Multiple sequence alignment - TraesCS2A01G234200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G234200 chr2A 100.000 4197 0 0 4474 8670 281113960 281118156 0.000000e+00 7751.0
1 TraesCS2A01G234200 chr2A 100.000 4053 0 0 1 4053 281109487 281113539 0.000000e+00 7485.0
2 TraesCS2A01G234200 chr2A 96.591 176 6 0 8495 8670 746961536 746961711 8.510000e-75 292.0
3 TraesCS2A01G234200 chr2A 96.591 88 3 0 3933 4020 281113373 281113460 7.010000e-31 147.0
4 TraesCS2A01G234200 chr2A 96.591 88 3 0 3887 3974 281113419 281113506 7.010000e-31 147.0
5 TraesCS2A01G234200 chr2A 86.290 124 16 1 4499 4622 105489375 105489497 5.460000e-27 134.0
6 TraesCS2A01G234200 chr2A 83.908 87 7 4 3898 3978 4413282 4413367 9.330000e-10 76.8
7 TraesCS2A01G234200 chr2A 85.714 70 9 1 5531 5600 543299140 543299072 1.210000e-08 73.1
8 TraesCS2A01G234200 chr2A 81.319 91 10 4 3946 4030 4413284 4413373 5.620000e-07 67.6
9 TraesCS2A01G234200 chr2A 92.857 42 3 0 3979 4020 281113373 281113414 2.610000e-05 62.1
10 TraesCS2A01G234200 chr2D 97.175 3221 60 18 855 4053 241690843 241687632 0.000000e+00 5415.0
11 TraesCS2A01G234200 chr2D 98.174 2902 40 5 5102 7998 241686874 241683981 0.000000e+00 5053.0
12 TraesCS2A01G234200 chr2D 96.038 631 23 2 4474 5102 241687574 241686944 0.000000e+00 1026.0
13 TraesCS2A01G234200 chr2D 96.429 392 13 1 8098 8489 241666623 241666233 0.000000e+00 645.0
14 TraesCS2A01G234200 chr2D 96.812 345 10 1 3238 3581 295166351 295166007 7.550000e-160 575.0
15 TraesCS2A01G234200 chr2D 96.812 345 10 1 3238 3581 402239429 402239085 7.550000e-160 575.0
16 TraesCS2A01G234200 chr2D 97.101 138 2 2 101 236 241690976 241690839 1.880000e-56 231.0
17 TraesCS2A01G234200 chr2D 83.920 199 12 12 3016 3198 81388176 81388370 1.160000e-38 172.0
18 TraesCS2A01G234200 chr2D 93.407 91 6 0 3887 3977 241687752 241687662 1.520000e-27 135.0
19 TraesCS2A01G234200 chr2D 92.424 66 4 1 3016 3081 307028310 307028374 9.270000e-15 93.5
20 TraesCS2A01G234200 chr2D 93.333 45 3 0 3887 3931 241687706 241687662 5.620000e-07 67.6
21 TraesCS2A01G234200 chr2B 96.327 3022 69 13 5102 8103 320743444 320746443 0.000000e+00 4927.0
22 TraesCS2A01G234200 chr2B 95.472 2385 83 14 853 3220 320738979 320741355 0.000000e+00 3783.0
23 TraesCS2A01G234200 chr2B 95.545 404 15 1 3653 4053 320741385 320741788 2.040000e-180 643.0
24 TraesCS2A01G234200 chr2B 93.333 420 27 1 4507 4926 320742212 320742630 3.440000e-173 619.0
25 TraesCS2A01G234200 chr2B 92.084 379 25 3 8106 8484 320748329 320748702 5.960000e-146 529.0
26 TraesCS2A01G234200 chr2B 95.676 185 6 1 4918 5102 320743192 320743374 6.580000e-76 296.0
27 TraesCS2A01G234200 chr2B 92.500 120 2 2 115 233 320738867 320738980 1.940000e-36 165.0
28 TraesCS2A01G234200 chr2B 93.182 88 6 0 3887 3974 320741668 320741755 7.060000e-26 130.0
29 TraesCS2A01G234200 chr2B 90.426 94 6 1 3933 4023 320741619 320741712 4.250000e-23 121.0
30 TraesCS2A01G234200 chr2B 80.128 156 16 2 3887 4027 5556386 5556541 1.540000e-17 102.0
31 TraesCS2A01G234200 chr2B 92.857 70 4 1 8042 8111 320746588 320746656 5.540000e-17 100.0
32 TraesCS2A01G234200 chr2B 86.022 93 13 0 255 347 774368663 774368755 5.540000e-17 100.0
33 TraesCS2A01G234200 chr2B 90.476 63 6 0 3968 4030 5556375 5556437 5.580000e-12 84.2
34 TraesCS2A01G234200 chr2B 94.340 53 3 0 3922 3974 5556375 5556427 2.010000e-11 82.4
35 TraesCS2A01G234200 chr2B 88.889 72 1 1 3581 3652 320741340 320741404 2.010000e-11 82.4
36 TraesCS2A01G234200 chr2B 86.957 69 8 1 5531 5599 543300424 543300357 9.330000e-10 76.8
37 TraesCS2A01G234200 chr2B 85.714 70 9 1 5527 5595 210421316 210421247 1.210000e-08 73.1
38 TraesCS2A01G234200 chr2B 89.655 58 3 1 3979 4036 320741619 320741673 4.340000e-08 71.3
39 TraesCS2A01G234200 chr2B 92.857 42 3 0 3887 3928 320741714 320741755 2.610000e-05 62.1
40 TraesCS2A01G234200 chr6A 90.253 513 34 7 7478 7977 194795143 194794634 0.000000e+00 656.0
41 TraesCS2A01G234200 chr6A 86.395 147 15 3 237 378 35568758 35568904 1.170000e-33 156.0
42 TraesCS2A01G234200 chr6A 89.583 96 8 2 307 401 68651706 68651800 4.250000e-23 121.0
43 TraesCS2A01G234200 chr6A 80.583 103 15 5 2881 2981 601863474 601863573 3.360000e-09 75.0
44 TraesCS2A01G234200 chr7A 97.110 346 9 1 3237 3581 465760870 465761215 4.510000e-162 582.0
45 TraesCS2A01G234200 chr7A 97.076 171 4 1 8500 8670 729950076 729950245 3.960000e-73 287.0
46 TraesCS2A01G234200 chr7A 85.714 70 9 1 5527 5595 94931182 94931251 1.210000e-08 73.1
47 TraesCS2A01G234200 chr1B 97.110 346 9 1 3237 3581 478710523 478710868 4.510000e-162 582.0
48 TraesCS2A01G234200 chr1B 86.387 191 10 6 3016 3193 24495235 24495422 2.470000e-45 195.0
49 TraesCS2A01G234200 chr1B 83.333 90 13 2 672 760 200649122 200649210 2.010000e-11 82.4
50 TraesCS2A01G234200 chr5B 96.821 346 10 1 3237 3581 222365776 222365431 2.100000e-160 577.0
51 TraesCS2A01G234200 chr5B 96.023 176 7 0 8495 8670 591559006 591558831 3.960000e-73 287.0
52 TraesCS2A01G234200 chr5B 83.908 87 12 2 675 760 486034056 486033971 2.010000e-11 82.4
53 TraesCS2A01G234200 chr3B 96.821 346 10 1 3237 3581 39816287 39815942 2.100000e-160 577.0
54 TraesCS2A01G234200 chr3B 93.750 176 11 0 8495 8670 373135957 373136132 1.860000e-66 265.0
55 TraesCS2A01G234200 chr3B 85.644 202 12 7 3015 3201 650613245 650613046 6.870000e-46 196.0
56 TraesCS2A01G234200 chr3B 84.236 203 15 9 3014 3201 404693479 404693279 1.920000e-41 182.0
57 TraesCS2A01G234200 chr3B 93.258 89 5 1 313 401 5484801 5484888 7.060000e-26 130.0
58 TraesCS2A01G234200 chr3B 85.526 76 9 2 5521 5595 602741899 602741973 2.590000e-10 78.7
59 TraesCS2A01G234200 chr7D 96.542 347 11 1 3238 3583 429475523 429475869 2.710000e-159 573.0
60 TraesCS2A01G234200 chr7D 83.186 226 16 5 3016 3220 121801587 121801811 4.130000e-43 187.0
61 TraesCS2A01G234200 chr7D 82.609 92 12 4 2893 2981 117545356 117545266 2.590000e-10 78.7
62 TraesCS2A01G234200 chr7D 87.324 71 6 1 3906 3973 121802078 121802148 2.590000e-10 78.7
63 TraesCS2A01G234200 chr7D 85.915 71 7 1 3952 4019 121802078 121802148 1.210000e-08 73.1
64 TraesCS2A01G234200 chr6B 93.734 383 18 6 3237 3614 425607256 425606875 3.510000e-158 569.0
65 TraesCS2A01G234200 chr6B 96.023 176 7 0 8495 8670 692642736 692642561 3.960000e-73 287.0
66 TraesCS2A01G234200 chr6B 82.955 88 8 6 2892 2975 527358243 527358327 1.210000e-08 73.1
67 TraesCS2A01G234200 chr6B 80.198 101 9 5 684 784 65004710 65004621 2.020000e-06 65.8
68 TraesCS2A01G234200 chr6D 79.130 575 65 25 255 813 66632137 66631602 6.440000e-91 346.0
69 TraesCS2A01G234200 chr6D 78.087 575 70 25 255 813 66267151 66266617 6.530000e-81 313.0
70 TraesCS2A01G234200 chr6D 84.896 192 12 6 3015 3193 453582566 453582753 2.490000e-40 178.0
71 TraesCS2A01G234200 chr7B 80.079 507 56 27 255 750 261029885 261029413 1.390000e-87 335.0
72 TraesCS2A01G234200 chr7B 89.381 113 12 0 307 419 750125529 750125641 9.070000e-30 143.0
73 TraesCS2A01G234200 chr7B 83.908 87 12 2 675 760 633320149 633320064 2.010000e-11 82.4
74 TraesCS2A01G234200 chr4A 94.886 176 9 0 8495 8670 706881542 706881367 8.570000e-70 276.0
75 TraesCS2A01G234200 chr4A 84.259 108 17 0 240 347 29017252 29017145 1.190000e-18 106.0
76 TraesCS2A01G234200 chr4A 80.000 125 22 3 2891 3013 7164633 7164510 1.200000e-13 89.8
77 TraesCS2A01G234200 chr4A 83.908 87 12 2 675 760 725273529 725273444 2.010000e-11 82.4
78 TraesCS2A01G234200 chr4A 81.188 101 12 5 2885 2981 570274694 570274597 3.360000e-09 75.0
79 TraesCS2A01G234200 chr4D 94.318 176 10 0 8495 8670 235505161 235505336 3.990000e-68 270.0
80 TraesCS2A01G234200 chr4D 84.492 187 14 6 3016 3189 333063090 333063274 4.160000e-38 171.0
81 TraesCS2A01G234200 chr4D 89.516 124 13 0 255 378 418536418 418536295 3.240000e-34 158.0
82 TraesCS2A01G234200 chr4D 79.464 112 12 5 684 795 488687589 488687489 1.560000e-07 69.4
83 TraesCS2A01G234200 chr5A 76.857 579 67 38 255 813 468139487 468140018 1.860000e-66 265.0
84 TraesCS2A01G234200 chr5A 87.097 93 10 2 256 347 313581218 313581309 4.280000e-18 104.0
85 TraesCS2A01G234200 chr5A 78.621 145 26 3 674 813 343767301 343767157 3.330000e-14 91.6
86 TraesCS2A01G234200 chr5A 86.765 68 7 2 5532 5599 693135057 693134992 3.360000e-09 75.0
87 TraesCS2A01G234200 chr5A 85.507 69 9 1 5532 5600 51741190 51741123 4.340000e-08 71.3
88 TraesCS2A01G234200 chr5A 100.000 34 0 0 2948 2981 548415182 548415215 7.270000e-06 63.9
89 TraesCS2A01G234200 chr1D 93.258 178 9 3 8495 8670 399321166 399320990 8.630000e-65 259.0
90 TraesCS2A01G234200 chr1D 93.220 177 10 2 8495 8670 399342459 399342284 8.630000e-65 259.0
91 TraesCS2A01G234200 chr4B 86.740 181 14 7 3016 3193 411522062 411522235 8.880000e-45 193.0
92 TraesCS2A01G234200 chr4B 85.227 88 6 6 2891 2974 577004932 577005016 5.580000e-12 84.2
93 TraesCS2A01G234200 chr3D 84.259 216 13 12 3009 3208 255447055 255446845 3.190000e-44 191.0
94 TraesCS2A01G234200 chr3D 84.817 191 13 6 3016 3193 393665479 393665666 2.490000e-40 178.0
95 TraesCS2A01G234200 chr3D 79.688 128 16 10 2893 3015 31955941 31956063 5.580000e-12 84.2
96 TraesCS2A01G234200 chr1A 81.771 192 19 13 3016 3193 426838652 426838841 7.010000e-31 147.0
97 TraesCS2A01G234200 chrUn 80.165 121 19 4 676 793 30411450 30411568 1.550000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G234200 chr2A 281109487 281118156 8669 False 3118.420000 7751 97.207800 1 8670 5 chr2A.!!$F4 8669
1 TraesCS2A01G234200 chr2D 241683981 241690976 6995 True 1987.933333 5415 95.871333 101 7998 6 chr2D.!!$R4 7897
2 TraesCS2A01G234200 chr2B 320738867 320748702 9835 False 886.830769 4927 92.984846 115 8484 13 chr2B.!!$F3 8369
3 TraesCS2A01G234200 chr6A 194794634 194795143 509 True 656.000000 656 90.253000 7478 7977 1 chr6A.!!$R1 499
4 TraesCS2A01G234200 chr6D 66631602 66632137 535 True 346.000000 346 79.130000 255 813 1 chr6D.!!$R2 558
5 TraesCS2A01G234200 chr6D 66266617 66267151 534 True 313.000000 313 78.087000 255 813 1 chr6D.!!$R1 558
6 TraesCS2A01G234200 chr5A 468139487 468140018 531 False 265.000000 265 76.857000 255 813 1 chr5A.!!$F2 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 238 0.033109 GCAAAAGCCCCCTCCATACT 60.033 55.000 0.00 0.00 0.00 2.12 F
853 900 0.323302 ACTCCACACACACACACACA 59.677 50.000 0.00 0.00 0.00 3.72 F
1254 1303 0.171455 AACTGTGAGGACGAGATCGC 59.829 55.000 1.39 0.00 44.43 4.58 F
1255 1304 1.297967 CTGTGAGGACGAGATCGCG 60.298 63.158 17.67 17.67 44.43 5.87 F
2016 2067 1.968493 ACGTGACCCACTGTTACAGAT 59.032 47.619 20.07 0.39 33.22 2.90 F
3220 3299 0.953727 TGGTTCACACAGCAAGCATC 59.046 50.000 0.00 0.00 0.00 3.91 F
4034 4117 0.687427 GAGGAGGAAGAGGAGCTGCT 60.687 60.000 7.79 7.79 0.00 4.24 F
5291 6032 0.958822 GCTTGGTTAGTGGTTGTGGG 59.041 55.000 0.00 0.00 0.00 4.61 F
6574 7321 0.036010 CGTCTGGCCTCAAATGGTCT 60.036 55.000 3.32 0.00 31.91 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1255 1304 1.153229 GGCCACCCAACGATCTACC 60.153 63.158 0.00 0.0 0.00 3.18 R
2690 2745 0.947180 CTGCCCAAATGCAAGCACAC 60.947 55.000 0.00 0.0 41.51 3.82 R
3219 3298 3.389329 GGCTTAAGATGGACATGGAGAGA 59.611 47.826 6.67 0.0 0.00 3.10 R
3220 3299 3.390639 AGGCTTAAGATGGACATGGAGAG 59.609 47.826 6.67 0.0 0.00 3.20 R
3936 4019 0.249073 CCTACTGGATCTGAACGCCG 60.249 60.000 0.00 0.0 34.57 6.46 R
4905 4988 0.250295 ACGTGGGATGTGTTGGACAG 60.250 55.000 0.00 0.0 38.23 3.51 R
6027 6774 1.661112 GCAAGCTAACTCGATGTGGAC 59.339 52.381 0.00 0.0 0.00 4.02 R
6670 7417 0.967380 GAAGCTTGTGGGGGTCATGG 60.967 60.000 2.10 0.0 0.00 3.66 R
8261 10905 0.171903 TAAGACGGCGTGCTTAGTCC 59.828 55.000 21.19 0.0 34.41 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 9.783425 GATTTTCAAGCTTGTATTTTCTTTTCG 57.217 29.630 25.19 0.00 0.00 3.46
91 92 8.696410 TTTTCAAGCTTGTATTTTCTTTTCGT 57.304 26.923 25.19 0.00 0.00 3.85
92 93 7.908193 TTCAAGCTTGTATTTTCTTTTCGTC 57.092 32.000 25.19 0.00 0.00 4.20
93 94 7.022055 TCAAGCTTGTATTTTCTTTTCGTCA 57.978 32.000 25.19 0.00 0.00 4.35
94 95 7.648142 TCAAGCTTGTATTTTCTTTTCGTCAT 58.352 30.769 25.19 0.00 0.00 3.06
95 96 8.134895 TCAAGCTTGTATTTTCTTTTCGTCATT 58.865 29.630 25.19 0.00 0.00 2.57
96 97 9.393249 CAAGCTTGTATTTTCTTTTCGTCATTA 57.607 29.630 18.65 0.00 0.00 1.90
97 98 9.959749 AAGCTTGTATTTTCTTTTCGTCATTAA 57.040 25.926 0.00 0.00 0.00 1.40
98 99 9.394477 AGCTTGTATTTTCTTTTCGTCATTAAC 57.606 29.630 0.00 0.00 0.00 2.01
99 100 9.394477 GCTTGTATTTTCTTTTCGTCATTAACT 57.606 29.630 0.00 0.00 0.00 2.24
183 184 2.771089 AGAAAATGAAGCAGCGACTCA 58.229 42.857 0.00 0.00 0.00 3.41
233 235 2.039462 GGCAAAAGCCCCCTCCAT 59.961 61.111 0.00 0.00 0.00 3.41
234 236 1.309688 GGCAAAAGCCCCCTCCATA 59.690 57.895 0.00 0.00 0.00 2.74
235 237 1.043116 GGCAAAAGCCCCCTCCATAC 61.043 60.000 0.00 0.00 0.00 2.39
236 238 0.033109 GCAAAAGCCCCCTCCATACT 60.033 55.000 0.00 0.00 0.00 2.12
237 239 1.214424 GCAAAAGCCCCCTCCATACTA 59.786 52.381 0.00 0.00 0.00 1.82
238 240 2.158460 GCAAAAGCCCCCTCCATACTAT 60.158 50.000 0.00 0.00 0.00 2.12
239 241 3.073946 GCAAAAGCCCCCTCCATACTATA 59.926 47.826 0.00 0.00 0.00 1.31
240 242 4.652822 CAAAAGCCCCCTCCATACTATAC 58.347 47.826 0.00 0.00 0.00 1.47
241 243 2.644060 AGCCCCCTCCATACTATACC 57.356 55.000 0.00 0.00 0.00 2.73
242 244 2.090864 AGCCCCCTCCATACTATACCT 58.909 52.381 0.00 0.00 0.00 3.08
243 245 2.188817 GCCCCCTCCATACTATACCTG 58.811 57.143 0.00 0.00 0.00 4.00
244 246 2.834113 CCCCCTCCATACTATACCTGG 58.166 57.143 0.00 0.00 0.00 4.45
245 247 2.188817 CCCCTCCATACTATACCTGGC 58.811 57.143 0.00 0.00 0.00 4.85
246 248 2.188817 CCCTCCATACTATACCTGGCC 58.811 57.143 0.00 0.00 0.00 5.36
247 249 2.494627 CCCTCCATACTATACCTGGCCA 60.495 54.545 4.71 4.71 0.00 5.36
248 250 3.248024 CCTCCATACTATACCTGGCCAA 58.752 50.000 7.01 0.00 0.00 4.52
249 251 3.650942 CCTCCATACTATACCTGGCCAAA 59.349 47.826 7.01 0.00 0.00 3.28
250 252 4.289672 CCTCCATACTATACCTGGCCAAAT 59.710 45.833 7.01 3.30 0.00 2.32
251 253 5.241403 TCCATACTATACCTGGCCAAATG 57.759 43.478 7.01 0.12 0.00 2.32
252 254 4.042809 TCCATACTATACCTGGCCAAATGG 59.957 45.833 7.01 7.56 38.53 3.16
253 255 4.335416 CATACTATACCTGGCCAAATGGG 58.665 47.826 7.01 7.12 40.85 4.00
294 296 1.735376 CGGCCAGGCACGTCTAGTAT 61.735 60.000 15.19 0.00 0.00 2.12
419 421 4.400109 GACACGAGCGACCGAGCA 62.400 66.667 3.95 0.00 40.15 4.26
436 438 1.631072 CAAGGTGCTCGTATTCGCG 59.369 57.895 0.00 0.00 36.96 5.87
441 443 4.035924 GCTCGTATTCGCGCTCGC 62.036 66.667 5.56 3.90 43.23 5.03
502 513 2.554032 GTTGTACTGCTGCAAATGGACT 59.446 45.455 3.02 0.00 0.00 3.85
528 544 3.737172 ACGCGCATGCAAAGGGTC 61.737 61.111 19.57 0.00 42.97 4.46
530 546 4.481112 GCGCATGCAAAGGGTCGG 62.481 66.667 19.57 0.00 42.15 4.79
609 633 1.824852 GAGACGCCCCCAATTTTCAAT 59.175 47.619 0.00 0.00 0.00 2.57
628 652 1.423794 TTTTGGACGCTCCCCTCCTT 61.424 55.000 2.23 0.00 35.03 3.36
630 654 3.839432 GGACGCTCCCCTCCTTCG 61.839 72.222 0.00 0.00 0.00 3.79
631 655 3.069318 GACGCTCCCCTCCTTCGT 61.069 66.667 0.00 0.00 35.98 3.85
632 656 2.603776 ACGCTCCCCTCCTTCGTT 60.604 61.111 0.00 0.00 0.00 3.85
633 657 2.184579 CGCTCCCCTCCTTCGTTC 59.815 66.667 0.00 0.00 0.00 3.95
634 658 2.352032 CGCTCCCCTCCTTCGTTCT 61.352 63.158 0.00 0.00 0.00 3.01
635 659 1.219393 GCTCCCCTCCTTCGTTCTG 59.781 63.158 0.00 0.00 0.00 3.02
639 670 3.181967 CCTCCTTCGTTCTGCGCG 61.182 66.667 0.00 0.00 41.07 6.86
640 671 2.430921 CTCCTTCGTTCTGCGCGT 60.431 61.111 8.43 0.00 41.07 6.01
645 676 4.617486 TCGTTCTGCGCGTCACGT 62.617 61.111 20.15 0.00 46.11 4.49
647 678 3.327754 GTTCTGCGCGTCACGTGT 61.328 61.111 16.51 0.00 46.11 4.49
648 679 2.583868 TTCTGCGCGTCACGTGTT 60.584 55.556 16.51 0.00 46.11 3.32
656 687 2.053116 GTCACGTGTTGCAGTGCG 60.053 61.111 16.51 0.00 38.19 5.34
836 883 2.664402 CCCATTTGGCCAGCTATACT 57.336 50.000 5.11 0.00 0.00 2.12
837 884 2.508526 CCCATTTGGCCAGCTATACTC 58.491 52.381 5.11 0.00 0.00 2.59
838 885 2.508526 CCATTTGGCCAGCTATACTCC 58.491 52.381 5.11 0.00 0.00 3.85
839 886 2.158623 CCATTTGGCCAGCTATACTCCA 60.159 50.000 5.11 0.00 0.00 3.86
840 887 2.710096 TTTGGCCAGCTATACTCCAC 57.290 50.000 5.11 0.00 0.00 4.02
841 888 1.578897 TTGGCCAGCTATACTCCACA 58.421 50.000 5.11 0.00 0.00 4.17
842 889 0.830648 TGGCCAGCTATACTCCACAC 59.169 55.000 0.00 0.00 0.00 3.82
843 890 0.830648 GGCCAGCTATACTCCACACA 59.169 55.000 0.00 0.00 0.00 3.72
844 891 1.473434 GGCCAGCTATACTCCACACAC 60.473 57.143 0.00 0.00 0.00 3.82
845 892 1.207089 GCCAGCTATACTCCACACACA 59.793 52.381 0.00 0.00 0.00 3.72
846 893 2.893637 CCAGCTATACTCCACACACAC 58.106 52.381 0.00 0.00 0.00 3.82
847 894 2.233676 CCAGCTATACTCCACACACACA 59.766 50.000 0.00 0.00 0.00 3.72
848 895 3.254060 CAGCTATACTCCACACACACAC 58.746 50.000 0.00 0.00 0.00 3.82
849 896 2.897326 AGCTATACTCCACACACACACA 59.103 45.455 0.00 0.00 0.00 3.72
850 897 2.993899 GCTATACTCCACACACACACAC 59.006 50.000 0.00 0.00 0.00 3.82
851 898 3.554129 GCTATACTCCACACACACACACA 60.554 47.826 0.00 0.00 0.00 3.72
852 899 2.303163 TACTCCACACACACACACAC 57.697 50.000 0.00 0.00 0.00 3.82
853 900 0.323302 ACTCCACACACACACACACA 59.677 50.000 0.00 0.00 0.00 3.72
1131 1180 2.813754 TCTGCCTGTTGTCTGTAAATGC 59.186 45.455 0.00 0.00 0.00 3.56
1132 1181 2.553602 CTGCCTGTTGTCTGTAAATGCA 59.446 45.455 0.00 0.00 0.00 3.96
1137 1186 4.925054 CCTGTTGTCTGTAAATGCAAATGG 59.075 41.667 0.00 0.00 0.00 3.16
1160 1209 0.606604 TGTAAACGGAGAGAGTGGCC 59.393 55.000 0.00 0.00 0.00 5.36
1254 1303 0.171455 AACTGTGAGGACGAGATCGC 59.829 55.000 1.39 0.00 44.43 4.58
1255 1304 1.297967 CTGTGAGGACGAGATCGCG 60.298 63.158 17.67 17.67 44.43 5.87
1405 1454 2.762535 TTTCAATCGTGGAGGGAGAC 57.237 50.000 0.00 0.00 0.00 3.36
1414 1463 3.581332 TCGTGGAGGGAGACTATTGTTTT 59.419 43.478 0.00 0.00 0.00 2.43
1415 1464 3.933332 CGTGGAGGGAGACTATTGTTTTC 59.067 47.826 0.00 0.00 0.00 2.29
1463 1512 4.307032 AGTTTGATGTAGCCCAGATTGT 57.693 40.909 0.00 0.00 0.00 2.71
1840 1889 6.154363 TGCTTTTCCCATTTCAACTTATAGGG 59.846 38.462 0.00 0.00 36.15 3.53
1921 1970 7.057264 AGAGATAATCTTGGGTTTAGGCTTTC 58.943 38.462 0.00 0.00 32.99 2.62
2016 2067 1.968493 ACGTGACCCACTGTTACAGAT 59.032 47.619 20.07 0.39 33.22 2.90
2420 2474 3.553375 TGATGGGAAGGGTATCCGATA 57.447 47.619 0.00 0.00 37.95 2.92
2453 2507 6.749118 GCATTTATTTGTCACTTCCTGATGAC 59.251 38.462 0.00 0.00 44.56 3.06
2529 2584 7.976734 CCATTTACTAAACTGAAACAACCACAA 59.023 33.333 0.00 0.00 0.00 3.33
2688 2743 4.392940 CATTCCTCAAACTTGTGACCTCT 58.607 43.478 0.00 0.00 0.00 3.69
2690 2745 2.104792 TCCTCAAACTTGTGACCTCTGG 59.895 50.000 0.00 0.00 0.00 3.86
3007 3062 7.521261 GCAGATGAAGGCTAAAATTGAGGATAC 60.521 40.741 0.00 0.00 0.00 2.24
3094 3172 2.235546 GCTTAGCCGGGATTAAGCG 58.764 57.895 20.58 2.47 41.42 4.68
3134 3212 7.355332 CCAGAATTTGGCTGTTTTTGAATAG 57.645 36.000 0.00 0.00 40.87 1.73
3219 3298 3.114527 TGGTTCACACAGCAAGCAT 57.885 47.368 0.00 0.00 0.00 3.79
3220 3299 0.953727 TGGTTCACACAGCAAGCATC 59.046 50.000 0.00 0.00 0.00 3.91
3281 3360 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
3282 3361 3.056035 GGGGTAGGCTAGATATGAAACCG 60.056 52.174 0.00 0.00 0.00 4.44
3392 3471 4.787871 GCTCGCCAAGCCTATCAT 57.212 55.556 0.00 0.00 45.92 2.45
3405 3484 7.331791 CCAAGCCTATCATAACCCTTAGATAC 58.668 42.308 0.00 0.00 0.00 2.24
3457 3536 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
3592 3672 1.405105 GGCAGAGTTTCACACAGCAAA 59.595 47.619 0.00 0.00 0.00 3.68
3936 4019 4.154347 CCAGGAGGACGAGCTGCC 62.154 72.222 0.00 0.00 36.89 4.85
4034 4117 0.687427 GAGGAGGAAGAGGAGCTGCT 60.687 60.000 7.79 7.79 0.00 4.24
4540 4623 3.249999 GCGCTCGCTTAACCAACA 58.750 55.556 0.00 0.00 38.26 3.33
4616 4699 4.522971 CCTAGGGCAGAAGCGAAC 57.477 61.111 0.00 0.00 43.41 3.95
4623 4706 1.503818 GGCAGAAGCGAACCGTTTCA 61.504 55.000 15.87 0.00 46.43 2.69
4640 4723 2.691409 TCACTTAAGCGCTGCCTAAT 57.309 45.000 12.58 0.00 0.00 1.73
4650 4733 1.332028 CGCTGCCTAATAACGCTTTCG 60.332 52.381 0.00 0.00 42.43 3.46
4762 4845 5.813672 GCGTGTTGAGATAAATAGGTTACCA 59.186 40.000 3.51 0.00 0.00 3.25
4763 4846 6.238022 GCGTGTTGAGATAAATAGGTTACCAC 60.238 42.308 3.51 0.00 0.00 4.16
5291 6032 0.958822 GCTTGGTTAGTGGTTGTGGG 59.041 55.000 0.00 0.00 0.00 4.61
5450 6191 4.252878 GGCACACAATTCCCATTTTTAGG 58.747 43.478 0.00 0.00 0.00 2.69
5595 6341 4.100808 GGCATGTCCATATTTAAAAGGCCA 59.899 41.667 5.01 0.00 36.57 5.36
5638 6384 1.947456 ACGCTTCACTTTTTCCTGGAC 59.053 47.619 0.00 0.00 0.00 4.02
5644 6391 2.512056 TCACTTTTTCCTGGACCTTCCA 59.488 45.455 0.00 0.00 45.98 3.53
5856 6603 5.302059 AGCTACTAATGCGGATCAGTTAAGA 59.698 40.000 0.00 0.00 35.28 2.10
5926 6673 2.539081 GGGGTTCCTTGGTCCTGCT 61.539 63.158 0.00 0.00 0.00 4.24
6027 6774 1.195448 CAAGGCTAGTGTGCAACTTCG 59.805 52.381 6.82 1.96 40.56 3.79
6176 6923 9.827198 TTAAGAATATTGGCATATCCCTCATTT 57.173 29.630 0.00 0.00 0.00 2.32
6177 6924 8.731591 AAGAATATTGGCATATCCCTCATTTT 57.268 30.769 0.00 0.00 0.00 1.82
6178 6925 9.827198 AAGAATATTGGCATATCCCTCATTTTA 57.173 29.630 0.00 0.00 0.00 1.52
6457 7204 2.575279 AGGTGCAATGAAGAGAGGTGAT 59.425 45.455 0.00 0.00 0.00 3.06
6496 7243 6.071320 GGATTTAGTGATTAAAGGGGCAGAT 58.929 40.000 0.00 0.00 34.86 2.90
6574 7321 0.036010 CGTCTGGCCTCAAATGGTCT 60.036 55.000 3.32 0.00 31.91 3.85
6670 7417 1.098050 AAGACAGGGAAATCATGCGC 58.902 50.000 0.00 0.00 0.00 6.09
7250 7997 0.400213 TGGCGGTTCATCTGTTCCTT 59.600 50.000 0.00 0.00 0.00 3.36
7543 8290 0.111061 AGCAGATTGAAGGCCACACA 59.889 50.000 5.01 0.00 0.00 3.72
7762 8510 8.117360 AGCAGATGTAGCTTACCTTATTGGTTC 61.117 40.741 0.00 0.00 42.91 3.62
7797 8546 3.117794 CCATGTTTATTTGATGCGCTGG 58.882 45.455 9.73 0.00 0.00 4.85
7852 8601 6.715264 AGAAACGAATTTGAAGGATTGTACCT 59.285 34.615 0.00 0.00 42.69 3.08
7883 8635 5.859205 ACATGAGCCTGTTTTTCTTCTTT 57.141 34.783 0.00 0.00 0.00 2.52
7884 8636 6.959639 ACATGAGCCTGTTTTTCTTCTTTA 57.040 33.333 0.00 0.00 0.00 1.85
7885 8637 7.346751 ACATGAGCCTGTTTTTCTTCTTTAA 57.653 32.000 0.00 0.00 0.00 1.52
8016 8777 3.452474 CACTTCTATTCGGCTTCCTGAG 58.548 50.000 0.00 0.00 0.00 3.35
8047 8808 3.686726 AGACGAAGCTAAAATGAAGGCAG 59.313 43.478 0.00 0.00 0.00 4.85
8062 8823 2.605837 GGCAGAACCTTAGTCTAGCC 57.394 55.000 0.00 0.00 34.51 3.93
8121 10765 1.675310 TTGGCGATGAAGCACCCTG 60.675 57.895 0.00 0.00 39.27 4.45
8130 10774 0.865769 GAAGCACCCTGTACAACACG 59.134 55.000 0.00 0.00 0.00 4.49
8137 10781 1.604693 CCCTGTACAACACGTGGACTC 60.605 57.143 21.57 6.77 42.27 3.36
8178 10822 3.129287 CACCACATTGTTATCAAGCCTCC 59.871 47.826 0.00 0.00 36.97 4.30
8195 10839 0.534203 TCCTTTGTCCTTCGTGGCAC 60.534 55.000 7.79 7.79 35.26 5.01
8202 10846 1.392510 GTCCTTCGTGGCACGTAATTC 59.607 52.381 35.65 21.37 43.14 2.17
8208 10852 2.006888 CGTGGCACGTAATTCCTTCAT 58.993 47.619 30.56 0.00 36.74 2.57
8209 10853 2.223021 CGTGGCACGTAATTCCTTCATG 60.223 50.000 30.56 0.00 36.74 3.07
8218 10862 5.163622 ACGTAATTCCTTCATGATTTGGCTG 60.164 40.000 0.00 0.00 0.00 4.85
8226 10870 2.028839 TCATGATTTGGCTGTTGGCTTG 60.029 45.455 0.00 0.00 41.46 4.01
8230 10874 2.818130 TTTGGCTGTTGGCTTGATTC 57.182 45.000 0.00 0.00 41.46 2.52
8238 10882 3.415212 TGTTGGCTTGATTCTCTTCCTG 58.585 45.455 0.00 0.00 0.00 3.86
8286 10930 2.150397 AGCACGCCGTCTTATAATCC 57.850 50.000 0.00 0.00 0.00 3.01
8305 10949 4.313277 TCCTGCAGACTAATCTTGATCG 57.687 45.455 17.39 0.00 30.42 3.69
8333 10977 9.229784 CTTATGAAGTTGCTGCAATAAATAGTG 57.770 33.333 19.11 3.50 0.00 2.74
8334 10978 6.816134 TGAAGTTGCTGCAATAAATAGTGA 57.184 33.333 19.11 0.00 0.00 3.41
8366 11010 1.742768 CACGGTGGCTCCTATCCTC 59.257 63.158 0.00 0.00 0.00 3.71
8378 11022 2.405618 CTATCCTCATGGACAGGGGA 57.594 55.000 0.00 0.00 46.51 4.81
8484 11128 3.138304 AGTGATAAAGTCAACAAGCGCA 58.862 40.909 11.47 0.00 38.90 6.09
8485 11129 3.058914 AGTGATAAAGTCAACAAGCGCAC 60.059 43.478 11.47 0.00 38.90 5.34
8486 11130 2.875317 TGATAAAGTCAACAAGCGCACA 59.125 40.909 11.47 0.00 32.78 4.57
8487 11131 3.501828 TGATAAAGTCAACAAGCGCACAT 59.498 39.130 11.47 0.00 32.78 3.21
8488 11132 2.124011 AAAGTCAACAAGCGCACATG 57.876 45.000 11.47 8.37 0.00 3.21
8489 11133 1.024271 AAGTCAACAAGCGCACATGT 58.976 45.000 11.47 9.11 0.00 3.21
8490 11134 0.588252 AGTCAACAAGCGCACATGTC 59.412 50.000 11.47 0.81 0.00 3.06
8491 11135 0.307453 GTCAACAAGCGCACATGTCA 59.693 50.000 11.47 0.00 0.00 3.58
8492 11136 0.587768 TCAACAAGCGCACATGTCAG 59.412 50.000 11.47 8.39 0.00 3.51
8493 11137 0.386352 CAACAAGCGCACATGTCAGG 60.386 55.000 11.47 1.93 0.00 3.86
8494 11138 2.133742 AACAAGCGCACATGTCAGGC 62.134 55.000 11.47 0.00 0.00 4.85
8495 11139 2.033141 AAGCGCACATGTCAGGCT 59.967 55.556 11.47 8.57 35.01 4.58
8496 11140 2.330372 AAGCGCACATGTCAGGCTG 61.330 57.895 11.47 8.58 33.58 4.85
8497 11141 3.807538 GCGCACATGTCAGGCTGG 61.808 66.667 15.73 0.21 0.00 4.85
8498 11142 3.129502 CGCACATGTCAGGCTGGG 61.130 66.667 15.73 4.82 0.00 4.45
8499 11143 2.352422 GCACATGTCAGGCTGGGA 59.648 61.111 15.73 1.34 0.00 4.37
8500 11144 1.303561 GCACATGTCAGGCTGGGAA 60.304 57.895 15.73 0.58 0.00 3.97
8501 11145 0.682209 GCACATGTCAGGCTGGGAAT 60.682 55.000 15.73 3.17 0.00 3.01
8502 11146 1.408683 GCACATGTCAGGCTGGGAATA 60.409 52.381 15.73 0.00 0.00 1.75
8503 11147 2.569059 CACATGTCAGGCTGGGAATAG 58.431 52.381 15.73 3.04 0.00 1.73
8504 11148 2.092753 CACATGTCAGGCTGGGAATAGT 60.093 50.000 15.73 3.68 0.00 2.12
8505 11149 2.578021 ACATGTCAGGCTGGGAATAGTT 59.422 45.455 15.73 0.00 0.00 2.24
8506 11150 3.010584 ACATGTCAGGCTGGGAATAGTTT 59.989 43.478 15.73 0.00 0.00 2.66
8507 11151 3.071874 TGTCAGGCTGGGAATAGTTTG 57.928 47.619 15.73 0.00 0.00 2.93
8508 11152 2.290896 TGTCAGGCTGGGAATAGTTTGG 60.291 50.000 15.73 0.00 0.00 3.28
8509 11153 2.026262 GTCAGGCTGGGAATAGTTTGGA 60.026 50.000 15.73 0.00 0.00 3.53
8510 11154 2.852449 TCAGGCTGGGAATAGTTTGGAT 59.148 45.455 15.73 0.00 0.00 3.41
8511 11155 3.117888 TCAGGCTGGGAATAGTTTGGATC 60.118 47.826 15.73 0.00 0.00 3.36
8512 11156 2.852449 AGGCTGGGAATAGTTTGGATCA 59.148 45.455 0.00 0.00 0.00 2.92
8513 11157 3.269381 AGGCTGGGAATAGTTTGGATCAA 59.731 43.478 0.00 0.00 0.00 2.57
8514 11158 4.023291 GGCTGGGAATAGTTTGGATCAAA 58.977 43.478 0.00 0.00 0.00 2.69
8515 11159 4.466015 GGCTGGGAATAGTTTGGATCAAAA 59.534 41.667 0.00 0.00 35.03 2.44
8516 11160 5.410924 GCTGGGAATAGTTTGGATCAAAAC 58.589 41.667 16.69 16.69 39.80 2.43
8518 11162 6.295292 GCTGGGAATAGTTTGGATCAAAACTT 60.295 38.462 28.83 15.19 45.84 2.66
8519 11163 7.093945 GCTGGGAATAGTTTGGATCAAAACTTA 60.094 37.037 28.83 16.84 45.84 2.24
8520 11164 8.348285 TGGGAATAGTTTGGATCAAAACTTAG 57.652 34.615 28.83 0.00 45.84 2.18
8521 11165 7.947890 TGGGAATAGTTTGGATCAAAACTTAGT 59.052 33.333 28.83 16.45 45.84 2.24
8522 11166 8.803235 GGGAATAGTTTGGATCAAAACTTAGTT 58.197 33.333 28.83 21.02 45.84 2.24
8527 11171 8.716646 AGTTTGGATCAAAACTTAGTTTTTGG 57.283 30.769 20.58 10.27 45.84 3.28
8528 11172 8.318412 AGTTTGGATCAAAACTTAGTTTTTGGT 58.682 29.630 20.58 11.64 45.84 3.67
8529 11173 8.941977 GTTTGGATCAAAACTTAGTTTTTGGTT 58.058 29.630 19.05 5.91 42.11 3.67
8530 11174 9.508642 TTTGGATCAAAACTTAGTTTTTGGTTT 57.491 25.926 19.05 4.28 42.11 3.27
8531 11175 8.485976 TGGATCAAAACTTAGTTTTTGGTTTG 57.514 30.769 19.05 9.07 42.11 2.93
8532 11176 7.550906 TGGATCAAAACTTAGTTTTTGGTTTGG 59.449 33.333 19.05 7.70 42.11 3.28
8533 11177 7.551262 GGATCAAAACTTAGTTTTTGGTTTGGT 59.449 33.333 19.05 5.49 42.11 3.67
8534 11178 8.856153 ATCAAAACTTAGTTTTTGGTTTGGTT 57.144 26.923 19.05 1.11 42.11 3.67
8535 11179 8.678593 TCAAAACTTAGTTTTTGGTTTGGTTT 57.321 26.923 19.05 0.00 42.11 3.27
8536 11180 9.121658 TCAAAACTTAGTTTTTGGTTTGGTTTT 57.878 25.926 19.05 0.00 42.11 2.43
8537 11181 9.737427 CAAAACTTAGTTTTTGGTTTGGTTTTT 57.263 25.926 19.05 0.00 42.11 1.94
8538 11182 9.737427 AAAACTTAGTTTTTGGTTTGGTTTTTG 57.263 25.926 16.34 0.00 42.11 2.44
8539 11183 8.678593 AACTTAGTTTTTGGTTTGGTTTTTGA 57.321 26.923 0.00 0.00 0.00 2.69
8540 11184 8.856153 ACTTAGTTTTTGGTTTGGTTTTTGAT 57.144 26.923 0.00 0.00 0.00 2.57
8541 11185 9.290988 ACTTAGTTTTTGGTTTGGTTTTTGATT 57.709 25.926 0.00 0.00 0.00 2.57
8543 11187 9.899226 TTAGTTTTTGGTTTGGTTTTTGATTTG 57.101 25.926 0.00 0.00 0.00 2.32
8544 11188 7.374272 AGTTTTTGGTTTGGTTTTTGATTTGG 58.626 30.769 0.00 0.00 0.00 3.28
8545 11189 6.901081 TTTTGGTTTGGTTTTTGATTTGGT 57.099 29.167 0.00 0.00 0.00 3.67
8546 11190 6.502136 TTTGGTTTGGTTTTTGATTTGGTC 57.498 33.333 0.00 0.00 0.00 4.02
8547 11191 5.428184 TGGTTTGGTTTTTGATTTGGTCT 57.572 34.783 0.00 0.00 0.00 3.85
8548 11192 5.423886 TGGTTTGGTTTTTGATTTGGTCTC 58.576 37.500 0.00 0.00 0.00 3.36
8549 11193 5.046304 TGGTTTGGTTTTTGATTTGGTCTCA 60.046 36.000 0.00 0.00 0.00 3.27
8550 11194 5.293324 GGTTTGGTTTTTGATTTGGTCTCAC 59.707 40.000 0.00 0.00 0.00 3.51
8551 11195 5.930837 TTGGTTTTTGATTTGGTCTCACT 57.069 34.783 0.00 0.00 0.00 3.41
8552 11196 7.262048 GTTTGGTTTTTGATTTGGTCTCACTA 58.738 34.615 0.00 0.00 0.00 2.74
8553 11197 6.633500 TGGTTTTTGATTTGGTCTCACTAG 57.367 37.500 0.00 0.00 0.00 2.57
8554 11198 6.126409 TGGTTTTTGATTTGGTCTCACTAGT 58.874 36.000 0.00 0.00 0.00 2.57
8555 11199 6.605594 TGGTTTTTGATTTGGTCTCACTAGTT 59.394 34.615 0.00 0.00 0.00 2.24
8556 11200 7.123547 TGGTTTTTGATTTGGTCTCACTAGTTT 59.876 33.333 0.00 0.00 0.00 2.66
8557 11201 7.435192 GGTTTTTGATTTGGTCTCACTAGTTTG 59.565 37.037 0.00 0.00 0.00 2.93
8558 11202 6.633500 TTTGATTTGGTCTCACTAGTTTGG 57.367 37.500 0.00 0.00 0.00 3.28
8559 11203 5.304686 TGATTTGGTCTCACTAGTTTGGT 57.695 39.130 0.00 0.00 0.00 3.67
8560 11204 5.305585 TGATTTGGTCTCACTAGTTTGGTC 58.694 41.667 0.00 0.00 0.00 4.02
8561 11205 5.071788 TGATTTGGTCTCACTAGTTTGGTCT 59.928 40.000 0.00 0.00 0.00 3.85
8562 11206 4.602340 TTGGTCTCACTAGTTTGGTCTC 57.398 45.455 0.00 0.00 0.00 3.36
8563 11207 3.845860 TGGTCTCACTAGTTTGGTCTCT 58.154 45.455 0.00 0.00 0.00 3.10
8564 11208 4.994282 TGGTCTCACTAGTTTGGTCTCTA 58.006 43.478 0.00 0.00 0.00 2.43
8565 11209 4.765856 TGGTCTCACTAGTTTGGTCTCTAC 59.234 45.833 0.00 0.00 0.00 2.59
8566 11210 5.011586 GGTCTCACTAGTTTGGTCTCTACT 58.988 45.833 0.00 0.00 0.00 2.57
8567 11211 5.106078 GGTCTCACTAGTTTGGTCTCTACTG 60.106 48.000 0.00 0.00 0.00 2.74
8568 11212 5.010933 TCTCACTAGTTTGGTCTCTACTGG 58.989 45.833 0.00 0.00 0.00 4.00
8569 11213 4.994282 TCACTAGTTTGGTCTCTACTGGA 58.006 43.478 0.00 0.00 0.00 3.86
8570 11214 5.580998 TCACTAGTTTGGTCTCTACTGGAT 58.419 41.667 0.00 0.00 0.00 3.41
8571 11215 6.017192 TCACTAGTTTGGTCTCTACTGGATT 58.983 40.000 0.00 0.00 0.00 3.01
8572 11216 6.497259 TCACTAGTTTGGTCTCTACTGGATTT 59.503 38.462 0.00 0.00 0.00 2.17
8573 11217 7.672660 TCACTAGTTTGGTCTCTACTGGATTTA 59.327 37.037 0.00 0.00 0.00 1.40
8574 11218 7.976734 CACTAGTTTGGTCTCTACTGGATTTAG 59.023 40.741 0.00 0.00 0.00 1.85
8575 11219 7.894364 ACTAGTTTGGTCTCTACTGGATTTAGA 59.106 37.037 0.00 0.00 0.00 2.10
8576 11220 7.741554 AGTTTGGTCTCTACTGGATTTAGAT 57.258 36.000 0.00 0.00 0.00 1.98
8577 11221 8.840200 AGTTTGGTCTCTACTGGATTTAGATA 57.160 34.615 0.00 0.00 0.00 1.98
8578 11222 8.919145 AGTTTGGTCTCTACTGGATTTAGATAG 58.081 37.037 0.00 0.00 0.00 2.08
8579 11223 8.915036 GTTTGGTCTCTACTGGATTTAGATAGA 58.085 37.037 0.00 0.00 0.00 1.98
8580 11224 8.466617 TTGGTCTCTACTGGATTTAGATAGAC 57.533 38.462 0.00 0.00 0.00 2.59
8581 11225 7.583625 TGGTCTCTACTGGATTTAGATAGACA 58.416 38.462 0.00 0.00 28.88 3.41
8582 11226 8.059461 TGGTCTCTACTGGATTTAGATAGACAA 58.941 37.037 0.00 0.00 28.88 3.18
8583 11227 8.915036 GGTCTCTACTGGATTTAGATAGACAAA 58.085 37.037 0.00 0.00 28.88 2.83
8584 11228 9.738832 GTCTCTACTGGATTTAGATAGACAAAC 57.261 37.037 0.00 0.00 0.00 2.93
8585 11229 9.475620 TCTCTACTGGATTTAGATAGACAAACA 57.524 33.333 0.00 0.00 0.00 2.83
8591 11235 9.793252 CTGGATTTAGATAGACAAACAATTTGG 57.207 33.333 6.28 0.00 44.81 3.28
8592 11236 9.308000 TGGATTTAGATAGACAAACAATTTGGT 57.692 29.630 6.28 0.00 44.81 3.67
8595 11239 9.840427 ATTTAGATAGACAAACAATTTGGTTCG 57.160 29.630 0.00 0.00 44.81 3.95
8596 11240 6.254281 AGATAGACAAACAATTTGGTTCGG 57.746 37.500 0.00 0.00 44.81 4.30
8597 11241 5.768164 AGATAGACAAACAATTTGGTTCGGT 59.232 36.000 0.00 0.00 44.81 4.69
8598 11242 4.729227 AGACAAACAATTTGGTTCGGTT 57.271 36.364 0.00 0.00 44.81 4.44
8599 11243 5.079689 AGACAAACAATTTGGTTCGGTTT 57.920 34.783 0.00 0.00 44.81 3.27
8601 11245 4.822026 ACAAACAATTTGGTTCGGTTTGA 58.178 34.783 18.85 0.00 46.81 2.69
8602 11246 4.867608 ACAAACAATTTGGTTCGGTTTGAG 59.132 37.500 18.85 0.00 46.81 3.02
8603 11247 4.729227 AACAATTTGGTTCGGTTTGAGT 57.271 36.364 0.78 0.00 0.00 3.41
8604 11248 4.729227 ACAATTTGGTTCGGTTTGAGTT 57.271 36.364 0.78 0.00 0.00 3.01
8605 11249 4.429108 ACAATTTGGTTCGGTTTGAGTTG 58.571 39.130 0.78 0.00 0.00 3.16
8606 11250 4.081917 ACAATTTGGTTCGGTTTGAGTTGT 60.082 37.500 0.78 0.00 0.00 3.32
8607 11251 3.495670 TTTGGTTCGGTTTGAGTTGTG 57.504 42.857 0.00 0.00 0.00 3.33
8608 11252 1.384525 TGGTTCGGTTTGAGTTGTGG 58.615 50.000 0.00 0.00 0.00 4.17
8609 11253 0.030235 GGTTCGGTTTGAGTTGTGGC 59.970 55.000 0.00 0.00 0.00 5.01
8610 11254 1.021968 GTTCGGTTTGAGTTGTGGCT 58.978 50.000 0.00 0.00 0.00 4.75
8611 11255 2.215196 GTTCGGTTTGAGTTGTGGCTA 58.785 47.619 0.00 0.00 0.00 3.93
8612 11256 2.614983 GTTCGGTTTGAGTTGTGGCTAA 59.385 45.455 0.00 0.00 0.00 3.09
8613 11257 3.134574 TCGGTTTGAGTTGTGGCTAAT 57.865 42.857 0.00 0.00 0.00 1.73
8614 11258 4.274602 TCGGTTTGAGTTGTGGCTAATA 57.725 40.909 0.00 0.00 0.00 0.98
8615 11259 4.643463 TCGGTTTGAGTTGTGGCTAATAA 58.357 39.130 0.00 0.00 0.00 1.40
8616 11260 4.453136 TCGGTTTGAGTTGTGGCTAATAAC 59.547 41.667 0.00 0.00 0.00 1.89
8617 11261 4.668177 CGGTTTGAGTTGTGGCTAATAACG 60.668 45.833 0.00 0.00 0.00 3.18
8618 11262 4.379082 GGTTTGAGTTGTGGCTAATAACGG 60.379 45.833 0.00 0.00 0.00 4.44
8619 11263 3.965379 TGAGTTGTGGCTAATAACGGA 57.035 42.857 0.00 0.00 0.00 4.69
8620 11264 4.481368 TGAGTTGTGGCTAATAACGGAT 57.519 40.909 0.00 0.00 0.00 4.18
8621 11265 4.839121 TGAGTTGTGGCTAATAACGGATT 58.161 39.130 0.00 0.00 0.00 3.01
8622 11266 4.634004 TGAGTTGTGGCTAATAACGGATTG 59.366 41.667 0.00 0.00 0.00 2.67
8623 11267 3.945285 AGTTGTGGCTAATAACGGATTGG 59.055 43.478 0.00 0.00 0.00 3.16
8624 11268 3.916359 TGTGGCTAATAACGGATTGGA 57.084 42.857 0.71 0.00 0.00 3.53
8625 11269 4.431416 TGTGGCTAATAACGGATTGGAT 57.569 40.909 0.71 0.00 0.00 3.41
8626 11270 5.554437 TGTGGCTAATAACGGATTGGATA 57.446 39.130 0.71 0.00 0.00 2.59
8627 11271 6.121776 TGTGGCTAATAACGGATTGGATAT 57.878 37.500 0.71 0.00 0.00 1.63
8628 11272 5.937540 TGTGGCTAATAACGGATTGGATATG 59.062 40.000 0.71 0.00 0.00 1.78
8629 11273 5.938125 GTGGCTAATAACGGATTGGATATGT 59.062 40.000 0.71 0.00 0.00 2.29
8630 11274 6.430000 GTGGCTAATAACGGATTGGATATGTT 59.570 38.462 0.71 0.00 0.00 2.71
8631 11275 7.001674 TGGCTAATAACGGATTGGATATGTTT 58.998 34.615 0.71 0.00 0.00 2.83
8632 11276 8.158132 TGGCTAATAACGGATTGGATATGTTTA 58.842 33.333 0.71 0.00 0.00 2.01
8633 11277 8.665685 GGCTAATAACGGATTGGATATGTTTAG 58.334 37.037 0.71 0.00 0.00 1.85
8634 11278 8.665685 GCTAATAACGGATTGGATATGTTTAGG 58.334 37.037 0.71 0.00 0.00 2.69
8635 11279 9.720769 CTAATAACGGATTGGATATGTTTAGGT 57.279 33.333 0.00 0.00 0.00 3.08
8636 11280 8.990163 AATAACGGATTGGATATGTTTAGGTT 57.010 30.769 0.00 0.00 0.00 3.50
8637 11281 6.693315 AACGGATTGGATATGTTTAGGTTG 57.307 37.500 0.00 0.00 0.00 3.77
8638 11282 5.130350 ACGGATTGGATATGTTTAGGTTGG 58.870 41.667 0.00 0.00 0.00 3.77
8639 11283 4.518970 CGGATTGGATATGTTTAGGTTGGG 59.481 45.833 0.00 0.00 0.00 4.12
8640 11284 5.454966 GGATTGGATATGTTTAGGTTGGGT 58.545 41.667 0.00 0.00 0.00 4.51
8641 11285 5.301805 GGATTGGATATGTTTAGGTTGGGTG 59.698 44.000 0.00 0.00 0.00 4.61
8642 11286 3.626930 TGGATATGTTTAGGTTGGGTGC 58.373 45.455 0.00 0.00 0.00 5.01
8643 11287 3.010696 TGGATATGTTTAGGTTGGGTGCA 59.989 43.478 0.00 0.00 0.00 4.57
8644 11288 3.632145 GGATATGTTTAGGTTGGGTGCAG 59.368 47.826 0.00 0.00 0.00 4.41
8645 11289 2.969821 ATGTTTAGGTTGGGTGCAGA 57.030 45.000 0.00 0.00 0.00 4.26
8646 11290 1.975660 TGTTTAGGTTGGGTGCAGAC 58.024 50.000 0.00 0.00 0.00 3.51
8647 11291 1.493022 TGTTTAGGTTGGGTGCAGACT 59.507 47.619 0.00 0.00 0.00 3.24
8648 11292 2.092103 TGTTTAGGTTGGGTGCAGACTT 60.092 45.455 0.00 0.00 0.00 3.01
8649 11293 3.136809 TGTTTAGGTTGGGTGCAGACTTA 59.863 43.478 0.00 0.00 0.00 2.24
8650 11294 4.202524 TGTTTAGGTTGGGTGCAGACTTAT 60.203 41.667 0.00 0.00 0.00 1.73
8651 11295 2.496899 AGGTTGGGTGCAGACTTATG 57.503 50.000 0.00 0.00 0.00 1.90
8652 11296 1.004745 AGGTTGGGTGCAGACTTATGG 59.995 52.381 0.00 0.00 0.00 2.74
8653 11297 1.463674 GTTGGGTGCAGACTTATGGG 58.536 55.000 0.00 0.00 0.00 4.00
8654 11298 1.072266 TTGGGTGCAGACTTATGGGT 58.928 50.000 0.00 0.00 0.00 4.51
8655 11299 1.072266 TGGGTGCAGACTTATGGGTT 58.928 50.000 0.00 0.00 0.00 4.11
8656 11300 1.271871 TGGGTGCAGACTTATGGGTTG 60.272 52.381 0.00 0.00 0.00 3.77
8657 11301 1.004277 GGGTGCAGACTTATGGGTTGA 59.996 52.381 0.00 0.00 0.00 3.18
8658 11302 2.554344 GGGTGCAGACTTATGGGTTGAA 60.554 50.000 0.00 0.00 0.00 2.69
8659 11303 3.153919 GGTGCAGACTTATGGGTTGAAA 58.846 45.455 0.00 0.00 0.00 2.69
8660 11304 3.572255 GGTGCAGACTTATGGGTTGAAAA 59.428 43.478 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 9.783425 CGAAAAGAAAATACAAGCTTGAAAATC 57.217 29.630 32.50 20.63 0.00 2.17
65 66 9.313118 ACGAAAAGAAAATACAAGCTTGAAAAT 57.687 25.926 32.50 18.43 0.00 1.82
66 67 8.696410 ACGAAAAGAAAATACAAGCTTGAAAA 57.304 26.923 32.50 17.03 0.00 2.29
67 68 7.971168 TGACGAAAAGAAAATACAAGCTTGAAA 59.029 29.630 32.50 19.50 0.00 2.69
68 69 7.476667 TGACGAAAAGAAAATACAAGCTTGAA 58.523 30.769 32.50 0.00 0.00 2.69
69 70 7.022055 TGACGAAAAGAAAATACAAGCTTGA 57.978 32.000 32.50 16.27 0.00 3.02
70 71 7.858052 ATGACGAAAAGAAAATACAAGCTTG 57.142 32.000 24.84 24.84 0.00 4.01
71 72 9.959749 TTAATGACGAAAAGAAAATACAAGCTT 57.040 25.926 0.00 0.00 0.00 3.74
72 73 9.394477 GTTAATGACGAAAAGAAAATACAAGCT 57.606 29.630 0.00 0.00 0.00 3.74
73 74 9.394477 AGTTAATGACGAAAAGAAAATACAAGC 57.606 29.630 0.00 0.00 0.00 4.01
86 87 9.537192 TGACTTTCTTCTTAGTTAATGACGAAA 57.463 29.630 0.00 0.00 0.00 3.46
87 88 9.537192 TTGACTTTCTTCTTAGTTAATGACGAA 57.463 29.630 0.00 0.00 0.00 3.85
88 89 8.975439 GTTGACTTTCTTCTTAGTTAATGACGA 58.025 33.333 0.00 0.00 0.00 4.20
89 90 8.761497 TGTTGACTTTCTTCTTAGTTAATGACG 58.239 33.333 0.00 0.00 0.00 4.35
90 91 9.865484 GTGTTGACTTTCTTCTTAGTTAATGAC 57.135 33.333 0.00 0.00 0.00 3.06
91 92 8.761497 CGTGTTGACTTTCTTCTTAGTTAATGA 58.239 33.333 0.00 0.00 0.00 2.57
92 93 8.548721 ACGTGTTGACTTTCTTCTTAGTTAATG 58.451 33.333 0.00 0.00 0.00 1.90
93 94 8.658499 ACGTGTTGACTTTCTTCTTAGTTAAT 57.342 30.769 0.00 0.00 0.00 1.40
94 95 8.385111 CAACGTGTTGACTTTCTTCTTAGTTAA 58.615 33.333 6.91 0.00 42.93 2.01
95 96 7.546667 ACAACGTGTTGACTTTCTTCTTAGTTA 59.453 33.333 18.87 0.00 42.93 2.24
96 97 6.370718 ACAACGTGTTGACTTTCTTCTTAGTT 59.629 34.615 18.87 0.00 42.93 2.24
97 98 5.873164 ACAACGTGTTGACTTTCTTCTTAGT 59.127 36.000 18.87 0.00 42.93 2.24
98 99 6.345920 ACAACGTGTTGACTTTCTTCTTAG 57.654 37.500 18.87 0.00 42.93 2.18
99 100 5.005012 CGACAACGTGTTGACTTTCTTCTTA 59.995 40.000 18.87 0.00 42.93 2.10
100 101 4.201685 CGACAACGTGTTGACTTTCTTCTT 60.202 41.667 18.87 0.00 42.93 2.52
101 102 3.306166 CGACAACGTGTTGACTTTCTTCT 59.694 43.478 18.87 0.00 42.93 2.85
102 103 3.594312 CGACAACGTGTTGACTTTCTTC 58.406 45.455 18.87 3.88 42.93 2.87
103 104 3.651562 CGACAACGTGTTGACTTTCTT 57.348 42.857 18.87 0.00 42.93 2.52
401 403 4.400109 GCTCGGTCGCTCGTGTCA 62.400 66.667 0.00 0.00 0.00 3.58
403 405 3.898627 CTTGCTCGGTCGCTCGTGT 62.899 63.158 0.00 0.00 0.00 4.49
419 421 4.088421 CGCGAATACGAGCACCTT 57.912 55.556 0.00 0.00 42.66 3.50
436 438 2.494504 AAAAACTAGCGCGTGCGAGC 62.495 55.000 27.67 13.20 46.52 5.03
456 458 8.399425 ACAATGTACACGTGAAATAAAGAAACA 58.601 29.630 25.01 9.86 0.00 2.83
457 459 8.776680 ACAATGTACACGTGAAATAAAGAAAC 57.223 30.769 25.01 4.78 0.00 2.78
458 460 9.227490 CAACAATGTACACGTGAAATAAAGAAA 57.773 29.630 25.01 0.00 0.00 2.52
459 461 8.399425 ACAACAATGTACACGTGAAATAAAGAA 58.601 29.630 25.01 0.00 38.24 2.52
460 462 7.921787 ACAACAATGTACACGTGAAATAAAGA 58.078 30.769 25.01 0.00 38.24 2.52
493 504 2.951269 TGCTCCTGCAGTCCATTTG 58.049 52.632 13.81 0.00 45.31 2.32
513 529 4.481112 CCGACCCTTTGCATGCGC 62.481 66.667 14.09 0.00 39.24 6.09
533 549 4.003788 ACTGGCTCGTTCGGGTGG 62.004 66.667 0.00 0.00 0.00 4.61
602 626 2.036604 GGGGAGCGTCCAAAATTGAAAA 59.963 45.455 6.41 0.00 38.64 2.29
609 633 1.423794 AAGGAGGGGAGCGTCCAAAA 61.424 55.000 0.00 0.00 38.64 2.44
630 654 2.867091 AACACGTGACGCGCAGAAC 61.867 57.895 25.01 0.01 46.11 3.01
631 655 2.583868 AACACGTGACGCGCAGAA 60.584 55.556 25.01 0.00 46.11 3.02
632 656 3.326981 CAACACGTGACGCGCAGA 61.327 61.111 25.01 0.00 46.11 4.26
633 657 4.993945 GCAACACGTGACGCGCAG 62.994 66.667 25.01 2.42 46.11 5.18
635 659 4.993945 CTGCAACACGTGACGCGC 62.994 66.667 25.01 17.92 46.11 6.86
639 670 2.053116 CGCACTGCAACACGTGAC 60.053 61.111 25.01 11.69 33.04 3.67
640 671 3.268603 CCGCACTGCAACACGTGA 61.269 61.111 25.01 0.00 33.04 4.35
817 864 2.508526 GAGTATAGCTGGCCAAATGGG 58.491 52.381 7.01 0.00 40.85 4.00
818 865 2.158623 TGGAGTATAGCTGGCCAAATGG 60.159 50.000 7.01 0.00 38.53 3.16
819 866 2.880890 GTGGAGTATAGCTGGCCAAATG 59.119 50.000 7.01 0.00 0.00 2.32
820 867 2.509548 TGTGGAGTATAGCTGGCCAAAT 59.490 45.455 7.01 3.30 0.00 2.32
821 868 1.912731 TGTGGAGTATAGCTGGCCAAA 59.087 47.619 7.01 0.00 0.00 3.28
822 869 1.209504 GTGTGGAGTATAGCTGGCCAA 59.790 52.381 7.01 0.00 0.00 4.52
823 870 0.830648 GTGTGGAGTATAGCTGGCCA 59.169 55.000 4.71 4.71 0.00 5.36
824 871 0.830648 TGTGTGGAGTATAGCTGGCC 59.169 55.000 0.00 0.00 0.00 5.36
825 872 1.207089 TGTGTGTGGAGTATAGCTGGC 59.793 52.381 0.00 0.00 0.00 4.85
826 873 2.233676 TGTGTGTGTGGAGTATAGCTGG 59.766 50.000 0.00 0.00 0.00 4.85
827 874 3.254060 GTGTGTGTGTGGAGTATAGCTG 58.746 50.000 0.00 0.00 0.00 4.24
828 875 2.897326 TGTGTGTGTGTGGAGTATAGCT 59.103 45.455 0.00 0.00 0.00 3.32
829 876 2.993899 GTGTGTGTGTGTGGAGTATAGC 59.006 50.000 0.00 0.00 0.00 2.97
830 877 3.987868 GTGTGTGTGTGTGTGGAGTATAG 59.012 47.826 0.00 0.00 0.00 1.31
831 878 3.385111 TGTGTGTGTGTGTGTGGAGTATA 59.615 43.478 0.00 0.00 0.00 1.47
832 879 2.169561 TGTGTGTGTGTGTGTGGAGTAT 59.830 45.455 0.00 0.00 0.00 2.12
833 880 1.550976 TGTGTGTGTGTGTGTGGAGTA 59.449 47.619 0.00 0.00 0.00 2.59
834 881 0.323302 TGTGTGTGTGTGTGTGGAGT 59.677 50.000 0.00 0.00 0.00 3.85
835 882 0.726827 GTGTGTGTGTGTGTGTGGAG 59.273 55.000 0.00 0.00 0.00 3.86
836 883 0.035458 TGTGTGTGTGTGTGTGTGGA 59.965 50.000 0.00 0.00 0.00 4.02
837 884 0.167908 GTGTGTGTGTGTGTGTGTGG 59.832 55.000 0.00 0.00 0.00 4.17
838 885 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
839 886 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
840 887 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
841 888 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
842 889 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
843 890 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
844 891 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
845 892 1.155889 CTGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
846 893 0.179192 GCTGTGTGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
847 894 1.305219 GGCTGTGTGTGTGTGTGTGT 61.305 55.000 0.00 0.00 0.00 3.72
848 895 1.429021 GGCTGTGTGTGTGTGTGTG 59.571 57.895 0.00 0.00 0.00 3.82
849 896 2.106074 CGGCTGTGTGTGTGTGTGT 61.106 57.895 0.00 0.00 0.00 3.72
850 897 2.708865 CGGCTGTGTGTGTGTGTG 59.291 61.111 0.00 0.00 0.00 3.82
851 898 3.202001 GCGGCTGTGTGTGTGTGT 61.202 61.111 0.00 0.00 0.00 3.72
852 899 4.297891 CGCGGCTGTGTGTGTGTG 62.298 66.667 0.00 0.00 0.00 3.82
1098 1147 2.819595 GGCAGATCCAAGCGCGAA 60.820 61.111 12.10 0.00 34.01 4.70
1131 1180 6.149474 ACTCTCTCCGTTTACATTTCCATTTG 59.851 38.462 0.00 0.00 0.00 2.32
1132 1181 6.149474 CACTCTCTCCGTTTACATTTCCATTT 59.851 38.462 0.00 0.00 0.00 2.32
1137 1186 3.371285 GCCACTCTCTCCGTTTACATTTC 59.629 47.826 0.00 0.00 0.00 2.17
1160 1209 1.226018 GTTTCGGCGCCTCAAATCG 60.226 57.895 26.68 9.46 0.00 3.34
1254 1303 1.520787 GCCACCCAACGATCTACCG 60.521 63.158 0.00 0.00 0.00 4.02
1255 1304 1.153229 GGCCACCCAACGATCTACC 60.153 63.158 0.00 0.00 0.00 3.18
1388 1437 2.820728 TAGTCTCCCTCCACGATTGA 57.179 50.000 0.00 0.00 0.00 2.57
1414 1463 5.991606 CCTGTCAAGAACATGAACTAACAGA 59.008 40.000 23.24 9.90 37.23 3.41
1415 1464 5.760253 ACCTGTCAAGAACATGAACTAACAG 59.240 40.000 19.30 19.30 37.23 3.16
1429 1478 5.290493 ACATCAAACTACACCTGTCAAGA 57.710 39.130 0.00 0.00 0.00 3.02
1751 1800 9.561069 AAACAATCTAGTCTAAAGAGCAAAGAA 57.439 29.630 0.00 0.00 0.00 2.52
1784 1833 6.752285 TGTGGAATTCTGATCTCATATCCA 57.248 37.500 5.23 6.16 0.00 3.41
1855 1904 8.089625 TCCCTGTATGTGAGATCTTCATAAAA 57.910 34.615 17.28 11.15 38.29 1.52
1921 1970 9.398170 CATCTGTAACCTTTTCAATTAACACTG 57.602 33.333 0.00 0.00 0.00 3.66
2016 2067 7.330946 CCGAGAAACAGATGATGTAACTGTAAA 59.669 37.037 0.00 0.00 43.00 2.01
2250 2302 8.904834 TCCTAACTTATGCACTGTAAAACAAAA 58.095 29.630 0.00 0.00 0.00 2.44
2270 2323 7.320443 TCATATTTGCATGTCAGTTCCTAAC 57.680 36.000 0.00 0.00 0.00 2.34
2290 2343 5.698089 GGAGAATGCATGATCGAACTTCATA 59.302 40.000 0.00 0.00 32.63 2.15
2355 2408 6.947903 CAGCATAGAGTATACTGCATGAAG 57.052 41.667 20.19 0.00 37.09 3.02
2420 2474 7.414222 AAGTGACAAATAAATGCATCCAGAT 57.586 32.000 0.00 0.00 0.00 2.90
2595 2650 7.119407 TCTGTAGTGAAGTACATGTACAGTCTC 59.881 40.741 32.02 26.18 42.73 3.36
2688 2743 1.747145 CCCAAATGCAAGCACACCA 59.253 52.632 0.00 0.00 0.00 4.17
2690 2745 0.947180 CTGCCCAAATGCAAGCACAC 60.947 55.000 0.00 0.00 41.51 3.82
3134 3212 9.237846 GCTATGTTTCCTATTTTCTTTGCATAC 57.762 33.333 0.00 0.00 0.00 2.39
3177 3256 9.535878 CCACTAAACCTTATCTATTTCAGACTC 57.464 37.037 0.00 0.00 35.62 3.36
3219 3298 3.389329 GGCTTAAGATGGACATGGAGAGA 59.611 47.826 6.67 0.00 0.00 3.10
3220 3299 3.390639 AGGCTTAAGATGGACATGGAGAG 59.609 47.826 6.67 0.00 0.00 3.20
3282 3361 2.824341 TCCTAGGAAGTCCTCGTGAAAC 59.176 50.000 9.71 0.00 44.77 2.78
3358 3437 2.477375 CGAGCCAACGTAAAAACTAGCA 59.523 45.455 0.00 0.00 0.00 3.49
3392 3471 6.213195 TGAAAGGGTTTCGTATCTAAGGGTTA 59.787 38.462 0.00 0.00 42.55 2.85
3405 3484 1.145803 GTCCTCGTGAAAGGGTTTCG 58.854 55.000 0.00 0.00 42.55 3.46
3482 3562 4.062991 CCAACGTAAAAACTAGCCAGTCT 58.937 43.478 0.00 0.00 32.29 3.24
3575 3655 6.449635 TTTATGTTTGCTGTGTGAAACTCT 57.550 33.333 0.00 0.00 38.04 3.24
3936 4019 0.249073 CCTACTGGATCTGAACGCCG 60.249 60.000 0.00 0.00 34.57 6.46
3974 4057 3.570638 CTGAATGCCGGCAGCTCG 61.571 66.667 35.36 22.30 44.23 5.03
3986 4069 2.022035 TCCACCCCTACTGGATCTGAAT 60.022 50.000 0.00 0.00 32.52 2.57
4034 4117 3.358554 ACTCAGTTAGGGAGCGACA 57.641 52.632 0.00 0.00 35.79 4.35
4474 4557 4.569180 CTGGGCTACATGCGGGGG 62.569 72.222 0.00 0.00 44.05 5.40
4475 4558 4.569180 CCTGGGCTACATGCGGGG 62.569 72.222 0.00 0.00 44.05 5.73
4555 4638 1.328279 AAAAGCAAGGTTTAGCGGCT 58.672 45.000 7.98 7.98 36.13 5.52
4616 4699 0.452784 GCAGCGCTTAAGTGAAACGG 60.453 55.000 20.10 4.31 45.86 4.44
4623 4706 2.864343 CGTTATTAGGCAGCGCTTAAGT 59.136 45.455 7.50 0.00 33.87 2.24
4762 4845 9.305555 TCCTATATAACTAAATAGTTGAGCCGT 57.694 33.333 14.54 0.51 45.44 5.68
4839 4922 9.073368 CATGCTTCTCTTTCTAATTTTGTGATG 57.927 33.333 0.00 0.00 0.00 3.07
4905 4988 0.250295 ACGTGGGATGTGTTGGACAG 60.250 55.000 0.00 0.00 38.23 3.51
5291 6032 3.059188 CACAACATGTTACCAGGACGAAC 60.059 47.826 11.53 0.00 0.00 3.95
5450 6191 7.041372 ACCAATTATCTGGACACATAATTACGC 60.041 37.037 5.59 0.00 38.96 4.42
5595 6341 2.173519 CCACACCTTGATTGAGGCAAT 58.826 47.619 0.00 0.00 40.65 3.56
5610 6356 2.844122 AAAGTGAAGCGTTTCCACAC 57.156 45.000 9.65 2.03 32.09 3.82
5638 6384 3.119495 GGAAATGAACCGAATGTGGAAGG 60.119 47.826 0.00 0.00 0.00 3.46
5856 6603 7.604164 CGCTCCAGAAACCATATAATCTAATGT 59.396 37.037 0.00 0.00 0.00 2.71
6027 6774 1.661112 GCAAGCTAACTCGATGTGGAC 59.339 52.381 0.00 0.00 0.00 4.02
6177 6924 8.657729 GGAACGAAGGAAAAACAAAACAAAATA 58.342 29.630 0.00 0.00 0.00 1.40
6178 6925 7.173390 TGGAACGAAGGAAAAACAAAACAAAAT 59.827 29.630 0.00 0.00 0.00 1.82
6179 6926 6.482308 TGGAACGAAGGAAAAACAAAACAAAA 59.518 30.769 0.00 0.00 0.00 2.44
6180 6927 5.989777 TGGAACGAAGGAAAAACAAAACAAA 59.010 32.000 0.00 0.00 0.00 2.83
6251 6998 1.202580 GCCGGCACATGAGATAGAACT 60.203 52.381 24.80 0.00 0.00 3.01
6574 7321 2.942804 TCAGACACTTTGGGCATGAAA 58.057 42.857 0.00 0.00 0.00 2.69
6670 7417 0.967380 GAAGCTTGTGGGGGTCATGG 60.967 60.000 2.10 0.00 0.00 3.66
6697 7444 1.250328 CAACTCCAGCAATCAGGCAA 58.750 50.000 0.00 0.00 35.83 4.52
7576 8323 0.811616 GCCTGATAAGACCCTGCACG 60.812 60.000 0.00 0.00 0.00 5.34
7762 8510 8.859156 CAAATAAACATGGACATAAAAGGTTCG 58.141 33.333 0.00 0.00 0.00 3.95
7852 8601 6.892658 AAAACAGGCTCATGTAACATACAA 57.107 33.333 0.00 0.00 42.76 2.41
8016 8777 2.842394 TAGCTTCGTCTGGCTGCTGC 62.842 60.000 7.10 7.10 39.31 5.25
8047 8808 1.875488 TGGGGGCTAGACTAAGGTTC 58.125 55.000 0.00 0.00 0.00 3.62
8062 8823 8.946797 AAATATATCTTTTGAAGGAGATGGGG 57.053 34.615 4.14 0.00 34.60 4.96
8103 8864 1.675310 CAGGGTGCTTCATCGCCAA 60.675 57.895 0.00 0.00 38.34 4.52
8121 10765 2.292569 TCTCAGAGTCCACGTGTTGTAC 59.707 50.000 15.65 7.10 0.00 2.90
8130 10774 1.343069 ACCCACTTCTCAGAGTCCAC 58.657 55.000 0.00 0.00 0.00 4.02
8137 10781 0.895559 GGCCCAAACCCACTTCTCAG 60.896 60.000 0.00 0.00 0.00 3.35
8178 10822 1.157870 ACGTGCCACGAAGGACAAAG 61.158 55.000 25.94 0.00 46.05 2.77
8195 10839 5.163622 ACAGCCAAATCATGAAGGAATTACG 60.164 40.000 14.37 0.00 0.00 3.18
8202 10846 2.675889 GCCAACAGCCAAATCATGAAGG 60.676 50.000 0.00 3.52 34.35 3.46
8208 10852 1.702182 TCAAGCCAACAGCCAAATCA 58.298 45.000 0.00 0.00 45.47 2.57
8209 10853 3.056322 AGAATCAAGCCAACAGCCAAATC 60.056 43.478 0.00 0.00 45.47 2.17
8218 10862 3.416156 ACAGGAAGAGAATCAAGCCAAC 58.584 45.455 0.00 0.00 37.82 3.77
8254 10898 1.431496 GCGTGCTTAGTCCGGTTAAA 58.569 50.000 0.00 0.00 0.00 1.52
8255 10899 0.390209 GGCGTGCTTAGTCCGGTTAA 60.390 55.000 0.00 0.98 0.00 2.01
8261 10905 0.171903 TAAGACGGCGTGCTTAGTCC 59.828 55.000 21.19 0.00 34.41 3.85
8286 10930 4.930963 AGTCGATCAAGATTAGTCTGCAG 58.069 43.478 7.63 7.63 34.13 4.41
8305 10949 9.443283 CTATTTATTGCAGCAACTTCATAAGTC 57.557 33.333 10.85 0.00 41.91 3.01
8333 10977 2.223377 CACCGTGGCTTGTAGTTTTCTC 59.777 50.000 0.00 0.00 0.00 2.87
8334 10978 2.218603 CACCGTGGCTTGTAGTTTTCT 58.781 47.619 0.00 0.00 0.00 2.52
8366 11010 3.154710 CATTCATCATCCCCTGTCCATG 58.845 50.000 0.00 0.00 0.00 3.66
8378 11022 9.842775 ACTTACATGTTACTCATCATTCATCAT 57.157 29.630 2.30 0.00 34.09 2.45
8484 11128 2.200081 ACTATTCCCAGCCTGACATGT 58.800 47.619 0.00 0.00 0.00 3.21
8485 11129 3.287867 AACTATTCCCAGCCTGACATG 57.712 47.619 0.00 0.00 0.00 3.21
8486 11130 3.624777 CAAACTATTCCCAGCCTGACAT 58.375 45.455 0.00 0.00 0.00 3.06
8487 11131 2.290896 CCAAACTATTCCCAGCCTGACA 60.291 50.000 0.00 0.00 0.00 3.58
8488 11132 2.026262 TCCAAACTATTCCCAGCCTGAC 60.026 50.000 0.00 0.00 0.00 3.51
8489 11133 2.274542 TCCAAACTATTCCCAGCCTGA 58.725 47.619 0.00 0.00 0.00 3.86
8490 11134 2.806945 TCCAAACTATTCCCAGCCTG 57.193 50.000 0.00 0.00 0.00 4.85
8491 11135 2.852449 TGATCCAAACTATTCCCAGCCT 59.148 45.455 0.00 0.00 0.00 4.58
8492 11136 3.297134 TGATCCAAACTATTCCCAGCC 57.703 47.619 0.00 0.00 0.00 4.85
8493 11137 5.185828 AGTTTTGATCCAAACTATTCCCAGC 59.814 40.000 20.23 0.00 32.79 4.85
8494 11138 6.840780 AGTTTTGATCCAAACTATTCCCAG 57.159 37.500 20.23 0.00 32.79 4.45
8495 11139 7.947890 ACTAAGTTTTGATCCAAACTATTCCCA 59.052 33.333 21.49 6.16 32.79 4.37
8496 11140 8.349568 ACTAAGTTTTGATCCAAACTATTCCC 57.650 34.615 21.49 0.00 32.79 3.97
8501 11145 9.810545 CCAAAAACTAAGTTTTGATCCAAACTA 57.189 29.630 21.49 11.32 46.77 2.24
8502 11146 8.318412 ACCAAAAACTAAGTTTTGATCCAAACT 58.682 29.630 16.96 16.96 46.77 2.66
8503 11147 8.487313 ACCAAAAACTAAGTTTTGATCCAAAC 57.513 30.769 13.20 13.20 46.77 2.93
8504 11148 9.508642 AAACCAAAAACTAAGTTTTGATCCAAA 57.491 25.926 13.34 0.00 46.77 3.28
8505 11149 8.940952 CAAACCAAAAACTAAGTTTTGATCCAA 58.059 29.630 13.34 0.00 46.77 3.53
8506 11150 7.550906 CCAAACCAAAAACTAAGTTTTGATCCA 59.449 33.333 13.34 0.00 46.77 3.41
8507 11151 7.551262 ACCAAACCAAAAACTAAGTTTTGATCC 59.449 33.333 13.34 0.00 46.77 3.36
8508 11152 8.487313 ACCAAACCAAAAACTAAGTTTTGATC 57.513 30.769 13.34 0.00 46.77 2.92
8509 11153 8.856153 AACCAAACCAAAAACTAAGTTTTGAT 57.144 26.923 13.34 0.00 46.77 2.57
8510 11154 8.678593 AAACCAAACCAAAAACTAAGTTTTGA 57.321 26.923 13.34 0.00 46.77 2.69
8511 11155 9.737427 AAAAACCAAACCAAAAACTAAGTTTTG 57.263 25.926 9.90 9.90 43.67 2.44
8512 11156 9.737427 CAAAAACCAAACCAAAAACTAAGTTTT 57.263 25.926 0.00 0.00 45.94 2.43
8513 11157 9.121658 TCAAAAACCAAACCAAAAACTAAGTTT 57.878 25.926 0.00 0.00 37.34 2.66
8514 11158 8.678593 TCAAAAACCAAACCAAAAACTAAGTT 57.321 26.923 0.00 0.00 0.00 2.66
8515 11159 8.856153 ATCAAAAACCAAACCAAAAACTAAGT 57.144 26.923 0.00 0.00 0.00 2.24
8517 11161 9.899226 CAAATCAAAAACCAAACCAAAAACTAA 57.101 25.926 0.00 0.00 0.00 2.24
8518 11162 8.515414 CCAAATCAAAAACCAAACCAAAAACTA 58.485 29.630 0.00 0.00 0.00 2.24
8519 11163 7.014711 ACCAAATCAAAAACCAAACCAAAAACT 59.985 29.630 0.00 0.00 0.00 2.66
8520 11164 7.148641 ACCAAATCAAAAACCAAACCAAAAAC 58.851 30.769 0.00 0.00 0.00 2.43
8521 11165 7.231519 AGACCAAATCAAAAACCAAACCAAAAA 59.768 29.630 0.00 0.00 0.00 1.94
8522 11166 6.717084 AGACCAAATCAAAAACCAAACCAAAA 59.283 30.769 0.00 0.00 0.00 2.44
8523 11167 6.241645 AGACCAAATCAAAAACCAAACCAAA 58.758 32.000 0.00 0.00 0.00 3.28
8524 11168 5.810095 AGACCAAATCAAAAACCAAACCAA 58.190 33.333 0.00 0.00 0.00 3.67
8525 11169 5.046304 TGAGACCAAATCAAAAACCAAACCA 60.046 36.000 0.00 0.00 0.00 3.67
8526 11170 5.293324 GTGAGACCAAATCAAAAACCAAACC 59.707 40.000 0.00 0.00 0.00 3.27
8527 11171 6.106003 AGTGAGACCAAATCAAAAACCAAAC 58.894 36.000 0.00 0.00 0.00 2.93
8528 11172 6.293004 AGTGAGACCAAATCAAAAACCAAA 57.707 33.333 0.00 0.00 0.00 3.28
8529 11173 5.930837 AGTGAGACCAAATCAAAAACCAA 57.069 34.783 0.00 0.00 0.00 3.67
8530 11174 6.126409 ACTAGTGAGACCAAATCAAAAACCA 58.874 36.000 0.00 0.00 0.00 3.67
8531 11175 6.635030 ACTAGTGAGACCAAATCAAAAACC 57.365 37.500 0.00 0.00 0.00 3.27
8532 11176 7.435192 CCAAACTAGTGAGACCAAATCAAAAAC 59.565 37.037 0.00 0.00 0.00 2.43
8533 11177 7.123547 ACCAAACTAGTGAGACCAAATCAAAAA 59.876 33.333 0.00 0.00 0.00 1.94
8534 11178 6.605594 ACCAAACTAGTGAGACCAAATCAAAA 59.394 34.615 0.00 0.00 0.00 2.44
8535 11179 6.126409 ACCAAACTAGTGAGACCAAATCAAA 58.874 36.000 0.00 0.00 0.00 2.69
8536 11180 5.690865 ACCAAACTAGTGAGACCAAATCAA 58.309 37.500 0.00 0.00 0.00 2.57
8537 11181 5.071788 AGACCAAACTAGTGAGACCAAATCA 59.928 40.000 0.00 0.00 0.00 2.57
8538 11182 5.552178 AGACCAAACTAGTGAGACCAAATC 58.448 41.667 0.00 0.00 0.00 2.17
8539 11183 5.308237 AGAGACCAAACTAGTGAGACCAAAT 59.692 40.000 0.00 0.00 0.00 2.32
8540 11184 4.654262 AGAGACCAAACTAGTGAGACCAAA 59.346 41.667 0.00 0.00 0.00 3.28
8541 11185 4.223953 AGAGACCAAACTAGTGAGACCAA 58.776 43.478 0.00 0.00 0.00 3.67
8542 11186 3.845860 AGAGACCAAACTAGTGAGACCA 58.154 45.455 0.00 0.00 0.00 4.02
8543 11187 5.011586 AGTAGAGACCAAACTAGTGAGACC 58.988 45.833 0.00 0.00 0.00 3.85
8544 11188 5.106078 CCAGTAGAGACCAAACTAGTGAGAC 60.106 48.000 0.00 0.00 40.43 3.36
8545 11189 5.010933 CCAGTAGAGACCAAACTAGTGAGA 58.989 45.833 0.00 0.00 40.43 3.27
8546 11190 5.010933 TCCAGTAGAGACCAAACTAGTGAG 58.989 45.833 0.00 0.00 40.43 3.51
8547 11191 4.994282 TCCAGTAGAGACCAAACTAGTGA 58.006 43.478 0.00 0.00 40.43 3.41
8548 11192 5.923733 ATCCAGTAGAGACCAAACTAGTG 57.076 43.478 0.00 0.00 38.80 2.74
8549 11193 6.936968 AAATCCAGTAGAGACCAAACTAGT 57.063 37.500 0.00 0.00 0.00 2.57
8550 11194 8.294954 TCTAAATCCAGTAGAGACCAAACTAG 57.705 38.462 0.00 0.00 0.00 2.57
8551 11195 8.840200 ATCTAAATCCAGTAGAGACCAAACTA 57.160 34.615 0.00 0.00 31.27 2.24
8552 11196 7.741554 ATCTAAATCCAGTAGAGACCAAACT 57.258 36.000 0.00 0.00 31.27 2.66
8553 11197 8.915036 TCTATCTAAATCCAGTAGAGACCAAAC 58.085 37.037 0.00 0.00 31.27 2.93
8554 11198 8.915036 GTCTATCTAAATCCAGTAGAGACCAAA 58.085 37.037 0.00 0.00 31.27 3.28
8555 11199 8.059461 TGTCTATCTAAATCCAGTAGAGACCAA 58.941 37.037 0.00 0.00 31.27 3.67
8556 11200 7.583625 TGTCTATCTAAATCCAGTAGAGACCA 58.416 38.462 0.00 0.00 31.27 4.02
8557 11201 8.466617 TTGTCTATCTAAATCCAGTAGAGACC 57.533 38.462 0.00 0.00 31.27 3.85
8558 11202 9.738832 GTTTGTCTATCTAAATCCAGTAGAGAC 57.261 37.037 0.00 0.00 31.27 3.36
8559 11203 9.475620 TGTTTGTCTATCTAAATCCAGTAGAGA 57.524 33.333 0.00 0.00 31.27 3.10
8565 11209 9.793252 CCAAATTGTTTGTCTATCTAAATCCAG 57.207 33.333 2.22 0.00 38.98 3.86
8566 11210 9.308000 ACCAAATTGTTTGTCTATCTAAATCCA 57.692 29.630 2.22 0.00 38.98 3.41
8569 11213 9.840427 CGAACCAAATTGTTTGTCTATCTAAAT 57.160 29.630 2.22 0.00 38.98 1.40
8570 11214 8.293867 CCGAACCAAATTGTTTGTCTATCTAAA 58.706 33.333 2.22 0.00 38.98 1.85
8571 11215 7.446013 ACCGAACCAAATTGTTTGTCTATCTAA 59.554 33.333 2.22 0.00 38.98 2.10
8572 11216 6.938030 ACCGAACCAAATTGTTTGTCTATCTA 59.062 34.615 2.22 0.00 38.98 1.98
8573 11217 5.768164 ACCGAACCAAATTGTTTGTCTATCT 59.232 36.000 2.22 0.00 38.98 1.98
8574 11218 6.009115 ACCGAACCAAATTGTTTGTCTATC 57.991 37.500 2.22 0.00 38.98 2.08
8575 11219 6.399639 AACCGAACCAAATTGTTTGTCTAT 57.600 33.333 2.22 0.00 38.98 1.98
8576 11220 5.838531 AACCGAACCAAATTGTTTGTCTA 57.161 34.783 2.22 0.00 38.98 2.59
8577 11221 4.729227 AACCGAACCAAATTGTTTGTCT 57.271 36.364 2.22 0.00 38.98 3.41
8578 11222 4.865365 TCAAACCGAACCAAATTGTTTGTC 59.135 37.500 11.71 0.00 43.71 3.18
8579 11223 4.822026 TCAAACCGAACCAAATTGTTTGT 58.178 34.783 11.71 0.00 43.71 2.83
8580 11224 4.867608 ACTCAAACCGAACCAAATTGTTTG 59.132 37.500 7.00 7.00 44.31 2.93
8581 11225 5.079689 ACTCAAACCGAACCAAATTGTTT 57.920 34.783 0.00 0.00 0.00 2.83
8582 11226 4.729227 ACTCAAACCGAACCAAATTGTT 57.271 36.364 0.00 0.00 0.00 2.83
8583 11227 4.081917 ACAACTCAAACCGAACCAAATTGT 60.082 37.500 0.00 0.00 0.00 2.71
8584 11228 4.267452 CACAACTCAAACCGAACCAAATTG 59.733 41.667 0.00 0.00 0.00 2.32
8585 11229 4.429108 CACAACTCAAACCGAACCAAATT 58.571 39.130 0.00 0.00 0.00 1.82
8586 11230 3.181480 CCACAACTCAAACCGAACCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
8587 11231 2.164624 CCACAACTCAAACCGAACCAAA 59.835 45.455 0.00 0.00 0.00 3.28
8588 11232 1.746220 CCACAACTCAAACCGAACCAA 59.254 47.619 0.00 0.00 0.00 3.67
8589 11233 1.384525 CCACAACTCAAACCGAACCA 58.615 50.000 0.00 0.00 0.00 3.67
8590 11234 0.030235 GCCACAACTCAAACCGAACC 59.970 55.000 0.00 0.00 0.00 3.62
8591 11235 1.021968 AGCCACAACTCAAACCGAAC 58.978 50.000 0.00 0.00 0.00 3.95
8592 11236 2.623878 TAGCCACAACTCAAACCGAA 57.376 45.000 0.00 0.00 0.00 4.30
8593 11237 2.623878 TTAGCCACAACTCAAACCGA 57.376 45.000 0.00 0.00 0.00 4.69
8594 11238 4.668177 CGTTATTAGCCACAACTCAAACCG 60.668 45.833 0.00 0.00 0.00 4.44
8595 11239 4.379082 CCGTTATTAGCCACAACTCAAACC 60.379 45.833 0.00 0.00 0.00 3.27
8596 11240 4.453136 TCCGTTATTAGCCACAACTCAAAC 59.547 41.667 0.00 0.00 0.00 2.93
8597 11241 4.643463 TCCGTTATTAGCCACAACTCAAA 58.357 39.130 0.00 0.00 0.00 2.69
8598 11242 4.274602 TCCGTTATTAGCCACAACTCAA 57.725 40.909 0.00 0.00 0.00 3.02
8599 11243 3.965379 TCCGTTATTAGCCACAACTCA 57.035 42.857 0.00 0.00 0.00 3.41
8600 11244 4.035208 CCAATCCGTTATTAGCCACAACTC 59.965 45.833 0.00 0.00 0.00 3.01
8601 11245 3.945285 CCAATCCGTTATTAGCCACAACT 59.055 43.478 0.00 0.00 0.00 3.16
8602 11246 3.942748 TCCAATCCGTTATTAGCCACAAC 59.057 43.478 0.00 0.00 0.00 3.32
8603 11247 4.223556 TCCAATCCGTTATTAGCCACAA 57.776 40.909 0.00 0.00 0.00 3.33
8604 11248 3.916359 TCCAATCCGTTATTAGCCACA 57.084 42.857 0.00 0.00 0.00 4.17
8605 11249 5.938125 ACATATCCAATCCGTTATTAGCCAC 59.062 40.000 0.00 0.00 0.00 5.01
8606 11250 6.121776 ACATATCCAATCCGTTATTAGCCA 57.878 37.500 0.00 0.00 0.00 4.75
8607 11251 7.448748 AAACATATCCAATCCGTTATTAGCC 57.551 36.000 0.00 0.00 0.00 3.93
8608 11252 8.665685 CCTAAACATATCCAATCCGTTATTAGC 58.334 37.037 0.00 0.00 0.00 3.09
8609 11253 9.720769 ACCTAAACATATCCAATCCGTTATTAG 57.279 33.333 0.00 0.00 0.00 1.73
8611 11255 8.846211 CAACCTAAACATATCCAATCCGTTATT 58.154 33.333 0.00 0.00 0.00 1.40
8612 11256 7.447238 CCAACCTAAACATATCCAATCCGTTAT 59.553 37.037 0.00 0.00 0.00 1.89
8613 11257 6.768861 CCAACCTAAACATATCCAATCCGTTA 59.231 38.462 0.00 0.00 0.00 3.18
8614 11258 5.592688 CCAACCTAAACATATCCAATCCGTT 59.407 40.000 0.00 0.00 0.00 4.44
8615 11259 5.130350 CCAACCTAAACATATCCAATCCGT 58.870 41.667 0.00 0.00 0.00 4.69
8616 11260 4.518970 CCCAACCTAAACATATCCAATCCG 59.481 45.833 0.00 0.00 0.00 4.18
8617 11261 5.301805 CACCCAACCTAAACATATCCAATCC 59.698 44.000 0.00 0.00 0.00 3.01
8618 11262 5.221244 GCACCCAACCTAAACATATCCAATC 60.221 44.000 0.00 0.00 0.00 2.67
8619 11263 4.649218 GCACCCAACCTAAACATATCCAAT 59.351 41.667 0.00 0.00 0.00 3.16
8620 11264 4.020543 GCACCCAACCTAAACATATCCAA 58.979 43.478 0.00 0.00 0.00 3.53
8621 11265 3.010696 TGCACCCAACCTAAACATATCCA 59.989 43.478 0.00 0.00 0.00 3.41
8622 11266 3.626930 TGCACCCAACCTAAACATATCC 58.373 45.455 0.00 0.00 0.00 2.59
8623 11267 4.335594 GTCTGCACCCAACCTAAACATATC 59.664 45.833 0.00 0.00 0.00 1.63
8624 11268 4.018415 AGTCTGCACCCAACCTAAACATAT 60.018 41.667 0.00 0.00 0.00 1.78
8625 11269 3.329520 AGTCTGCACCCAACCTAAACATA 59.670 43.478 0.00 0.00 0.00 2.29
8626 11270 2.108250 AGTCTGCACCCAACCTAAACAT 59.892 45.455 0.00 0.00 0.00 2.71
8627 11271 1.493022 AGTCTGCACCCAACCTAAACA 59.507 47.619 0.00 0.00 0.00 2.83
8628 11272 2.271944 AGTCTGCACCCAACCTAAAC 57.728 50.000 0.00 0.00 0.00 2.01
8629 11273 4.331968 CATAAGTCTGCACCCAACCTAAA 58.668 43.478 0.00 0.00 0.00 1.85
8630 11274 3.308117 CCATAAGTCTGCACCCAACCTAA 60.308 47.826 0.00 0.00 0.00 2.69
8631 11275 2.238646 CCATAAGTCTGCACCCAACCTA 59.761 50.000 0.00 0.00 0.00 3.08
8632 11276 1.004745 CCATAAGTCTGCACCCAACCT 59.995 52.381 0.00 0.00 0.00 3.50
8633 11277 1.463674 CCATAAGTCTGCACCCAACC 58.536 55.000 0.00 0.00 0.00 3.77
8634 11278 1.271926 ACCCATAAGTCTGCACCCAAC 60.272 52.381 0.00 0.00 0.00 3.77
8635 11279 1.072266 ACCCATAAGTCTGCACCCAA 58.928 50.000 0.00 0.00 0.00 4.12
8636 11280 1.072266 AACCCATAAGTCTGCACCCA 58.928 50.000 0.00 0.00 0.00 4.51
8637 11281 1.004277 TCAACCCATAAGTCTGCACCC 59.996 52.381 0.00 0.00 0.00 4.61
8638 11282 2.489938 TCAACCCATAAGTCTGCACC 57.510 50.000 0.00 0.00 0.00 5.01
8639 11283 4.278419 AGTTTTCAACCCATAAGTCTGCAC 59.722 41.667 0.00 0.00 0.00 4.57
8640 11284 4.278170 CAGTTTTCAACCCATAAGTCTGCA 59.722 41.667 0.00 0.00 0.00 4.41
8641 11285 4.278419 ACAGTTTTCAACCCATAAGTCTGC 59.722 41.667 0.00 0.00 0.00 4.26
8642 11286 6.208644 CAACAGTTTTCAACCCATAAGTCTG 58.791 40.000 0.00 0.00 0.00 3.51
8643 11287 5.221244 GCAACAGTTTTCAACCCATAAGTCT 60.221 40.000 0.00 0.00 0.00 3.24
8644 11288 4.982295 GCAACAGTTTTCAACCCATAAGTC 59.018 41.667 0.00 0.00 0.00 3.01
8645 11289 4.404073 TGCAACAGTTTTCAACCCATAAGT 59.596 37.500 0.00 0.00 0.00 2.24
8646 11290 4.942852 TGCAACAGTTTTCAACCCATAAG 58.057 39.130 0.00 0.00 0.00 1.73
8647 11291 5.344743 TTGCAACAGTTTTCAACCCATAA 57.655 34.783 0.00 0.00 0.00 1.90
8649 11293 3.902881 TTGCAACAGTTTTCAACCCAT 57.097 38.095 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.