 0.00 0.00 0.00 3.82
298 299 1.217779 GGGAGAGAGAGCAGTGTGC 59.782 63.158 0.00 0.00 45.46 4.57
299 300 1.217779 GGAGAGAGAGCAGTGTGCC 59.782 63.158 0.00 0.00 46.52 5.01
300 301 1.539560 GGAGAGAGAGCAGTGTGCCA 61.540 60.000 0.00 0.00 46.52 4.92
301 302 0.389687 GAGAGAGAGCAGTGTGCCAC 60.390 60.000 0.00 0.00 46.52 5.01
302 303 1.375268 GAGAGAGCAGTGTGCCACC 60.375 63.158 0.00 0.00 46.52 4.61
303 304 2.740055 GAGAGCAGTGTGCCACCG 60.740 66.667 0.00 0.00 46.52 4.94
357 358 2.412112 CTCCGCGCCCTACACTAC 59.588 66.667 0.00 0.00 0.00 2.73
358 359 3.135056 CTCCGCGCCCTACACTACC 62.135 68.421 0.00 0.00 0.00 3.18
359 360 4.564116 CCGCGCCCTACACTACCG 62.564 72.222 0.00 0.00 0.00 4.02
360 361 4.564116 CGCGCCCTACACTACCGG 62.564 72.222 0.00 0.00 0.00 5.28
361 362 3.455469 GCGCCCTACACTACCGGT 61.455 66.667 13.98 13.98 0.00 5.28
362 363 2.803479 CGCCCTACACTACCGGTC 59.197 66.667 12.40 0.00 0.00 4.79
365 366 1.315257 GCCCTACACTACCGGTCGAA 61.315 60.000 12.40 0.00 0.00 3.71
367 368 1.679944 CCCTACACTACCGGTCGAAGA 60.680 57.143 12.40 0.00 0.00 2.87
368 369 1.669779 CCTACACTACCGGTCGAAGAG 59.330 57.143 12.40 4.71 36.95 2.85
369 370 2.625737 CTACACTACCGGTCGAAGAGA 58.374 52.381 12.40 0.00 36.95 3.10
370 371 1.451067 ACACTACCGGTCGAAGAGAG 58.549 55.000 12.40 2.87 36.95 3.20
371 372 0.733729 CACTACCGGTCGAAGAGAGG 59.266 60.000 12.40 0.00 36.95 3.69
372 373 0.394080 ACTACCGGTCGAAGAGAGGG 60.394 60.000 12.40 0.00 38.38 4.30
373 374 1.726533 CTACCGGTCGAAGAGAGGGC 61.727 65.000 12.40 0.00 38.38 5.19
374 375 4.194720 CCGGTCGAAGAGAGGGCG 62.195 72.222 0.00 0.00 36.95 6.13
375 376 3.441290 CGGTCGAAGAGAGGGCGT 61.441 66.667 0.00 0.00 36.95 5.68
376 377 2.490685 GGTCGAAGAGAGGGCGTC 59.509 66.667 0.00 0.00 36.95 5.19
377 378 2.100603 GTCGAAGAGAGGGCGTCG 59.899 66.667 0.96 0.00 40.33 5.12
379 380 4.194720 CGAAGAGAGGGCGTCGGG 62.195 72.222 0.96 0.00 36.39 5.14
380 381 3.069318 GAAGAGAGGGCGTCGGGT 61.069 66.667 0.96 0.00 0.00 5.28
381 382 3.066233 GAAGAGAGGGCGTCGGGTC 62.066 68.421 0.96 0.00 0.00 4.46
400 401 4.868116 ACGGCGCACCACCACTTT 62.868 61.111 10.83 0.00 34.57 2.66
401 402 4.025401 CGGCGCACCACCACTTTC 62.025 66.667 10.83 0.00 34.57 2.62
402 403 2.594592 GGCGCACCACCACTTTCT 60.595 61.111 10.83 0.00 35.26 2.52
404 405 1.733526 GCGCACCACCACTTTCTTT 59.266 52.632 0.30 0.00 0.00 2.52
405 406 0.317854 GCGCACCACCACTTTCTTTC 60.318 55.000 0.30 0.00 0.00 2.62
406 407 0.041312 CGCACCACCACTTTCTTTCG 60.041 55.000 0.00 0.00 0.00 3.46
407 408 0.317854 GCACCACCACTTTCTTTCGC 60.318 55.000 0.00 0.00 0.00 4.70
409 410 1.264288 CACCACCACTTTCTTTCGCTC 59.736 52.381 0.00 0.00 0.00 5.03
410 411 0.512952 CCACCACTTTCTTTCGCTCG 59.487 55.000 0.00 0.00 0.00 5.03
412 413 0.602905 ACCACTTTCTTTCGCTCGGG 60.603 55.000 0.00 0.00 0.00 5.14
414 415 0.512952 CACTTTCTTTCGCTCGGGTG 59.487 55.000 0.00 0.00 0.00 4.61
416 417 1.912371 CTTTCTTTCGCTCGGGTGGC 61.912 60.000 0.00 0.00 0.00 5.01
433 434 4.227134 CGCAGGGAGGGACCGATG 62.227 72.222 0.00 0.00 40.11 3.84
434 435 3.866582 GCAGGGAGGGACCGATGG 61.867 72.222 0.00 0.00 40.11 3.51
439 440 3.917760 GAGGGACCGATGGGAGCG 61.918 72.222 0.00 0.00 36.97 5.03
440 441 4.458829 AGGGACCGATGGGAGCGA 62.459 66.667 0.00 0.00 36.97 4.93
442 443 4.222847 GGACCGATGGGAGCGACC 62.223 72.222 0.00 0.00 36.97 4.79
443 444 3.458163 GACCGATGGGAGCGACCA 61.458 66.667 0.00 4.86 46.24 4.02
445 446 3.461773 CCGATGGGAGCGACCACT 61.462 66.667 4.48 0.00 44.72 4.00
446 447 2.579201 CGATGGGAGCGACCACTT 59.421 61.111 4.48 0.00 44.72 3.16
447 448 1.811266 CGATGGGAGCGACCACTTG 60.811 63.158 4.48 0.00 44.72 3.16
448 449 1.296715 GATGGGAGCGACCACTTGT 59.703 57.895 4.48 0.00 44.72 3.16
449 450 0.741221 GATGGGAGCGACCACTTGTC 60.741 60.000 4.48 0.00 44.72 3.18
451 452 1.374758 GGGAGCGACCACTTGTCAG 60.375 63.158 5.45 0.00 44.71 3.51
452 453 2.029844 GGAGCGACCACTTGTCAGC 61.030 63.158 0.00 0.00 44.71 4.26
454 455 0.243907 GAGCGACCACTTGTCAGCTA 59.756 55.000 10.14 0.00 46.42 3.32
455 456 0.244994 AGCGACCACTTGTCAGCTAG 59.755 55.000 8.96 0.00 45.43 3.42
456 457 0.737715 GCGACCACTTGTCAGCTAGG 60.738 60.000 0.00 0.00 44.71 3.02
457 458 0.108615 CGACCACTTGTCAGCTAGGG 60.109 60.000 0.00 0.00 44.71 3.53
458 459 0.250513 GACCACTTGTCAGCTAGGGG 59.749 60.000 0.63 0.63 44.84 4.79
459 460 0.473886 ACCACTTGTCAGCTAGGGGT 60.474 55.000 2.04 2.04 46.76 4.95
460 461 0.036010 CCACTTGTCAGCTAGGGGTG 60.036 60.000 0.00 0.00 36.48 4.61
462 463 0.473886 ACTTGTCAGCTAGGGGTGGT 60.474 55.000 0.00 0.00 40.89 4.16
463 464 0.036010 CTTGTCAGCTAGGGGTGGTG 60.036 60.000 0.00 0.00 40.89 4.17
464 465 0.472925 TTGTCAGCTAGGGGTGGTGA 60.473 55.000 0.00 0.00 40.89 4.02
465 466 0.904865 TGTCAGCTAGGGGTGGTGAG 60.905 60.000 0.00 0.00 41.66 3.51
467 468 2.041265 AGCTAGGGGTGGTGAGGG 59.959 66.667 0.00 0.00 0.00 4.30
468 469 2.040606 GCTAGGGGTGGTGAGGGA 59.959 66.667 0.00 0.00 0.00 4.20
469 470 2.066999 GCTAGGGGTGGTGAGGGAG 61.067 68.421 0.00 0.00 0.00 4.30
470 471 2.040606 TAGGGGTGGTGAGGGAGC 59.959 66.667 0.00 0.00 0.00 4.70
471 472 3.976490 TAGGGGTGGTGAGGGAGCG 62.976 68.421 0.00 0.00 0.00 5.03
474 475 4.394712 GGTGGTGAGGGAGCGTGG 62.395 72.222 0.00 0.00 0.00 4.94
493 494 4.918201 GCCGCCATAGCTTCGCCT 62.918 66.667 0.00 0.00 36.60 5.52
495 496 2.106938 CGCCATAGCTTCGCCTCA 59.893 61.111 0.00 0.00 36.60 3.86
496 497 1.953138 CGCCATAGCTTCGCCTCAG 60.953 63.158 0.00 0.00 36.60 3.35
497 498 2.250237 GCCATAGCTTCGCCTCAGC 61.250 63.158 0.00 0.00 37.56 4.26
507 508 3.518998 GCCTCAGCGCGAGTAGGA 61.519 66.667 20.92 5.55 40.48 2.94
508 509 2.851071 GCCTCAGCGCGAGTAGGAT 61.851 63.158 20.92 0.00 40.48 3.24
510 511 1.169661 CCTCAGCGCGAGTAGGATCT 61.170 60.000 12.10 0.00 40.48 2.75
512 513 0.463833 TCAGCGCGAGTAGGATCTCA 60.464 55.000 12.10 0.00 34.46 3.27
513 514 0.040514 CAGCGCGAGTAGGATCTCAG 60.041 60.000 12.10 0.00 34.46 3.35
514 515 1.371145 GCGCGAGTAGGATCTCAGC 60.371 63.158 12.10 0.00 34.46 4.26
516 517 1.448119 CGCGAGTAGGATCTCAGCCA 61.448 60.000 0.00 0.00 34.46 4.75
517 518 0.031449 GCGAGTAGGATCTCAGCCAC 59.969 60.000 0.00 0.00 34.46 5.01
518 519 1.686355 CGAGTAGGATCTCAGCCACT 58.314 55.000 0.00 0.00 34.46 4.00
519 520 1.336440 CGAGTAGGATCTCAGCCACTG 59.664 57.143 0.00 0.00 34.46 3.66
520 521 1.068434 GAGTAGGATCTCAGCCACTGC 59.932 57.143 0.00 0.00 34.88 4.40
521 522 0.105778 GTAGGATCTCAGCCACTGCC 59.894 60.000 0.00 0.00 38.69 4.85
522 523 1.395045 TAGGATCTCAGCCACTGCCG 61.395 60.000 0.00 0.00 38.69 5.69
523 524 2.581354 GATCTCAGCCACTGCCGT 59.419 61.111 0.00 0.00 38.69 5.68
524 525 1.078848 GATCTCAGCCACTGCCGTT 60.079 57.895 0.00 0.00 38.69 4.44
525 526 1.364626 GATCTCAGCCACTGCCGTTG 61.365 60.000 0.00 0.00 38.69 4.10
526 527 3.730761 CTCAGCCACTGCCGTTGC 61.731 66.667 0.00 0.00 38.69 4.17
531 532 4.012895 CCACTGCCGTTGCGTGAC 62.013 66.667 9.80 0.00 41.40 3.67
532 533 3.268603 CACTGCCGTTGCGTGACA 61.269 61.111 0.00 0.00 41.40 3.58
533 534 3.269347 ACTGCCGTTGCGTGACAC 61.269 61.111 0.00 0.00 41.78 3.67
534 535 2.967076 CTGCCGTTGCGTGACACT 60.967 61.111 3.68 0.00 41.78 3.55
535 536 3.227372 CTGCCGTTGCGTGACACTG 62.227 63.158 3.68 0.00 41.78 3.66
536 537 2.964925 GCCGTTGCGTGACACTGA 60.965 61.111 3.68 0.00 0.00 3.41
539 540 0.586319 CCGTTGCGTGACACTGAATT 59.414 50.000 3.68 0.00 0.00 2.17
540 541 1.795872 CCGTTGCGTGACACTGAATTA 59.204 47.619 3.68 0.00 0.00 1.40
542 543 2.729360 CGTTGCGTGACACTGAATTAGA 59.271 45.455 3.68 0.00 0.00 2.10
544 545 3.660501 TGCGTGACACTGAATTAGAGT 57.339 42.857 3.68 0.00 32.60 3.24
545 546 4.776795 TGCGTGACACTGAATTAGAGTA 57.223 40.909 3.68 0.00 29.89 2.59
546 547 4.482386 TGCGTGACACTGAATTAGAGTAC 58.518 43.478 3.68 0.00 29.89 2.73
547 548 3.542704 GCGTGACACTGAATTAGAGTACG 59.457 47.826 3.68 0.00 34.10 3.67
548 549 4.720090 CGTGACACTGAATTAGAGTACGT 58.280 43.478 3.68 0.00 29.89 3.57
549 550 4.553815 CGTGACACTGAATTAGAGTACGTG 59.446 45.833 0.00 0.00 29.89 4.49
553 554 5.651530 ACACTGAATTAGAGTACGTGGATG 58.348 41.667 0.00 0.00 0.00 3.51
554 555 5.185249 ACACTGAATTAGAGTACGTGGATGT 59.815 40.000 0.00 0.00 0.00 3.06
555 556 6.376299 ACACTGAATTAGAGTACGTGGATGTA 59.624 38.462 0.00 0.00 0.00 2.29
556 557 7.094075 ACACTGAATTAGAGTACGTGGATGTAA 60.094 37.037 0.00 0.00 0.00 2.41
557 558 7.432545 CACTGAATTAGAGTACGTGGATGTAAG 59.567 40.741 0.00 0.00 0.00 2.34
558 559 6.270815 TGAATTAGAGTACGTGGATGTAAGC 58.729 40.000 0.00 0.00 0.00 3.09
566 567 4.195308 GGATGTAAGCCGCAACGA 57.805 55.556 0.00 0.00 24.31 3.85
567 568 1.713830 GGATGTAAGCCGCAACGAC 59.286 57.895 0.00 0.00 24.31 4.34
568 569 1.343821 GATGTAAGCCGCAACGACG 59.656 57.895 0.00 0.00 0.00 5.12
570 571 1.076533 ATGTAAGCCGCAACGACGAG 61.077 55.000 0.00 0.00 34.06 4.18
571 572 2.807895 TAAGCCGCAACGACGAGC 60.808 61.111 0.00 4.27 34.06 5.03
589 590 4.802051 CCGGGGTGGTGCCTCATG 62.802 72.222 0.00 0.00 37.70 3.07
595 596 0.257039 GGTGGTGCCTCATGGATCTT 59.743 55.000 0.00 0.00 34.57 2.40
598 599 2.092968 GTGGTGCCTCATGGATCTTGTA 60.093 50.000 0.00 0.00 34.57 2.41
599 600 2.171237 TGGTGCCTCATGGATCTTGTAG 59.829 50.000 0.00 0.00 34.57 2.74
600 601 2.216898 GTGCCTCATGGATCTTGTAGC 58.783 52.381 0.00 0.44 34.57 3.58
601 602 1.202568 TGCCTCATGGATCTTGTAGCG 60.203 52.381 0.00 0.00 34.57 4.26
603 604 1.506493 CTCATGGATCTTGTAGCGCC 58.494 55.000 2.29 0.00 0.00 6.53
604 605 0.249447 TCATGGATCTTGTAGCGCCG 60.249 55.000 2.29 0.00 0.00 6.46
605 606 1.595382 ATGGATCTTGTAGCGCCGC 60.595 57.895 2.29 0.00 0.00 6.53
606 607 2.967615 GGATCTTGTAGCGCCGCC 60.968 66.667 4.98 0.00 0.00 6.13
607 608 3.330853 GATCTTGTAGCGCCGCCG 61.331 66.667 4.98 0.00 37.57 6.46
627 628 1.660167 CATCGCCTGCTTGATCTGAA 58.340 50.000 0.00 0.00 0.00 3.02
635 636 1.538047 GCTTGATCTGAAAGCCCACA 58.462 50.000 5.20 0.00 43.45 4.17
637 638 2.089980 CTTGATCTGAAAGCCCACAGG 58.910 52.381 0.00 0.00 35.20 4.00
648 649 3.962557 CCACAGGCTAGGGAGGAG 58.037 66.667 0.00 0.00 0.00 3.69
649 650 1.311403 CCACAGGCTAGGGAGGAGA 59.689 63.158 0.00 0.00 0.00 3.71
650 651 0.758685 CCACAGGCTAGGGAGGAGAG 60.759 65.000 0.00 0.00 0.00 3.20
651 652 0.758685 CACAGGCTAGGGAGGAGAGG 60.759 65.000 0.00 0.00 0.00 3.69
653 654 0.178964 CAGGCTAGGGAGGAGAGGAG 60.179 65.000 0.00 0.00 0.00 3.69
654 655 1.155155 GGCTAGGGAGGAGAGGAGG 59.845 68.421 0.00 0.00 0.00 4.30
655 656 1.155155 GCTAGGGAGGAGAGGAGGG 59.845 68.421 0.00 0.00 0.00 4.30
656 657 1.365105 GCTAGGGAGGAGAGGAGGGA 61.365 65.000 0.00 0.00 0.00 4.20
657 658 0.777446 CTAGGGAGGAGAGGAGGGAG 59.223 65.000 0.00 0.00 0.00 4.30
660 661 0.178935 GGGAGGAGAGGAGGGAGATG 60.179 65.000 0.00 0.00 0.00 2.90
661 662 0.178935 GGAGGAGAGGAGGGAGATGG 60.179 65.000 0.00 0.00 0.00 3.51
663 664 0.264359 AGGAGAGGAGGGAGATGGTG 59.736 60.000 0.00 0.00 0.00 4.17
665 666 0.762461 GAGAGGAGGGAGATGGTGGG 60.762 65.000 0.00 0.00 0.00 4.61
666 667 2.367512 AGGAGGGAGATGGTGGGC 60.368 66.667 0.00 0.00 0.00 5.36
667 668 3.866582 GGAGGGAGATGGTGGGCG 61.867 72.222 0.00 0.00 0.00 6.13
668 669 3.866582 GAGGGAGATGGTGGGCGG 61.867 72.222 0.00 0.00 0.00 6.13
669 670 4.741239 AGGGAGATGGTGGGCGGT 62.741 66.667 0.00 0.00 0.00 5.68
671 672 2.808206 GGGAGATGGTGGGCGGTAG 61.808 68.421 0.00 0.00 0.00 3.18
672 673 2.808206 GGAGATGGTGGGCGGTAGG 61.808 68.421 0.00 0.00 0.00 3.18
673 674 3.462199 GAGATGGTGGGCGGTAGGC 62.462 68.421 0.00 0.00 42.96 3.93
674 675 4.910585 GATGGTGGGCGGTAGGCG 62.911 72.222 0.00 0.00 44.92 5.52
678 679 4.217159 GTGGGCGGTAGGCGGTAG 62.217 72.222 0.00 0.00 44.92 3.18
681 682 4.587189 GGCGGTAGGCGGTAGCTG 62.587 72.222 0.00 0.00 44.92 4.24
682 683 4.587189 GCGGTAGGCGGTAGCTGG 62.587 72.222 0.00 0.00 44.37 4.85
683 684 3.912907 CGGTAGGCGGTAGCTGGG 61.913 72.222 0.00 0.00 44.37 4.45
684 685 2.443390 GGTAGGCGGTAGCTGGGA 60.443 66.667 0.00 0.00 44.37 4.37
685 686 2.499827 GGTAGGCGGTAGCTGGGAG 61.500 68.421 0.00 0.00 44.37 4.30
686 687 2.123425 TAGGCGGTAGCTGGGAGG 60.123 66.667 0.00 0.00 44.37 4.30
687 688 3.751049 TAGGCGGTAGCTGGGAGGG 62.751 68.421 0.00 0.00 44.37 4.30
691 692 2.446802 GGTAGCTGGGAGGGGGAG 60.447 72.222 0.00 0.00 0.00 4.30
692 693 2.696893 GTAGCTGGGAGGGGGAGA 59.303 66.667 0.00 0.00 0.00 3.71
693 694 1.762858 GTAGCTGGGAGGGGGAGAC 60.763 68.421 0.00 0.00 0.00 3.36
715 716 3.609214 GACGGTTGCGGTGCATTGG 62.609 63.158 0.00 0.00 38.76 3.16
716 717 3.361158 CGGTTGCGGTGCATTGGA 61.361 61.111 0.00 0.00 38.76 3.53
717 718 2.568090 GGTTGCGGTGCATTGGAG 59.432 61.111 0.00 0.00 38.76 3.86
718 719 1.971167 GGTTGCGGTGCATTGGAGA 60.971 57.895 0.00 0.00 38.76 3.71
719 720 1.315257 GGTTGCGGTGCATTGGAGAT 61.315 55.000 0.00 0.00 38.76 2.75
720 721 0.179156 GTTGCGGTGCATTGGAGATG 60.179 55.000 0.00 0.00 38.76 2.90
721 722 1.314534 TTGCGGTGCATTGGAGATGG 61.315 55.000 0.00 0.00 38.76 3.51
722 723 2.484062 GCGGTGCATTGGAGATGGG 61.484 63.158 0.00 0.00 0.00 4.00
725 726 1.106285 GGTGCATTGGAGATGGGAAC 58.894 55.000 0.00 0.00 0.00 3.62
738 739 3.231298 GGAACCTCGGAGATGGGG 58.769 66.667 6.58 0.00 33.89 4.96
740 741 3.090532 AACCTCGGAGATGGGGCC 61.091 66.667 6.58 0.00 33.89 5.80
741 742 3.642741 AACCTCGGAGATGGGGCCT 62.643 63.158 6.58 0.00 33.89 5.19
742 743 3.554342 CCTCGGAGATGGGGCCTG 61.554 72.222 6.58 0.00 33.89 4.85
743 744 3.554342 CTCGGAGATGGGGCCTGG 61.554 72.222 0.84 0.00 33.89 4.45
763 764 2.472909 GGCGCATCGGGGAAAGAAG 61.473 63.158 10.83 0.00 0.00 2.85
764 765 1.449601 GCGCATCGGGGAAAGAAGA 60.450 57.895 0.30 0.00 0.00 2.87
765 766 1.432270 GCGCATCGGGGAAAGAAGAG 61.432 60.000 0.30 0.00 0.00 2.85
766 767 1.432270 CGCATCGGGGAAAGAAGAGC 61.432 60.000 0.00 0.00 0.00 4.09
767 768 0.107459 GCATCGGGGAAAGAAGAGCT 60.107 55.000 0.00 0.00 0.00 4.09
768 769 1.139058 GCATCGGGGAAAGAAGAGCTA 59.861 52.381 0.00 0.00 0.00 3.32
769 770 2.804933 GCATCGGGGAAAGAAGAGCTAG 60.805 54.545 0.00 0.00 0.00 3.42
770 771 2.526888 TCGGGGAAAGAAGAGCTAGA 57.473 50.000 0.00 0.00 0.00 2.43
771 772 2.379972 TCGGGGAAAGAAGAGCTAGAG 58.620 52.381 0.00 0.00 0.00 2.43
773 774 2.753247 GGGGAAAGAAGAGCTAGAGGA 58.247 52.381 0.00 0.00 0.00 3.71
774 775 3.108376 GGGGAAAGAAGAGCTAGAGGAA 58.892 50.000 0.00 0.00 0.00 3.36
775 776 3.133901 GGGGAAAGAAGAGCTAGAGGAAG 59.866 52.174 0.00 0.00 0.00 3.46
776 777 4.027437 GGGAAAGAAGAGCTAGAGGAAGA 58.973 47.826 0.00 0.00 0.00 2.87
777 778 4.142026 GGGAAAGAAGAGCTAGAGGAAGAC 60.142 50.000 0.00 0.00 0.00 3.01
778 779 4.709886 GGAAAGAAGAGCTAGAGGAAGACT 59.290 45.833 0.00 0.00 0.00 3.24
780 781 3.023832 AGAAGAGCTAGAGGAAGACTGC 58.976 50.000 0.00 0.00 0.00 4.40
781 782 1.775385 AGAGCTAGAGGAAGACTGCC 58.225 55.000 0.00 0.00 0.00 4.85
783 784 1.227118 GCTAGAGGAAGACTGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
784 785 1.949847 GCTAGAGGAAGACTGCCGCA 61.950 60.000 5.94 0.00 0.00 5.69
787 788 1.880340 GAGGAAGACTGCCGCATCG 60.880 63.158 0.00 0.00 0.00 3.84
797 798 4.530857 CCGCATCGGGAGGGTGAC 62.531 72.222 0.00 0.00 44.15 3.67
798 799 3.770040 CGCATCGGGAGGGTGACA 61.770 66.667 0.00 0.00 0.00 3.58
799 800 2.187946 GCATCGGGAGGGTGACAG 59.812 66.667 0.00 0.00 0.00 3.51
800 801 2.359169 GCATCGGGAGGGTGACAGA 61.359 63.158 0.00 0.00 0.00 3.41
801 802 1.690219 GCATCGGGAGGGTGACAGAT 61.690 60.000 0.00 0.00 0.00 2.90
803 804 2.039418 CATCGGGAGGGTGACAGATAA 58.961 52.381 0.00 0.00 0.00 1.75
804 805 1.776662 TCGGGAGGGTGACAGATAAG 58.223 55.000 0.00 0.00 0.00 1.73
805 806 1.286849 TCGGGAGGGTGACAGATAAGA 59.713 52.381 0.00 0.00 0.00 2.10
806 807 1.683917 CGGGAGGGTGACAGATAAGAG 59.316 57.143 0.00 0.00 0.00 2.85
808 809 2.627217 GGGAGGGTGACAGATAAGAGGT 60.627 54.545 0.00 0.00 0.00 3.85
809 810 2.432510 GGAGGGTGACAGATAAGAGGTG 59.567 54.545 0.00 0.00 0.00 4.00
811 812 3.100671 AGGGTGACAGATAAGAGGTGAC 58.899 50.000 0.00 0.00 0.00 3.67
813 814 2.832129 GGTGACAGATAAGAGGTGACCA 59.168 50.000 3.63 0.00 38.47 4.02
814 815 3.118956 GGTGACAGATAAGAGGTGACCAG 60.119 52.174 3.63 0.00 38.47 4.00
817 818 2.834549 ACAGATAAGAGGTGACCAGGTG 59.165 50.000 3.63 0.00 0.00 4.00
818 819 2.169352 CAGATAAGAGGTGACCAGGTGG 59.831 54.545 3.63 0.00 42.17 4.61
819 820 1.486726 GATAAGAGGTGACCAGGTGGG 59.513 57.143 3.63 0.00 44.81 4.61
830 831 3.576259 AGGTGGGTGGGGTTTCCG 61.576 66.667 0.00 0.00 38.76 4.30
832 833 2.281970 GTGGGTGGGGTTTCCGAC 60.282 66.667 0.00 0.00 40.52 4.79
841 842 1.285641 GGTTTCCGACCGTACGACA 59.714 57.895 18.76 0.00 39.00 4.35
842 843 1.003769 GGTTTCCGACCGTACGACAC 61.004 60.000 18.76 6.54 39.00 3.67
843 844 1.003769 GTTTCCGACCGTACGACACC 61.004 60.000 18.76 1.52 35.09 4.16
845 846 1.855213 TTCCGACCGTACGACACCTG 61.855 60.000 18.76 0.48 35.09 4.00
846 847 2.327343 CCGACCGTACGACACCTGA 61.327 63.158 18.76 0.00 35.09 3.86
847 848 1.154338 CGACCGTACGACACCTGAC 60.154 63.158 18.76 0.00 35.09 3.51
848 849 1.844771 CGACCGTACGACACCTGACA 61.845 60.000 18.76 0.00 35.09 3.58
851 852 1.080974 CGTACGACACCTGACACCC 60.081 63.158 10.44 0.00 0.00 4.61
855 856 2.920912 GACACCTGACACCCCCGA 60.921 66.667 0.00 0.00 0.00 5.14
857 858 2.240162 GACACCTGACACCCCCGATC 62.240 65.000 0.00 0.00 0.00 3.69
858 859 1.990060 CACCTGACACCCCCGATCT 60.990 63.158 0.00 0.00 0.00 2.75
859 860 1.990060 ACCTGACACCCCCGATCTG 60.990 63.158 0.00 0.00 0.00 2.90
860 861 2.735772 CCTGACACCCCCGATCTGG 61.736 68.421 0.00 0.00 37.55 3.86
861 862 1.685765 CTGACACCCCCGATCTGGA 60.686 63.158 4.46 0.00 42.00 3.86
863 864 1.048724 TGACACCCCCGATCTGGATC 61.049 60.000 4.46 0.83 42.00 3.36
864 865 1.759459 GACACCCCCGATCTGGATCC 61.759 65.000 4.20 4.20 42.00 3.36
865 866 2.524394 ACCCCCGATCTGGATCCG 60.524 66.667 7.39 2.06 42.00 4.18
866 867 2.203640 CCCCCGATCTGGATCCGA 60.204 66.667 7.39 7.99 42.00 4.55
867 868 2.574955 CCCCCGATCTGGATCCGAC 61.575 68.421 7.39 0.00 42.00 4.79
868 869 2.645567 CCCGATCTGGATCCGACG 59.354 66.667 7.39 9.64 42.00 5.12
871 872 2.556459 CGATCTGGATCCGACGGCT 61.556 63.158 9.66 0.00 34.40 5.52
873 874 2.148558 GATCTGGATCCGACGGCTCC 62.149 65.000 26.43 26.43 38.39 4.70
874 875 3.917760 CTGGATCCGACGGCTCCC 61.918 72.222 29.06 19.60 37.20 4.30
896 897 2.251371 GTGTGCGCTCGGGAAAAC 59.749 61.111 9.73 0.00 0.00 2.43
897 898 2.203084 TGTGCGCTCGGGAAAACA 60.203 55.556 9.73 0.00 0.00 2.83
898 899 2.251371 GTGCGCTCGGGAAAACAC 59.749 61.111 9.73 0.00 0.00 3.32
899 900 3.342627 TGCGCTCGGGAAAACACG 61.343 61.111 9.73 0.00 0.00 4.49
900 901 4.736631 GCGCTCGGGAAAACACGC 62.737 66.667 0.00 0.00 39.49 5.34
902 903 3.733960 GCTCGGGAAAACACGCCC 61.734 66.667 0.00 0.00 41.11 6.13
1034 1035 4.148825 CTCCTCGCTCAACCCCCG 62.149 72.222 0.00 0.00 0.00 5.73
1227 1228 1.153489 CTCCCTCCGCATCACACTG 60.153 63.158 0.00 0.00 0.00 3.66
1269 1270 1.072666 CAGCCGCGAAATTTCCAAGC 61.073 55.000 8.23 11.77 0.00 4.01
1271 1272 0.798389 GCCGCGAAATTTCCAAGCTC 60.798 55.000 8.23 2.28 0.00 4.09
1731 1743 2.158813 AGTTTCTTTGTCTTCCGCTCCA 60.159 45.455 0.00 0.00 0.00 3.86
1742 1754 2.507102 CGCTCCACCGTGCTACTG 60.507 66.667 0.00 0.00 0.00 2.74
1895 2405 3.426191 CACATCAAAATGTTGCAGTTCCG 59.574 43.478 0.00 0.00 43.74 4.30
1917 2427 5.867716 CCGTAGAGCAGTAAAAGCTTCTTAA 59.132 40.000 0.00 0.00 43.58 1.85
2015 2525 2.620115 CTCTTGCAACTGCTTTCTGGAA 59.380 45.455 0.00 0.00 42.66 3.53
2315 2826 4.343814 TCCCGTAGTTCATGCATCTATCAA 59.656 41.667 0.00 0.00 0.00 2.57
2402 3076 9.476202 TGTCTAACATGTACATATATGCAAGAC 57.524 33.333 12.79 13.35 38.66 3.01
2592 3361 9.093970 GCCACCATTAACTTATTTGGAAAATAC 57.906 33.333 0.00 0.00 33.36 1.89
2627 3396 2.657143 ACTCTAGAACGGCCTCCTTAG 58.343 52.381 0.00 0.00 0.00 2.18
2749 3518 5.858381 TGGTTCTTATATGACCTCATGAGC 58.142 41.667 17.76 5.29 37.15 4.26
2858 3627 7.759433 GTGCAGTACTTATGGTTGCAAATTAAT 59.241 33.333 0.00 0.00 41.47 1.40
2923 3692 1.879380 TCACATTTGAAGAGGCAACCG 59.121 47.619 0.00 0.00 37.17 4.44
2945 3714 4.563184 CGACTACTGTAAATCTGAAGTGGC 59.437 45.833 0.00 0.00 0.00 5.01
2988 3758 1.627864 TCCTCTTCCACGACATGACA 58.372 50.000 0.00 0.00 0.00 3.58
3006 3776 6.015940 ACATGACAAAATTCTCCCAACTCTTC 60.016 38.462 0.00 0.00 0.00 2.87
3023 3793 6.692232 ACTCTTCGACTTTATTGTTCTTCG 57.308 37.500 0.00 0.00 0.00 3.79
3044 3814 7.773224 TCTTCGTTATGTGTATTTGGGATCAAT 59.227 33.333 0.00 0.00 32.28 2.57
3093 3863 5.964958 TTTGCAACTCTTCCATCCTTTAG 57.035 39.130 0.00 0.00 0.00 1.85
3094 3864 3.955471 TGCAACTCTTCCATCCTTTAGG 58.045 45.455 0.00 0.00 0.00 2.69
3095 3865 3.282885 GCAACTCTTCCATCCTTTAGGG 58.717 50.000 0.00 0.00 35.41 3.53
3096 3866 3.282885 CAACTCTTCCATCCTTTAGGGC 58.717 50.000 0.00 0.00 35.41 5.19
3097 3867 2.562296 ACTCTTCCATCCTTTAGGGCA 58.438 47.619 0.00 0.00 35.41 5.36
3098 3868 3.126453 ACTCTTCCATCCTTTAGGGCAT 58.874 45.455 0.00 0.00 35.41 4.40
3099 3869 4.307259 ACTCTTCCATCCTTTAGGGCATA 58.693 43.478 0.00 0.00 35.41 3.14
3179 3949 6.763355 AGCTATCATACAACTACTCCAATGG 58.237 40.000 0.00 0.00 0.00 3.16
3258 4028 2.346766 TCTTGGAGCTTGTGCAAAGA 57.653 45.000 11.34 1.71 42.74 2.52
3290 4060 8.604890 GGTTATTCTACATACAACTTTGCTCTC 58.395 37.037 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.431415 AGCTATACCCGATGATAGTGCA 58.569 45.455 0.00 0.00 0.00 4.57
2 3 5.644977 TGAAGCTATACCCGATGATAGTG 57.355 43.478 0.00 0.00 0.00 2.74
3 4 5.952347 TCATGAAGCTATACCCGATGATAGT 59.048 40.000 0.00 0.00 0.00 2.12
5 6 6.850752 TTCATGAAGCTATACCCGATGATA 57.149 37.500 3.38 0.00 0.00 2.15
6 7 5.745312 TTCATGAAGCTATACCCGATGAT 57.255 39.130 3.38 0.00 0.00 2.45
7 8 5.745312 ATTCATGAAGCTATACCCGATGA 57.255 39.130 14.54 0.00 0.00 2.92
8 9 5.934043 TGAATTCATGAAGCTATACCCGATG 59.066 40.000 14.54 0.00 0.00 3.84
9 10 6.114187 TGAATTCATGAAGCTATACCCGAT 57.886 37.500 14.54 0.00 0.00 4.18
10 11 5.545063 TGAATTCATGAAGCTATACCCGA 57.455 39.130 14.54 0.00 0.00 5.14
11 12 5.760253 AGTTGAATTCATGAAGCTATACCCG 59.240 40.000 14.54 0.00 0.00 5.28
12 13 7.500559 AGAAGTTGAATTCATGAAGCTATACCC 59.499 37.037 14.54 1.02 0.00 3.69
13 14 8.443953 AGAAGTTGAATTCATGAAGCTATACC 57.556 34.615 14.54 0.34 0.00 2.73
14 15 8.272176 CGAGAAGTTGAATTCATGAAGCTATAC 58.728 37.037 14.54 8.07 0.00 1.47
15 16 7.439356 CCGAGAAGTTGAATTCATGAAGCTATA 59.561 37.037 14.54 0.00 0.00 1.31
18 19 4.394300 CCGAGAAGTTGAATTCATGAAGCT 59.606 41.667 14.54 3.35 0.00 3.74
20 21 5.447010 GCTCCGAGAAGTTGAATTCATGAAG 60.447 44.000 14.54 0.00 0.00 3.02
21 22 4.393062 GCTCCGAGAAGTTGAATTCATGAA 59.607 41.667 11.26 11.26 0.00 2.57
23 24 3.064545 GGCTCCGAGAAGTTGAATTCATG 59.935 47.826 9.40 0.00 0.00 3.07
24 25 3.274288 GGCTCCGAGAAGTTGAATTCAT 58.726 45.455 9.40 0.00 0.00 2.57
26 27 2.010497 GGGCTCCGAGAAGTTGAATTC 58.990 52.381 0.00 0.00 0.00 2.17
27 28 1.351017 TGGGCTCCGAGAAGTTGAATT 59.649 47.619 0.00 0.00 0.00 2.17
28 29 0.984230 TGGGCTCCGAGAAGTTGAAT 59.016 50.000 0.00 0.00 0.00 2.57
29 30 0.762418 TTGGGCTCCGAGAAGTTGAA 59.238 50.000 0.00 0.00 0.00 2.69
31 32 1.470098 CATTTGGGCTCCGAGAAGTTG 59.530 52.381 0.00 0.00 0.00 3.16
32 33 1.073923 ACATTTGGGCTCCGAGAAGTT 59.926 47.619 0.00 0.00 0.00 2.66
33 34 0.693049 ACATTTGGGCTCCGAGAAGT 59.307 50.000 0.00 0.00 0.00 3.01
34 35 1.740025 GAACATTTGGGCTCCGAGAAG 59.260 52.381 0.00 0.00 0.00 2.85
35 36 1.821216 GAACATTTGGGCTCCGAGAA 58.179 50.000 0.00 0.00 0.00 2.87
36 37 0.391130 CGAACATTTGGGCTCCGAGA 60.391 55.000 0.00 0.00 0.00 4.04
37 38 1.369091 CCGAACATTTGGGCTCCGAG 61.369 60.000 0.00 0.00 0.00 4.63
38 39 1.376683 CCGAACATTTGGGCTCCGA 60.377 57.895 0.00 0.00 0.00 4.55
39 40 2.406616 CCCGAACATTTGGGCTCCG 61.407 63.158 3.87 0.00 44.74 4.63
40 41 3.603365 CCCGAACATTTGGGCTCC 58.397 61.111 3.87 0.00 44.74 4.70
44 45 5.799597 AATGAAATTGTCCCGAACATTTGGG 60.800 40.000 10.42 10.42 43.72 4.12
48 49 4.217550 ACGAATGAAATTGTCCCGAACATT 59.782 37.500 0.00 0.00 36.07 2.71
49 50 3.756434 ACGAATGAAATTGTCCCGAACAT 59.244 39.130 0.00 0.00 36.07 2.71
51 52 3.488489 CACGAATGAAATTGTCCCGAAC 58.512 45.455 0.00 0.00 36.07 3.95
52 53 2.486203 CCACGAATGAAATTGTCCCGAA 59.514 45.455 0.00 0.00 36.07 4.30
55 56 3.081804 ACTCCACGAATGAAATTGTCCC 58.918 45.455 0.00 0.00 36.07 4.46
56 57 4.766404 AACTCCACGAATGAAATTGTCC 57.234 40.909 0.00 0.00 36.07 4.02
57 58 5.399301 CACAAACTCCACGAATGAAATTGTC 59.601 40.000 0.00 0.00 36.07 3.18
58 59 5.067153 TCACAAACTCCACGAATGAAATTGT 59.933 36.000 0.00 0.00 36.07 2.71
59 60 5.518812 TCACAAACTCCACGAATGAAATTG 58.481 37.500 0.00 0.00 36.07 2.32
61 62 5.762045 CTTCACAAACTCCACGAATGAAAT 58.238 37.500 0.00 0.00 0.00 2.17
62 63 4.497340 GCTTCACAAACTCCACGAATGAAA 60.497 41.667 0.00 0.00 0.00 2.69
63 64 3.003275 GCTTCACAAACTCCACGAATGAA 59.997 43.478 0.00 0.00 0.00 2.57
64 65 2.548057 GCTTCACAAACTCCACGAATGA 59.452 45.455 0.00 0.00 0.00 2.57
66 67 1.880027 GGCTTCACAAACTCCACGAAT 59.120 47.619 0.00 0.00 0.00 3.34
67 68 1.305201 GGCTTCACAAACTCCACGAA 58.695 50.000 0.00 0.00 0.00 3.85
70 71 1.515521 CCGGGCTTCACAAACTCCAC 61.516 60.000 0.00 0.00 0.00 4.02
72 73 0.955919 CTCCGGGCTTCACAAACTCC 60.956 60.000 0.00 0.00 0.00 3.85
73 74 1.578206 GCTCCGGGCTTCACAAACTC 61.578 60.000 0.00 0.00 38.06 3.01
75 76 2.954611 GCTCCGGGCTTCACAAAC 59.045 61.111 0.00 0.00 38.06 2.93
85 86 2.685380 AAGTCCTCCAGCTCCGGG 60.685 66.667 0.00 0.00 0.00 5.73
86 87 1.954362 CTGAAGTCCTCCAGCTCCGG 61.954 65.000 0.00 0.00 0.00 5.14
87 88 1.515020 CTGAAGTCCTCCAGCTCCG 59.485 63.158 0.00 0.00 0.00 4.63
89 90 1.220477 GCCTGAAGTCCTCCAGCTC 59.780 63.158 0.00 0.00 0.00 4.09
90 91 2.297129 GGCCTGAAGTCCTCCAGCT 61.297 63.158 0.00 0.00 0.00 4.24
92 93 0.325671 TAGGGCCTGAAGTCCTCCAG 60.326 60.000 18.53 0.00 32.46 3.86
93 94 0.118346 TTAGGGCCTGAAGTCCTCCA 59.882 55.000 18.53 0.00 32.46 3.86
94 95 0.833949 CTTAGGGCCTGAAGTCCTCC 59.166 60.000 18.53 0.00 32.46 4.30
95 96 1.574263 ACTTAGGGCCTGAAGTCCTC 58.426 55.000 18.53 0.00 29.85 3.71
96 97 2.942604 TACTTAGGGCCTGAAGTCCT 57.057 50.000 23.05 3.64 37.16 3.85
97 98 2.485657 GCATACTTAGGGCCTGAAGTCC 60.486 54.545 23.05 13.77 37.16 3.85
98 99 2.170607 TGCATACTTAGGGCCTGAAGTC 59.829 50.000 23.05 14.26 37.16 3.01
99 100 2.171448 CTGCATACTTAGGGCCTGAAGT 59.829 50.000 18.53 21.51 39.25 3.01
100 101 2.843701 CTGCATACTTAGGGCCTGAAG 58.156 52.381 18.53 17.16 0.00 3.02
102 103 0.469917 GCTGCATACTTAGGGCCTGA 59.530 55.000 18.53 7.19 0.00 3.86
103 104 0.181114 TGCTGCATACTTAGGGCCTG 59.819 55.000 18.53 2.03 0.00 4.85
104 105 0.471617 CTGCTGCATACTTAGGGCCT 59.528 55.000 12.58 12.58 0.00 5.19
105 106 0.469917 TCTGCTGCATACTTAGGGCC 59.530 55.000 1.31 0.00 0.00 5.80
106 107 2.332063 TTCTGCTGCATACTTAGGGC 57.668 50.000 1.31 0.00 0.00 5.19
107 108 5.585390 CAATTTTCTGCTGCATACTTAGGG 58.415 41.667 1.31 0.00 0.00 3.53
108 109 5.039333 GCAATTTTCTGCTGCATACTTAGG 58.961 41.667 1.31 0.00 39.34 2.69
109 110 5.643664 TGCAATTTTCTGCTGCATACTTAG 58.356 37.500 1.31 0.00 41.01 2.18
110 111 5.641783 TGCAATTTTCTGCTGCATACTTA 57.358 34.783 1.31 0.00 41.01 2.24
112 113 4.524316 TTGCAATTTTCTGCTGCATACT 57.476 36.364 1.31 0.00 44.99 2.12
114 115 5.391097 GCATTTTGCAATTTTCTGCTGCATA 60.391 36.000 1.31 0.00 44.99 3.14
115 116 4.614993 GCATTTTGCAATTTTCTGCTGCAT 60.615 37.500 1.31 0.00 44.99 3.96
116 117 3.304123 GCATTTTGCAATTTTCTGCTGCA 60.304 39.130 0.00 0.88 44.26 4.41
117 118 3.231160 GCATTTTGCAATTTTCTGCTGC 58.769 40.909 0.00 0.00 44.26 5.25
131 132 8.695284 CATTTTCATTTGGTTGAATGCATTTTG 58.305 29.630 14.33 2.54 37.03 2.44
132 133 7.868415 CCATTTTCATTTGGTTGAATGCATTTT 59.132 29.630 14.33 0.00 37.03 1.82
133 134 7.014422 ACCATTTTCATTTGGTTGAATGCATTT 59.986 29.630 14.33 0.00 43.73 2.32
134 135 6.490721 ACCATTTTCATTTGGTTGAATGCATT 59.509 30.769 12.83 12.83 43.73 3.56
135 136 6.005198 ACCATTTTCATTTGGTTGAATGCAT 58.995 32.000 0.00 0.00 43.73 3.96
137 138 5.469421 TCACCATTTTCATTTGGTTGAATGC 59.531 36.000 0.00 0.00 43.73 3.56
138 139 7.388224 TCATCACCATTTTCATTTGGTTGAATG 59.612 33.333 0.00 0.00 43.73 2.67
139 140 7.451732 TCATCACCATTTTCATTTGGTTGAAT 58.548 30.769 0.00 0.00 43.73 2.57
141 142 6.041865 ACTCATCACCATTTTCATTTGGTTGA 59.958 34.615 0.00 0.00 43.73 3.18
142 143 6.146510 CACTCATCACCATTTTCATTTGGTTG 59.853 38.462 0.00 0.00 43.73 3.77
143 144 6.225318 CACTCATCACCATTTTCATTTGGTT 58.775 36.000 0.00 0.00 43.73 3.67
146 147 6.028146 TCCACTCATCACCATTTTCATTTG 57.972 37.500 0.00 0.00 0.00 2.32
147 148 6.012113 TCTCCACTCATCACCATTTTCATTT 58.988 36.000 0.00 0.00 0.00 2.32
148 149 5.573219 TCTCCACTCATCACCATTTTCATT 58.427 37.500 0.00 0.00 0.00 2.57
149 150 5.045359 TCTCTCCACTCATCACCATTTTCAT 60.045 40.000 0.00 0.00 0.00 2.57
152 153 4.916041 TCTCTCCACTCATCACCATTTT 57.084 40.909 0.00 0.00 0.00 1.82
154 155 5.071519 CCTATTCTCTCCACTCATCACCATT 59.928 44.000 0.00 0.00 0.00 3.16
155 156 4.592351 CCTATTCTCTCCACTCATCACCAT 59.408 45.833 0.00 0.00 0.00 3.55
157 158 3.964031 ACCTATTCTCTCCACTCATCACC 59.036 47.826 0.00 0.00 0.00 4.02
161 162 4.614475 TGTGACCTATTCTCTCCACTCAT 58.386 43.478 0.00 0.00 0.00 2.90
162 163 4.047627 TGTGACCTATTCTCTCCACTCA 57.952 45.455 0.00 0.00 0.00 3.41
163 164 5.010213 GGTATGTGACCTATTCTCTCCACTC 59.990 48.000 0.00 0.00 45.89 3.51
178 179 1.210478 ACCATCCAGCAGGTATGTGAC 59.790 52.381 0.00 0.00 36.07 3.67
179 180 1.210234 CACCATCCAGCAGGTATGTGA 59.790 52.381 0.00 0.00 36.07 3.58
180 181 1.210234 TCACCATCCAGCAGGTATGTG 59.790 52.381 0.00 1.53 36.07 3.21
187 188 1.134461 CCTTCTCTCACCATCCAGCAG 60.134 57.143 0.00 0.00 0.00 4.24
188 189 0.907486 CCTTCTCTCACCATCCAGCA 59.093 55.000 0.00 0.00 0.00 4.41
189 190 0.908198 ACCTTCTCTCACCATCCAGC 59.092 55.000 0.00 0.00 0.00 4.85
190 191 2.355513 CCAACCTTCTCTCACCATCCAG 60.356 54.545 0.00 0.00 0.00 3.86
192 193 1.065126 CCCAACCTTCTCTCACCATCC 60.065 57.143 0.00 0.00 0.00 3.51
194 195 0.329596 GCCCAACCTTCTCTCACCAT 59.670 55.000 0.00 0.00 0.00 3.55
196 197 1.376037 CGCCCAACCTTCTCTCACC 60.376 63.158 0.00 0.00 0.00 4.02
197 198 2.035442 GCGCCCAACCTTCTCTCAC 61.035 63.158 0.00 0.00 0.00 3.51
198 199 2.217038 AGCGCCCAACCTTCTCTCA 61.217 57.895 2.29 0.00 0.00 3.27
199 200 1.743252 CAGCGCCCAACCTTCTCTC 60.743 63.158 2.29 0.00 0.00 3.20
200 201 2.348998 CAGCGCCCAACCTTCTCT 59.651 61.111 2.29 0.00 0.00 3.10
201 202 3.435186 GCAGCGCCCAACCTTCTC 61.435 66.667 2.29 0.00 0.00 2.87
220 221 2.802816 CTGATCTAATAGGCACAACCGC 59.197 50.000 0.00 0.00 46.52 5.68
222 223 4.423625 ACCTGATCTAATAGGCACAACC 57.576 45.455 0.00 0.00 37.61 3.77
223 224 5.511545 CCCTACCTGATCTAATAGGCACAAC 60.512 48.000 9.87 0.00 37.61 3.32
224 225 4.593206 CCCTACCTGATCTAATAGGCACAA 59.407 45.833 9.87 0.00 37.61 3.33
225 226 4.160329 CCCTACCTGATCTAATAGGCACA 58.840 47.826 9.87 0.00 37.61 4.57
226 227 3.515901 CCCCTACCTGATCTAATAGGCAC 59.484 52.174 9.87 0.00 37.61 5.01
227 228 3.404769 TCCCCTACCTGATCTAATAGGCA 59.595 47.826 9.87 0.00 37.61 4.75
228 229 4.027437 CTCCCCTACCTGATCTAATAGGC 58.973 52.174 9.87 0.00 37.61 3.93
230 231 4.295238 TCCCTCCCCTACCTGATCTAATAG 59.705 50.000 0.00 0.00 0.00 1.73
232 233 3.079854 TCCCTCCCCTACCTGATCTAAT 58.920 50.000 0.00 0.00 0.00 1.73
233 234 2.179424 GTCCCTCCCCTACCTGATCTAA 59.821 54.545 0.00 0.00 0.00 2.10
235 236 0.563672 GTCCCTCCCCTACCTGATCT 59.436 60.000 0.00 0.00 0.00 2.75
236 237 0.472161 GGTCCCTCCCCTACCTGATC 60.472 65.000 0.00 0.00 0.00 2.92
237 238 1.236026 TGGTCCCTCCCCTACCTGAT 61.236 60.000 0.00 0.00 34.23 2.90
238 239 1.236026 ATGGTCCCTCCCCTACCTGA 61.236 60.000 0.00 0.00 34.23 3.86
239 240 1.056700 CATGGTCCCTCCCCTACCTG 61.057 65.000 0.00 0.00 34.23 4.00
240 241 1.318380 CATGGTCCCTCCCCTACCT 59.682 63.158 0.00 0.00 34.23 3.08
241 242 1.770518 CCATGGTCCCTCCCCTACC 60.771 68.421 2.57 0.00 34.77 3.18
243 244 2.709396 CCCATGGTCCCTCCCCTA 59.291 66.667 11.73 0.00 34.77 3.53
247 248 4.176752 GACGCCCATGGTCCCTCC 62.177 72.222 11.73 0.00 0.00 4.30
248 249 4.176752 GGACGCCCATGGTCCCTC 62.177 72.222 11.73 0.00 46.65 4.30
252 253 3.792053 CTAGCGGACGCCCATGGTC 62.792 68.421 13.63 1.13 43.17 4.02
253 254 3.849951 CTAGCGGACGCCCATGGT 61.850 66.667 13.63 0.00 43.17 3.55
254 255 4.609018 CCTAGCGGACGCCCATGG 62.609 72.222 13.63 4.14 43.17 3.66
261 262 3.760035 ACACCAGCCTAGCGGACG 61.760 66.667 4.82 0.00 0.00 4.79
262 263 2.125512 CACACCAGCCTAGCGGAC 60.126 66.667 4.82 0.00 0.00 4.79
263 264 3.390521 CCACACCAGCCTAGCGGA 61.391 66.667 4.82 0.00 0.00 5.54
264 265 4.473520 CCCACACCAGCCTAGCGG 62.474 72.222 0.00 0.00 0.00 5.52
265 266 4.473520 CCCCACACCAGCCTAGCG 62.474 72.222 0.00 0.00 0.00 4.26
266 267 3.009115 TCCCCACACCAGCCTAGC 61.009 66.667 0.00 0.00 0.00 3.42
268 269 1.306141 CTCTCCCCACACCAGCCTA 60.306 63.158 0.00 0.00 0.00 3.93
269 270 2.608988 CTCTCCCCACACCAGCCT 60.609 66.667 0.00 0.00 0.00 4.58
270 271 2.607750 TCTCTCCCCACACCAGCC 60.608 66.667 0.00 0.00 0.00 4.85
271 272 1.610673 TCTCTCTCCCCACACCAGC 60.611 63.158 0.00 0.00 0.00 4.85
272 273 1.612395 GCTCTCTCTCCCCACACCAG 61.612 65.000 0.00 0.00 0.00 4.00
274 275 1.610673 TGCTCTCTCTCCCCACACC 60.611 63.158 0.00 0.00 0.00 4.16
276 277 0.902048 CACTGCTCTCTCTCCCCACA 60.902 60.000 0.00 0.00 0.00 4.17
277 278 0.902516 ACACTGCTCTCTCTCCCCAC 60.903 60.000 0.00 0.00 0.00 4.61
278 279 0.902048 CACACTGCTCTCTCTCCCCA 60.902 60.000 0.00 0.00 0.00 4.96
279 280 1.896694 CACACTGCTCTCTCTCCCC 59.103 63.158 0.00 0.00 0.00 4.81
280 281 1.217779 GCACACTGCTCTCTCTCCC 59.782 63.158 0.00 0.00 40.96 4.30
282 283 1.970639 TGGCACACTGCTCTCTCTC 59.029 57.895 0.00 0.00 44.28 3.20
283 284 4.204970 TGGCACACTGCTCTCTCT 57.795 55.556 0.00 0.00 44.28 3.10
319 320 4.394712 CAGTGCTCCGTCCCCACC 62.395 72.222 0.00 0.00 0.00 4.61
339 340 2.831742 TAGTGTAGGGCGCGGAGG 60.832 66.667 8.83 0.00 0.00 4.30
340 341 2.412112 GTAGTGTAGGGCGCGGAG 59.588 66.667 8.83 0.00 0.00 4.63
341 342 3.142838 GGTAGTGTAGGGCGCGGA 61.143 66.667 8.83 0.00 0.00 5.54
342 343 4.564116 CGGTAGTGTAGGGCGCGG 62.564 72.222 8.83 0.00 0.00 6.46
343 344 4.564116 CCGGTAGTGTAGGGCGCG 62.564 72.222 0.00 0.00 0.00 6.86
344 345 3.421687 GACCGGTAGTGTAGGGCGC 62.422 68.421 7.34 0.00 0.00 6.53
345 346 2.803479 GACCGGTAGTGTAGGGCG 59.197 66.667 7.34 0.00 0.00 6.13
346 347 1.315257 TTCGACCGGTAGTGTAGGGC 61.315 60.000 7.34 0.00 0.00 5.19
347 348 0.737219 CTTCGACCGGTAGTGTAGGG 59.263 60.000 7.34 0.00 0.00 3.53
348 349 1.669779 CTCTTCGACCGGTAGTGTAGG 59.330 57.143 7.34 0.00 0.00 3.18
349 350 2.608546 CTCTCTTCGACCGGTAGTGTAG 59.391 54.545 7.34 7.46 0.00 2.74
350 351 2.625737 CTCTCTTCGACCGGTAGTGTA 58.374 52.381 7.34 0.00 0.00 2.90
351 352 1.451067 CTCTCTTCGACCGGTAGTGT 58.549 55.000 7.34 0.00 0.00 3.55
352 353 0.733729 CCTCTCTTCGACCGGTAGTG 59.266 60.000 7.34 2.35 0.00 2.74
354 355 1.726533 GCCCTCTCTTCGACCGGTAG 61.727 65.000 7.34 8.08 0.00 3.18
355 356 1.751927 GCCCTCTCTTCGACCGGTA 60.752 63.158 7.34 0.00 0.00 4.02
357 358 4.194720 CGCCCTCTCTTCGACCGG 62.195 72.222 0.00 0.00 0.00 5.28
358 359 3.398353 GACGCCCTCTCTTCGACCG 62.398 68.421 0.00 0.00 0.00 4.79
359 360 2.490685 GACGCCCTCTCTTCGACC 59.509 66.667 0.00 0.00 0.00 4.79
360 361 2.100603 CGACGCCCTCTCTTCGAC 59.899 66.667 0.00 0.00 33.20 4.20
361 362 3.132139 CCGACGCCCTCTCTTCGA 61.132 66.667 0.00 0.00 33.20 3.71
362 363 4.194720 CCCGACGCCCTCTCTTCG 62.195 72.222 0.00 0.00 0.00 3.79
383 384 4.868116 AAAGTGGTGGTGCGCCGT 62.868 61.111 12.58 0.00 36.72 5.68
384 385 4.025401 GAAAGTGGTGGTGCGCCG 62.025 66.667 12.58 0.00 36.72 6.46
386 387 0.317854 GAAAGAAAGTGGTGGTGCGC 60.318 55.000 0.00 0.00 0.00 6.09
387 388 0.041312 CGAAAGAAAGTGGTGGTGCG 60.041 55.000 0.00 0.00 0.00 5.34
389 390 1.264288 GAGCGAAAGAAAGTGGTGGTG 59.736 52.381 0.00 0.00 0.00 4.17
390 391 1.594331 GAGCGAAAGAAAGTGGTGGT 58.406 50.000 0.00 0.00 0.00 4.16
391 392 0.512952 CGAGCGAAAGAAAGTGGTGG 59.487 55.000 0.00 0.00 0.00 4.61
393 394 0.602905 CCCGAGCGAAAGAAAGTGGT 60.603 55.000 0.00 0.00 0.00 4.16
394 395 0.602905 ACCCGAGCGAAAGAAAGTGG 60.603 55.000 0.00 0.00 0.00 4.00
395 396 0.512952 CACCCGAGCGAAAGAAAGTG 59.487 55.000 0.00 0.00 0.00 3.16
396 397 0.602905 CCACCCGAGCGAAAGAAAGT 60.603 55.000 0.00 0.00 0.00 2.66
397 398 1.912371 GCCACCCGAGCGAAAGAAAG 61.912 60.000 0.00 0.00 0.00 2.62
416 417 4.227134 CATCGGTCCCTCCCTGCG 62.227 72.222 0.00 0.00 0.00 5.18
417 418 3.866582 CCATCGGTCCCTCCCTGC 61.867 72.222 0.00 0.00 0.00 4.85
418 419 3.164269 CCCATCGGTCCCTCCCTG 61.164 72.222 0.00 0.00 0.00 4.45
419 420 3.364964 TCCCATCGGTCCCTCCCT 61.365 66.667 0.00 0.00 0.00 4.20
420 421 2.844839 CTCCCATCGGTCCCTCCC 60.845 72.222 0.00 0.00 0.00 4.30
421 422 3.551407 GCTCCCATCGGTCCCTCC 61.551 72.222 0.00 0.00 0.00 4.30
422 423 3.917760 CGCTCCCATCGGTCCCTC 61.918 72.222 0.00 0.00 0.00 4.30
423 424 4.458829 TCGCTCCCATCGGTCCCT 62.459 66.667 0.00 0.00 0.00 4.20
425 426 4.222847 GGTCGCTCCCATCGGTCC 62.223 72.222 0.00 0.00 0.00 4.46
426 427 3.458163 TGGTCGCTCCCATCGGTC 61.458 66.667 0.00 0.00 34.77 4.79
427 428 3.771160 GTGGTCGCTCCCATCGGT 61.771 66.667 0.00 0.00 36.74 4.69
428 429 3.019003 AAGTGGTCGCTCCCATCGG 62.019 63.158 0.00 0.00 36.74 4.18
429 430 1.811266 CAAGTGGTCGCTCCCATCG 60.811 63.158 0.00 0.00 36.74 3.84
431 432 1.296715 GACAAGTGGTCGCTCCCAT 59.703 57.895 0.00 0.00 36.65 4.00
440 441 0.473886 ACCCCTAGCTGACAAGTGGT 60.474 55.000 0.00 0.00 0.00 4.16
442 443 0.036010 CCACCCCTAGCTGACAAGTG 60.036 60.000 0.00 0.00 0.00 3.16
443 444 0.473886 ACCACCCCTAGCTGACAAGT 60.474 55.000 0.00 0.00 0.00 3.16
445 446 0.472925 TCACCACCCCTAGCTGACAA 60.473 55.000 0.00 0.00 0.00 3.18
446 447 0.904865 CTCACCACCCCTAGCTGACA 60.905 60.000 0.00 0.00 0.00 3.58
447 448 1.617947 CCTCACCACCCCTAGCTGAC 61.618 65.000 0.00 0.00 0.00 3.51
448 449 1.306141 CCTCACCACCCCTAGCTGA 60.306 63.158 0.00 0.00 0.00 4.26
449 450 2.370445 CCCTCACCACCCCTAGCTG 61.370 68.421 0.00 0.00 0.00 4.24
451 452 2.040606 TCCCTCACCACCCCTAGC 59.959 66.667 0.00 0.00 0.00 3.42
452 453 2.066999 GCTCCCTCACCACCCCTAG 61.067 68.421 0.00 0.00 0.00 3.02
456 457 4.394712 CACGCTCCCTCACCACCC 62.395 72.222 0.00 0.00 0.00 4.61
457 458 4.394712 CCACGCTCCCTCACCACC 62.395 72.222 0.00 0.00 0.00 4.61
493 494 0.463833 TGAGATCCTACTCGCGCTGA 60.464 55.000 5.56 3.55 39.49 4.26
495 496 1.791103 GCTGAGATCCTACTCGCGCT 61.791 60.000 5.56 0.00 39.49 5.92
496 497 1.371145 GCTGAGATCCTACTCGCGC 60.371 63.158 0.00 0.00 39.49 6.86
497 498 1.284408 GGCTGAGATCCTACTCGCG 59.716 63.158 0.00 0.00 39.49 5.87
498 499 0.031449 GTGGCTGAGATCCTACTCGC 59.969 60.000 0.00 0.00 39.49 5.03
500 501 1.068434 GCAGTGGCTGAGATCCTACTC 59.932 57.143 0.00 0.00 36.96 2.59
504 505 3.318191 GGCAGTGGCTGAGATCCT 58.682 61.111 9.90 0.00 40.87 3.24
514 515 4.012895 GTCACGCAACGGCAGTGG 62.013 66.667 0.00 0.00 41.55 4.00
516 517 3.269347 GTGTCACGCAACGGCAGT 61.269 61.111 0.00 0.00 41.24 4.40
517 518 2.967076 AGTGTCACGCAACGGCAG 60.967 61.111 0.00 0.00 41.24 4.85
518 519 3.268603 CAGTGTCACGCAACGGCA 61.269 61.111 0.00 0.00 41.24 5.69
519 520 1.841663 ATTCAGTGTCACGCAACGGC 61.842 55.000 0.00 0.00 0.00 5.68
520 521 0.586319 AATTCAGTGTCACGCAACGG 59.414 50.000 0.00 0.00 0.00 4.44
521 522 2.729360 TCTAATTCAGTGTCACGCAACG 59.271 45.455 0.00 0.00 0.00 4.10
522 523 3.741344 ACTCTAATTCAGTGTCACGCAAC 59.259 43.478 0.00 0.00 0.00 4.17
523 524 3.990092 ACTCTAATTCAGTGTCACGCAA 58.010 40.909 0.00 0.00 0.00 4.85
524 525 3.660501 ACTCTAATTCAGTGTCACGCA 57.339 42.857 0.00 0.00 0.00 5.24
525 526 3.542704 CGTACTCTAATTCAGTGTCACGC 59.457 47.826 0.00 0.00 33.19 5.34
526 527 4.553815 CACGTACTCTAATTCAGTGTCACG 59.446 45.833 0.00 8.61 35.84 4.35
528 529 4.763279 TCCACGTACTCTAATTCAGTGTCA 59.237 41.667 0.00 0.00 33.19 3.58
529 530 5.306532 TCCACGTACTCTAATTCAGTGTC 57.693 43.478 0.00 0.00 33.19 3.67
530 531 5.185249 ACATCCACGTACTCTAATTCAGTGT 59.815 40.000 0.00 0.00 35.26 3.55
531 532 5.651530 ACATCCACGTACTCTAATTCAGTG 58.348 41.667 0.00 0.00 0.00 3.66
532 533 5.916661 ACATCCACGTACTCTAATTCAGT 57.083 39.130 0.00 0.00 0.00 3.41
533 534 6.418226 GCTTACATCCACGTACTCTAATTCAG 59.582 42.308 0.00 0.00 0.00 3.02
534 535 6.270815 GCTTACATCCACGTACTCTAATTCA 58.729 40.000 0.00 0.00 0.00 2.57
535 536 5.690857 GGCTTACATCCACGTACTCTAATTC 59.309 44.000 0.00 0.00 0.00 2.17
536 537 5.598769 GGCTTACATCCACGTACTCTAATT 58.401 41.667 0.00 0.00 0.00 1.40
539 540 2.615447 CGGCTTACATCCACGTACTCTA 59.385 50.000 0.00 0.00 0.00 2.43
540 541 1.404391 CGGCTTACATCCACGTACTCT 59.596 52.381 0.00 0.00 0.00 3.24
542 543 0.179119 GCGGCTTACATCCACGTACT 60.179 55.000 0.00 0.00 0.00 2.73
544 545 0.246910 TTGCGGCTTACATCCACGTA 59.753 50.000 0.00 0.00 0.00 3.57
545 546 1.004320 TTGCGGCTTACATCCACGT 60.004 52.632 0.00 0.00 0.00 4.49
546 547 1.423845 GTTGCGGCTTACATCCACG 59.576 57.895 0.00 0.00 0.00 4.94
547 548 1.017177 TCGTTGCGGCTTACATCCAC 61.017 55.000 0.00 0.00 0.00 4.02
548 549 1.017177 GTCGTTGCGGCTTACATCCA 61.017 55.000 0.00 0.00 0.00 3.41
549 550 1.713830 GTCGTTGCGGCTTACATCC 59.286 57.895 0.00 0.00 0.00 3.51
553 554 3.067846 GCTCGTCGTTGCGGCTTAC 62.068 63.158 0.00 0.00 0.00 2.34
554 555 2.807895 GCTCGTCGTTGCGGCTTA 60.808 61.111 0.00 0.00 0.00 3.09
572 573 4.802051 CATGAGGCACCACCCCGG 62.802 72.222 0.00 0.00 40.58 5.73
575 576 1.152881 GATCCATGAGGCACCACCC 60.153 63.158 0.00 0.00 40.58 4.61
576 577 0.257039 AAGATCCATGAGGCACCACC 59.743 55.000 0.00 0.00 39.61 4.61
577 578 1.340405 ACAAGATCCATGAGGCACCAC 60.340 52.381 0.00 0.00 33.74 4.16
578 579 0.994247 ACAAGATCCATGAGGCACCA 59.006 50.000 0.00 0.00 33.74 4.17
579 580 2.843701 CTACAAGATCCATGAGGCACC 58.156 52.381 0.00 0.00 33.74 5.01
580 581 2.216898 GCTACAAGATCCATGAGGCAC 58.783 52.381 0.00 0.00 33.74 5.01
581 582 1.202568 CGCTACAAGATCCATGAGGCA 60.203 52.381 0.00 0.00 33.74 4.75
584 585 1.506493 GGCGCTACAAGATCCATGAG 58.494 55.000 7.64 0.00 0.00 2.90
585 586 0.249447 CGGCGCTACAAGATCCATGA 60.249 55.000 7.64 0.00 0.00 3.07
586 587 1.835483 GCGGCGCTACAAGATCCATG 61.835 60.000 26.86 0.00 0.00 3.66
587 588 1.595382 GCGGCGCTACAAGATCCAT 60.595 57.895 26.86 0.00 0.00 3.41
589 590 2.967615 GGCGGCGCTACAAGATCC 60.968 66.667 32.30 7.60 0.00 3.36
608 609 1.660167 TTCAGATCAAGCAGGCGATG 58.340 50.000 0.00 0.00 0.00 3.84
609 610 2.286872 CTTTCAGATCAAGCAGGCGAT 58.713 47.619 0.00 0.00 0.00 4.58
610 611 1.730501 CTTTCAGATCAAGCAGGCGA 58.269 50.000 0.00 0.00 0.00 5.54
616 617 1.471684 CTGTGGGCTTTCAGATCAAGC 59.528 52.381 7.55 7.55 45.13 4.01
618 619 2.205022 CCTGTGGGCTTTCAGATCAA 57.795 50.000 0.00 0.00 34.02 2.57
631 632 0.758685 CTCTCCTCCCTAGCCTGTGG 60.759 65.000 0.00 0.00 0.00 4.17
632 633 0.758685 CCTCTCCTCCCTAGCCTGTG 60.759 65.000 0.00 0.00 0.00 3.66
634 635 0.178964 CTCCTCTCCTCCCTAGCCTG 60.179 65.000 0.00 0.00 0.00 4.85
635 636 1.368268 CCTCCTCTCCTCCCTAGCCT 61.368 65.000 0.00 0.00 0.00 4.58
637 638 1.155155 CCCTCCTCTCCTCCCTAGC 59.845 68.421 0.00 0.00 0.00 3.42
638 639 0.777446 CTCCCTCCTCTCCTCCCTAG 59.223 65.000 0.00 0.00 0.00 3.02
640 641 0.330431 ATCTCCCTCCTCTCCTCCCT 60.330 60.000 0.00 0.00 0.00 4.20
643 644 0.560688 ACCATCTCCCTCCTCTCCTC 59.439 60.000 0.00 0.00 0.00 3.71
644 645 0.264359 CACCATCTCCCTCCTCTCCT 59.736 60.000 0.00 0.00 0.00 3.69
646 647 0.762461 CCCACCATCTCCCTCCTCTC 60.762 65.000 0.00 0.00 0.00 3.20
648 649 2.447714 GCCCACCATCTCCCTCCTC 61.448 68.421 0.00 0.00 0.00 3.71
649 650 2.367512 GCCCACCATCTCCCTCCT 60.368 66.667 0.00 0.00 0.00 3.69
650 651 3.866582 CGCCCACCATCTCCCTCC 61.867 72.222 0.00 0.00 0.00 4.30
651 652 3.866582 CCGCCCACCATCTCCCTC 61.867 72.222 0.00 0.00 0.00 4.30
653 654 2.766651 TACCGCCCACCATCTCCC 60.767 66.667 0.00 0.00 0.00 4.30
654 655 2.808206 CCTACCGCCCACCATCTCC 61.808 68.421 0.00 0.00 0.00 3.71
655 656 2.822399 CCTACCGCCCACCATCTC 59.178 66.667 0.00 0.00 0.00 2.75
656 657 3.480133 GCCTACCGCCCACCATCT 61.480 66.667 0.00 0.00 0.00 2.90
657 658 4.910585 CGCCTACCGCCCACCATC 62.911 72.222 0.00 0.00 0.00 3.51
661 662 4.217159 CTACCGCCTACCGCCCAC 62.217 72.222 0.00 0.00 35.03 4.61
665 666 4.587189 CCAGCTACCGCCTACCGC 62.587 72.222 0.00 0.00 36.60 5.68
666 667 3.912907 CCCAGCTACCGCCTACCG 61.913 72.222 0.00 0.00 36.60 4.02
667 668 2.443390 TCCCAGCTACCGCCTACC 60.443 66.667 0.00 0.00 36.60 3.18
668 669 2.499827 CCTCCCAGCTACCGCCTAC 61.500 68.421 0.00 0.00 36.60 3.18
669 670 2.123425 CCTCCCAGCTACCGCCTA 60.123 66.667 0.00 0.00 36.60 3.93
673 674 4.475444 TCCCCCTCCCAGCTACCG 62.475 72.222 0.00 0.00 0.00 4.02
674 675 2.446802 CTCCCCCTCCCAGCTACC 60.447 72.222 0.00 0.00 0.00 3.18
675 676 1.762858 GTCTCCCCCTCCCAGCTAC 60.763 68.421 0.00 0.00 0.00 3.58
676 677 2.696893 GTCTCCCCCTCCCAGCTA 59.303 66.667 0.00 0.00 0.00 3.32
677 678 4.787280 CGTCTCCCCCTCCCAGCT 62.787 72.222 0.00 0.00 0.00 4.24
687 688 4.078516 CAACCGTCCCCGTCTCCC 62.079 72.222 0.00 0.00 0.00 4.30
688 689 4.754667 GCAACCGTCCCCGTCTCC 62.755 72.222 0.00 0.00 0.00 3.71
696 697 3.361977 AATGCACCGCAACCGTCC 61.362 61.111 0.00 0.00 43.62 4.79
698 699 3.669344 CCAATGCACCGCAACCGT 61.669 61.111 0.00 0.00 43.62 4.83
699 700 3.326889 CTCCAATGCACCGCAACCG 62.327 63.158 0.00 0.00 43.62 4.44
700 701 1.315257 ATCTCCAATGCACCGCAACC 61.315 55.000 0.00 0.00 43.62 3.77
702 703 1.314534 CCATCTCCAATGCACCGCAA 61.315 55.000 0.00 0.00 43.62 4.85
704 705 2.484062 CCCATCTCCAATGCACCGC 61.484 63.158 0.00 0.00 0.00 5.68
705 706 0.394216 TTCCCATCTCCAATGCACCG 60.394 55.000 0.00 0.00 0.00 4.94
706 707 1.106285 GTTCCCATCTCCAATGCACC 58.894 55.000 0.00 0.00 0.00 5.01
707 708 1.106285 GGTTCCCATCTCCAATGCAC 58.894 55.000 0.00 0.00 0.00 4.57
708 709 1.002069 AGGTTCCCATCTCCAATGCA 58.998 50.000 0.00 0.00 0.00 3.96
709 710 1.685148 GAGGTTCCCATCTCCAATGC 58.315 55.000 0.00 0.00 0.00 3.56
710 711 1.475751 CCGAGGTTCCCATCTCCAATG 60.476 57.143 0.00 0.00 0.00 2.82
711 712 0.839946 CCGAGGTTCCCATCTCCAAT 59.160 55.000 0.00 0.00 0.00 3.16
715 716 1.342819 CATCTCCGAGGTTCCCATCTC 59.657 57.143 0.00 0.00 0.00 2.75
716 717 1.418334 CATCTCCGAGGTTCCCATCT 58.582 55.000 0.00 0.00 0.00 2.90
717 718 0.394565 CCATCTCCGAGGTTCCCATC 59.605 60.000 0.00 0.00 0.00 3.51
718 719 1.056700 CCCATCTCCGAGGTTCCCAT 61.057 60.000 0.00 0.00 0.00 4.00
719 720 1.689233 CCCATCTCCGAGGTTCCCA 60.689 63.158 0.00 0.00 0.00 4.37
720 721 2.444256 CCCCATCTCCGAGGTTCCC 61.444 68.421 0.00 0.00 0.00 3.97
721 722 3.108288 GCCCCATCTCCGAGGTTCC 62.108 68.421 0.00 0.00 0.00 3.62
722 723 2.506472 GCCCCATCTCCGAGGTTC 59.494 66.667 0.00 0.00 0.00 3.62
725 726 3.554342 CAGGCCCCATCTCCGAGG 61.554 72.222 0.00 0.00 0.00 4.63
726 727 3.554342 CCAGGCCCCATCTCCGAG 61.554 72.222 0.00 0.00 0.00 4.63
745 746 2.437716 TTCTTTCCCCGATGCGCC 60.438 61.111 4.18 0.00 0.00 6.53
748 749 0.107459 AGCTCTTCTTTCCCCGATGC 60.107 55.000 0.00 0.00 0.00 3.91
749 750 2.695666 TCTAGCTCTTCTTTCCCCGATG 59.304 50.000 0.00 0.00 0.00 3.84
750 751 2.962421 CTCTAGCTCTTCTTTCCCCGAT 59.038 50.000 0.00 0.00 0.00 4.18
751 752 2.379972 CTCTAGCTCTTCTTTCCCCGA 58.620 52.381 0.00 0.00 0.00 5.14
753 754 2.753247 TCCTCTAGCTCTTCTTTCCCC 58.247 52.381 0.00 0.00 0.00 4.81
754 755 4.027437 TCTTCCTCTAGCTCTTCTTTCCC 58.973 47.826 0.00 0.00 0.00 3.97
755 756 4.709886 AGTCTTCCTCTAGCTCTTCTTTCC 59.290 45.833 0.00 0.00 0.00 3.13
756 757 5.650543 CAGTCTTCCTCTAGCTCTTCTTTC 58.349 45.833 0.00 0.00 0.00 2.62
758 759 3.447229 GCAGTCTTCCTCTAGCTCTTCTT 59.553 47.826 0.00 0.00 0.00 2.52
759 760 3.023832 GCAGTCTTCCTCTAGCTCTTCT 58.976 50.000 0.00 0.00 0.00 2.85
763 764 0.383949 CGGCAGTCTTCCTCTAGCTC 59.616 60.000 0.00 0.00 0.00 4.09
764 765 1.671901 GCGGCAGTCTTCCTCTAGCT 61.672 60.000 0.00 0.00 0.00 3.32
765 766 1.227118 GCGGCAGTCTTCCTCTAGC 60.227 63.158 0.00 0.00 0.00 3.42
766 767 0.749649 ATGCGGCAGTCTTCCTCTAG 59.250 55.000 9.25 0.00 0.00 2.43
767 768 0.747255 GATGCGGCAGTCTTCCTCTA 59.253 55.000 9.25 0.00 0.00 2.43
768 769 1.519719 GATGCGGCAGTCTTCCTCT 59.480 57.895 9.25 0.00 0.00 3.69
769 770 1.880340 CGATGCGGCAGTCTTCCTC 60.880 63.158 9.25 0.00 0.00 3.71
770 771 2.185350 CGATGCGGCAGTCTTCCT 59.815 61.111 9.25 0.00 0.00 3.36
771 772 2.892425 CCGATGCGGCAGTCTTCC 60.892 66.667 9.25 0.00 41.17 3.46
773 774 3.376935 CTCCCGATGCGGCAGTCTT 62.377 63.158 9.25 0.00 46.86 3.01
774 775 3.842923 CTCCCGATGCGGCAGTCT 61.843 66.667 9.25 0.00 46.86 3.24
775 776 4.899239 CCTCCCGATGCGGCAGTC 62.899 72.222 9.25 5.65 46.86 3.51
781 782 3.723235 CTGTCACCCTCCCGATGCG 62.723 68.421 0.00 0.00 0.00 4.73
783 784 1.704641 TATCTGTCACCCTCCCGATG 58.295 55.000 0.00 0.00 0.00 3.84
784 785 2.091278 TCTTATCTGTCACCCTCCCGAT 60.091 50.000 0.00 0.00 0.00 4.18
787 788 2.043227 CCTCTTATCTGTCACCCTCCC 58.957 57.143 0.00 0.00 0.00 4.30
788 789 2.432510 CACCTCTTATCTGTCACCCTCC 59.567 54.545 0.00 0.00 0.00 4.30
789 790 3.131400 GTCACCTCTTATCTGTCACCCTC 59.869 52.174 0.00 0.00 0.00 4.30
790 791 3.100671 GTCACCTCTTATCTGTCACCCT 58.899 50.000 0.00 0.00 0.00 4.34
791 792 2.168728 GGTCACCTCTTATCTGTCACCC 59.831 54.545 0.00 0.00 0.00 4.61
792 793 2.832129 TGGTCACCTCTTATCTGTCACC 59.168 50.000 0.00 0.00 0.00 4.02
793 794 3.118956 CCTGGTCACCTCTTATCTGTCAC 60.119 52.174 0.00 0.00 0.00 3.67
795 796 3.100671 ACCTGGTCACCTCTTATCTGTC 58.899 50.000 0.00 0.00 0.00 3.51
796 797 2.834549 CACCTGGTCACCTCTTATCTGT 59.165 50.000 0.00 0.00 0.00 3.41
797 798 2.169352 CCACCTGGTCACCTCTTATCTG 59.831 54.545 0.00 0.00 0.00 2.90
798 799 2.472029 CCACCTGGTCACCTCTTATCT 58.528 52.381 0.00 0.00 0.00 1.98
799 800 1.486726 CCCACCTGGTCACCTCTTATC 59.513 57.143 0.00 0.00 0.00 1.75
800 801 1.584724 CCCACCTGGTCACCTCTTAT 58.415 55.000 0.00 0.00 0.00 1.73
801 802 3.082619 CCCACCTGGTCACCTCTTA 57.917 57.895 0.00 0.00 0.00 2.10
811 812 2.117423 GAAACCCCACCCACCTGG 59.883 66.667 0.00 0.00 41.37 4.45
813 814 3.576259 CGGAAACCCCACCCACCT 61.576 66.667 0.00 0.00 34.14 4.00
814 815 3.572222 TCGGAAACCCCACCCACC 61.572 66.667 0.00 0.00 34.14 4.61
817 818 4.710167 CGGTCGGAAACCCCACCC 62.710 72.222 0.00 0.00 46.27 4.61
818 819 2.582493 TACGGTCGGAAACCCCACC 61.582 63.158 0.00 0.00 46.27 4.61
819 820 1.374631 GTACGGTCGGAAACCCCAC 60.375 63.158 0.00 0.00 46.27 4.61
820 821 2.929903 CGTACGGTCGGAAACCCCA 61.930 63.158 7.57 0.00 46.27 4.96
821 822 2.125952 CGTACGGTCGGAAACCCC 60.126 66.667 7.57 0.00 46.27 4.95
822 823 1.444383 GTCGTACGGTCGGAAACCC 60.444 63.158 16.52 0.00 46.27 4.11
823 824 1.003769 GTGTCGTACGGTCGGAAACC 61.004 60.000 16.52 0.00 45.45 3.27
824 825 1.003769 GGTGTCGTACGGTCGGAAAC 61.004 60.000 16.52 4.70 0.00 2.78
826 827 1.600636 AGGTGTCGTACGGTCGGAA 60.601 57.895 16.52 0.00 0.00 4.30
830 831 0.386478 GTGTCAGGTGTCGTACGGTC 60.386 60.000 16.52 9.73 0.00 4.79
832 833 1.080974 GGTGTCAGGTGTCGTACGG 60.081 63.158 16.52 0.00 0.00 4.02
833 834 1.080974 GGGTGTCAGGTGTCGTACG 60.081 63.158 9.53 9.53 0.00 3.67
834 835 1.291272 GGGGTGTCAGGTGTCGTAC 59.709 63.158 0.00 0.00 0.00 3.67
836 837 3.239253 GGGGGTGTCAGGTGTCGT 61.239 66.667 0.00 0.00 0.00 4.34
837 838 4.373116 CGGGGGTGTCAGGTGTCG 62.373 72.222 0.00 0.00 0.00 4.35
839 840 2.203938 ATCGGGGGTGTCAGGTGT 60.204 61.111 0.00 0.00 0.00 4.16
841 842 1.990060 CAGATCGGGGGTGTCAGGT 60.990 63.158 0.00 0.00 0.00 4.00
842 843 2.735772 CCAGATCGGGGGTGTCAGG 61.736 68.421 3.59 0.00 0.00 3.86
843 844 1.050988 ATCCAGATCGGGGGTGTCAG 61.051 60.000 12.28 0.00 34.36 3.51
845 846 1.749033 GATCCAGATCGGGGGTGTC 59.251 63.158 12.28 2.47 34.36 3.67
846 847 1.766461 GGATCCAGATCGGGGGTGT 60.766 63.158 12.28 0.00 38.69 4.16
847 848 2.872388 CGGATCCAGATCGGGGGTG 61.872 68.421 13.41 0.00 38.69 4.61
848 849 2.524394 CGGATCCAGATCGGGGGT 60.524 66.667 13.41 1.62 38.69 4.95
851 852 2.645567 CGTCGGATCCAGATCGGG 59.354 66.667 13.41 5.39 38.69 5.14
855 856 3.449349 GAGCCGTCGGATCCAGAT 58.551 61.111 18.86 0.00 31.04 2.90
878 879 2.975799 TTTTCCCGAGCGCACACC 60.976 61.111 11.47 0.00 0.00 4.16
879 880 2.251371 GTTTTCCCGAGCGCACAC 59.749 61.111 11.47 0.00 0.00 3.82
881 882 2.251371 GTGTTTTCCCGAGCGCAC 59.749 61.111 11.47 0.96 0.00 5.34
883 884 4.736631 GCGTGTTTTCCCGAGCGC 62.737 66.667 0.00 0.00 38.15 5.92
884 885 4.084888 GGCGTGTTTTCCCGAGCG 62.085 66.667 0.00 0.00 0.00 5.03
885 886 3.733960 GGGCGTGTTTTCCCGAGC 61.734 66.667 0.00 0.00 32.00 5.03
891 892 3.733960 GAGGGCGGGCGTGTTTTC 61.734 66.667 0.08 0.00 0.00 2.29
892 893 4.572571 TGAGGGCGGGCGTGTTTT 62.573 61.111 0.08 0.00 0.00 2.43
902 903 3.958147 AATGCAGACGGTGAGGGCG 62.958 63.158 0.00 0.00 0.00 6.13
1895 2405 8.084590 TGTTTAAGAAGCTTTTACTGCTCTAC 57.915 34.615 0.00 0.00 40.22 2.59
1917 2427 6.921307 GGAAAGAACAAAATACATCCGTTGTT 59.079 34.615 0.54 0.54 44.61 2.83
2015 2525 8.696043 AACCTGCAACATACATCATATTATGT 57.304 30.769 7.63 7.63 42.62 2.29
2315 2826 6.896307 AGTGGTAGTTACCTTGTAGAAGCTAT 59.104 38.462 9.58 0.00 46.58 2.97
2391 3065 4.754322 TGAAGCACTTCGTCTTGCATATA 58.246 39.130 5.95 0.00 42.28 0.86
2503 3177 7.979537 TGCGTTCTAGATACTAAATCACACAAT 59.020 33.333 0.00 0.00 0.00 2.71
2523 3197 0.950555 TGCAGTGACTCCATGCGTTC 60.951 55.000 0.00 0.00 42.92 3.95
2524 3198 1.071299 TGCAGTGACTCCATGCGTT 59.929 52.632 0.00 0.00 42.92 4.84
2525 3199 1.669115 GTGCAGTGACTCCATGCGT 60.669 57.895 0.00 0.00 42.92 5.24
2767 3536 7.066142 TCAAGGCATCCTAAATAAAGGCATTA 58.934 34.615 0.00 0.00 36.51 1.90
2768 3537 5.898972 TCAAGGCATCCTAAATAAAGGCATT 59.101 36.000 0.00 0.00 36.51 3.56
2769 3538 5.457686 TCAAGGCATCCTAAATAAAGGCAT 58.542 37.500 0.00 0.00 36.51 4.40
2770 3539 4.865905 TCAAGGCATCCTAAATAAAGGCA 58.134 39.130 0.00 0.00 36.51 4.75
2771 3540 5.852282 TTCAAGGCATCCTAAATAAAGGC 57.148 39.130 0.00 0.00 36.51 4.35
2821 3590 1.405821 AGTACTGCACGCCATAGAGAC 59.594 52.381 0.00 0.00 0.00 3.36
2858 3627 2.156917 CATCAGAAGTTCCTGCAGCAA 58.843 47.619 8.66 0.00 34.28 3.91
2923 3692 4.563184 CGCCACTTCAGATTTACAGTAGTC 59.437 45.833 0.00 0.00 0.00 2.59
2945 3714 1.455786 CTTCTCCGTTGCTTGTACACG 59.544 52.381 0.00 0.00 0.00 4.49
2988 3758 4.974399 AGTCGAAGAGTTGGGAGAATTTT 58.026 39.130 0.00 0.00 36.34 1.82
3006 3776 7.507304 ACACATAACGAAGAACAATAAAGTCG 58.493 34.615 0.00 0.00 34.77 4.18
3179 3949 9.877178 CATCTATTGGATACCTTAGATACAACC 57.123 37.037 0.00 0.00 32.26 3.77
3239 4009 2.346766 TCTTTGCACAAGCTCCAAGA 57.653 45.000 0.00 0.00 42.74 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.