AutoCloner

Multiple sequence alignment - TraesCS2A01G236700

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BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G236700	chr2A	100.000	6118	0	0	1	6118	305383805	305389922	0.000000e+00	11298.0
1	TraesCS2A01G236700	chr2A	96.453	592	21	0	331	922	236853751	236853160	0.000000e+00	977.0
2	TraesCS2A01G236700	chr2A	95.424	590	26	1	332	921	344560093	344560681	0.000000e+00	939.0
3	TraesCS2A01G236700	chr2A	94.924	591	26	4	331	921	467582693	467582107	0.000000e+00	922.0
4	TraesCS2A01G236700	chr2A	94.435	593	33	0	331	923	344568566	344569158	0.000000e+00	913.0
5	TraesCS2A01G236700	chr2A	88.005	792	61	17	4992	5774	168432530	168433296	0.000000e+00	905.0
6	TraesCS2A01G236700	chr2A	96.073	331	12	1	1	331	229667325	229667654	6.980000e-149	538.0
7	TraesCS2A01G236700	chr2A	95.468	331	13	2	1	331	253748836	253749164	1.510000e-145	527.0
8	TraesCS2A01G236700	chr2A	95.468	331	14	1	1	331	533357087	533357416	1.510000e-145	527.0
9	TraesCS2A01G236700	chr2A	95.195	333	15	1	1	333	456952464	456952795	5.430000e-145	525.0
10	TraesCS2A01G236700	chr5A	96.429	3920	114	9	922	4823	425250122	425254033	0.000000e+00	6440.0
11	TraesCS2A01G236700	chr5A	88.858	718	47	17	4982	5691	228899347	228900039	0.000000e+00	852.0
12	TraesCS2A01G236700	chr5A	89.531	554	46	10	4314	4861	178778630	178779177	0.000000e+00	691.0
13	TraesCS2A01G236700	chr5A	95.770	331	12	2	1	331	156988043	156988371	3.250000e-147	532.0
14	TraesCS2A01G236700	chr5A	95.468	331	13	2	1	331	151605204	151604876	1.510000e-145	527.0
15	TraesCS2A01G236700	chr5A	95.468	331	14	1	1	331	267561657	267561986	1.510000e-145	527.0
16	TraesCS2A01G236700	chr5A	95.455	330	13	2	1	330	151622626	151622299	5.430000e-145	525.0
17	TraesCS2A01G236700	chr5A	88.438	320	37	0	3991	4310	178777991	178778310	2.670000e-103	387.0
18	TraesCS2A01G236700	chr5A	93.363	226	11	2	1739	1962	18057630	18057407	1.270000e-86	331.0
19	TraesCS2A01G236700	chr5A	94.853	136	6	1	4861	4995	18056975	18056840	1.730000e-50	211.0
20	TraesCS2A01G236700	chr5A	95.833	48	2	0	1943	1990	18057228	18057181	1.830000e-10	78.7
21	TraesCS2A01G236700	chr1B	88.464	1413	113	23	4375	5774	375889008	375887633	0.000000e+00	1661.0
22	TraesCS2A01G236700	chr1B	89.814	805	57	14	4985	5774	156696552	156695758	0.000000e+00	1009.0
23	TraesCS2A01G236700	chr1B	87.826	805	67	17	4985	5774	192766846	192766058	0.000000e+00	915.0
24	TraesCS2A01G236700	chr1B	87.593	806	71	17	4985	5774	369978082	369977290	0.000000e+00	907.0
25	TraesCS2A01G236700	chr1B	90.093	646	63	1	1341	1985	375901848	375901203	0.000000e+00	837.0
26	TraesCS2A01G236700	chr1B	90.278	648	48	7	1349	1990	615489376	615490014	0.000000e+00	833.0
27	TraesCS2A01G236700	chr1B	83.438	634	82	16	5130	5750	197789297	197789920	8.900000e-158	568.0
28	TraesCS2A01G236700	chr1B	87.025	316	35	6	5133	5445	457083580	457083268	9.760000e-93	351.0
29	TraesCS2A01G236700	chr1B	86.601	306	31	8	5451	5750	134542269	134542570	4.570000e-86	329.0
30	TraesCS2A01G236700	chr1B	84.615	325	40	9	5146	5461	134541918	134542241	1.280000e-81	315.0
31	TraesCS2A01G236700	chr1B	93.525	139	8	1	4858	4995	615490217	615490355	8.040000e-49	206.0
32	TraesCS2A01G236700	chr1B	84.091	132	16	2	2241	2372	500271098	500270972	8.330000e-24	122.0
33	TraesCS2A01G236700	chr1B	89.362	94	8	1	3788	3879	531122175	531122082	3.870000e-22	117.0
34	TraesCS2A01G236700	chr1B	84.956	113	12	4	6004	6112	375887636	375887525	6.480000e-20	110.0
35	TraesCS2A01G236700	chr2B	88.652	1172	93	18	4615	5774	749572571	749571428	0.000000e+00	1391.0
36	TraesCS2A01G236700	chr2B	90.726	647	58	2	1341	1985	749575691	749575045	0.000000e+00	861.0
37	TraesCS2A01G236700	chr2B	87.170	569	65	5	2021	2586	290677435	290677998	1.860000e-179	640.0
38	TraesCS2A01G236700	chr2B	84.119	636	78	15	5130	5750	302984807	302985434	1.470000e-165	593.0
39	TraesCS2A01G236700	chr2B	84.060	596	65	16	2021	2600	193136482	193135901	1.160000e-151	547.0
40	TraesCS2A01G236700	chr2B	93.069	202	13	1	940	1140	576045708	576045507	1.670000e-75	294.0
41	TraesCS2A01G236700	chr2B	84.071	113	13	4	6004	6112	749571431	749571320	3.020000e-18	104.0
42	TraesCS2A01G236700	chr4A	95.431	591	25	2	331	921	441576666	441576078	0.000000e+00	941.0
43	TraesCS2A01G236700	chr4A	87.276	503	50	10	4314	4809	17750971	17750476	4.140000e-156	562.0
44	TraesCS2A01G236700	chr4A	96.073	331	12	1	1	331	360098315	360098644	6.980000e-149	538.0
45	TraesCS2A01G236700	chr4A	85.230	413	48	12	5370	5774	356558665	356558258	4.410000e-111	412.0
46	TraesCS2A01G236700	chr4A	92.105	76	6	0	1545	1620	191356592	191356667	2.330000e-19	108.0
47	TraesCS2A01G236700	chr1A	95.093	591	28	1	331	921	430063772	430063183	0.000000e+00	929.0
48	TraesCS2A01G236700	chr1A	89.109	101	10	1	5894	5994	157828160	157828061	2.320000e-24	124.0
49	TraesCS2A01G236700	chrUn	95.093	591	26	3	331	921	462622635	462622048	0.000000e+00	928.0
50	TraesCS2A01G236700	chrUn	90.854	656	47	6	1341	1990	357055147	357054499	0.000000e+00	867.0
51	TraesCS2A01G236700	chrUn	93.382	136	8	1	4861	4995	357054280	357054145	3.740000e-47	200.0
52	TraesCS2A01G236700	chrUn	88.421	95	9	1	3788	3880	116287318	116287224	5.010000e-21	113.0
53	TraesCS2A01G236700	chrUn	89.773	88	7	2	3788	3873	96130985	96131072	1.800000e-20	111.0
54	TraesCS2A01G236700	chrUn	89.011	91	8	1	3788	3876	115041278	115041188	1.800000e-20	111.0
55	TraesCS2A01G236700	chrUn	87.629	97	8	3	3780	3873	31220487	31220582	6.480000e-20	110.0
56	TraesCS2A01G236700	chrUn	87.912	91	9	1	3793	3881	12520376	12520286	8.390000e-19	106.0
57	TraesCS2A01G236700	chrUn	87.234	94	10	1	3789	3880	41734215	41734308	8.390000e-19	106.0
58	TraesCS2A01G236700	chrUn	87.234	94	10	1	3789	3880	141680907	141680814	8.390000e-19	106.0
59	TraesCS2A01G236700	chrUn	88.636	88	8	2	3788	3873	178663685	178663598	8.390000e-19	106.0
60	TraesCS2A01G236700	chr7A	94.915	590	28	2	331	919	160002208	160002796	0.000000e+00	922.0
61	TraesCS2A01G236700	chr7A	90.549	656	47	7	1341	1990	726240142	726239496	0.000000e+00	854.0
62	TraesCS2A01G236700	chr7A	92.893	394	24	2	1599	1990	726289056	726288665	2.470000e-158	569.0
63	TraesCS2A01G236700	chr7A	86.879	503	52	10	4314	4809	497656227	497655732	8.960000e-153	551.0
64	TraesCS2A01G236700	chr7A	93.382	136	8	1	4861	4995	726288428	726288293	3.740000e-47	200.0
65	TraesCS2A01G236700	chr7A	92.647	136	9	1	4861	4995	726239259	726239124	1.740000e-45	195.0
66	TraesCS2A01G236700	chr7A	89.474	95	8	1	3788	3880	232336872	232336966	1.080000e-22	119.0
67	TraesCS2A01G236700	chr7A	89.247	93	10	0	3788	3880	187107689	187107781	3.870000e-22	117.0
68	TraesCS2A01G236700	chr3A	94.604	593	27	5	332	921	166943509	166942919	0.000000e+00	913.0
69	TraesCS2A01G236700	chr3A	88.869	548	43	9	4322	4860	216716755	216716217	0.000000e+00	658.0
70	TraesCS2A01G236700	chr3A	89.259	270	28	1	3991	4260	216726113	216725845	2.730000e-88	337.0
71	TraesCS2A01G236700	chr4B	88.982	599	39	13	4982	5566	179437811	179438396	0.000000e+00	715.0
72	TraesCS2A01G236700	chr4B	89.688	320	32	1	3991	4310	436878085	436878403	2.050000e-109	407.0
73	TraesCS2A01G236700	chr4B	88.387	310	30	6	5469	5774	179438394	179438701	9.690000e-98	368.0
74	TraesCS2A01G236700	chr4B	88.421	285	29	2	3084	3364	54766790	54766506	2.110000e-89	340.0
75	TraesCS2A01G236700	chr4B	85.776	232	23	7	5130	5354	426878040	426878268	2.850000e-58	237.0
76	TraesCS2A01G236700	chr4B	79.213	356	45	15	2611	2964	96973576	96973248	2.870000e-53	220.0
77	TraesCS2A01G236700	chr4B	78.889	360	47	12	2614	2971	54767127	54766795	3.710000e-52	217.0
78	TraesCS2A01G236700	chr4B	86.842	152	20	0	3084	3235	96973236	96973085	2.930000e-38	171.0
79	TraesCS2A01G236700	chr4B	89.474	95	8	1	3788	3880	406389458	406389364	1.080000e-22	119.0
80	TraesCS2A01G236700	chr5B	89.587	557	45	6	4315	4862	68454028	68454580	0.000000e+00	695.0
81	TraesCS2A01G236700	chr5B	87.879	495	46	10	4322	4809	406552950	406553437	2.470000e-158	569.0
82	TraesCS2A01G236700	chr5B	87.702	496	46	11	4322	4809	78211590	78212078	1.150000e-156	564.0
83	TraesCS2A01G236700	chr5B	84.569	499	41	19	5133	5619	320637376	320636902	4.320000e-126	462.0
84	TraesCS2A01G236700	chr5B	88.785	321	35	1	3991	4310	68453387	68453707	5.750000e-105	392.0
85	TraesCS2A01G236700	chr5B	90.909	198	17	1	940	1137	170566346	170566542	1.310000e-66	265.0
86	TraesCS2A01G236700	chr5B	89.362	94	8	1	3789	3880	358271831	358271924	3.870000e-22	117.0
87	TraesCS2A01G236700	chr3B	89.214	547	43	8	4325	4862	671436967	671436428	0.000000e+00	669.0
88	TraesCS2A01G236700	chr3B	89.688	320	32	1	3991	4310	671370683	671370365	2.050000e-109	407.0
89	TraesCS2A01G236700	chr3B	89.688	320	32	1	3991	4310	671437674	671437356	2.050000e-109	407.0
90	TraesCS2A01G236700	chr3B	88.421	285	29	2	3084	3364	327390366	327390082	2.110000e-89	340.0
91	TraesCS2A01G236700	chr3B	88.421	285	29	2	3084	3364	582276632	582276348	2.110000e-89	340.0
92	TraesCS2A01G236700	chr3B	79.444	360	45	15	2614	2971	582276969	582276637	1.720000e-55	228.0
93	TraesCS2A01G236700	chr3B	79.167	360	46	15	2614	2971	327390703	327390371	7.980000e-54	222.0
94	TraesCS2A01G236700	chr3B	89.474	76	8	0	1545	1620	139391848	139391923	5.050000e-16	97.1
95	TraesCS2A01G236700	chr6D	85.174	634	75	15	5130	5750	248585939	248586566	3.110000e-177	632.0
96	TraesCS2A01G236700	chr6D	94.907	216	11	0	922	1137	178677344	178677559	7.600000e-89	339.0
97	TraesCS2A01G236700	chr6D	88.298	94	9	1	3789	3880	298453730	298453637	1.800000e-20	111.0
98	TraesCS2A01G236700	chr6D	88.298	94	9	1	3789	3880	438321734	438321827	1.800000e-20	111.0
99	TraesCS2A01G236700	chr6D	86.275	102	12	1	3781	3880	432678169	432678270	6.480000e-20	110.0
100	TraesCS2A01G236700	chr7B	83.466	629	86	13	5130	5746	499467194	499467816	2.470000e-158	569.0
101	TraesCS2A01G236700	chr7B	87.719	285	31	2	3084	3364	258617292	258617008	4.570000e-86	329.0
102	TraesCS2A01G236700	chr7B	86.147	231	25	5	5130	5354	171090147	171090376	6.130000e-60	243.0
103	TraesCS2A01G236700	chr7B	79.614	363	45	15	2611	2971	258617632	258617297	3.690000e-57	233.0
104	TraesCS2A01G236700	chr7B	89.362	94	8	1	3789	3880	155483854	155483761	3.870000e-22	117.0
105	TraesCS2A01G236700	chr2D	86.465	495	53	10	4322	4809	361388222	361388709	1.170000e-146	531.0
106	TraesCS2A01G236700	chr7D	86.290	496	52	12	4322	4809	566799945	566799458	5.430000e-145	525.0
107	TraesCS2A01G236700	chr7D	85.830	494	57	11	4322	4809	33064689	33064203	4.230000e-141	512.0
108	TraesCS2A01G236700	chr7D	88.542	96	9	2	3788	3881	110367163	110367068	1.390000e-21	115.0
109	TraesCS2A01G236700	chr7D	90.278	72	7	0	1549	1620	61278803	61278732	1.820000e-15	95.3
110	TraesCS2A01G236700	chr5D	86.290	496	52	12	4322	4809	33695671	33696158	5.430000e-145	525.0
111	TraesCS2A01G236700	chr5D	86.290	496	52	12	4322	4809	361582946	361582459	5.430000e-145	525.0
112	TraesCS2A01G236700	chr5D	86.996	223	20	6	5139	5354	228445279	228445059	6.130000e-60	243.0
113	TraesCS2A01G236700	chr5D	82.083	240	25	11	5777	6003	240857264	240857030	8.100000e-44	189.0
114	TraesCS2A01G236700	chr5D	85.621	153	12	7	2458	2600	489083464	489083616	1.060000e-32	152.0
115	TraesCS2A01G236700	chr5D	87.218	133	16	1	4864	4995	484997938	484997806	3.820000e-32	150.0
116	TraesCS2A01G236700	chr5D	85.612	139	19	1	4858	4995	33694156	33694294	1.780000e-30	145.0
117	TraesCS2A01G236700	chr5D	86.466	133	17	1	4864	4995	361584455	361584323	1.780000e-30	145.0
118	TraesCS2A01G236700	chr5D	84.286	140	19	3	4858	4995	88344937	88345075	3.850000e-27	134.0
119	TraesCS2A01G236700	chr5D	88.421	95	9	1	3788	3880	53583239	53583145	5.010000e-21	113.0
120	TraesCS2A01G236700	chr5D	86.139	101	12	1	3782	3880	384145606	384145706	2.330000e-19	108.0
121	TraesCS2A01G236700	chr3D	85.571	499	55	12	4322	4809	380275686	380275194	1.970000e-139	507.0
122	TraesCS2A01G236700	chr3D	82.629	213	23	8	5777	5978	591358237	591358446	6.300000e-40	176.0
123	TraesCS2A01G236700	chr3D	89.362	94	8	1	3789	3880	400274799	400274706	3.870000e-22	117.0
124	TraesCS2A01G236700	chr3D	88.421	95	9	1	3788	3880	200383817	200383911	5.010000e-21	113.0
125	TraesCS2A01G236700	chr4D	80.587	613	69	26	5130	5729	280925564	280926139	1.580000e-115	427.0
126	TraesCS2A01G236700	chr4D	79.077	650	67	22	5133	5774	269682633	269682045	3.460000e-102	383.0
127	TraesCS2A01G236700	chr4D	78.392	597	61	22	5133	5721	343453676	343453140	5.910000e-85	326.0
128	TraesCS2A01G236700	chr4D	89.300	243	22	4	5534	5772	144439891	144440133	9.970000e-78	302.0
129	TraesCS2A01G236700	chr4D	87.764	237	24	5	5540	5772	196642924	196643159	7.810000e-69	272.0
130	TraesCS2A01G236700	chr4D	91.011	89	6	1	3789	3875	468362108	468362196	1.080000e-22	119.0
131	TraesCS2A01G236700	chr4D	89.888	89	7	1	3789	3875	326382609	326382521	5.010000e-21	113.0
132	TraesCS2A01G236700	chr4D	88.421	95	9	1	3788	3880	368008696	368008602	5.010000e-21	113.0
133	TraesCS2A01G236700	chr6A	85.449	323	37	8	5130	5449	365039669	365039984	1.640000e-85	327.0
134	TraesCS2A01G236700	chr6A	89.474	95	7	2	3788	3880	27786226	27786319	3.870000e-22	117.0
135	TraesCS2A01G236700	chr6A	88.776	98	8	2	3786	3880	383964656	383964753	3.870000e-22	117.0
136	TraesCS2A01G236700	chr1D	93.607	219	10	1	922	1140	304630904	304630690	2.130000e-84	324.0
137	TraesCS2A01G236700	chr1D	78.194	454	52	20	5274	5721	484180005	484180417	4.740000e-61	246.0
138	TraesCS2A01G236700	chr1D	86.538	104	12	1	3779	3880	461882565	461882668	5.010000e-21	113.0
139	TraesCS2A01G236700	chr1D	89.773	88	7	1	3788	3873	118824272	118824185	1.800000e-20	111.0
140	TraesCS2A01G236700	chr1D	87.500	96	9	2	3788	3880	184474861	184474766	2.330000e-19	108.0
141	TraesCS2A01G236700	chr1D	87.368	95	10	2	3788	3880	211631596	211631502	2.330000e-19	108.0
142	TraesCS2A01G236700	chr1D	87.500	96	9	2	3788	3880	423732430	423732335	2.330000e-19	108.0
143	TraesCS2A01G236700	chr1D	84.259	108	13	4	3777	3880	365716902	365717009	1.080000e-17	102.0
144	TraesCS2A01G236700	chr6B	86.547	223	22	3	3993	4215	81863745	81863959	7.930000e-59	239.0
145	TraesCS2A01G236700	chr6B	84.375	128	17	1	5007	5131	176183367	176183240	8.330000e-24	122.0
146	TraesCS2A01G236700	chr6B	84.375	128	17	1	5007	5131	176220672	176220545	8.330000e-24	122.0
147	TraesCS2A01G236700	chr6B	88.119	101	10	1	3782	3880	489430856	489430756	1.080000e-22	119.0
148	TraesCS2A01G236700	chr6B	89.362	94	8	1	3789	3880	135488369	135488276	3.870000e-22	117.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G236700	chr2A	305383805	305389922	6117	False	11298.000000	11298	100.000000	1	6118	1	chr2A.!!$F4	6117
1	TraesCS2A01G236700	chr2A	236853160	236853751	591	True	977.000000	977	96.453000	331	922	1	chr2A.!!$R1	591
2	TraesCS2A01G236700	chr2A	344560093	344560681	588	False	939.000000	939	95.424000	332	921	1	chr2A.!!$F5	589
3	TraesCS2A01G236700	chr2A	467582107	467582693	586	True	922.000000	922	94.924000	331	921	1	chr2A.!!$R2	590
4	TraesCS2A01G236700	chr2A	344568566	344569158	592	False	913.000000	913	94.435000	331	923	1	chr2A.!!$F6	592
5	TraesCS2A01G236700	chr2A	168432530	168433296	766	False	905.000000	905	88.005000	4992	5774	1	chr2A.!!$F1	782
6	TraesCS2A01G236700	chr5A	425250122	425254033	3911	False	6440.000000	6440	96.429000	922	4823	1	chr5A.!!$F4	3901
7	TraesCS2A01G236700	chr5A	228899347	228900039	692	False	852.000000	852	88.858000	4982	5691	1	chr5A.!!$F2	709
8	TraesCS2A01G236700	chr5A	178777991	178779177	1186	False	539.000000	691	88.984500	3991	4861	2	chr5A.!!$F5	870
9	TraesCS2A01G236700	chr5A	18056840	18057630	790	True	206.900000	331	94.683000	1739	4995	3	chr5A.!!$R3	3256
10	TraesCS2A01G236700	chr1B	156695758	156696552	794	True	1009.000000	1009	89.814000	4985	5774	1	chr1B.!!$R1	789
11	TraesCS2A01G236700	chr1B	192766058	192766846	788	True	915.000000	915	87.826000	4985	5774	1	chr1B.!!$R2	789
12	TraesCS2A01G236700	chr1B	369977290	369978082	792	True	907.000000	907	87.593000	4985	5774	1	chr1B.!!$R3	789
13	TraesCS2A01G236700	chr1B	375887525	375889008	1483	True	885.500000	1661	86.710000	4375	6112	2	chr1B.!!$R8	1737
14	TraesCS2A01G236700	chr1B	375901203	375901848	645	True	837.000000	837	90.093000	1341	1985	1	chr1B.!!$R4	644
15	TraesCS2A01G236700	chr1B	197789297	197789920	623	False	568.000000	568	83.438000	5130	5750	1	chr1B.!!$F1	620
16	TraesCS2A01G236700	chr1B	615489376	615490355	979	False	519.500000	833	91.901500	1349	4995	2	chr1B.!!$F3	3646
17	TraesCS2A01G236700	chr1B	134541918	134542570	652	False	322.000000	329	85.608000	5146	5750	2	chr1B.!!$F2	604
18	TraesCS2A01G236700	chr2B	749571320	749575691	4371	True	785.333333	1391	87.816333	1341	6112	3	chr2B.!!$R3	4771
19	TraesCS2A01G236700	chr2B	290677435	290677998	563	False	640.000000	640	87.170000	2021	2586	1	chr2B.!!$F1	565
20	TraesCS2A01G236700	chr2B	302984807	302985434	627	False	593.000000	593	84.119000	5130	5750	1	chr2B.!!$F2	620
21	TraesCS2A01G236700	chr2B	193135901	193136482	581	True	547.000000	547	84.060000	2021	2600	1	chr2B.!!$R1	579
22	TraesCS2A01G236700	chr4A	441576078	441576666	588	True	941.000000	941	95.431000	331	921	1	chr4A.!!$R3	590
23	TraesCS2A01G236700	chr1A	430063183	430063772	589	True	929.000000	929	95.093000	331	921	1	chr1A.!!$R2	590
24	TraesCS2A01G236700	chrUn	462622048	462622635	587	True	928.000000	928	95.093000	331	921	1	chrUn.!!$R6	590
25	TraesCS2A01G236700	chrUn	357054145	357055147	1002	True	533.500000	867	92.118000	1341	4995	2	chrUn.!!$R7	3654
26	TraesCS2A01G236700	chr7A	160002208	160002796	588	False	922.000000	922	94.915000	331	919	1	chr7A.!!$F1	588
27	TraesCS2A01G236700	chr7A	726239124	726240142	1018	True	524.500000	854	91.598000	1341	4995	2	chr7A.!!$R2	3654
28	TraesCS2A01G236700	chr7A	726288293	726289056	763	True	384.500000	569	93.137500	1599	4995	2	chr7A.!!$R3	3396
29	TraesCS2A01G236700	chr3A	166942919	166943509	590	True	913.000000	913	94.604000	332	921	1	chr3A.!!$R1	589
30	TraesCS2A01G236700	chr3A	216716217	216716755	538	True	658.000000	658	88.869000	4322	4860	1	chr3A.!!$R2	538
31	TraesCS2A01G236700	chr4B	179437811	179438701	890	False	541.500000	715	88.684500	4982	5774	2	chr4B.!!$F3	792
32	TraesCS2A01G236700	chr4B	54766506	54767127	621	True	278.500000	340	83.655000	2614	3364	2	chr4B.!!$R2	750
33	TraesCS2A01G236700	chr5B	68453387	68454580	1193	False	543.500000	695	89.186000	3991	4862	2	chr5B.!!$F5	871
34	TraesCS2A01G236700	chr3B	671436428	671437674	1246	True	538.000000	669	89.451000	3991	4862	2	chr3B.!!$R4	871
35	TraesCS2A01G236700	chr3B	582276348	582276969	621	True	284.000000	340	83.932500	2614	3364	2	chr3B.!!$R3	750
36	TraesCS2A01G236700	chr3B	327390082	327390703	621	True	281.000000	340	83.794000	2614	3364	2	chr3B.!!$R2	750
37	TraesCS2A01G236700	chr6D	248585939	248586566	627	False	632.000000	632	85.174000	5130	5750	1	chr6D.!!$F2	620
38	TraesCS2A01G236700	chr7B	499467194	499467816	622	False	569.000000	569	83.466000	5130	5746	1	chr7B.!!$F2	616
39	TraesCS2A01G236700	chr7B	258617008	258617632	624	True	281.000000	329	83.666500	2611	3364	2	chr7B.!!$R2	753
40	TraesCS2A01G236700	chr5D	33694156	33696158	2002	False	335.000000	525	85.951000	4322	4995	2	chr5D.!!$F4	673
41	TraesCS2A01G236700	chr5D	361582459	361584455	1996	True	335.000000	525	86.378000	4322	4995	2	chr5D.!!$R5	673
42	TraesCS2A01G236700	chr4D	280925564	280926139	575	False	427.000000	427	80.587000	5130	5729	1	chr4D.!!$F3	599
43	TraesCS2A01G236700	chr4D	269682045	269682633	588	True	383.000000	383	79.077000	5133	5774	1	chr4D.!!$R1	641
44	TraesCS2A01G236700	chr4D	343453140	343453676	536	True	326.000000	326	78.392000	5133	5721	1	chr4D.!!$R3	588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
39	40	0.032540	CCAAGGCCACTTTGCAAGTC	59.967	55.000	5.01	40.46	3.01	F
105	106	0.035056	AGAAATGGCCACCGGAGAAG	60.035	55.000	8.16	0.00	2.85	F
106	107	0.035439	GAAATGGCCACCGGAGAAGA	60.035	55.000	8.16	0.00	2.87	F
246	247	0.178533	ACACGGAGACAAAAACCCGA	59.821	50.000	6.66	44.29	5.14	F
252	253	0.180878	AGACAAAAACCCGAACCCGA	59.819	50.000	0.00	38.22	5.14	F
254	255	0.180878	ACAAAAACCCGAACCCGAGA	59.819	50.000	0.00	38.22	4.04	F
541	546	0.307760	CAAGTCGCACAAGGTGAACC	59.692	55.000	0.00	37.86	3.62	F
2072	2349	0.467290	TGGGGACTGAAACAAGTGGC	60.467	55.000	0.00	0.00	5.01	F
3020	3315	0.238553	GAGAAGAAAACCGCTGCACC	59.761	55.000	0.00	0.00	5.01	F
3228	3523	1.004044	CAGGCTCAAGTGACCAGGAAT	59.996	52.381	0.00	0.00	3.01	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1096	1103	1.153168	CCCCTAACCGCTGACCATG	60.153	63.158	0.00	0.00	3.66	R
1234	1245	1.159285	CGCCATCTCTCTTTGCACAA	58.841	50.000	0.00	0.00	3.33	R
1236	1247	1.986575	GCCGCCATCTCTCTTTGCAC	61.987	60.000	0.00	0.00	4.57	R
2239	2516	1.449601	GGAGCCGAGCGATGGAAAA	60.450	57.895	0.00	0.00	2.29	R
2295	2572	9.423061	GCCTTAATTTTCTGAATACAAACACAT	57.577	29.630	0.00	0.00	3.21	R
2414	2691	9.620660	TTAAAAGATTTTTAGCGATGGAGTTTC	57.379	29.630	0.00	0.00	2.78	R
2609	2902	0.034380	ACCTGTCGAGCAGCCTACTA	60.034	55.000	8.85	43.71	1.82	R
3053	3348	0.106708	TGAAAGAAGCTGCACCTCGT	59.893	50.000	1.02	0.00	4.18	R
4759	5447	0.965439	CCCCGCCAAAATCAAGAACA	59.035	50.000	0.00	0.00	3.18	R
5388	8583	1.047002	TTGGACAAACAATGCCCAGG	58.953	50.000	0.00	43.03	4.45	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	3.156511	GGCGGTCTACCTGTAGTAAAC	57.843	52.381	4.36	0.00	34.84	2.01
21	22	2.159184	GGCGGTCTACCTGTAGTAAACC	60.159	54.545	4.36	4.39	34.84	3.27
22	23	2.493278	GCGGTCTACCTGTAGTAAACCA	59.507	50.000	11.84	0.00	34.84	3.67
23	24	3.056607	GCGGTCTACCTGTAGTAAACCAA	60.057	47.826	11.84	0.00	34.84	3.67
24	25	4.741342	CGGTCTACCTGTAGTAAACCAAG	58.259	47.826	11.84	0.00	34.84	3.61
25	26	4.381292	CGGTCTACCTGTAGTAAACCAAGG	60.381	50.000	11.84	0.00	34.84	3.61
26	27	4.502016	GTCTACCTGTAGTAAACCAAGGC	58.498	47.826	4.36	0.00	34.84	4.35
27	28	2.873094	ACCTGTAGTAAACCAAGGCC	57.127	50.000	0.00	0.00	0.00	5.19
28	29	2.059490	ACCTGTAGTAAACCAAGGCCA	58.941	47.619	5.01	0.00	0.00	5.36
29	30	2.224695	ACCTGTAGTAAACCAAGGCCAC	60.225	50.000	5.01	0.00	0.00	5.01
30	31	2.039879	CCTGTAGTAAACCAAGGCCACT	59.960	50.000	5.01	0.00	0.00	4.00
31	32	3.497942	CCTGTAGTAAACCAAGGCCACTT	60.498	47.826	5.01	0.00	37.43	3.16
32	33	4.142038	CTGTAGTAAACCAAGGCCACTTT	58.858	43.478	5.01	0.00	33.81	2.66
33	34	3.886505	TGTAGTAAACCAAGGCCACTTTG	59.113	43.478	5.01	0.00	33.81	2.77
35	36	1.410882	GTAAACCAAGGCCACTTTGCA	59.589	47.619	5.01	0.00	33.81	4.08
36	37	0.908198	AAACCAAGGCCACTTTGCAA	59.092	45.000	5.01	0.00	33.81	4.08
39	40	0.032540	CCAAGGCCACTTTGCAAGTC	59.967	55.000	5.01	0.00	40.46	3.01
41	42	1.000938	CAAGGCCACTTTGCAAGTCTC	60.001	52.381	5.01	0.00	40.46	3.36
42	43	0.886490	AGGCCACTTTGCAAGTCTCG	60.886	55.000	5.01	0.00	40.46	4.04
43	44	1.576421	GCCACTTTGCAAGTCTCGG	59.424	57.895	0.00	0.00	40.46	4.63
45	46	0.868406	CCACTTTGCAAGTCTCGGTC	59.132	55.000	0.00	0.00	40.46	4.79
46	47	0.868406	CACTTTGCAAGTCTCGGTCC	59.132	55.000	0.00	0.00	40.46	4.46
47	48	0.468226	ACTTTGCAAGTCTCGGTCCA	59.532	50.000	0.00	0.00	37.02	4.02
48	49	1.134220	ACTTTGCAAGTCTCGGTCCAA	60.134	47.619	0.00	0.00	37.02	3.53
49	50	2.154462	CTTTGCAAGTCTCGGTCCAAT	58.846	47.619	0.00	0.00	0.00	3.16
50	51	1.808411	TTGCAAGTCTCGGTCCAATC	58.192	50.000	0.00	0.00	0.00	2.67
51	52	0.036388	TGCAAGTCTCGGTCCAATCC	60.036	55.000	0.00	0.00	0.00	3.01
66	67	5.845391	TCCAATCCGGAAATGTTTAATCC	57.155	39.130	9.01	0.00	42.52	3.01
67	68	4.647399	TCCAATCCGGAAATGTTTAATCCC	59.353	41.667	9.01	0.00	42.52	3.85
68	69	4.202212	CCAATCCGGAAATGTTTAATCCCC	60.202	45.833	9.01	0.00	36.56	4.81
70	71	3.358118	TCCGGAAATGTTTAATCCCCAC	58.642	45.455	0.00	0.00	0.00	4.61
71	72	3.093057	CCGGAAATGTTTAATCCCCACA	58.907	45.455	0.00	0.00	0.00	4.17
72	73	3.119280	CCGGAAATGTTTAATCCCCACAC	60.119	47.826	0.00	0.00	0.00	3.82
73	74	3.508012	CGGAAATGTTTAATCCCCACACA	59.492	43.478	0.00	0.00	0.00	3.72
74	75	4.617298	CGGAAATGTTTAATCCCCACACAC	60.617	45.833	0.00	0.00	0.00	3.82
75	76	4.481463	GAAATGTTTAATCCCCACACACG	58.519	43.478	0.00	0.00	0.00	4.49
76	77	2.932855	TGTTTAATCCCCACACACGA	57.067	45.000	0.00	0.00	0.00	4.35
77	78	3.210232	TGTTTAATCCCCACACACGAA	57.790	42.857	0.00	0.00	0.00	3.85
78	79	3.552875	TGTTTAATCCCCACACACGAAA	58.447	40.909	0.00	0.00	0.00	3.46
80	81	3.773418	TTAATCCCCACACACGAAAGA	57.227	42.857	0.00	0.00	0.00	2.52
81	82	2.649531	AATCCCCACACACGAAAGAA	57.350	45.000	0.00	0.00	0.00	2.52
82	83	2.649531	ATCCCCACACACGAAAGAAA	57.350	45.000	0.00	0.00	0.00	2.52
84	85	0.310854	CCCCACACACGAAAGAAAGC	59.689	55.000	0.00	0.00	0.00	3.51
86	87	2.489971	CCCACACACGAAAGAAAGCTA	58.510	47.619	0.00	0.00	0.00	3.32
87	88	2.480419	CCCACACACGAAAGAAAGCTAG	59.520	50.000	0.00	0.00	0.00	3.42
88	89	3.390135	CCACACACGAAAGAAAGCTAGA	58.610	45.455	0.00	0.00	0.00	2.43
89	90	3.807622	CCACACACGAAAGAAAGCTAGAA	59.192	43.478	0.00	0.00	0.00	2.10
91	92	5.049405	CCACACACGAAAGAAAGCTAGAAAT	60.049	40.000	0.00	0.00	0.00	2.17
92	93	5.848036	CACACACGAAAGAAAGCTAGAAATG	59.152	40.000	0.00	0.00	0.00	2.32
93	94	5.049405	ACACACGAAAGAAAGCTAGAAATGG	60.049	40.000	0.00	0.00	0.00	3.16
95	96	3.440522	ACGAAAGAAAGCTAGAAATGGCC	59.559	43.478	0.00	0.00	0.00	5.36
96	97	3.440173	CGAAAGAAAGCTAGAAATGGCCA	59.560	43.478	8.56	8.56	0.00	5.36
97	98	4.672801	CGAAAGAAAGCTAGAAATGGCCAC	60.673	45.833	8.16	0.00	0.00	5.01
98	99	2.728007	AGAAAGCTAGAAATGGCCACC	58.272	47.619	8.16	0.00	0.00	4.61
101	102	1.223487	GCTAGAAATGGCCACCGGA	59.777	57.895	8.16	0.00	0.00	5.14
103	104	0.830648	CTAGAAATGGCCACCGGAGA	59.169	55.000	8.16	0.00	0.00	3.71
105	106	0.035056	AGAAATGGCCACCGGAGAAG	60.035	55.000	8.16	0.00	0.00	2.85
106	107	0.035439	GAAATGGCCACCGGAGAAGA	60.035	55.000	8.16	0.00	0.00	2.87
108	109	0.322546	AATGGCCACCGGAGAAGAAC	60.323	55.000	8.16	0.00	0.00	3.01
111	112	1.005394	GCCACCGGAGAAGAACGAA	60.005	57.895	9.46	0.00	0.00	3.85
112	113	1.014564	GCCACCGGAGAAGAACGAAG	61.015	60.000	9.46	0.00	0.00	3.79
113	114	1.014564	CCACCGGAGAAGAACGAAGC	61.015	60.000	9.46	0.00	0.00	3.86
114	115	1.080705	ACCGGAGAAGAACGAAGCG	60.081	57.895	9.46	0.00	0.00	4.68
115	116	2.445438	CCGGAGAAGAACGAAGCGC	61.445	63.158	0.00	0.00	0.00	5.92
117	118	2.445438	GGAGAAGAACGAAGCGCCG	61.445	63.158	2.29	3.59	0.00	6.46
118	119	2.432628	AGAAGAACGAAGCGCCGG	60.433	61.111	2.29	0.00	0.00	6.13
119	120	2.431942	GAAGAACGAAGCGCCGGA	60.432	61.111	5.05	0.00	0.00	5.14
122	123	1.635663	AAGAACGAAGCGCCGGAATG	61.636	55.000	5.05	0.00	0.00	2.67
123	124	3.718480	GAACGAAGCGCCGGAATGC	62.718	63.158	5.05	5.46	0.00	3.56
125	126	3.798650	CGAAGCGCCGGAATGCAA	61.799	61.111	5.05	0.00	0.00	4.08
126	127	2.566010	GAAGCGCCGGAATGCAAA	59.434	55.556	5.05	0.00	0.00	3.68
127	128	1.080839	GAAGCGCCGGAATGCAAAA	60.081	52.632	5.05	0.00	0.00	2.44
129	130	3.171911	GCGCCGGAATGCAAAACG	61.172	61.111	5.05	0.00	0.00	3.60
134	135	3.855630	CGGAATGCAAAACGGACAA	57.144	47.368	0.00	0.00	0.00	3.18
135	136	1.404477	CGGAATGCAAAACGGACAAC	58.596	50.000	0.00	0.00	0.00	3.32
146	147	3.101019	CGGACAACGGGAAAAATGC	57.899	52.632	0.00	0.00	39.42	3.56
147	148	0.596082	CGGACAACGGGAAAAATGCT	59.404	50.000	0.00	0.00	39.42	3.79
149	150	1.401018	GGACAACGGGAAAAATGCTCG	60.401	52.381	0.00	0.00	34.86	5.03
151	152	1.950909	ACAACGGGAAAAATGCTCGAA	59.049	42.857	0.00	0.00	32.56	3.71
153	154	3.754323	ACAACGGGAAAAATGCTCGAATA	59.246	39.130	0.00	0.00	32.56	1.75
154	155	4.095610	CAACGGGAAAAATGCTCGAATAC	58.904	43.478	0.00	0.00	32.56	1.89
155	156	3.340034	ACGGGAAAAATGCTCGAATACA	58.660	40.909	0.00	0.00	32.56	2.29
157	158	4.142687	ACGGGAAAAATGCTCGAATACAAG	60.143	41.667	0.00	0.00	32.56	3.16
158	159	4.094294	CGGGAAAAATGCTCGAATACAAGA	59.906	41.667	0.00	0.00	0.00	3.02
159	160	5.573146	GGGAAAAATGCTCGAATACAAGAG	58.427	41.667	0.00	0.00	37.54	2.85
160	161	5.354234	GGGAAAAATGCTCGAATACAAGAGA	59.646	40.000	0.00	0.00	36.65	3.10
161	162	6.251549	GGAAAAATGCTCGAATACAAGAGAC	58.748	40.000	0.00	0.00	36.65	3.36
164	165	3.842732	TGCTCGAATACAAGAGACGAA	57.157	42.857	0.00	0.00	36.65	3.85
166	167	3.057806	TGCTCGAATACAAGAGACGAACA	60.058	43.478	0.00	0.00	36.65	3.18
167	168	3.301116	GCTCGAATACAAGAGACGAACAC	59.699	47.826	0.00	0.00	36.65	3.32
168	169	3.485633	TCGAATACAAGAGACGAACACG	58.514	45.455	0.00	0.00	0.00	4.49
169	170	3.058708	TCGAATACAAGAGACGAACACGT	60.059	43.478	0.00	0.00	43.06	4.49
170	171	4.152223	TCGAATACAAGAGACGAACACGTA	59.848	41.667	0.00	0.00	40.41	3.57
172	173	5.053221	CGAATACAAGAGACGAACACGTATG	60.053	44.000	0.00	0.00	40.41	2.39
174	175	4.754372	ACAAGAGACGAACACGTATGTA	57.246	40.909	0.00	0.00	38.45	2.29
175	176	5.112220	ACAAGAGACGAACACGTATGTAA	57.888	39.130	0.00	0.00	38.45	2.41
176	177	5.522456	ACAAGAGACGAACACGTATGTAAA	58.478	37.500	0.00	0.00	38.45	2.01
177	178	6.154445	ACAAGAGACGAACACGTATGTAAAT	58.846	36.000	0.00	0.00	38.45	1.40
178	179	6.089016	ACAAGAGACGAACACGTATGTAAATG	59.911	38.462	0.00	0.00	38.45	2.32
180	181	4.239304	AGACGAACACGTATGTAAATGCA	58.761	39.130	0.00	0.00	38.45	3.96
182	183	5.350365	AGACGAACACGTATGTAAATGCAAT	59.650	36.000	0.00	0.00	38.45	3.56
183	184	5.320723	ACGAACACGTATGTAAATGCAATG	58.679	37.500	0.00	0.00	38.45	2.82
184	185	4.202158	CGAACACGTATGTAAATGCAATGC	59.798	41.667	0.00	0.00	38.45	3.56
185	186	4.693538	ACACGTATGTAAATGCAATGCA	57.306	36.364	11.44	11.44	39.40	3.96
192	193	6.129300	CGTATGTAAATGCAATGCACATGATG	60.129	38.462	11.23	0.74	43.04	3.07
193	194	5.326200	TGTAAATGCAATGCACATGATGA	57.674	34.783	11.23	0.00	43.04	2.92
194	195	5.103687	TGTAAATGCAATGCACATGATGAC	58.896	37.500	11.23	2.82	43.04	3.06
195	196	3.878160	AATGCAATGCACATGATGACA	57.122	38.095	11.23	0.00	43.04	3.58
196	197	4.400529	AATGCAATGCACATGATGACAT	57.599	36.364	11.23	0.00	43.04	3.06
211	212	6.985188	TGATGACATGATATGAGATGCATG	57.015	37.500	2.46	0.00	42.75	4.06
212	213	6.707290	TGATGACATGATATGAGATGCATGA	58.293	36.000	2.46	0.00	40.29	3.07
214	215	5.860611	TGACATGATATGAGATGCATGACA	58.139	37.500	2.46	4.19	40.29	3.58
215	216	6.292923	TGACATGATATGAGATGCATGACAA	58.707	36.000	2.46	0.00	39.26	3.18
216	217	6.940298	TGACATGATATGAGATGCATGACAAT	59.060	34.615	2.46	1.21	39.26	2.71
217	218	7.094805	TGACATGATATGAGATGCATGACAATG	60.095	37.037	2.46	7.16	39.26	2.82
218	219	6.940298	ACATGATATGAGATGCATGACAATGA	59.060	34.615	2.46	0.00	40.29	2.57
219	220	6.796705	TGATATGAGATGCATGACAATGAC	57.203	37.500	2.46	0.00	37.87	3.06
220	221	6.292923	TGATATGAGATGCATGACAATGACA	58.707	36.000	2.46	1.88	37.87	3.58
221	222	6.768861	TGATATGAGATGCATGACAATGACAA	59.231	34.615	2.46	0.00	37.87	3.18
222	223	5.907866	ATGAGATGCATGACAATGACAAA	57.092	34.783	2.46	0.00	35.42	2.83
226	227	7.252708	TGAGATGCATGACAATGACAAATAAC	58.747	34.615	2.46	0.00	35.67	1.89
228	229	7.031372	AGATGCATGACAATGACAAATAACAC	58.969	34.615	2.46	0.00	35.67	3.32
230	231	5.919707	TGCATGACAATGACAAATAACACAC	59.080	36.000	0.00	0.00	35.67	3.82
231	232	5.059587	GCATGACAATGACAAATAACACACG	59.940	40.000	0.00	0.00	35.67	4.49
234	235	5.049749	TGACAATGACAAATAACACACGGAG	60.050	40.000	0.00	0.00	0.00	4.63
235	236	5.060506	ACAATGACAAATAACACACGGAGA	58.939	37.500	0.00	0.00	0.00	3.71
236	237	5.049680	ACAATGACAAATAACACACGGAGAC	60.050	40.000	0.00	0.00	0.00	3.36
237	238	4.061357	TGACAAATAACACACGGAGACA	57.939	40.909	0.00	0.00	0.00	3.41
240	241	5.354513	TGACAAATAACACACGGAGACAAAA	59.645	36.000	0.00	0.00	0.00	2.44
241	242	6.127980	TGACAAATAACACACGGAGACAAAAA	60.128	34.615	0.00	0.00	0.00	1.94
242	243	6.031471	ACAAATAACACACGGAGACAAAAAC	58.969	36.000	0.00	0.00	0.00	2.43
243	244	4.823790	ATAACACACGGAGACAAAAACC	57.176	40.909	0.00	0.00	0.00	3.27
244	245	1.385528	ACACACGGAGACAAAAACCC	58.614	50.000	0.00	0.00	0.00	4.11
245	246	0.306533	CACACGGAGACAAAAACCCG	59.693	55.000	0.00	0.00	46.65	5.28
246	247	0.178533	ACACGGAGACAAAAACCCGA	59.821	50.000	6.66	0.00	44.29	5.14
247	248	1.301423	CACGGAGACAAAAACCCGAA	58.699	50.000	6.66	0.00	44.29	4.30
248	249	1.003223	CACGGAGACAAAAACCCGAAC	60.003	52.381	6.66	0.00	44.29	3.95
249	250	0.589708	CGGAGACAAAAACCCGAACC	59.410	55.000	0.00	0.00	44.29	3.62
250	251	0.956633	GGAGACAAAAACCCGAACCC	59.043	55.000	0.00	0.00	0.00	4.11
251	252	0.589708	GAGACAAAAACCCGAACCCG	59.410	55.000	0.00	0.00	0.00	5.28
252	253	0.180878	AGACAAAAACCCGAACCCGA	59.819	50.000	0.00	0.00	38.22	5.14
253	254	0.589708	GACAAAAACCCGAACCCGAG	59.410	55.000	0.00	0.00	38.22	4.63
254	255	0.180878	ACAAAAACCCGAACCCGAGA	59.819	50.000	0.00	0.00	38.22	4.04
256	257	2.038820	ACAAAAACCCGAACCCGAGATA	59.961	45.455	0.00	0.00	38.22	1.98
258	259	3.639672	AAAACCCGAACCCGAGATAAT	57.360	42.857	0.00	0.00	38.22	1.28
259	260	4.758773	AAAACCCGAACCCGAGATAATA	57.241	40.909	0.00	0.00	38.22	0.98
260	261	4.758773	AAACCCGAACCCGAGATAATAA	57.241	40.909	0.00	0.00	38.22	1.40
261	262	4.758773	AACCCGAACCCGAGATAATAAA	57.241	40.909	0.00	0.00	38.22	1.40
263	264	6.423776	AACCCGAACCCGAGATAATAAATA	57.576	37.500	0.00	0.00	38.22	1.40
266	267	8.137745	ACCCGAACCCGAGATAATAAATATAA	57.862	34.615	0.00	0.00	38.22	0.98
267	268	8.037166	ACCCGAACCCGAGATAATAAATATAAC	58.963	37.037	0.00	0.00	38.22	1.89
268	269	8.255905	CCCGAACCCGAGATAATAAATATAACT	58.744	37.037	0.00	0.00	38.22	2.24
269	270	9.649167	CCGAACCCGAGATAATAAATATAACTT	57.351	33.333	0.00	0.00	38.22	2.66
294	295	3.015516	GGAAACGGCAAGAGTTGGA	57.984	52.632	0.00	0.00	31.43	3.53
295	296	1.314730	GGAAACGGCAAGAGTTGGAA	58.685	50.000	0.00	0.00	31.43	3.53
296	297	1.886542	GGAAACGGCAAGAGTTGGAAT	59.113	47.619	0.00	0.00	31.43	3.01
298	299	3.119955	GGAAACGGCAAGAGTTGGAATAC	60.120	47.826	0.00	0.00	31.43	1.89
299	300	2.851263	ACGGCAAGAGTTGGAATACA	57.149	45.000	0.00	0.00	0.00	2.29
300	301	3.134574	ACGGCAAGAGTTGGAATACAA	57.865	42.857	0.00	0.00	36.54	2.41
302	303	4.079253	ACGGCAAGAGTTGGAATACAAAT	58.921	39.130	0.00	0.00	41.58	2.32
303	304	5.250200	ACGGCAAGAGTTGGAATACAAATA	58.750	37.500	0.00	0.00	41.58	1.40
304	305	5.354234	ACGGCAAGAGTTGGAATACAAATAG	59.646	40.000	0.00	0.00	41.58	1.73
305	306	5.220854	CGGCAAGAGTTGGAATACAAATAGG	60.221	44.000	0.00	0.00	41.58	2.57
306	307	5.067805	GGCAAGAGTTGGAATACAAATAGGG	59.932	44.000	0.00	0.00	41.58	3.53
308	309	6.377146	GCAAGAGTTGGAATACAAATAGGGAA	59.623	38.462	0.00	0.00	41.58	3.97
309	310	7.093945	GCAAGAGTTGGAATACAAATAGGGAAA	60.094	37.037	0.00	0.00	41.58	3.13
310	311	8.462016	CAAGAGTTGGAATACAAATAGGGAAAG	58.538	37.037	0.00	0.00	41.58	2.62
311	312	7.699878	AGAGTTGGAATACAAATAGGGAAAGT	58.300	34.615	0.00	0.00	41.58	2.66
312	313	8.170730	AGAGTTGGAATACAAATAGGGAAAGTT	58.829	33.333	0.00	0.00	41.58	2.66
313	314	9.457436	GAGTTGGAATACAAATAGGGAAAGTTA	57.543	33.333	0.00	0.00	41.58	2.24
314	315	9.239551	AGTTGGAATACAAATAGGGAAAGTTAC	57.760	33.333	0.00	0.00	41.58	2.50
315	316	9.016438	GTTGGAATACAAATAGGGAAAGTTACA	57.984	33.333	0.00	0.00	41.58	2.41
316	317	9.762381	TTGGAATACAAATAGGGAAAGTTACAT	57.238	29.630	0.00	0.00	35.79	2.29
317	318	9.403583	TGGAATACAAATAGGGAAAGTTACATC	57.596	33.333	0.00	0.00	0.00	3.06
318	319	8.847196	GGAATACAAATAGGGAAAGTTACATCC	58.153	37.037	0.00	0.00	34.85	3.51
319	320	8.446599	AATACAAATAGGGAAAGTTACATCCG	57.553	34.615	2.02	0.00	36.54	4.18
320	321	5.190677	ACAAATAGGGAAAGTTACATCCGG	58.809	41.667	0.00	0.00	36.54	5.14
321	322	4.432980	AATAGGGAAAGTTACATCCGGG	57.567	45.455	0.00	0.00	36.54	5.73
322	323	0.916809	AGGGAAAGTTACATCCGGGG	59.083	55.000	0.00	0.00	36.54	5.73
324	325	1.680860	GGGAAAGTTACATCCGGGGTG	60.681	57.143	5.55	5.55	36.54	4.61
327	328	3.307621	GGAAAGTTACATCCGGGGTGTTA	60.308	47.826	19.71	6.65	0.00	2.41
328	329	3.339253	AAGTTACATCCGGGGTGTTAC	57.661	47.619	19.71	19.44	31.30	2.50
329	330	2.259012	AGTTACATCCGGGGTGTTACA	58.741	47.619	26.16	4.90	33.02	2.41
337	338	2.652530	GGGTGTTACACGGCTCGA	59.347	61.111	9.52	0.00	34.83	4.04
526	531	4.015872	TCACGGGCTTCTAAAATCAAGT	57.984	40.909	0.00	0.00	0.00	3.16
541	546	0.307760	CAAGTCGCACAAGGTGAACC	59.692	55.000	0.00	0.00	37.86	3.62
967	974	1.078426	GTCGGTGGGGTTGGATCAG	60.078	63.158	0.00	0.00	0.00	2.90
985	992	2.197605	GCTAGGCCGGAGACCTCTC	61.198	68.421	5.05	0.00	42.14	3.20
1084	1091	1.541169	AACATGGGTTGGTGGAGCA	59.459	52.632	0.00	0.00	35.46	4.26
1229	1240	2.224257	GGAAGAGAGAGATGTGGATGGC	60.224	54.545	0.00	0.00	0.00	4.40
1234	1245	3.740128	GAGATGTGGATGGCGGCGT	62.740	63.158	9.37	2.02	0.00	5.68
1236	1247	3.112126	GATGTGGATGGCGGCGTTG	62.112	63.158	9.37	0.00	0.00	4.10
1279	1303	3.466836	CGCTGAGTAGAGAGAGATGACT	58.533	50.000	0.00	0.00	0.00	3.41
1280	1304	3.248363	CGCTGAGTAGAGAGAGATGACTG	59.752	52.174	0.00	0.00	0.00	3.51
1285	1309	0.682532	AGAGAGAGATGACTGCGGCA	60.683	55.000	1.29	1.29	0.00	5.69
1385	1409	5.339423	TCCCTTCCCTTTTTCTGAATCTT	57.661	39.130	0.00	0.00	0.00	2.40
1415	1439	5.971895	TTAATTTCCTCGGTTATGCGTAC	57.028	39.130	0.00	0.00	0.00	3.67
1698	1727	4.040339	TCAGTGAATGAGACAAGGCACTAA	59.960	41.667	0.00	0.00	35.09	2.24
1781	1811	3.689161	TCATAGATTGTTTTGTGCCGGAG	59.311	43.478	5.05	0.00	0.00	4.63
1925	1957	6.536224	TCTGTGCACACTATGTTTCATATGAG	59.464	38.462	17.42	0.00	0.00	2.90
2072	2349	0.467290	TGGGGACTGAAACAAGTGGC	60.467	55.000	0.00	0.00	0.00	5.01
2295	2572	7.830697	TGCCTCATTTCAATTCTCTTATCTTGA	59.169	33.333	0.00	0.00	0.00	3.02
2414	2691	6.828785	TGCTTTCTTAGGGCTATAAAAAGAGG	59.171	38.462	0.00	0.00	0.00	3.69
2711	3004	5.211973	TGATGGCCTATAGGAGATATGTCC	58.788	45.833	23.61	10.98	37.39	4.02
2756	3049	7.169982	CGGTTTCTTTGATTCCTACTATGCTAG	59.830	40.741	0.00	0.00	0.00	3.42
2814	3107	8.649973	ATTCTTTCTAACTGCCTTTCTATACG	57.350	34.615	0.00	0.00	0.00	3.06
2841	3134	1.142870	TGCACACCTACTTCCAAGCTT	59.857	47.619	0.00	0.00	0.00	3.74
2871	3164	0.250553	TCCTTGCAGTTACAACCCCG	60.251	55.000	0.00	0.00	0.00	5.73
2892	3185	4.058817	CGAGGTTTAGCTTCTGAAACAGT	58.941	43.478	11.02	0.00	37.30	3.55
2926	3221	9.655769	CATATGCTTAACTACTTAAATGCACTG	57.344	33.333	0.00	0.00	30.16	3.66
2949	3244	7.120579	ACTGATGTTTGTGTGTTCTTTTGTAGA	59.879	33.333	0.00	0.00	0.00	2.59
3001	3296	2.229543	TGTGCCTTATTTCAAGCTGCTG	59.770	45.455	1.35	0.00	0.00	4.41
3020	3315	0.238553	GAGAAGAAAACCGCTGCACC	59.761	55.000	0.00	0.00	0.00	5.01
3053	3348	2.082231	GCAGAAGCTTGATGCAGAAGA	58.918	47.619	22.32	0.00	45.94	2.87
3062	3357	3.137687	TGCAGAAGACGAGGTGCA	58.862	55.556	0.00	0.00	43.50	4.57
3136	3431	4.258543	TCTTCACTGGTTTTCTTTCACGT	58.741	39.130	0.00	0.00	0.00	4.49
3202	3497	6.012508	TCCTGTTGAAGAGAAGGATGGTAAAT	60.013	38.462	0.00	0.00	33.85	1.40
3228	3523	1.004044	CAGGCTCAAGTGACCAGGAAT	59.996	52.381	0.00	0.00	0.00	3.01
3377	3676	4.011698	GGCACTAAAGAAACCGGGATAAA	58.988	43.478	6.32	0.00	0.00	1.40
3468	3767	1.270907	AGACCATCCTTCTCGCTGTT	58.729	50.000	0.00	0.00	0.00	3.16
3566	3865	1.680735	TCCAACAACACTCCATTGCAC	59.319	47.619	0.00	0.00	0.00	4.57
3751	4050	4.455877	CAGTTAGGGTGGATTTGTGTCTTC	59.544	45.833	0.00	0.00	0.00	2.87
3784	4083	5.220529	GGCAACCTTACGTGTACATATTCAC	60.221	44.000	0.00	0.00	0.00	3.18
3791	4090	8.350722	CCTTACGTGTACATATTCACAGATACT	58.649	37.037	0.00	0.00	34.66	2.12
3933	4232	2.533942	CGTGTTTTTACAGCTTTGTGGC	59.466	45.455	0.00	0.00	0.00	5.01
4072	4372	2.435437	TGCTCTGTTCCATAGCATGCTA	59.565	45.455	28.72	28.72	38.36	3.49
4181	4481	2.867624	TGCATCTTTGTTCTGCTCCTT	58.132	42.857	0.00	0.00	36.84	3.36
4269	4569	4.560128	TCGTCCTCATGCTGCTTATATTC	58.440	43.478	0.00	0.00	0.00	1.75
4312	4612	6.096423	AGGATGCGTCTACTTATTTGAGTACA	59.904	38.462	5.77	0.00	0.00	2.90
4672	5360	5.565242	CGTGACACACTACATGGTTACCTTA	60.565	44.000	6.37	0.00	31.34	2.69
4804	5492	8.682936	ATATTCCTTCATTACTTGGTTAGCTG	57.317	34.615	0.00	0.00	0.00	4.24
4808	5496	5.705441	CCTTCATTACTTGGTTAGCTGTCAA	59.295	40.000	0.00	0.00	0.00	3.18
4809	5497	6.348540	CCTTCATTACTTGGTTAGCTGTCAAC	60.349	42.308	0.00	0.00	0.00	3.18
4810	5498	5.616270	TCATTACTTGGTTAGCTGTCAACA	58.384	37.500	0.00	0.00	0.00	3.33
4811	5499	5.468746	TCATTACTTGGTTAGCTGTCAACAC	59.531	40.000	0.00	0.00	0.00	3.32
4812	5500	3.560636	ACTTGGTTAGCTGTCAACACT	57.439	42.857	0.00	0.00	0.00	3.55
4813	5501	3.467803	ACTTGGTTAGCTGTCAACACTC	58.532	45.455	0.00	0.00	0.00	3.51
4814	5502	3.118408	ACTTGGTTAGCTGTCAACACTCA	60.118	43.478	0.00	0.00	0.00	3.41
4815	5503	2.833794	TGGTTAGCTGTCAACACTCAC	58.166	47.619	0.00	0.00	0.00	3.51
4816	5504	2.143925	GGTTAGCTGTCAACACTCACC	58.856	52.381	0.00	0.00	0.00	4.02
4817	5505	2.484770	GGTTAGCTGTCAACACTCACCA	60.485	50.000	0.00	0.00	0.00	4.17
4818	5506	3.202906	GTTAGCTGTCAACACTCACCAA	58.797	45.455	0.00	0.00	0.00	3.67
4819	5507	2.645838	AGCTGTCAACACTCACCAAT	57.354	45.000	0.00	0.00	0.00	3.16
4820	5508	2.936202	AGCTGTCAACACTCACCAATT	58.064	42.857	0.00	0.00	0.00	2.32
4821	5509	3.290710	AGCTGTCAACACTCACCAATTT	58.709	40.909	0.00	0.00	0.00	1.82
4822	5510	3.701040	AGCTGTCAACACTCACCAATTTT	59.299	39.130	0.00	0.00	0.00	1.82
4823	5511	4.160252	AGCTGTCAACACTCACCAATTTTT	59.840	37.500	0.00	0.00	0.00	1.94
4824	5512	4.268405	GCTGTCAACACTCACCAATTTTTG	59.732	41.667	0.00	0.00	0.00	2.44
4825	5513	5.649557	CTGTCAACACTCACCAATTTTTGA	58.350	37.500	0.00	0.00	0.00	2.69
4826	5514	6.030548	TGTCAACACTCACCAATTTTTGAA	57.969	33.333	0.00	0.00	0.00	2.69
4827	5515	6.638610	TGTCAACACTCACCAATTTTTGAAT	58.361	32.000	0.00	0.00	0.00	2.57
4828	5516	7.776107	TGTCAACACTCACCAATTTTTGAATA	58.224	30.769	0.00	0.00	0.00	1.75
4829	5517	8.420222	TGTCAACACTCACCAATTTTTGAATAT	58.580	29.630	0.00	0.00	0.00	1.28
4830	5518	8.915654	GTCAACACTCACCAATTTTTGAATATC	58.084	33.333	0.00	0.00	0.00	1.63
4831	5519	8.859090	TCAACACTCACCAATTTTTGAATATCT	58.141	29.630	0.00	0.00	0.00	1.98
4832	5520	9.480053	CAACACTCACCAATTTTTGAATATCTT	57.520	29.630	0.00	0.00	0.00	2.40
4833	5521	9.696917	AACACTCACCAATTTTTGAATATCTTC	57.303	29.630	0.00	0.00	0.00	2.87
4834	5522	8.306761	ACACTCACCAATTTTTGAATATCTTCC	58.693	33.333	0.00	0.00	0.00	3.46
4835	5523	8.306038	CACTCACCAATTTTTGAATATCTTCCA	58.694	33.333	0.00	0.00	0.00	3.53
4836	5524	9.039165	ACTCACCAATTTTTGAATATCTTCCAT	57.961	29.630	0.00	0.00	0.00	3.41
4837	5525	9.880157	CTCACCAATTTTTGAATATCTTCCATT	57.120	29.630	0.00	0.00	0.00	3.16
4838	5526	9.656040	TCACCAATTTTTGAATATCTTCCATTG	57.344	29.630	0.00	0.00	0.00	2.82
4839	5527	8.392612	CACCAATTTTTGAATATCTTCCATTGC	58.607	33.333	0.00	0.00	0.00	3.56
4840	5528	8.323567	ACCAATTTTTGAATATCTTCCATTGCT	58.676	29.630	0.00	0.00	0.00	3.91
4841	5529	9.820725	CCAATTTTTGAATATCTTCCATTGCTA	57.179	29.630	0.00	0.00	0.00	3.49
4854	5542	9.860898	ATCTTCCATTGCTAAATTTAGTTCAAC	57.139	29.630	22.94	9.30	33.32	3.18
4855	5543	8.855110	TCTTCCATTGCTAAATTTAGTTCAACA	58.145	29.630	22.94	11.48	33.32	3.33
4856	5544	9.643693	CTTCCATTGCTAAATTTAGTTCAACAT	57.356	29.630	22.94	6.51	33.32	2.71
4857	5545	9.995003	TTCCATTGCTAAATTTAGTTCAACATT	57.005	25.926	22.94	8.54	33.32	2.71
4858	5546	9.995003	TCCATTGCTAAATTTAGTTCAACATTT	57.005	25.926	22.94	5.65	33.32	2.32
4920	5608	7.872163	TTGCTTATTTGAGTGTGCTTTTATG	57.128	32.000	0.00	0.00	0.00	1.90
4925	5613	9.229784	CTTATTTGAGTGTGCTTTTATGCATAG	57.770	33.333	6.50	0.00	45.23	2.23
4984	8153	3.177228	AGGAGACAGCTCTATTGTTGGT	58.823	45.455	0.00	0.00	41.06	3.67
5084	8253	3.309954	GGCTGATCTCGGTTTTGTACATC	59.690	47.826	0.00	0.00	0.00	3.06
5131	8300	9.319143	CTACTTCCCATAAGAGAGTGTATTTTG	57.681	37.037	0.00	0.00	0.00	2.44
5137	8306	7.047891	CCATAAGAGAGTGTATTTTGGTGCTA	58.952	38.462	0.00	0.00	0.00	3.49
5152	8321	6.985188	TTGGTGCTACAGATTGTTTCTATC	57.015	37.500	0.00	0.00	31.77	2.08
5285	8465	2.774234	TGGTTTGCCCTTCCATTTCAAA	59.226	40.909	0.00	0.00	0.00	2.69
5292	8473	3.346315	CCCTTCCATTTCAAATTTGCCC	58.654	45.455	13.54	0.00	0.00	5.36
5294	8475	4.507157	CCCTTCCATTTCAAATTTGCCCTT	60.507	41.667	13.54	0.00	0.00	3.95
5296	8477	4.284829	TCCATTTCAAATTTGCCCTTCC	57.715	40.909	13.54	0.00	0.00	3.46
5297	8478	3.649981	TCCATTTCAAATTTGCCCTTCCA	59.350	39.130	13.54	0.00	0.00	3.53
5298	8479	3.752747	CCATTTCAAATTTGCCCTTCCAC	59.247	43.478	13.54	0.00	0.00	4.02
5300	8481	3.749665	TTCAAATTTGCCCTTCCACTG	57.250	42.857	13.54	0.00	0.00	3.66
5313	8498	2.785540	TCCACTGCAGCAATATGTCA	57.214	45.000	15.27	0.00	0.00	3.58
5314	8499	3.070476	TCCACTGCAGCAATATGTCAA	57.930	42.857	15.27	0.00	0.00	3.18
5316	8501	3.628942	TCCACTGCAGCAATATGTCAATC	59.371	43.478	15.27	0.00	0.00	2.67
5318	8503	4.097437	CCACTGCAGCAATATGTCAATCTT	59.903	41.667	15.27	0.00	0.00	2.40
5319	8504	5.034797	CACTGCAGCAATATGTCAATCTTG	58.965	41.667	15.27	0.00	0.00	3.02
5320	8505	4.703575	ACTGCAGCAATATGTCAATCTTGT	59.296	37.500	15.27	0.00	0.00	3.16
5321	8506	4.989044	TGCAGCAATATGTCAATCTTGTG	58.011	39.130	0.00	0.00	0.00	3.33
5558	8893	6.786843	ATATAGGGGATGTGAAGGACAAAT	57.213	37.500	0.00	0.00	38.36	2.32
5604	8944	5.163374	GGGGAGAGTTACCAACAACGTATAT	60.163	44.000	0.00	0.00	33.50	0.86
5628	8969	2.762327	ACAAAGCATGACATGGATTCCC	59.238	45.455	17.03	0.00	0.00	3.97
5686	9027	1.270041	TGCCCGCATTTTGAAAACTCC	60.270	47.619	0.00	0.00	0.00	3.85
5755	9103	8.773033	AAGGATTCTATTATTGCCAATCTGTT	57.227	30.769	0.00	0.00	0.00	3.16
5758	9106	9.899226	GGATTCTATTATTGCCAATCTGTTAAC	57.101	33.333	0.00	0.00	0.00	2.01
5807	9155	6.966534	AATTAATCCCAGCAGTTAATCAGG	57.033	37.500	0.00	0.00	30.14	3.86
5808	9156	3.303351	AATCCCAGCAGTTAATCAGGG	57.697	47.619	0.00	0.00	37.65	4.45
5809	9157	1.965414	TCCCAGCAGTTAATCAGGGA	58.035	50.000	0.00	0.00	42.76	4.20
5810	9158	2.274542	TCCCAGCAGTTAATCAGGGAA	58.725	47.619	0.00	0.00	42.08	3.97
5811	9159	2.647299	TCCCAGCAGTTAATCAGGGAAA	59.353	45.455	0.00	0.00	42.08	3.13
5812	9160	3.269381	TCCCAGCAGTTAATCAGGGAAAT	59.731	43.478	0.00	0.00	42.08	2.17
5813	9161	3.633986	CCCAGCAGTTAATCAGGGAAATC	59.366	47.826	0.00	0.00	38.60	2.17
5814	9162	3.633986	CCAGCAGTTAATCAGGGAAATCC	59.366	47.826	0.00	0.00	0.00	3.01
5826	9174	3.186345	GAAATCCCCGTTTCCCCTC	57.814	57.895	0.00	0.00	33.10	4.30
5827	9175	0.330267	GAAATCCCCGTTTCCCCTCA	59.670	55.000	0.00	0.00	33.10	3.86
5828	9176	0.039180	AAATCCCCGTTTCCCCTCAC	59.961	55.000	0.00	0.00	0.00	3.51
5829	9177	1.859841	AATCCCCGTTTCCCCTCACC	61.860	60.000	0.00	0.00	0.00	4.02
5830	9178	2.782997	ATCCCCGTTTCCCCTCACCT	62.783	60.000	0.00	0.00	0.00	4.00
5831	9179	2.351276	CCCGTTTCCCCTCACCTG	59.649	66.667	0.00	0.00	0.00	4.00
5832	9180	2.359975	CCGTTTCCCCTCACCTGC	60.360	66.667	0.00	0.00	0.00	4.85
5833	9181	2.742372	CGTTTCCCCTCACCTGCG	60.742	66.667	0.00	0.00	0.00	5.18
5834	9182	2.359975	GTTTCCCCTCACCTGCGG	60.360	66.667	0.00	0.00	0.00	5.69
5835	9183	2.852075	TTTCCCCTCACCTGCGGT	60.852	61.111	0.00	0.00	35.62	5.68
5836	9184	2.457323	TTTCCCCTCACCTGCGGTT	61.457	57.895	0.00	0.00	31.02	4.44
5837	9185	2.690653	TTTCCCCTCACCTGCGGTTG	62.691	60.000	0.00	0.00	31.02	3.77
5848	9196	3.286751	GCGGTTGCAACTCCAGCA	61.287	61.111	27.64	0.00	42.15	4.41
5852	9200	4.674306	TTGCAACTCCAGCAACCA	57.326	50.000	0.00	0.00	46.13	3.67
5853	9201	2.417978	TTGCAACTCCAGCAACCAG	58.582	52.632	0.00	0.00	46.13	4.00
5854	9202	1.737355	TTGCAACTCCAGCAACCAGC	61.737	55.000	0.00	0.00	46.13	4.85
5863	9211	3.420943	GCAACCAGCGTGACAGTT	58.579	55.556	0.00	0.00	0.00	3.16
5864	9212	1.279840	GCAACCAGCGTGACAGTTC	59.720	57.895	0.00	0.00	0.00	3.01
5865	9213	1.436195	GCAACCAGCGTGACAGTTCA	61.436	55.000	0.00	0.00	0.00	3.18
5876	9224	3.194005	TGACAGTTCACAGTTCCTTCC	57.806	47.619	0.00	0.00	0.00	3.46
5877	9225	2.503765	TGACAGTTCACAGTTCCTTCCA	59.496	45.455	0.00	0.00	0.00	3.53
5878	9226	3.136443	TGACAGTTCACAGTTCCTTCCAT	59.864	43.478	0.00	0.00	0.00	3.41
5879	9227	3.744660	ACAGTTCACAGTTCCTTCCATC	58.255	45.455	0.00	0.00	0.00	3.51
5880	9228	3.077359	CAGTTCACAGTTCCTTCCATCC	58.923	50.000	0.00	0.00	0.00	3.51
5881	9229	2.040412	AGTTCACAGTTCCTTCCATCCC	59.960	50.000	0.00	0.00	0.00	3.85
5882	9230	2.040412	GTTCACAGTTCCTTCCATCCCT	59.960	50.000	0.00	0.00	0.00	4.20
5883	9231	3.199442	TCACAGTTCCTTCCATCCCTA	57.801	47.619	0.00	0.00	0.00	3.53
5884	9232	2.838202	TCACAGTTCCTTCCATCCCTAC	59.162	50.000	0.00	0.00	0.00	3.18
5885	9233	1.831736	ACAGTTCCTTCCATCCCTACG	59.168	52.381	0.00	0.00	0.00	3.51
5886	9234	0.831307	AGTTCCTTCCATCCCTACGC	59.169	55.000	0.00	0.00	0.00	4.42
5887	9235	0.539986	GTTCCTTCCATCCCTACGCA	59.460	55.000	0.00	0.00	0.00	5.24
5888	9236	1.141053	GTTCCTTCCATCCCTACGCAT	59.859	52.381	0.00	0.00	0.00	4.73
5889	9237	1.048601	TCCTTCCATCCCTACGCATC	58.951	55.000	0.00	0.00	0.00	3.91
5890	9238	1.051812	CCTTCCATCCCTACGCATCT	58.948	55.000	0.00	0.00	0.00	2.90
5891	9239	1.001406	CCTTCCATCCCTACGCATCTC	59.999	57.143	0.00	0.00	0.00	2.75
5892	9240	1.688735	CTTCCATCCCTACGCATCTCA	59.311	52.381	0.00	0.00	0.00	3.27
5893	9241	1.332195	TCCATCCCTACGCATCTCAG	58.668	55.000	0.00	0.00	0.00	3.35
5894	9242	0.319728	CCATCCCTACGCATCTCAGG	59.680	60.000	0.00	0.00	0.00	3.86
5895	9243	1.332195	CATCCCTACGCATCTCAGGA	58.668	55.000	0.00	0.00	0.00	3.86
5896	9244	1.271934	CATCCCTACGCATCTCAGGAG	59.728	57.143	0.00	0.00	0.00	3.69
5897	9245	0.468214	TCCCTACGCATCTCAGGAGG	60.468	60.000	0.00	0.00	0.00	4.30
5898	9246	1.365633	CCTACGCATCTCAGGAGGC	59.634	63.158	0.00	0.00	44.61	4.70
5903	9251	2.420890	CATCTCAGGAGGCGCCTC	59.579	66.667	42.46	42.46	46.97	4.70
5904	9252	2.132996	CATCTCAGGAGGCGCCTCT	61.133	63.158	45.55	32.18	46.97	3.69
5905	9253	1.382420	ATCTCAGGAGGCGCCTCTT	60.382	57.895	45.55	40.05	46.97	2.85
5906	9254	1.398958	ATCTCAGGAGGCGCCTCTTC	61.399	60.000	45.55	33.64	46.97	2.87
5907	9255	2.283894	TCAGGAGGCGCCTCTTCA	60.284	61.111	45.55	31.32	46.97	3.02
5908	9256	1.892819	CTCAGGAGGCGCCTCTTCAA	61.893	60.000	45.55	30.66	46.97	2.69
5909	9257	1.743252	CAGGAGGCGCCTCTTCAAC	60.743	63.158	45.55	32.31	46.97	3.18
5910	9258	2.436824	GGAGGCGCCTCTTCAACC	60.437	66.667	45.55	30.76	42.38	3.77
5911	9259	2.665603	GAGGCGCCTCTTCAACCT	59.334	61.111	42.50	14.43	39.80	3.50
5912	9260	1.003233	GAGGCGCCTCTTCAACCTT	60.003	57.895	42.50	13.59	39.80	3.50
5913	9261	1.301677	GAGGCGCCTCTTCAACCTTG	61.302	60.000	42.50	0.00	39.80	3.61
5914	9262	1.600916	GGCGCCTCTTCAACCTTGT	60.601	57.895	22.15	0.00	0.00	3.16
5915	9263	0.321298	GGCGCCTCTTCAACCTTGTA	60.321	55.000	22.15	0.00	0.00	2.41
5916	9264	1.679032	GGCGCCTCTTCAACCTTGTAT	60.679	52.381	22.15	0.00	0.00	2.29
5917	9265	2.419574	GGCGCCTCTTCAACCTTGTATA	60.420	50.000	22.15	0.00	0.00	1.47
5918	9266	3.467803	GCGCCTCTTCAACCTTGTATAT	58.532	45.455	0.00	0.00	0.00	0.86
5919	9267	4.502604	GGCGCCTCTTCAACCTTGTATATA	60.503	45.833	22.15	0.00	0.00	0.86
5920	9268	5.054477	GCGCCTCTTCAACCTTGTATATAA	58.946	41.667	0.00	0.00	0.00	0.98
5921	9269	5.701290	GCGCCTCTTCAACCTTGTATATAAT	59.299	40.000	0.00	0.00	0.00	1.28
5922	9270	6.128526	GCGCCTCTTCAACCTTGTATATAATC	60.129	42.308	0.00	0.00	0.00	1.75
5923	9271	7.155328	CGCCTCTTCAACCTTGTATATAATCT	58.845	38.462	0.00	0.00	0.00	2.40
5924	9272	7.116948	CGCCTCTTCAACCTTGTATATAATCTG	59.883	40.741	0.00	0.00	0.00	2.90
5925	9273	7.934120	GCCTCTTCAACCTTGTATATAATCTGT	59.066	37.037	0.00	0.00	0.00	3.41
5926	9274	9.265901	CCTCTTCAACCTTGTATATAATCTGTG	57.734	37.037	0.00	0.00	0.00	3.66
5945	9293	7.325660	TCTGTGAAAGATGATCAATAAAGGC	57.674	36.000	0.00	0.00	0.00	4.35
5946	9294	7.114754	TCTGTGAAAGATGATCAATAAAGGCT	58.885	34.615	0.00	0.00	0.00	4.58
5947	9295	8.267183	TCTGTGAAAGATGATCAATAAAGGCTA	58.733	33.333	0.00	0.00	0.00	3.93
5948	9296	8.213518	TGTGAAAGATGATCAATAAAGGCTAC	57.786	34.615	0.00	0.00	0.00	3.58
5949	9297	7.828717	TGTGAAAGATGATCAATAAAGGCTACA	59.171	33.333	0.00	0.00	0.00	2.74
5950	9298	8.125448	GTGAAAGATGATCAATAAAGGCTACAC	58.875	37.037	0.00	0.00	0.00	2.90
5951	9299	7.828717	TGAAAGATGATCAATAAAGGCTACACA	59.171	33.333	0.00	0.00	0.00	3.72
5952	9300	8.757982	AAAGATGATCAATAAAGGCTACACAT	57.242	30.769	0.00	0.00	0.00	3.21
5953	9301	7.741027	AGATGATCAATAAAGGCTACACATG	57.259	36.000	0.00	0.00	0.00	3.21
5954	9302	7.285566	AGATGATCAATAAAGGCTACACATGT	58.714	34.615	0.00	0.00	0.00	3.21
5955	9303	7.776969	AGATGATCAATAAAGGCTACACATGTT	59.223	33.333	0.00	0.00	0.00	2.71
5956	9304	7.320443	TGATCAATAAAGGCTACACATGTTC	57.680	36.000	0.00	0.00	0.00	3.18
5957	9305	6.883756	TGATCAATAAAGGCTACACATGTTCA	59.116	34.615	0.00	0.00	0.00	3.18
5958	9306	7.557358	TGATCAATAAAGGCTACACATGTTCAT	59.443	33.333	0.00	0.00	0.00	2.57
5959	9307	7.701539	TCAATAAAGGCTACACATGTTCATT	57.298	32.000	0.00	0.00	0.00	2.57
5960	9308	7.761409	TCAATAAAGGCTACACATGTTCATTC	58.239	34.615	0.00	0.00	0.00	2.67
5961	9309	7.611467	TCAATAAAGGCTACACATGTTCATTCT	59.389	33.333	0.00	0.00	0.00	2.40
5962	9310	8.892723	CAATAAAGGCTACACATGTTCATTCTA	58.107	33.333	0.00	0.00	0.00	2.10
5963	9311	9.632638	AATAAAGGCTACACATGTTCATTCTAT	57.367	29.630	0.00	0.00	0.00	1.98
5964	9312	7.944729	AAAGGCTACACATGTTCATTCTATT	57.055	32.000	0.00	0.00	0.00	1.73
5965	9313	7.944729	AAGGCTACACATGTTCATTCTATTT	57.055	32.000	0.00	0.00	0.00	1.40
5966	9314	7.325660	AGGCTACACATGTTCATTCTATTTG	57.674	36.000	0.00	0.00	0.00	2.32
5967	9315	6.886459	AGGCTACACATGTTCATTCTATTTGT	59.114	34.615	0.00	0.00	0.00	2.83
5968	9316	7.394359	AGGCTACACATGTTCATTCTATTTGTT	59.606	33.333	0.00	0.00	0.00	2.83
5969	9317	8.028938	GGCTACACATGTTCATTCTATTTGTTT	58.971	33.333	0.00	0.00	0.00	2.83
5970	9318	9.065871	GCTACACATGTTCATTCTATTTGTTTC	57.934	33.333	0.00	0.00	0.00	2.78
5973	9321	9.071276	ACACATGTTCATTCTATTTGTTTCTCT	57.929	29.630	0.00	0.00	0.00	3.10
5974	9322	9.552114	CACATGTTCATTCTATTTGTTTCTCTC	57.448	33.333	0.00	0.00	0.00	3.20
5975	9323	9.512588	ACATGTTCATTCTATTTGTTTCTCTCT	57.487	29.630	0.00	0.00	0.00	3.10
5976	9324	9.985318	CATGTTCATTCTATTTGTTTCTCTCTC	57.015	33.333	0.00	0.00	0.00	3.20
5977	9325	8.244494	TGTTCATTCTATTTGTTTCTCTCTCG	57.756	34.615	0.00	0.00	0.00	4.04
5978	9326	6.893958	TCATTCTATTTGTTTCTCTCTCGC	57.106	37.500	0.00	0.00	0.00	5.03
5979	9327	6.634805	TCATTCTATTTGTTTCTCTCTCGCT	58.365	36.000	0.00	0.00	0.00	4.93
5980	9328	7.099764	TCATTCTATTTGTTTCTCTCTCGCTT	58.900	34.615	0.00	0.00	0.00	4.68
5981	9329	6.712241	TTCTATTTGTTTCTCTCTCGCTTG	57.288	37.500	0.00	0.00	0.00	4.01
5982	9330	5.784177	TCTATTTGTTTCTCTCTCGCTTGT	58.216	37.500	0.00	0.00	0.00	3.16
5983	9331	4.739046	ATTTGTTTCTCTCTCGCTTGTG	57.261	40.909	0.00	0.00	0.00	3.33
5984	9332	2.890808	TGTTTCTCTCTCGCTTGTGT	57.109	45.000	0.00	0.00	0.00	3.72
5985	9333	2.743938	TGTTTCTCTCTCGCTTGTGTC	58.256	47.619	0.00	0.00	0.00	3.67
5986	9334	2.362397	TGTTTCTCTCTCGCTTGTGTCT	59.638	45.455	0.00	0.00	0.00	3.41
5987	9335	3.181475	TGTTTCTCTCTCGCTTGTGTCTT	60.181	43.478	0.00	0.00	0.00	3.01
5988	9336	2.713895	TCTCTCTCGCTTGTGTCTTG	57.286	50.000	0.00	0.00	0.00	3.02
5989	9337	2.230660	TCTCTCTCGCTTGTGTCTTGA	58.769	47.619	0.00	0.00	0.00	3.02
5990	9338	2.822561	TCTCTCTCGCTTGTGTCTTGAT	59.177	45.455	0.00	0.00	0.00	2.57
5991	9339	3.256879	TCTCTCTCGCTTGTGTCTTGATT	59.743	43.478	0.00	0.00	0.00	2.57
5992	9340	4.459337	TCTCTCTCGCTTGTGTCTTGATTA	59.541	41.667	0.00	0.00	0.00	1.75
5993	9341	4.486090	TCTCTCGCTTGTGTCTTGATTAC	58.514	43.478	0.00	0.00	0.00	1.89
5994	9342	4.022329	TCTCTCGCTTGTGTCTTGATTACA	60.022	41.667	0.00	0.00	0.00	2.41
5995	9343	4.820897	TCTCGCTTGTGTCTTGATTACAT	58.179	39.130	0.00	0.00	0.00	2.29
5996	9344	5.237815	TCTCGCTTGTGTCTTGATTACATT	58.762	37.500	0.00	0.00	0.00	2.71
5997	9345	5.700832	TCTCGCTTGTGTCTTGATTACATTT	59.299	36.000	0.00	0.00	0.00	2.32
5998	9346	6.871492	TCTCGCTTGTGTCTTGATTACATTTA	59.129	34.615	0.00	0.00	0.00	1.40
5999	9347	7.386573	TCTCGCTTGTGTCTTGATTACATTTAA	59.613	33.333	0.00	0.00	0.00	1.52
6000	9348	7.295201	TCGCTTGTGTCTTGATTACATTTAAC	58.705	34.615	0.00	0.00	0.00	2.01
6001	9349	7.041712	TCGCTTGTGTCTTGATTACATTTAACA	60.042	33.333	0.00	0.00	0.00	2.41
6002	9350	7.269084	CGCTTGTGTCTTGATTACATTTAACAG	59.731	37.037	0.00	0.00	0.00	3.16
6031	9379	4.141158	ACTCTTGGTTTGAAATGAGACCCT	60.141	41.667	0.00	0.00	0.00	4.34
6034	9382	4.301072	TGGTTTGAAATGAGACCCTAGG	57.699	45.455	0.06	0.06	0.00	3.02
6053	9401	7.904205	CCCTAGGGGTAAAGTTAGTATACATG	58.096	42.308	21.44	0.00	38.25	3.21
6074	9426	4.261801	TGTTATTTAGACAGCAAGCCTCC	58.738	43.478	0.00	0.00	0.00	4.30
6078	9430	3.439857	TTAGACAGCAAGCCTCCATTT	57.560	42.857	0.00	0.00	0.00	2.32
6086	9438	5.480073	ACAGCAAGCCTCCATTTTTATTGTA	59.520	36.000	0.00	0.00	0.00	2.41
6094	9446	7.337942	AGCCTCCATTTTTATTGTAGACAGAAG	59.662	37.037	0.00	0.00	0.00	2.85
6098	9450	6.405842	CCATTTTTATTGTAGACAGAAGGCCC	60.406	42.308	0.00	0.00	0.00	5.80
6104	9456	1.134068	GTAGACAGAAGGCCCCCATTC	60.134	57.143	0.00	0.00	0.00	2.67
6107	9459	0.786435	ACAGAAGGCCCCCATTCTTT	59.214	50.000	0.00	0.00	33.51	2.52

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	2.159184	GGTTTACTACAGGTAGACCGCC	60.159	54.545	13.11	6.37	42.93	6.13
4	5	4.502016	GCCTTGGTTTACTACAGGTAGAC	58.498	47.826	13.11	1.49	36.97	2.59
6	7	3.262405	TGGCCTTGGTTTACTACAGGTAG	59.738	47.826	3.32	4.95	39.04	3.18
7	8	3.008266	GTGGCCTTGGTTTACTACAGGTA	59.992	47.826	3.32	0.00	0.00	3.08
8	9	2.059490	TGGCCTTGGTTTACTACAGGT	58.941	47.619	3.32	0.00	0.00	4.00
9	10	2.039879	AGTGGCCTTGGTTTACTACAGG	59.960	50.000	3.32	0.00	0.00	4.00
10	11	3.418684	AGTGGCCTTGGTTTACTACAG	57.581	47.619	3.32	0.00	0.00	2.74
12	13	3.305131	GCAAAGTGGCCTTGGTTTACTAC	60.305	47.826	3.32	0.00	0.00	2.73
13	14	2.888414	GCAAAGTGGCCTTGGTTTACTA	59.112	45.455	3.32	0.00	0.00	1.82
16	17	1.781786	TGCAAAGTGGCCTTGGTTTA	58.218	45.000	3.32	0.00	0.00	2.01
17	18	0.908198	TTGCAAAGTGGCCTTGGTTT	59.092	45.000	3.32	0.00	0.00	3.27
19	20	2.126951	CTTGCAAAGTGGCCTTGGT	58.873	52.632	3.32	0.00	39.70	3.67
30	31	2.151202	GATTGGACCGAGACTTGCAAA	58.849	47.619	0.00	0.00	0.00	3.68
31	32	1.610624	GGATTGGACCGAGACTTGCAA	60.611	52.381	0.00	0.00	0.00	4.08
32	33	0.036388	GGATTGGACCGAGACTTGCA	60.036	55.000	0.00	0.00	0.00	4.08
33	34	2.768834	GGATTGGACCGAGACTTGC	58.231	57.895	0.00	0.00	0.00	4.01
45	46	4.202212	GGGGATTAAACATTTCCGGATTGG	60.202	45.833	4.15	0.00	40.09	3.16
46	47	4.404073	TGGGGATTAAACATTTCCGGATTG	59.596	41.667	4.15	9.34	0.00	2.67
47	48	4.404394	GTGGGGATTAAACATTTCCGGATT	59.596	41.667	4.15	0.00	0.00	3.01
48	49	3.958147	GTGGGGATTAAACATTTCCGGAT	59.042	43.478	4.15	0.00	0.00	4.18
49	50	3.245300	TGTGGGGATTAAACATTTCCGGA	60.245	43.478	0.00	0.00	0.00	5.14
50	51	3.093057	TGTGGGGATTAAACATTTCCGG	58.907	45.455	0.00	0.00	0.00	5.14
51	52	3.508012	TGTGTGGGGATTAAACATTTCCG	59.492	43.478	0.00	0.00	0.00	4.30
52	53	4.617298	CGTGTGTGGGGATTAAACATTTCC	60.617	45.833	0.00	0.00	0.00	3.13
54	55	4.145807	TCGTGTGTGGGGATTAAACATTT	58.854	39.130	0.00	0.00	0.00	2.32
55	56	3.757270	TCGTGTGTGGGGATTAAACATT	58.243	40.909	0.00	0.00	0.00	2.71
56	57	3.426787	TCGTGTGTGGGGATTAAACAT	57.573	42.857	0.00	0.00	0.00	2.71
58	59	3.816523	TCTTTCGTGTGTGGGGATTAAAC	59.183	43.478	0.00	0.00	0.00	2.01
59	60	4.088056	TCTTTCGTGTGTGGGGATTAAA	57.912	40.909	0.00	0.00	0.00	1.52
61	62	3.773418	TTCTTTCGTGTGTGGGGATTA	57.227	42.857	0.00	0.00	0.00	1.75
62	63	2.649531	TTCTTTCGTGTGTGGGGATT	57.350	45.000	0.00	0.00	0.00	3.01
64	65	1.961793	CTTTCTTTCGTGTGTGGGGA	58.038	50.000	0.00	0.00	0.00	4.81
66	67	1.308998	AGCTTTCTTTCGTGTGTGGG	58.691	50.000	0.00	0.00	0.00	4.61
67	68	3.390135	TCTAGCTTTCTTTCGTGTGTGG	58.610	45.455	0.00	0.00	0.00	4.17
68	69	5.403897	TTTCTAGCTTTCTTTCGTGTGTG	57.596	39.130	0.00	0.00	0.00	3.82
70	71	5.385617	CCATTTCTAGCTTTCTTTCGTGTG	58.614	41.667	0.00	0.00	0.00	3.82
71	72	4.083271	GCCATTTCTAGCTTTCTTTCGTGT	60.083	41.667	0.00	0.00	0.00	4.49
72	73	4.406943	GCCATTTCTAGCTTTCTTTCGTG	58.593	43.478	0.00	0.00	0.00	4.35
73	74	3.440522	GGCCATTTCTAGCTTTCTTTCGT	59.559	43.478	0.00	0.00	0.00	3.85
74	75	3.440173	TGGCCATTTCTAGCTTTCTTTCG	59.560	43.478	0.00	0.00	0.00	3.46
75	76	4.380973	GGTGGCCATTTCTAGCTTTCTTTC	60.381	45.833	9.72	0.00	0.00	2.62
76	77	3.511540	GGTGGCCATTTCTAGCTTTCTTT	59.488	43.478	9.72	0.00	0.00	2.52
77	78	3.092301	GGTGGCCATTTCTAGCTTTCTT	58.908	45.455	9.72	0.00	0.00	2.52
78	79	2.728007	GGTGGCCATTTCTAGCTTTCT	58.272	47.619	9.72	0.00	0.00	2.52
80	81	1.463674	CGGTGGCCATTTCTAGCTTT	58.536	50.000	9.72	0.00	0.00	3.51
81	82	0.394352	CCGGTGGCCATTTCTAGCTT	60.394	55.000	9.72	0.00	0.00	3.74
82	83	1.224592	CCGGTGGCCATTTCTAGCT	59.775	57.895	9.72	0.00	0.00	3.32
84	85	0.830648	TCTCCGGTGGCCATTTCTAG	59.169	55.000	9.72	3.56	0.00	2.43
86	87	0.035056	CTTCTCCGGTGGCCATTTCT	60.035	55.000	9.72	0.00	0.00	2.52
87	88	0.035439	TCTTCTCCGGTGGCCATTTC	60.035	55.000	9.72	0.46	0.00	2.17
88	89	0.404040	TTCTTCTCCGGTGGCCATTT	59.596	50.000	9.72	0.00	0.00	2.32
89	90	0.322546	GTTCTTCTCCGGTGGCCATT	60.323	55.000	9.72	0.00	0.00	3.16
91	92	2.747686	GTTCTTCTCCGGTGGCCA	59.252	61.111	0.00	0.00	0.00	5.36
92	93	2.434359	CGTTCTTCTCCGGTGGCC	60.434	66.667	0.00	0.00	0.00	5.36
93	94	1.005394	TTCGTTCTTCTCCGGTGGC	60.005	57.895	0.00	0.00	0.00	5.01
95	96	1.344942	CGCTTCGTTCTTCTCCGGTG	61.345	60.000	0.00	0.00	0.00	4.94
96	97	1.080705	CGCTTCGTTCTTCTCCGGT	60.081	57.895	0.00	0.00	0.00	5.28
97	98	2.445438	GCGCTTCGTTCTTCTCCGG	61.445	63.158	0.00	0.00	0.00	5.14
98	99	2.445438	GGCGCTTCGTTCTTCTCCG	61.445	63.158	7.64	0.00	0.00	4.63
101	102	2.430382	TTCCGGCGCTTCGTTCTTCT	62.430	55.000	7.64	0.00	0.00	2.85
103	104	1.375523	ATTCCGGCGCTTCGTTCTT	60.376	52.632	7.64	0.00	0.00	2.52
105	106	2.399611	CATTCCGGCGCTTCGTTC	59.600	61.111	7.64	0.00	0.00	3.95
106	107	3.799755	GCATTCCGGCGCTTCGTT	61.800	61.111	7.64	0.00	0.00	3.85
108	109	2.794627	TTTTGCATTCCGGCGCTTCG	62.795	55.000	7.64	2.53	36.28	3.79
111	112	2.258286	GTTTTGCATTCCGGCGCT	59.742	55.556	7.64	0.00	36.28	5.92
112	113	3.171911	CGTTTTGCATTCCGGCGC	61.172	61.111	0.00	0.00	36.28	6.53
113	114	2.503809	CCGTTTTGCATTCCGGCG	60.504	61.111	0.00	0.00	36.28	6.46
114	115	1.443702	GTCCGTTTTGCATTCCGGC	60.444	57.895	12.17	5.68	40.23	6.13
115	116	0.312416	TTGTCCGTTTTGCATTCCGG	59.688	50.000	11.08	11.08	41.75	5.14
117	118	1.404477	CGTTGTCCGTTTTGCATTCC	58.596	50.000	0.00	0.00	0.00	3.01
118	119	1.404477	CCGTTGTCCGTTTTGCATTC	58.596	50.000	0.00	0.00	33.66	2.67
119	120	0.031449	CCCGTTGTCCGTTTTGCATT	59.969	50.000	0.00	0.00	33.66	3.56
122	123	0.100861	TTTCCCGTTGTCCGTTTTGC	59.899	50.000	0.00	0.00	33.66	3.68
123	124	2.563471	TTTTCCCGTTGTCCGTTTTG	57.437	45.000	0.00	0.00	33.66	2.44
124	125	3.449632	CATTTTTCCCGTTGTCCGTTTT	58.550	40.909	0.00	0.00	33.66	2.43
125	126	2.800273	GCATTTTTCCCGTTGTCCGTTT	60.800	45.455	0.00	0.00	33.66	3.60
126	127	1.269361	GCATTTTTCCCGTTGTCCGTT	60.269	47.619	0.00	0.00	33.66	4.44
127	128	0.312729	GCATTTTTCCCGTTGTCCGT	59.687	50.000	0.00	0.00	33.66	4.69
129	130	1.401018	CGAGCATTTTTCCCGTTGTCC	60.401	52.381	0.00	0.00	0.00	4.02
131	132	1.600023	TCGAGCATTTTTCCCGTTGT	58.400	45.000	0.00	0.00	0.00	3.32
132	133	2.697431	TTCGAGCATTTTTCCCGTTG	57.303	45.000	0.00	0.00	0.00	4.10
133	134	3.754323	TGTATTCGAGCATTTTTCCCGTT	59.246	39.130	0.00	0.00	0.00	4.44
134	135	3.340034	TGTATTCGAGCATTTTTCCCGT	58.660	40.909	0.00	0.00	0.00	5.28
135	136	4.094294	TCTTGTATTCGAGCATTTTTCCCG	59.906	41.667	0.00	0.00	0.00	5.14
137	138	6.251549	GTCTCTTGTATTCGAGCATTTTTCC	58.748	40.000	0.00	0.00	0.00	3.13
138	139	5.954349	CGTCTCTTGTATTCGAGCATTTTTC	59.046	40.000	0.00	0.00	0.00	2.29
139	140	5.637810	TCGTCTCTTGTATTCGAGCATTTTT	59.362	36.000	0.00	0.00	0.00	1.94
140	141	5.168569	TCGTCTCTTGTATTCGAGCATTTT	58.831	37.500	0.00	0.00	0.00	1.82
142	143	4.371855	TCGTCTCTTGTATTCGAGCATT	57.628	40.909	0.00	0.00	0.00	3.56
143	144	4.106197	GTTCGTCTCTTGTATTCGAGCAT	58.894	43.478	0.00	0.00	33.45	3.79
145	146	3.301116	GTGTTCGTCTCTTGTATTCGAGC	59.699	47.826	0.00	0.00	33.73	5.03
146	147	3.538782	CGTGTTCGTCTCTTGTATTCGAG	59.461	47.826	0.00	0.00	32.39	4.04
147	148	3.485633	CGTGTTCGTCTCTTGTATTCGA	58.514	45.455	0.00	0.00	0.00	3.71
160	161	8.475436	TGCATTGCATTTACATACGTGTTCGT	62.475	38.462	7.38	0.00	42.94	3.85
161	162	4.202158	GCATTGCATTTACATACGTGTTCG	59.798	41.667	3.15	0.00	39.77	3.95
164	165	4.083057	TGTGCATTGCATTTACATACGTGT	60.083	37.500	15.49	0.00	41.91	4.49
166	167	4.693538	TGTGCATTGCATTTACATACGT	57.306	36.364	15.49	0.00	41.91	3.57
167	168	5.272397	TCATGTGCATTGCATTTACATACG	58.728	37.500	15.49	3.30	41.91	3.06
168	169	6.919115	TCATCATGTGCATTGCATTTACATAC	59.081	34.615	15.49	0.00	41.91	2.39
169	170	6.919115	GTCATCATGTGCATTGCATTTACATA	59.081	34.615	15.49	3.79	41.91	2.29
170	171	5.751509	GTCATCATGTGCATTGCATTTACAT	59.248	36.000	15.49	10.38	41.91	2.29
172	173	5.103687	TGTCATCATGTGCATTGCATTTAC	58.896	37.500	15.49	2.17	41.91	2.01
174	175	4.195225	TGTCATCATGTGCATTGCATTT	57.805	36.364	15.49	2.46	41.91	2.32
175	176	3.878160	TGTCATCATGTGCATTGCATT	57.122	38.095	15.49	2.84	41.91	3.56
176	177	3.716601	CATGTCATCATGTGCATTGCAT	58.283	40.909	15.49	0.00	44.37	3.96
177	178	3.157932	CATGTCATCATGTGCATTGCA	57.842	42.857	7.38	7.38	44.37	4.08
184	185	7.066284	ATGCATCTCATATCATGTCATCATGTG	59.934	37.037	0.00	0.00	41.56	3.21
185	186	7.066284	CATGCATCTCATATCATGTCATCATGT	59.934	37.037	0.00	0.27	41.53	3.21
192	193	6.796705	TTGTCATGCATCTCATATCATGTC	57.203	37.500	0.00	0.00	37.95	3.06
193	194	6.940298	TCATTGTCATGCATCTCATATCATGT	59.060	34.615	0.00	0.00	37.95	3.21
194	195	7.094805	TGTCATTGTCATGCATCTCATATCATG	60.095	37.037	0.00	0.59	38.05	3.07
195	196	6.940298	TGTCATTGTCATGCATCTCATATCAT	59.060	34.615	0.00	0.00	33.19	2.45
196	197	6.292923	TGTCATTGTCATGCATCTCATATCA	58.707	36.000	0.00	0.00	33.19	2.15
197	198	6.796705	TGTCATTGTCATGCATCTCATATC	57.203	37.500	0.00	0.00	33.19	1.63
198	199	7.576861	TTTGTCATTGTCATGCATCTCATAT	57.423	32.000	0.00	0.00	33.19	1.78
201	202	5.907866	ATTTGTCATTGTCATGCATCTCA	57.092	34.783	0.00	0.00	0.00	3.27
203	204	7.031372	GTGTTATTTGTCATTGTCATGCATCT	58.969	34.615	0.00	0.00	0.00	2.90
204	205	6.807720	TGTGTTATTTGTCATTGTCATGCATC	59.192	34.615	0.00	0.00	0.00	3.91
205	206	6.587226	GTGTGTTATTTGTCATTGTCATGCAT	59.413	34.615	0.00	0.00	0.00	3.96
206	207	5.919707	GTGTGTTATTTGTCATTGTCATGCA	59.080	36.000	0.00	0.00	0.00	3.96
208	209	5.568677	CCGTGTGTTATTTGTCATTGTCATG	59.431	40.000	0.00	0.00	0.00	3.07
209	210	5.471797	TCCGTGTGTTATTTGTCATTGTCAT	59.528	36.000	0.00	0.00	0.00	3.06
210	211	4.816925	TCCGTGTGTTATTTGTCATTGTCA	59.183	37.500	0.00	0.00	0.00	3.58
211	212	5.178623	TCTCCGTGTGTTATTTGTCATTGTC	59.821	40.000	0.00	0.00	0.00	3.18
212	213	5.049680	GTCTCCGTGTGTTATTTGTCATTGT	60.050	40.000	0.00	0.00	0.00	2.71
214	215	5.060506	TGTCTCCGTGTGTTATTTGTCATT	58.939	37.500	0.00	0.00	0.00	2.57
215	216	4.637276	TGTCTCCGTGTGTTATTTGTCAT	58.363	39.130	0.00	0.00	0.00	3.06
216	217	4.061357	TGTCTCCGTGTGTTATTTGTCA	57.939	40.909	0.00	0.00	0.00	3.58
217	218	5.412526	TTTGTCTCCGTGTGTTATTTGTC	57.587	39.130	0.00	0.00	0.00	3.18
218	219	5.821516	TTTTGTCTCCGTGTGTTATTTGT	57.178	34.783	0.00	0.00	0.00	2.83
219	220	5.457473	GGTTTTTGTCTCCGTGTGTTATTTG	59.543	40.000	0.00	0.00	0.00	2.32
220	221	5.450826	GGGTTTTTGTCTCCGTGTGTTATTT	60.451	40.000	0.00	0.00	0.00	1.40
221	222	4.037089	GGGTTTTTGTCTCCGTGTGTTATT	59.963	41.667	0.00	0.00	0.00	1.40
222	223	3.566742	GGGTTTTTGTCTCCGTGTGTTAT	59.433	43.478	0.00	0.00	0.00	1.89
226	227	0.306533	CGGGTTTTTGTCTCCGTGTG	59.693	55.000	0.00	0.00	37.92	3.82
228	229	1.003223	GTTCGGGTTTTTGTCTCCGTG	60.003	52.381	0.00	0.00	42.71	4.94
230	231	0.589708	GGTTCGGGTTTTTGTCTCCG	59.410	55.000	0.00	0.00	43.42	4.63
231	232	0.956633	GGGTTCGGGTTTTTGTCTCC	59.043	55.000	0.00	0.00	0.00	3.71
234	235	0.589708	CTCGGGTTCGGGTTTTTGTC	59.410	55.000	0.00	0.00	36.95	3.18
235	236	0.180878	TCTCGGGTTCGGGTTTTTGT	59.819	50.000	0.00	0.00	38.21	2.83
236	237	1.530323	ATCTCGGGTTCGGGTTTTTG	58.470	50.000	0.00	0.00	38.21	2.44
237	238	3.421919	TTATCTCGGGTTCGGGTTTTT	57.578	42.857	0.00	0.00	38.21	1.94
240	241	4.758773	TTTATTATCTCGGGTTCGGGTT	57.241	40.909	0.00	0.00	38.21	4.11
241	242	4.968971	ATTTATTATCTCGGGTTCGGGT	57.031	40.909	0.00	0.00	38.21	5.28
242	243	8.255905	AGTTATATTTATTATCTCGGGTTCGGG	58.744	37.037	0.00	0.00	38.44	5.14
243	244	9.649167	AAGTTATATTTATTATCTCGGGTTCGG	57.351	33.333	0.00	0.00	36.95	4.30
256	257	8.063630	CGTTTCCGGCGTTAAGTTATATTTATT	58.936	33.333	6.01	0.00	0.00	1.40
258	259	6.932051	CGTTTCCGGCGTTAAGTTATATTTA	58.068	36.000	6.01	0.00	0.00	1.40
259	260	5.798910	CGTTTCCGGCGTTAAGTTATATTT	58.201	37.500	6.01	0.00	0.00	1.40
260	261	5.393902	CGTTTCCGGCGTTAAGTTATATT	57.606	39.130	6.01	0.00	0.00	1.28
275	276	0.882927	TCCAACTCTTGCCGTTTCCG	60.883	55.000	0.00	0.00	0.00	4.30
277	278	3.500680	TGTATTCCAACTCTTGCCGTTTC	59.499	43.478	0.00	0.00	0.00	2.78
278	279	3.482436	TGTATTCCAACTCTTGCCGTTT	58.518	40.909	0.00	0.00	0.00	3.60
281	282	4.701956	ATTTGTATTCCAACTCTTGCCG	57.298	40.909	0.00	0.00	31.20	5.69
283	284	5.885912	TCCCTATTTGTATTCCAACTCTTGC	59.114	40.000	0.00	0.00	31.20	4.01
284	285	7.938140	TTCCCTATTTGTATTCCAACTCTTG	57.062	36.000	0.00	0.00	31.20	3.02
285	286	8.170730	ACTTTCCCTATTTGTATTCCAACTCTT	58.829	33.333	0.00	0.00	31.20	2.85
286	287	7.699878	ACTTTCCCTATTTGTATTCCAACTCT	58.300	34.615	0.00	0.00	31.20	3.24
287	288	7.939784	ACTTTCCCTATTTGTATTCCAACTC	57.060	36.000	0.00	0.00	31.20	3.01
288	289	9.239551	GTAACTTTCCCTATTTGTATTCCAACT	57.760	33.333	0.00	0.00	31.20	3.16
289	290	9.016438	TGTAACTTTCCCTATTTGTATTCCAAC	57.984	33.333	0.00	0.00	31.20	3.77
290	291	9.762381	ATGTAACTTTCCCTATTTGTATTCCAA	57.238	29.630	0.00	0.00	0.00	3.53
292	293	8.847196	GGATGTAACTTTCCCTATTTGTATTCC	58.153	37.037	0.00	0.00	0.00	3.01
293	294	8.557029	CGGATGTAACTTTCCCTATTTGTATTC	58.443	37.037	0.00	0.00	0.00	1.75
294	295	7.501225	CCGGATGTAACTTTCCCTATTTGTATT	59.499	37.037	0.00	0.00	0.00	1.89
295	296	6.996282	CCGGATGTAACTTTCCCTATTTGTAT	59.004	38.462	0.00	0.00	0.00	2.29
296	297	6.350906	CCGGATGTAACTTTCCCTATTTGTA	58.649	40.000	0.00	0.00	0.00	2.41
298	299	4.578928	CCCGGATGTAACTTTCCCTATTTG	59.421	45.833	0.73	0.00	0.00	2.32
299	300	4.385977	CCCCGGATGTAACTTTCCCTATTT	60.386	45.833	0.73	0.00	0.00	1.40
300	301	3.137728	CCCCGGATGTAACTTTCCCTATT	59.862	47.826	0.73	0.00	0.00	1.73
302	303	2.121129	CCCCGGATGTAACTTTCCCTA	58.879	52.381	0.73	0.00	0.00	3.53
303	304	0.916809	CCCCGGATGTAACTTTCCCT	59.083	55.000	0.73	0.00	0.00	4.20
304	305	0.622136	ACCCCGGATGTAACTTTCCC	59.378	55.000	0.73	0.00	0.00	3.97
305	306	1.003928	ACACCCCGGATGTAACTTTCC	59.996	52.381	0.73	0.00	0.00	3.13
306	307	2.484742	ACACCCCGGATGTAACTTTC	57.515	50.000	0.73	0.00	0.00	2.62
308	309	2.638855	TGTAACACCCCGGATGTAACTT	59.361	45.455	0.73	0.00	0.00	2.66
309	310	2.027837	GTGTAACACCCCGGATGTAACT	60.028	50.000	0.73	0.00	36.32	2.24
310	311	2.349590	GTGTAACACCCCGGATGTAAC	58.650	52.381	0.73	3.46	36.32	2.50
311	312	1.067000	CGTGTAACACCCCGGATGTAA	60.067	52.381	0.73	0.00	35.74	2.41
312	313	0.531657	CGTGTAACACCCCGGATGTA	59.468	55.000	0.73	0.00	35.74	2.29
313	314	1.294138	CGTGTAACACCCCGGATGT	59.706	57.895	0.73	3.79	35.74	3.06
314	315	1.448893	CCGTGTAACACCCCGGATG	60.449	63.158	0.73	2.98	43.01	3.51
315	316	2.983791	CCGTGTAACACCCCGGAT	59.016	61.111	0.73	0.00	43.01	4.18
316	317	4.006357	GCCGTGTAACACCCCGGA	62.006	66.667	0.73	0.00	43.01	5.14
317	318	3.945304	GAGCCGTGTAACACCCCGG	62.945	68.421	0.00	0.00	43.22	5.73
318	319	2.433664	GAGCCGTGTAACACCCCG	60.434	66.667	0.00	0.00	35.74	5.73
319	320	2.433664	CGAGCCGTGTAACACCCC	60.434	66.667	0.00	0.00	35.74	4.95
320	321	1.445582	CTCGAGCCGTGTAACACCC	60.446	63.158	0.00	0.00	35.74	4.61
321	322	1.445582	CCTCGAGCCGTGTAACACC	60.446	63.158	6.99	0.00	35.74	4.16
322	323	2.092882	GCCTCGAGCCGTGTAACAC	61.093	63.158	6.99	0.00	35.74	3.32
324	325	0.248539	CTAGCCTCGAGCCGTGTAAC	60.249	60.000	6.99	0.00	45.47	2.50
327	328	3.141488	CCTAGCCTCGAGCCGTGT	61.141	66.667	6.99	0.00	45.47	4.49
328	329	3.905678	CCCTAGCCTCGAGCCGTG	61.906	72.222	6.99	0.00	45.47	4.94
329	330	3.959329	AACCCTAGCCTCGAGCCGT	62.959	63.158	6.99	0.00	45.47	5.68
492	497	5.182380	AGAAGCCCGTGAAAATTTATTTCGA	59.818	36.000	0.00	0.00	0.00	3.71
541	546	8.791327	AAATTGCATTTAGGTCCCAAATAAAG	57.209	30.769	0.00	0.00	0.00	1.85
959	966	1.382557	TCCGGCCTAGCTGATCCAA	60.383	57.895	0.00	0.00	37.02	3.53
967	974	2.123640	AGAGGTCTCCGGCCTAGC	60.124	66.667	0.00	0.00	36.29	3.42
985	992	2.433217	CCATGGGGCCTAAGCAATG	58.567	57.895	2.85	0.00	42.56	2.82
1026	1033	4.883354	CCCTCCATGGCCTTCCGC	62.883	72.222	6.96	0.00	34.14	5.54
1084	1091	4.424711	ACCATGCCCGCATCCGTT	62.425	61.111	0.00	0.00	33.90	4.44
1096	1103	1.153168	CCCCTAACCGCTGACCATG	60.153	63.158	0.00	0.00	0.00	3.66
1098	1105	3.712907	GCCCCTAACCGCTGACCA	61.713	66.667	0.00	0.00	0.00	4.02
1200	1207	2.398754	TCTCTCTCTTCCCAACACCA	57.601	50.000	0.00	0.00	0.00	4.17
1210	1217	1.411977	CGCCATCCACATCTCTCTCTT	59.588	52.381	0.00	0.00	0.00	2.85
1229	1240	1.205064	CTCTCTTTGCACAACGCCG	59.795	57.895	0.00	0.00	41.33	6.46
1234	1245	1.159285	CGCCATCTCTCTTTGCACAA	58.841	50.000	0.00	0.00	0.00	3.33
1236	1247	1.986575	GCCGCCATCTCTCTTTGCAC	61.987	60.000	0.00	0.00	0.00	4.57
1415	1439	3.053455	GCTACAGGCTAGCAAGTAATCG	58.947	50.000	18.24	7.88	40.14	3.34
1698	1727	4.993584	TGAACACCGCAAAATTAAATGCAT	59.006	33.333	0.00	0.00	42.68	3.96
1781	1811	4.870991	GGTTAGAGCATTACTTGTCCTGTC	59.129	45.833	0.00	0.00	0.00	3.51
1925	1957	9.535878	CCATTATAGAGTTTCTCTCCTACAAAC	57.464	37.037	2.41	0.00	43.71	2.93
2239	2516	1.449601	GGAGCCGAGCGATGGAAAA	60.450	57.895	0.00	0.00	0.00	2.29
2295	2572	9.423061	GCCTTAATTTTCTGAATACAAACACAT	57.577	29.630	0.00	0.00	0.00	3.21
2414	2691	9.620660	TTAAAAGATTTTTAGCGATGGAGTTTC	57.379	29.630	0.00	0.00	0.00	2.78
2495	2774	1.060937	CACAGATTAAGGCGCGCAC	59.939	57.895	34.42	21.95	0.00	5.34
2609	2902	0.034380	ACCTGTCGAGCAGCCTACTA	60.034	55.000	8.85	0.00	43.71	1.82
2659	2952	8.703336	CATTCATAGTTATAGTCATGAACCACG	58.297	37.037	0.00	0.00	39.49	4.94
2711	3004	4.908736	ACCGCAATGATCATTAAAGAACG	58.091	39.130	20.32	15.41	0.00	3.95
2814	3107	4.575885	TGGAAGTAGGTGTGCATTTCTAC	58.424	43.478	12.45	12.45	34.08	2.59
2841	3134	3.170991	ACTGCAAGGAGACCAGTACTA	57.829	47.619	0.00	0.00	38.00	1.82
2871	3164	5.178438	CAGACTGTTTCAGAAGCTAAACCTC	59.822	44.000	7.24	3.13	35.23	3.85
2876	3169	4.342862	AGCAGACTGTTTCAGAAGCTAA	57.657	40.909	3.99	0.00	35.84	3.09
2926	3221	8.682128	TTTCTACAAAAGAACACACAAACATC	57.318	30.769	0.00	0.00	44.02	3.06
2949	3244	1.656818	CGTCTGGGCATGGCGATTTT	61.657	55.000	13.76	0.00	0.00	1.82
3001	3296	0.238553	GGTGCAGCGGTTTTCTTCTC	59.761	55.000	0.00	0.00	0.00	2.87
3020	3315	3.871485	AGCTTCTGCATAGGTTCTTCTG	58.129	45.455	0.00	0.00	42.74	3.02
3053	3348	0.106708	TGAAAGAAGCTGCACCTCGT	59.893	50.000	1.02	0.00	0.00	4.18
3062	3357	3.589288	AGTATGAGGGGTTGAAAGAAGCT	59.411	43.478	0.00	0.00	0.00	3.74
3202	3497	0.253044	GTCACTTGAGCCTGGCCATA	59.747	55.000	16.57	0.00	0.00	2.74
3228	3523	6.520272	ACAACATAAAAAGCAGCACCATTTA	58.480	32.000	0.00	0.00	0.00	1.40
3418	3717	4.718774	AGAAAGGCCAGAGATGATAACTGA	59.281	41.667	5.01	0.00	34.07	3.41
3566	3865	4.540824	GCTTGAAGCTGGACAAAAAGTAG	58.459	43.478	10.44	0.00	38.45	2.57
3659	3958	5.560724	TGAGCAGCCAAATACTCTAGTTTT	58.439	37.500	0.00	0.00	0.00	2.43
3711	4010	7.888546	ACCCTAACTGAAAGCATAAAATGTAGT	59.111	33.333	0.00	0.00	37.60	2.73
3751	4050	2.093973	ACGTAAGGTTGCCTCATCTCTG	60.094	50.000	0.00	0.00	46.39	3.35
3784	4083	5.593679	TTTAGGAACGGAGGAAGTATCTG	57.406	43.478	0.00	0.00	0.00	2.90
3791	4090	5.956563	AGACTTCTATTTAGGAACGGAGGAA	59.043	40.000	0.00	0.00	0.00	3.36
3840	4139	7.113965	GTGTAGATTCACTCATTTTGCTTTGTG	59.886	37.037	0.00	0.00	35.68	3.33
3875	4174	4.003648	CTGGAAGTGTGATAAAGGGACAC	58.996	47.826	0.00	0.00	40.29	3.67
3933	4232	4.870221	TCTTCTGCATCGAATCATGTTG	57.130	40.909	0.00	0.00	0.00	3.33
4181	4481	6.147821	GCTAGACAGAAAGTAAGCAAACATCA	59.852	38.462	0.00	0.00	38.54	3.07
4235	4535	1.067425	TGAGGACGAACAATACACGGG	60.067	52.381	0.00	0.00	0.00	5.28
4236	4536	2.357327	TGAGGACGAACAATACACGG	57.643	50.000	0.00	0.00	0.00	4.94
4298	4598	8.260818	AGCATGTCTGTATGTACTCAAATAAGT	58.739	33.333	0.00	0.00	0.00	2.24
4312	4612	5.352569	GCACACTAAAGAAGCATGTCTGTAT	59.647	40.000	0.00	0.00	0.00	2.29
4609	5294	9.890629	TTCCTAAGTACGTCTCTAGTAATACAA	57.109	33.333	0.00	0.00	0.00	2.41
4610	5295	9.890629	TTTCCTAAGTACGTCTCTAGTAATACA	57.109	33.333	0.00	0.00	0.00	2.29
4712	5400	2.531522	AACAAACATTCTGCTTGGCC	57.468	45.000	0.00	0.00	28.34	5.36
4759	5447	0.965439	CCCCGCCAAAATCAAGAACA	59.035	50.000	0.00	0.00	0.00	3.18
4804	5492	8.816640	ATATTCAAAAATTGGTGAGTGTTGAC	57.183	30.769	0.00	0.00	0.00	3.18
4808	5496	8.306761	GGAAGATATTCAAAAATTGGTGAGTGT	58.693	33.333	1.97	0.00	0.00	3.55
4809	5497	8.306038	TGGAAGATATTCAAAAATTGGTGAGTG	58.694	33.333	1.97	0.00	0.00	3.51
4810	5498	8.421249	TGGAAGATATTCAAAAATTGGTGAGT	57.579	30.769	1.97	0.00	0.00	3.41
4811	5499	9.880157	AATGGAAGATATTCAAAAATTGGTGAG	57.120	29.630	1.97	0.00	0.00	3.51
4812	5500	9.656040	CAATGGAAGATATTCAAAAATTGGTGA	57.344	29.630	1.97	0.00	0.00	4.02
4813	5501	8.392612	GCAATGGAAGATATTCAAAAATTGGTG	58.607	33.333	1.97	0.00	0.00	4.17
4814	5502	8.323567	AGCAATGGAAGATATTCAAAAATTGGT	58.676	29.630	1.97	8.58	0.00	3.67
4815	5503	8.726870	AGCAATGGAAGATATTCAAAAATTGG	57.273	30.769	1.97	0.00	0.00	3.16
4828	5516	9.860898	GTTGAACTAAATTTAGCAATGGAAGAT	57.139	29.630	22.45	0.00	34.09	2.40
4829	5517	8.855110	TGTTGAACTAAATTTAGCAATGGAAGA	58.145	29.630	22.45	5.72	34.09	2.87
4830	5518	9.643693	ATGTTGAACTAAATTTAGCAATGGAAG	57.356	29.630	22.45	1.58	34.09	3.46
4831	5519	9.995003	AATGTTGAACTAAATTTAGCAATGGAA	57.005	25.926	22.45	6.35	34.09	3.53
4832	5520	9.995003	AAATGTTGAACTAAATTTAGCAATGGA	57.005	25.926	22.45	9.81	34.09	3.41
4835	5523	9.995003	TGGAAATGTTGAACTAAATTTAGCAAT	57.005	25.926	22.45	10.94	34.09	3.56
4836	5524	9.255304	GTGGAAATGTTGAACTAAATTTAGCAA	57.745	29.630	22.45	16.60	34.09	3.91
4837	5525	8.637986	AGTGGAAATGTTGAACTAAATTTAGCA	58.362	29.630	22.45	13.37	34.09	3.49
4838	5526	9.129209	GAGTGGAAATGTTGAACTAAATTTAGC	57.871	33.333	22.45	9.87	34.09	3.09
4841	5529	8.912988	TCAGAGTGGAAATGTTGAACTAAATTT	58.087	29.630	0.00	0.00	0.00	1.82
4842	5530	8.463930	TCAGAGTGGAAATGTTGAACTAAATT	57.536	30.769	0.00	0.00	0.00	1.82
4843	5531	8.641498	ATCAGAGTGGAAATGTTGAACTAAAT	57.359	30.769	0.00	0.00	0.00	1.40
4844	5532	7.719193	TGATCAGAGTGGAAATGTTGAACTAAA	59.281	33.333	0.00	0.00	0.00	1.85
4845	5533	7.223584	TGATCAGAGTGGAAATGTTGAACTAA	58.776	34.615	0.00	0.00	0.00	2.24
4846	5534	6.768483	TGATCAGAGTGGAAATGTTGAACTA	58.232	36.000	0.00	0.00	0.00	2.24
4847	5535	5.624159	TGATCAGAGTGGAAATGTTGAACT	58.376	37.500	0.00	0.00	0.00	3.01
4848	5536	5.947228	TGATCAGAGTGGAAATGTTGAAC	57.053	39.130	0.00	0.00	0.00	3.18
4849	5537	5.048504	GCTTGATCAGAGTGGAAATGTTGAA	60.049	40.000	0.00	0.00	0.00	2.69
4850	5538	4.456911	GCTTGATCAGAGTGGAAATGTTGA	59.543	41.667	0.00	0.00	0.00	3.18
4851	5539	4.380233	GGCTTGATCAGAGTGGAAATGTTG	60.380	45.833	0.00	0.00	0.00	3.33
4852	5540	3.760684	GGCTTGATCAGAGTGGAAATGTT	59.239	43.478	0.00	0.00	0.00	2.71
4853	5541	3.245016	TGGCTTGATCAGAGTGGAAATGT	60.245	43.478	0.00	0.00	0.00	2.71
4854	5542	3.349927	TGGCTTGATCAGAGTGGAAATG	58.650	45.455	0.00	0.00	0.00	2.32
4855	5543	3.726557	TGGCTTGATCAGAGTGGAAAT	57.273	42.857	0.00	0.00	0.00	2.17
4856	5544	3.349927	CATGGCTTGATCAGAGTGGAAA	58.650	45.455	0.00	0.00	0.00	3.13
4857	5545	2.356432	CCATGGCTTGATCAGAGTGGAA	60.356	50.000	0.00	0.00	0.00	3.53
4858	5546	1.211212	CCATGGCTTGATCAGAGTGGA	59.789	52.381	0.00	0.00	0.00	4.02
4859	5547	1.064906	ACCATGGCTTGATCAGAGTGG	60.065	52.381	13.04	4.53	0.00	4.00
4969	5658	4.867047	CAGTCACTACCAACAATAGAGCTG	59.133	45.833	0.00	0.00	0.00	4.24
4984	8153	3.557054	GGAGTCCATGTTTGCAGTCACTA	60.557	47.826	3.60	0.00	0.00	2.74
5084	8253	7.721402	AGTAGAACTCATAATGCTCACCTAAG	58.279	38.462	0.00	0.00	0.00	2.18
5131	8300	8.198109	TCTAAGATAGAAACAATCTGTAGCACC	58.802	37.037	0.00	0.00	39.30	5.01
5137	8306	8.535335	TCTTGCTCTAAGATAGAAACAATCTGT	58.465	33.333	0.00	0.00	40.43	3.41
5152	8321	5.125097	ACATGATTTGGCTTCTTGCTCTAAG	59.875	40.000	0.00	0.00	42.39	2.18
5177	8346	9.833894	CAAGTTTTTCAAGATTTACAATGAACG	57.166	29.630	0.00	0.00	31.96	3.95
5285	8465	1.538687	GCTGCAGTGGAAGGGCAAAT	61.539	55.000	16.64	0.00	37.06	2.32
5292	8473	3.011818	TGACATATTGCTGCAGTGGAAG	58.988	45.455	16.64	4.22	0.00	3.46
5294	8475	2.785540	TGACATATTGCTGCAGTGGA	57.214	45.000	16.64	1.70	0.00	4.02
5296	8477	4.895224	AGATTGACATATTGCTGCAGTG	57.105	40.909	16.64	7.68	0.00	3.66
5297	8478	4.703575	ACAAGATTGACATATTGCTGCAGT	59.296	37.500	16.64	1.92	35.34	4.40
5298	8479	5.034797	CACAAGATTGACATATTGCTGCAG	58.965	41.667	10.11	10.11	35.34	4.41
5300	8481	4.990257	ACACAAGATTGACATATTGCTGC	58.010	39.130	0.00	0.00	35.34	5.25
5313	8498	8.186709	AGGAATCAATTCAAGAACACAAGATT	57.813	30.769	5.19	0.00	38.53	2.40
5314	8499	7.449395	TGAGGAATCAATTCAAGAACACAAGAT	59.551	33.333	5.19	0.00	38.53	2.40
5316	8501	6.973843	TGAGGAATCAATTCAAGAACACAAG	58.026	36.000	5.19	0.00	38.53	3.16
5318	8503	7.528996	AATGAGGAATCAATTCAAGAACACA	57.471	32.000	5.19	0.00	38.53	3.72
5319	8504	8.084073	TGAAATGAGGAATCAATTCAAGAACAC	58.916	33.333	6.33	0.00	36.81	3.32
5320	8505	8.180706	TGAAATGAGGAATCAATTCAAGAACA	57.819	30.769	6.33	0.00	36.81	3.18
5388	8583	1.047002	TTGGACAAACAATGCCCAGG	58.953	50.000	0.00	0.00	43.03	4.45
5407	8602	6.601217	GCCATCTCTTCTCTTTTGAAGGTTAT	59.399	38.462	4.71	0.00	42.54	1.89
5409	8604	4.764308	GCCATCTCTTCTCTTTTGAAGGTT	59.236	41.667	4.71	0.00	42.54	3.50
5558	8893	2.580322	TCCCACTTTGGATCCATAGCAA	59.420	45.455	26.67	13.19	40.96	3.91
5604	8944	2.583024	TCCATGTCATGCTTTGTCCA	57.417	45.000	7.35	0.00	0.00	4.02
5781	9129	8.734386	CCTGATTAACTGCTGGGATTAATTATC	58.266	37.037	0.00	0.00	30.50	1.75
5782	9130	7.671398	CCCTGATTAACTGCTGGGATTAATTAT	59.329	37.037	9.77	0.00	43.70	1.28
5783	9131	7.004086	CCCTGATTAACTGCTGGGATTAATTA	58.996	38.462	9.77	0.00	43.70	1.40
5784	9132	5.835280	CCCTGATTAACTGCTGGGATTAATT	59.165	40.000	9.77	0.00	43.70	1.40
5785	9133	5.134339	TCCCTGATTAACTGCTGGGATTAAT	59.866	40.000	12.58	0.00	44.37	1.40
5786	9134	4.476846	TCCCTGATTAACTGCTGGGATTAA	59.523	41.667	12.58	0.00	44.37	1.40
5787	9135	4.044308	TCCCTGATTAACTGCTGGGATTA	58.956	43.478	12.58	0.00	44.37	1.75
5788	9136	2.852449	TCCCTGATTAACTGCTGGGATT	59.148	45.455	12.58	0.00	44.37	3.01
5789	9137	2.492025	TCCCTGATTAACTGCTGGGAT	58.508	47.619	12.58	0.00	44.37	3.85
5790	9138	1.965414	TCCCTGATTAACTGCTGGGA	58.035	50.000	12.58	12.58	46.23	4.37
5791	9139	2.806945	TTCCCTGATTAACTGCTGGG	57.193	50.000	9.29	9.29	42.71	4.45
5792	9140	3.633986	GGATTTCCCTGATTAACTGCTGG	59.366	47.826	0.00	0.00	0.00	4.85
5793	9141	4.907879	GGATTTCCCTGATTAACTGCTG	57.092	45.455	0.00	0.00	0.00	4.41
5808	9156	0.330267	TGAGGGGAAACGGGGATTTC	59.670	55.000	0.00	0.00	37.78	2.17
5809	9157	0.039180	GTGAGGGGAAACGGGGATTT	59.961	55.000	0.00	0.00	0.00	2.17
5810	9158	1.689412	GTGAGGGGAAACGGGGATT	59.311	57.895	0.00	0.00	0.00	3.01
5811	9159	2.306384	GGTGAGGGGAAACGGGGAT	61.306	63.158	0.00	0.00	0.00	3.85
5812	9160	2.931649	GGTGAGGGGAAACGGGGA	60.932	66.667	0.00	0.00	0.00	4.81
5813	9161	2.933834	AGGTGAGGGGAAACGGGG	60.934	66.667	0.00	0.00	0.00	5.73
5814	9162	2.351276	CAGGTGAGGGGAAACGGG	59.649	66.667	0.00	0.00	0.00	5.28
5815	9163	2.359975	GCAGGTGAGGGGAAACGG	60.360	66.667	0.00	0.00	0.00	4.44
5816	9164	2.742372	CGCAGGTGAGGGGAAACG	60.742	66.667	0.00	0.00	0.00	3.60
5831	9179	2.844451	TTGCTGGAGTTGCAACCGC	61.844	57.895	25.62	21.24	44.24	5.68
5832	9180	3.431055	TTGCTGGAGTTGCAACCG	58.569	55.556	25.62	12.80	44.24	4.44
5835	9183	1.737355	GCTGGTTGCTGGAGTTGCAA	61.737	55.000	0.00	0.00	46.48	4.08
5836	9184	2.195567	GCTGGTTGCTGGAGTTGCA	61.196	57.895	0.00	0.00	38.95	4.08
5837	9185	2.647297	GCTGGTTGCTGGAGTTGC	59.353	61.111	0.00	0.00	38.95	4.17
5838	9186	1.893808	ACGCTGGTTGCTGGAGTTG	60.894	57.895	0.00	0.00	40.11	3.16
5839	9187	1.893808	CACGCTGGTTGCTGGAGTT	60.894	57.895	0.00	0.00	40.11	3.01
5840	9188	2.281070	CACGCTGGTTGCTGGAGT	60.281	61.111	0.00	0.00	40.11	3.85
5841	9189	2.031012	TCACGCTGGTTGCTGGAG	59.969	61.111	0.00	0.00	40.11	3.86
5842	9190	2.280797	GTCACGCTGGTTGCTGGA	60.281	61.111	0.00	0.00	40.11	3.86
5843	9191	2.591429	TGTCACGCTGGTTGCTGG	60.591	61.111	0.00	0.00	40.11	4.85
5844	9192	1.439353	AACTGTCACGCTGGTTGCTG	61.439	55.000	0.00	0.00	40.11	4.41
5845	9193	1.153168	AACTGTCACGCTGGTTGCT	60.153	52.632	0.00	0.00	40.11	3.91
5846	9194	1.279840	GAACTGTCACGCTGGTTGC	59.720	57.895	0.00	0.00	38.57	4.17
5847	9195	0.304705	GTGAACTGTCACGCTGGTTG	59.695	55.000	0.00	0.00	44.58	3.77
5848	9196	2.690326	GTGAACTGTCACGCTGGTT	58.310	52.632	0.00	0.00	44.58	3.67
5849	9197	4.438346	GTGAACTGTCACGCTGGT	57.562	55.556	0.00	0.00	44.58	4.00
5856	9204	2.503765	TGGAAGGAACTGTGAACTGTCA	59.496	45.455	0.00	0.00	40.86	3.58
5857	9205	3.194005	TGGAAGGAACTGTGAACTGTC	57.806	47.619	0.00	0.00	40.86	3.51
5858	9206	3.496870	GGATGGAAGGAACTGTGAACTGT	60.497	47.826	0.00	0.00	40.86	3.55
5859	9207	3.077359	GGATGGAAGGAACTGTGAACTG	58.923	50.000	0.00	0.00	40.86	3.16
5860	9208	2.040412	GGGATGGAAGGAACTGTGAACT	59.960	50.000	0.00	0.00	40.86	3.01
5861	9209	2.040412	AGGGATGGAAGGAACTGTGAAC	59.960	50.000	0.00	0.00	40.86	3.18
5862	9210	2.348472	AGGGATGGAAGGAACTGTGAA	58.652	47.619	0.00	0.00	40.86	3.18
5863	9211	2.044793	AGGGATGGAAGGAACTGTGA	57.955	50.000	0.00	0.00	40.86	3.58
5864	9212	2.418746	CGTAGGGATGGAAGGAACTGTG	60.419	54.545	0.00	0.00	40.86	3.66
5865	9213	1.831736	CGTAGGGATGGAAGGAACTGT	59.168	52.381	0.00	0.00	40.86	3.55
5866	9214	1.473434	GCGTAGGGATGGAAGGAACTG	60.473	57.143	0.00	0.00	40.86	3.16
5868	9216	0.539986	TGCGTAGGGATGGAAGGAAC	59.460	55.000	0.00	0.00	0.00	3.62
5869	9217	1.416401	GATGCGTAGGGATGGAAGGAA	59.584	52.381	0.00	0.00	0.00	3.36
5870	9218	1.048601	GATGCGTAGGGATGGAAGGA	58.951	55.000	0.00	0.00	0.00	3.36
5871	9219	1.001406	GAGATGCGTAGGGATGGAAGG	59.999	57.143	0.00	0.00	0.00	3.46
5872	9220	1.688735	TGAGATGCGTAGGGATGGAAG	59.311	52.381	0.00	0.00	0.00	3.46
5873	9221	1.688735	CTGAGATGCGTAGGGATGGAA	59.311	52.381	0.00	0.00	0.00	3.53
5874	9222	1.332195	CTGAGATGCGTAGGGATGGA	58.668	55.000	0.00	0.00	0.00	3.41
5875	9223	0.319728	CCTGAGATGCGTAGGGATGG	59.680	60.000	0.00	0.00	0.00	3.51
5876	9224	1.271934	CTCCTGAGATGCGTAGGGATG	59.728	57.143	0.00	0.00	32.39	3.51
5877	9225	1.626686	CTCCTGAGATGCGTAGGGAT	58.373	55.000	0.00	0.00	32.39	3.85
5878	9226	0.468214	CCTCCTGAGATGCGTAGGGA	60.468	60.000	0.00	0.00	32.39	4.20
5879	9227	2.045280	CCTCCTGAGATGCGTAGGG	58.955	63.158	0.00	0.00	32.39	3.53
5880	9228	1.365633	GCCTCCTGAGATGCGTAGG	59.634	63.158	0.00	0.00	0.00	3.18
5885	9233	3.859414	AGGCGCCTCCTGAGATGC	61.859	66.667	27.08	0.00	45.54	3.91
5893	9241	2.436824	GGTTGAAGAGGCGCCTCC	60.437	66.667	44.91	33.10	43.70	4.30
5894	9242	1.003233	AAGGTTGAAGAGGCGCCTC	60.003	57.895	43.08	43.08	43.03	4.70
5895	9243	1.302832	CAAGGTTGAAGAGGCGCCT	60.303	57.895	33.48	33.48	0.00	5.52
5896	9244	0.321298	TACAAGGTTGAAGAGGCGCC	60.321	55.000	21.89	21.89	0.00	6.53
5897	9245	1.739067	ATACAAGGTTGAAGAGGCGC	58.261	50.000	0.00	0.00	0.00	6.53
5898	9246	7.116948	CAGATTATATACAAGGTTGAAGAGGCG	59.883	40.741	0.00	0.00	0.00	5.52
5899	9247	7.934120	ACAGATTATATACAAGGTTGAAGAGGC	59.066	37.037	0.00	0.00	0.00	4.70
5900	9248	9.265901	CACAGATTATATACAAGGTTGAAGAGG	57.734	37.037	0.00	0.00	0.00	3.69
5919	9267	8.411683	GCCTTTATTGATCATCTTTCACAGATT	58.588	33.333	0.00	0.00	40.67	2.40
5920	9268	7.778853	AGCCTTTATTGATCATCTTTCACAGAT	59.221	33.333	0.00	0.00	43.80	2.90
5921	9269	7.114754	AGCCTTTATTGATCATCTTTCACAGA	58.885	34.615	0.00	0.00	35.33	3.41
5922	9270	7.330900	AGCCTTTATTGATCATCTTTCACAG	57.669	36.000	0.00	0.00	0.00	3.66
5923	9271	7.828717	TGTAGCCTTTATTGATCATCTTTCACA	59.171	33.333	0.00	0.00	0.00	3.58
5924	9272	8.125448	GTGTAGCCTTTATTGATCATCTTTCAC	58.875	37.037	0.00	0.00	0.00	3.18
5925	9273	7.828717	TGTGTAGCCTTTATTGATCATCTTTCA	59.171	33.333	0.00	0.00	0.00	2.69
5926	9274	8.213518	TGTGTAGCCTTTATTGATCATCTTTC	57.786	34.615	0.00	0.00	0.00	2.62
5927	9275	8.627403	CATGTGTAGCCTTTATTGATCATCTTT	58.373	33.333	0.00	0.00	0.00	2.52
5928	9276	7.776969	ACATGTGTAGCCTTTATTGATCATCTT	59.223	33.333	0.00	0.00	0.00	2.40
5929	9277	7.285566	ACATGTGTAGCCTTTATTGATCATCT	58.714	34.615	0.00	0.00	0.00	2.90
5930	9278	7.502120	ACATGTGTAGCCTTTATTGATCATC	57.498	36.000	0.00	0.00	0.00	2.92
5931	9279	7.557358	TGAACATGTGTAGCCTTTATTGATCAT	59.443	33.333	0.00	0.00	0.00	2.45
5932	9280	6.883756	TGAACATGTGTAGCCTTTATTGATCA	59.116	34.615	0.00	0.00	0.00	2.92
5933	9281	7.320443	TGAACATGTGTAGCCTTTATTGATC	57.680	36.000	0.00	0.00	0.00	2.92
5934	9282	7.886629	ATGAACATGTGTAGCCTTTATTGAT	57.113	32.000	0.00	0.00	0.00	2.57
5935	9283	7.611467	AGAATGAACATGTGTAGCCTTTATTGA	59.389	33.333	0.00	0.00	0.00	2.57
5936	9284	7.765307	AGAATGAACATGTGTAGCCTTTATTG	58.235	34.615	0.00	0.00	0.00	1.90
5937	9285	7.944729	AGAATGAACATGTGTAGCCTTTATT	57.055	32.000	0.00	0.00	0.00	1.40
5938	9286	9.632638	AATAGAATGAACATGTGTAGCCTTTAT	57.367	29.630	0.00	0.00	0.00	1.40
5939	9287	9.461312	AAATAGAATGAACATGTGTAGCCTTTA	57.539	29.630	0.00	0.00	0.00	1.85
5940	9288	7.944729	AATAGAATGAACATGTGTAGCCTTT	57.055	32.000	0.00	0.00	0.00	3.11
5941	9289	7.394359	ACAAATAGAATGAACATGTGTAGCCTT	59.606	33.333	0.00	0.00	0.00	4.35
5942	9290	6.886459	ACAAATAGAATGAACATGTGTAGCCT	59.114	34.615	0.00	0.00	0.00	4.58
5943	9291	7.088589	ACAAATAGAATGAACATGTGTAGCC	57.911	36.000	0.00	0.00	0.00	3.93
5944	9292	8.970691	AAACAAATAGAATGAACATGTGTAGC	57.029	30.769	0.00	0.00	0.00	3.58
5947	9295	9.071276	AGAGAAACAAATAGAATGAACATGTGT	57.929	29.630	0.00	0.00	0.00	3.72
5948	9296	9.552114	GAGAGAAACAAATAGAATGAACATGTG	57.448	33.333	0.00	0.00	0.00	3.21
5949	9297	9.512588	AGAGAGAAACAAATAGAATGAACATGT	57.487	29.630	0.00	0.00	0.00	3.21
5950	9298	9.985318	GAGAGAGAAACAAATAGAATGAACATG	57.015	33.333	0.00	0.00	0.00	3.21
5951	9299	8.877779	CGAGAGAGAAACAAATAGAATGAACAT	58.122	33.333	0.00	0.00	0.00	2.71
5952	9300	7.148573	GCGAGAGAGAAACAAATAGAATGAACA	60.149	37.037	0.00	0.00	0.00	3.18
5953	9301	7.064016	AGCGAGAGAGAAACAAATAGAATGAAC	59.936	37.037	0.00	0.00	0.00	3.18
5954	9302	7.099764	AGCGAGAGAGAAACAAATAGAATGAA	58.900	34.615	0.00	0.00	0.00	2.57
5955	9303	6.634805	AGCGAGAGAGAAACAAATAGAATGA	58.365	36.000	0.00	0.00	0.00	2.57
5956	9304	6.900568	AGCGAGAGAGAAACAAATAGAATG	57.099	37.500	0.00	0.00	0.00	2.67
5957	9305	6.876257	ACAAGCGAGAGAGAAACAAATAGAAT	59.124	34.615	0.00	0.00	0.00	2.40
5958	9306	6.146184	CACAAGCGAGAGAGAAACAAATAGAA	59.854	38.462	0.00	0.00	0.00	2.10
5959	9307	5.635280	CACAAGCGAGAGAGAAACAAATAGA	59.365	40.000	0.00	0.00	0.00	1.98
5960	9308	5.406780	ACACAAGCGAGAGAGAAACAAATAG	59.593	40.000	0.00	0.00	0.00	1.73
5961	9309	5.297547	ACACAAGCGAGAGAGAAACAAATA	58.702	37.500	0.00	0.00	0.00	1.40
5962	9310	4.130118	ACACAAGCGAGAGAGAAACAAAT	58.870	39.130	0.00	0.00	0.00	2.32
5963	9311	3.531538	ACACAAGCGAGAGAGAAACAAA	58.468	40.909	0.00	0.00	0.00	2.83
5964	9312	3.123804	GACACAAGCGAGAGAGAAACAA	58.876	45.455	0.00	0.00	0.00	2.83
5965	9313	2.362397	AGACACAAGCGAGAGAGAAACA	59.638	45.455	0.00	0.00	0.00	2.83
5966	9314	3.019933	AGACACAAGCGAGAGAGAAAC	57.980	47.619	0.00	0.00	0.00	2.78
5967	9315	3.068165	TCAAGACACAAGCGAGAGAGAAA	59.932	43.478	0.00	0.00	0.00	2.52
5968	9316	2.623416	TCAAGACACAAGCGAGAGAGAA	59.377	45.455	0.00	0.00	0.00	2.87
5969	9317	2.230660	TCAAGACACAAGCGAGAGAGA	58.769	47.619	0.00	0.00	0.00	3.10
5970	9318	2.713895	TCAAGACACAAGCGAGAGAG	57.286	50.000	0.00	0.00	0.00	3.20
5971	9319	3.667497	AATCAAGACACAAGCGAGAGA	57.333	42.857	0.00	0.00	0.00	3.10
5972	9320	4.237724	TGTAATCAAGACACAAGCGAGAG	58.762	43.478	0.00	0.00	0.00	3.20
5973	9321	4.251543	TGTAATCAAGACACAAGCGAGA	57.748	40.909	0.00	0.00	0.00	4.04
5974	9322	5.536554	AATGTAATCAAGACACAAGCGAG	57.463	39.130	0.00	0.00	0.00	5.03
5975	9323	5.940192	AAATGTAATCAAGACACAAGCGA	57.060	34.783	0.00	0.00	0.00	4.93
5976	9324	7.075121	TGTTAAATGTAATCAAGACACAAGCG	58.925	34.615	0.00	0.00	0.00	4.68
5977	9325	8.289618	TCTGTTAAATGTAATCAAGACACAAGC	58.710	33.333	0.00	0.00	0.00	4.01
5998	9346	9.533253	CATTTCAAACCAAGAGTTATTTCTGTT	57.467	29.630	0.00	0.00	37.88	3.16
5999	9347	8.912988	TCATTTCAAACCAAGAGTTATTTCTGT	58.087	29.630	0.00	0.00	37.88	3.41
6000	9348	9.403110	CTCATTTCAAACCAAGAGTTATTTCTG	57.597	33.333	0.00	0.00	37.88	3.02
6001	9349	9.354673	TCTCATTTCAAACCAAGAGTTATTTCT	57.645	29.630	0.00	0.00	37.88	2.52
6002	9350	9.399403	GTCTCATTTCAAACCAAGAGTTATTTC	57.601	33.333	0.00	0.00	37.88	2.17
6045	9393	8.283291	GGCTTGCTGTCTAAATAACATGTATAC	58.717	37.037	0.00	0.00	0.00	1.47
6053	9401	4.261801	TGGAGGCTTGCTGTCTAAATAAC	58.738	43.478	0.00	0.00	0.00	1.89
6059	9407	3.439857	AAAATGGAGGCTTGCTGTCTA	57.560	42.857	0.00	0.00	0.00	2.59
6060	9408	2.299326	AAAATGGAGGCTTGCTGTCT	57.701	45.000	0.00	0.00	0.00	3.41
6061	9409	4.725790	ATAAAAATGGAGGCTTGCTGTC	57.274	40.909	0.00	0.00	0.00	3.51
6063	9411	4.824289	ACAATAAAAATGGAGGCTTGCTG	58.176	39.130	0.00	0.00	0.00	4.41
6074	9426	6.405842	GGGGCCTTCTGTCTACAATAAAAATG	60.406	42.308	0.84	0.00	0.00	2.32
6078	9430	3.053917	GGGGGCCTTCTGTCTACAATAAA	60.054	47.826	0.84	0.00	0.00	1.40
6086	9438	0.551131	AGAATGGGGGCCTTCTGTCT	60.551	55.000	0.84	0.00	30.68	3.41

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.