Multiple sequence alignment - TraesCS2A01G233300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G233300 chr2A 100.000 6665 0 0 1 6665 278420763 278414099 0.000000e+00 12309.0
1 TraesCS2A01G233300 chr2A 93.548 93 6 0 350 442 245451331 245451239 9.010000e-29 139.0
2 TraesCS2A01G233300 chr2A 100.000 43 0 0 2925 2967 278417776 278417734 5.540000e-11 80.5
3 TraesCS2A01G233300 chr2A 100.000 43 0 0 2988 3030 278417839 278417797 5.540000e-11 80.5
4 TraesCS2A01G233300 chr2B 95.911 3424 88 23 1583 5001 259030671 259034047 0.000000e+00 5500.0
5 TraesCS2A01G233300 chr2B 89.684 1299 49 23 5039 6283 259034053 259035320 0.000000e+00 1578.0
6 TraesCS2A01G233300 chr2B 91.817 1161 34 13 462 1608 259029553 259030666 0.000000e+00 1561.0
7 TraesCS2A01G233300 chr2B 92.157 306 19 2 6365 6665 259035383 259035688 1.720000e-115 427.0
8 TraesCS2A01G233300 chr2B 92.857 238 14 3 3010 3246 259031823 259032058 6.400000e-90 342.0
9 TraesCS2A01G233300 chr2B 89.773 176 9 4 2740 2914 259032065 259032232 4.050000e-52 217.0
10 TraesCS2A01G233300 chr2D 94.624 2325 73 14 632 2926 205005091 205007393 0.000000e+00 3554.0
11 TraesCS2A01G233300 chr2D 96.696 2028 58 5 3010 5031 205007207 205009231 0.000000e+00 3365.0
12 TraesCS2A01G233300 chr2D 93.923 1086 27 9 5088 6142 205009251 205010328 0.000000e+00 1604.0
13 TraesCS2A01G233300 chr2D 92.941 340 19 2 6331 6665 205010615 205010954 2.160000e-134 490.0
14 TraesCS2A01G233300 chr2D 95.133 226 10 1 124 349 119417795 119417571 8.220000e-94 355.0
15 TraesCS2A01G233300 chr2D 95.111 225 10 1 125 349 472431114 472431337 2.960000e-93 353.0
16 TraesCS2A01G233300 chr2D 91.971 137 3 2 501 637 205004783 205004911 1.140000e-42 185.0
17 TraesCS2A01G233300 chr2D 96.364 55 2 0 462 516 205004717 205004771 2.560000e-14 91.6
18 TraesCS2A01G233300 chr4A 93.146 963 59 4 3603 4559 713262352 713263313 0.000000e+00 1406.0
19 TraesCS2A01G233300 chr4A 92.903 930 59 4 3603 4526 713252285 713253213 0.000000e+00 1345.0
20 TraesCS2A01G233300 chr4A 94.763 611 29 3 3040 3648 713251682 713252291 0.000000e+00 948.0
21 TraesCS2A01G233300 chr4A 94.763 611 29 3 3040 3648 713261749 713262358 0.000000e+00 948.0
22 TraesCS2A01G233300 chr4A 92.373 236 16 1 2670 2905 713251451 713251684 1.070000e-87 335.0
23 TraesCS2A01G233300 chr4A 92.373 236 16 1 2670 2905 713261518 713261751 1.070000e-87 335.0
24 TraesCS2A01G233300 chr4A 97.500 120 2 1 2548 2667 713251297 713251415 3.150000e-48 204.0
25 TraesCS2A01G233300 chr4A 97.500 120 2 1 2548 2667 713261364 713261482 3.150000e-48 204.0
26 TraesCS2A01G233300 chr4D 95.425 612 25 3 3040 3648 469151305 469151916 0.000000e+00 972.0
27 TraesCS2A01G233300 chr4D 95.395 608 26 2 3043 3648 409475576 409474969 0.000000e+00 966.0
28 TraesCS2A01G233300 chr4D 92.891 422 27 1 3603 4021 409474935 409474514 1.590000e-170 610.0
29 TraesCS2A01G233300 chr4D 91.449 421 27 7 3603 4021 469151910 469152323 2.700000e-158 569.0
30 TraesCS2A01G233300 chr4D 93.575 358 19 2 2548 2905 469150954 469151307 1.270000e-146 531.0
31 TraesCS2A01G233300 chr4D 94.955 337 17 0 4223 4559 469152321 469152657 4.580000e-146 529.0
32 TraesCS2A01G233300 chr4D 93.296 358 21 2 2548 2905 409475931 409475577 5.920000e-145 525.0
33 TraesCS2A01G233300 chr4D 94.362 337 19 0 4223 4559 409474516 409474180 9.910000e-143 518.0
34 TraesCS2A01G233300 chr4D 92.473 93 7 0 350 442 41747094 41747002 4.190000e-27 134.0
35 TraesCS2A01G233300 chr4D 92.473 93 7 0 350 442 62507261 62507169 4.190000e-27 134.0
36 TraesCS2A01G233300 chr3D 95.090 611 28 2 3040 3648 323770306 323770916 0.000000e+00 961.0
37 TraesCS2A01G233300 chr3D 95.113 532 25 1 3040 3570 323778341 323778872 0.000000e+00 837.0
38 TraesCS2A01G233300 chr3D 92.671 423 26 3 3603 4021 323770910 323771331 7.390000e-169 604.0
39 TraesCS2A01G233300 chr3D 94.134 358 18 2 2548 2905 323769954 323770308 5.880000e-150 542.0
40 TraesCS2A01G233300 chr3D 94.134 358 18 2 2548 2905 323777989 323778343 5.880000e-150 542.0
41 TraesCS2A01G233300 chr3D 94.362 337 19 0 4223 4559 323771329 323771665 9.910000e-143 518.0
42 TraesCS2A01G233300 chr3D 93.939 231 13 1 119 349 560926687 560926916 1.380000e-91 348.0
43 TraesCS2A01G233300 chr3D 83.838 99 12 4 6340 6435 25312641 25312738 2.560000e-14 91.6
44 TraesCS2A01G233300 chr5D 94.608 612 29 4 3040 3648 377303868 377304478 0.000000e+00 944.0
45 TraesCS2A01G233300 chr5D 92.857 630 35 7 3603 4224 377304512 377305139 0.000000e+00 905.0
46 TraesCS2A01G233300 chr5D 93.855 358 19 2 2548 2905 377303516 377303870 2.740000e-148 536.0
47 TraesCS2A01G233300 chr6A 89.164 323 33 2 121 442 162999242 162999563 1.040000e-107 401.0
48 TraesCS2A01G233300 chr7D 94.760 229 11 1 121 349 550352932 550353159 8.220000e-94 355.0
49 TraesCS2A01G233300 chr5B 95.133 226 10 1 124 349 407637273 407637049 8.220000e-94 355.0
50 TraesCS2A01G233300 chr6D 94.348 230 12 1 121 350 352086395 352086623 1.060000e-92 351.0
51 TraesCS2A01G233300 chr6D 92.473 93 7 0 350 442 381599093 381599001 4.190000e-27 134.0
52 TraesCS2A01G233300 chr6D 92.473 93 7 0 350 442 442924231 442924139 4.190000e-27 134.0
53 TraesCS2A01G233300 chr5A 94.323 229 12 1 121 349 154554936 154555163 3.820000e-92 350.0
54 TraesCS2A01G233300 chr1D 94.323 229 12 1 121 349 427590911 427591138 3.820000e-92 350.0
55 TraesCS2A01G233300 chr1D 97.581 124 3 0 1 124 264883936 264884059 5.240000e-51 213.0
56 TraesCS2A01G233300 chr1D 97.581 124 3 0 1 124 306181991 306181868 5.240000e-51 213.0
57 TraesCS2A01G233300 chr1D 97.581 124 3 0 1 124 337137854 337137731 5.240000e-51 213.0
58 TraesCS2A01G233300 chr1D 92.473 93 7 0 350 442 435193522 435193430 4.190000e-27 134.0
59 TraesCS2A01G233300 chrUn 98.387 124 2 0 1 124 12979424 12979547 1.130000e-52 219.0
60 TraesCS2A01G233300 chrUn 97.581 124 3 0 1 124 261288965 261288842 5.240000e-51 213.0
61 TraesCS2A01G233300 chrUn 97.581 124 3 0 1 124 405233617 405233494 5.240000e-51 213.0
62 TraesCS2A01G233300 chr6B 98.387 124 2 0 1 124 553986362 553986239 1.130000e-52 219.0
63 TraesCS2A01G233300 chr3A 98.387 124 2 0 1 124 2886884 2887007 1.130000e-52 219.0
64 TraesCS2A01G233300 chr3A 91.000 100 9 0 350 449 734166368 734166467 1.170000e-27 135.0
65 TraesCS2A01G233300 chr7B 98.361 122 2 0 3 124 344697548 344697669 1.460000e-51 215.0
66 TraesCS2A01G233300 chr7B 93.548 93 6 0 350 442 505688592 505688500 9.010000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G233300 chr2A 278414099 278420763 6664 True 4156.666667 12309 100.000000 1 6665 3 chr2A.!!$R2 6664
1 TraesCS2A01G233300 chr2B 259029553 259035688 6135 False 1604.166667 5500 92.033167 462 6665 6 chr2B.!!$F1 6203
2 TraesCS2A01G233300 chr2D 205004717 205010954 6237 False 1548.266667 3554 94.419833 462 6665 6 chr2D.!!$F2 6203
3 TraesCS2A01G233300 chr4A 713261364 713263313 1949 False 723.250000 1406 94.445500 2548 4559 4 chr4A.!!$F2 2011
4 TraesCS2A01G233300 chr4A 713251297 713253213 1916 False 708.000000 1345 94.384750 2548 4526 4 chr4A.!!$F1 1978
5 TraesCS2A01G233300 chr4D 409474180 409475931 1751 True 654.750000 966 93.986000 2548 4559 4 chr4D.!!$R3 2011
6 TraesCS2A01G233300 chr4D 469150954 469152657 1703 False 650.250000 972 93.851000 2548 4559 4 chr4D.!!$F1 2011
7 TraesCS2A01G233300 chr3D 323777989 323778872 883 False 689.500000 837 94.623500 2548 3570 2 chr3D.!!$F4 1022
8 TraesCS2A01G233300 chr3D 323769954 323771665 1711 False 656.250000 961 94.064250 2548 4559 4 chr3D.!!$F3 2011
9 TraesCS2A01G233300 chr5D 377303516 377305139 1623 False 795.000000 944 93.773333 2548 4224 3 chr5D.!!$F1 1676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.032403 TGCTTGTTTGTCATGCCTGC 59.968 50.000 0.00 0.00 43.63 4.85 F
199 200 0.033228 CTAGCCTCTTCCATGCTCGG 59.967 60.000 0.00 0.00 36.57 4.63 F
203 204 0.034616 CCTCTTCCATGCTCGGATCC 59.965 60.000 0.00 0.00 34.19 3.36 F
377 378 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.000 0.00 0.00 0.00 2.66 F
708 932 0.179202 CAGCGCCGAGATCTCTATCG 60.179 60.000 20.26 18.88 37.19 2.92 F
948 1187 0.325671 ACCACCACATCCGGAGAGAT 60.326 55.000 11.34 0.00 0.00 2.75 F
2527 2827 0.389166 CACTCTCTGAAGGTGGCGAC 60.389 60.000 0.00 0.00 0.00 5.19 F
4063 4494 2.051334 ACTGTGCTGCAACCTTGTAA 57.949 45.000 2.77 0.00 0.00 2.41 F
4790 5224 1.153005 GCTCCCAGGCCATCTCTTG 60.153 63.158 5.01 0.00 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1507 1771 0.405585 ATATCCCCTGCCGGATTTGG 59.594 55.000 5.05 0.0 39.80 3.28 R
1986 2286 1.003545 CTTCACTGTTGACTTGGCACG 60.004 52.381 0.00 0.0 0.00 5.34 R
1987 2287 1.334869 CCTTCACTGTTGACTTGGCAC 59.665 52.381 0.00 0.0 0.00 5.01 R
1988 2288 1.679139 CCTTCACTGTTGACTTGGCA 58.321 50.000 0.00 0.0 0.00 4.92 R
2473 2773 1.555075 GGTGCCTCATGGAAGACTGTA 59.445 52.381 0.00 0.0 34.57 2.74 R
2817 3151 1.605710 GAACTGCTATCATGCGCCAAT 59.394 47.619 4.18 0.0 35.36 3.16 R
4135 4569 0.178964 CTTGGCCTTGAACTTGGGGA 60.179 55.000 3.32 0.0 0.00 4.81 R
5031 5465 0.032615 TCTCCTCTGAGCCTCTTCCC 60.033 60.000 0.00 0.0 38.58 3.97 R
5711 6186 0.035056 ATCTTGGCGTCAGGGGAAAG 60.035 55.000 0.00 0.0 0.00 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.774742 GTCATTTCCACAGTAAATAGATGAAAC 57.225 33.333 0.00 0.00 0.00 2.78
27 28 8.956426 TCATTTCCACAGTAAATAGATGAAACC 58.044 33.333 0.00 0.00 0.00 3.27
28 29 7.696992 TTTCCACAGTAAATAGATGAAACCC 57.303 36.000 0.00 0.00 0.00 4.11
29 30 6.381498 TCCACAGTAAATAGATGAAACCCA 57.619 37.500 0.00 0.00 0.00 4.51
30 31 6.177610 TCCACAGTAAATAGATGAAACCCAC 58.822 40.000 0.00 0.00 0.00 4.61
31 32 6.012858 TCCACAGTAAATAGATGAAACCCACT 60.013 38.462 0.00 0.00 0.00 4.00
32 33 7.181305 TCCACAGTAAATAGATGAAACCCACTA 59.819 37.037 0.00 0.00 0.00 2.74
33 34 7.495934 CCACAGTAAATAGATGAAACCCACTAG 59.504 40.741 0.00 0.00 0.00 2.57
34 35 7.011482 CACAGTAAATAGATGAAACCCACTAGC 59.989 40.741 0.00 0.00 0.00 3.42
35 36 7.047891 CAGTAAATAGATGAAACCCACTAGCA 58.952 38.462 0.00 0.00 0.00 3.49
36 37 7.716998 CAGTAAATAGATGAAACCCACTAGCAT 59.283 37.037 0.00 0.00 0.00 3.79
37 38 6.949352 AAATAGATGAAACCCACTAGCATG 57.051 37.500 0.00 0.00 0.00 4.06
38 39 5.894298 ATAGATGAAACCCACTAGCATGA 57.106 39.130 0.00 0.00 0.00 3.07
39 40 4.148128 AGATGAAACCCACTAGCATGAG 57.852 45.455 0.00 0.00 0.00 2.90
40 41 3.521126 AGATGAAACCCACTAGCATGAGT 59.479 43.478 0.00 0.00 0.00 3.41
41 42 4.716784 AGATGAAACCCACTAGCATGAGTA 59.283 41.667 0.00 0.00 0.00 2.59
42 43 4.471904 TGAAACCCACTAGCATGAGTAG 57.528 45.455 0.00 0.00 0.00 2.57
43 44 3.197766 TGAAACCCACTAGCATGAGTAGG 59.802 47.826 0.00 0.00 34.67 3.18
44 45 2.848678 ACCCACTAGCATGAGTAGGA 57.151 50.000 6.11 0.00 32.97 2.94
45 46 2.672098 ACCCACTAGCATGAGTAGGAG 58.328 52.381 6.11 0.12 32.97 3.69
46 47 2.023888 ACCCACTAGCATGAGTAGGAGT 60.024 50.000 6.11 0.00 32.97 3.85
47 48 3.034635 CCCACTAGCATGAGTAGGAGTT 58.965 50.000 0.00 0.00 30.40 3.01
48 49 3.181471 CCCACTAGCATGAGTAGGAGTTG 60.181 52.174 0.00 0.00 30.40 3.16
49 50 3.449018 CCACTAGCATGAGTAGGAGTTGT 59.551 47.826 0.00 0.00 0.00 3.32
50 51 4.081420 CCACTAGCATGAGTAGGAGTTGTT 60.081 45.833 0.00 0.00 0.00 2.83
51 52 5.482908 CACTAGCATGAGTAGGAGTTGTTT 58.517 41.667 0.00 0.00 0.00 2.83
52 53 5.349817 CACTAGCATGAGTAGGAGTTGTTTG 59.650 44.000 0.00 0.00 0.00 2.93
53 54 4.623932 AGCATGAGTAGGAGTTGTTTGA 57.376 40.909 0.00 0.00 0.00 2.69
54 55 4.573900 AGCATGAGTAGGAGTTGTTTGAG 58.426 43.478 0.00 0.00 0.00 3.02
55 56 3.126000 GCATGAGTAGGAGTTGTTTGAGC 59.874 47.826 0.00 0.00 0.00 4.26
56 57 4.573900 CATGAGTAGGAGTTGTTTGAGCT 58.426 43.478 0.00 0.00 0.00 4.09
57 58 4.258702 TGAGTAGGAGTTGTTTGAGCTC 57.741 45.455 6.82 6.82 0.00 4.09
58 59 3.898123 TGAGTAGGAGTTGTTTGAGCTCT 59.102 43.478 16.19 0.00 0.00 4.09
59 60 4.241681 GAGTAGGAGTTGTTTGAGCTCTG 58.758 47.826 16.19 0.00 0.00 3.35
60 61 3.898123 AGTAGGAGTTGTTTGAGCTCTGA 59.102 43.478 16.19 0.25 0.00 3.27
61 62 4.530161 AGTAGGAGTTGTTTGAGCTCTGAT 59.470 41.667 16.19 0.00 0.00 2.90
62 63 3.672808 AGGAGTTGTTTGAGCTCTGATG 58.327 45.455 16.19 0.00 0.00 3.07
63 64 3.072184 AGGAGTTGTTTGAGCTCTGATGT 59.928 43.478 16.19 0.00 0.00 3.06
64 65 3.188048 GGAGTTGTTTGAGCTCTGATGTG 59.812 47.826 16.19 0.00 0.00 3.21
65 66 2.551459 AGTTGTTTGAGCTCTGATGTGC 59.449 45.455 16.19 0.20 0.00 4.57
66 67 1.527034 TGTTTGAGCTCTGATGTGCC 58.473 50.000 16.19 0.00 33.59 5.01
67 68 1.072806 TGTTTGAGCTCTGATGTGCCT 59.927 47.619 16.19 0.00 33.59 4.75
68 69 2.302733 TGTTTGAGCTCTGATGTGCCTA 59.697 45.455 16.19 0.00 33.59 3.93
69 70 2.675348 GTTTGAGCTCTGATGTGCCTAC 59.325 50.000 16.19 0.00 33.59 3.18
70 71 1.857965 TGAGCTCTGATGTGCCTACT 58.142 50.000 16.19 0.00 33.59 2.57
71 72 1.753649 TGAGCTCTGATGTGCCTACTC 59.246 52.381 16.19 0.00 33.59 2.59
72 73 1.753649 GAGCTCTGATGTGCCTACTCA 59.246 52.381 6.43 0.00 33.59 3.41
73 74 2.364970 GAGCTCTGATGTGCCTACTCAT 59.635 50.000 6.43 0.00 33.59 2.90
74 75 2.770802 AGCTCTGATGTGCCTACTCATT 59.229 45.455 0.00 0.00 33.59 2.57
75 76 3.129871 GCTCTGATGTGCCTACTCATTC 58.870 50.000 0.00 0.00 30.33 2.67
76 77 3.431346 GCTCTGATGTGCCTACTCATTCA 60.431 47.826 0.00 0.00 30.33 2.57
77 78 4.743045 GCTCTGATGTGCCTACTCATTCAT 60.743 45.833 0.00 0.00 30.33 2.57
78 79 4.700700 TCTGATGTGCCTACTCATTCATG 58.299 43.478 0.00 0.00 30.33 3.07
79 80 3.208594 TGATGTGCCTACTCATTCATGC 58.791 45.455 0.00 0.00 30.33 4.06
80 81 3.118149 TGATGTGCCTACTCATTCATGCT 60.118 43.478 0.00 0.00 30.33 3.79
81 82 3.354948 TGTGCCTACTCATTCATGCTT 57.645 42.857 0.00 0.00 0.00 3.91
82 83 3.011818 TGTGCCTACTCATTCATGCTTG 58.988 45.455 0.00 0.00 0.00 4.01
83 84 3.012518 GTGCCTACTCATTCATGCTTGT 58.987 45.455 0.00 0.00 0.00 3.16
84 85 3.441572 GTGCCTACTCATTCATGCTTGTT 59.558 43.478 0.00 0.00 0.00 2.83
85 86 4.081406 TGCCTACTCATTCATGCTTGTTT 58.919 39.130 0.00 0.00 0.00 2.83
86 87 4.082625 TGCCTACTCATTCATGCTTGTTTG 60.083 41.667 0.00 0.00 0.00 2.93
87 88 4.082571 GCCTACTCATTCATGCTTGTTTGT 60.083 41.667 0.00 0.00 0.00 2.83
88 89 5.634896 CCTACTCATTCATGCTTGTTTGTC 58.365 41.667 0.00 0.00 0.00 3.18
89 90 5.181811 CCTACTCATTCATGCTTGTTTGTCA 59.818 40.000 0.00 0.00 0.00 3.58
90 91 5.717078 ACTCATTCATGCTTGTTTGTCAT 57.283 34.783 0.00 0.00 0.00 3.06
91 92 5.466819 ACTCATTCATGCTTGTTTGTCATG 58.533 37.500 0.00 0.00 39.02 3.07
92 93 4.239304 TCATTCATGCTTGTTTGTCATGC 58.761 39.130 0.00 0.00 44.24 4.06
93 94 2.728690 TCATGCTTGTTTGTCATGCC 57.271 45.000 0.00 0.00 43.63 4.40
94 95 2.241160 TCATGCTTGTTTGTCATGCCT 58.759 42.857 0.00 0.00 43.63 4.75
95 96 2.029739 TCATGCTTGTTTGTCATGCCTG 60.030 45.455 0.00 0.00 43.63 4.85
96 97 0.032403 TGCTTGTTTGTCATGCCTGC 59.968 50.000 0.00 0.00 43.63 4.85
97 98 0.316204 GCTTGTTTGTCATGCCTGCT 59.684 50.000 0.00 0.00 40.07 4.24
98 99 1.541147 GCTTGTTTGTCATGCCTGCTA 59.459 47.619 0.00 0.00 40.07 3.49
99 100 2.669391 GCTTGTTTGTCATGCCTGCTAC 60.669 50.000 0.00 0.00 40.07 3.58
100 101 2.566833 TGTTTGTCATGCCTGCTACT 57.433 45.000 0.00 0.00 0.00 2.57
101 102 3.694043 TGTTTGTCATGCCTGCTACTA 57.306 42.857 0.00 0.00 0.00 1.82
102 103 3.334691 TGTTTGTCATGCCTGCTACTAC 58.665 45.455 0.00 0.00 0.00 2.73
103 104 3.007940 TGTTTGTCATGCCTGCTACTACT 59.992 43.478 0.00 0.00 0.00 2.57
104 105 3.981071 TTGTCATGCCTGCTACTACTT 57.019 42.857 0.00 0.00 0.00 2.24
105 106 5.175859 GTTTGTCATGCCTGCTACTACTTA 58.824 41.667 0.00 0.00 0.00 2.24
106 107 4.655762 TGTCATGCCTGCTACTACTTAG 57.344 45.455 0.00 0.00 0.00 2.18
107 108 4.278310 TGTCATGCCTGCTACTACTTAGA 58.722 43.478 0.00 0.00 0.00 2.10
108 109 4.339530 TGTCATGCCTGCTACTACTTAGAG 59.660 45.833 0.00 0.00 0.00 2.43
109 110 4.339814 GTCATGCCTGCTACTACTTAGAGT 59.660 45.833 0.00 0.00 0.00 3.24
110 111 4.956700 TCATGCCTGCTACTACTTAGAGTT 59.043 41.667 0.00 0.00 0.00 3.01
111 112 4.720649 TGCCTGCTACTACTTAGAGTTG 57.279 45.455 0.00 0.00 0.00 3.16
112 113 4.341487 TGCCTGCTACTACTTAGAGTTGA 58.659 43.478 0.00 0.00 0.00 3.18
113 114 4.399618 TGCCTGCTACTACTTAGAGTTGAG 59.600 45.833 0.00 0.00 0.00 3.02
114 115 4.399934 GCCTGCTACTACTTAGAGTTGAGT 59.600 45.833 0.00 0.00 0.00 3.41
115 116 5.105675 GCCTGCTACTACTTAGAGTTGAGTT 60.106 44.000 0.00 0.00 0.00 3.01
116 117 6.095160 GCCTGCTACTACTTAGAGTTGAGTTA 59.905 42.308 0.00 0.00 0.00 2.24
117 118 7.680113 GCCTGCTACTACTTAGAGTTGAGTTAG 60.680 44.444 0.00 0.00 0.00 2.34
118 119 7.201750 CCTGCTACTACTTAGAGTTGAGTTAGG 60.202 44.444 0.00 0.00 0.00 2.69
119 120 7.173722 TGCTACTACTTAGAGTTGAGTTAGGT 58.826 38.462 0.00 0.00 0.00 3.08
120 121 7.336427 TGCTACTACTTAGAGTTGAGTTAGGTC 59.664 40.741 0.00 0.00 0.00 3.85
121 122 7.553760 GCTACTACTTAGAGTTGAGTTAGGTCT 59.446 40.741 0.00 0.00 0.00 3.85
122 123 7.690952 ACTACTTAGAGTTGAGTTAGGTCTG 57.309 40.000 0.00 0.00 0.00 3.51
123 124 7.460071 ACTACTTAGAGTTGAGTTAGGTCTGA 58.540 38.462 0.00 0.00 0.00 3.27
124 125 6.827586 ACTTAGAGTTGAGTTAGGTCTGAG 57.172 41.667 0.00 0.00 0.00 3.35
125 126 6.544650 ACTTAGAGTTGAGTTAGGTCTGAGA 58.455 40.000 0.00 0.00 0.00 3.27
126 127 6.657541 ACTTAGAGTTGAGTTAGGTCTGAGAG 59.342 42.308 0.00 0.00 0.00 3.20
127 128 4.340617 AGAGTTGAGTTAGGTCTGAGAGG 58.659 47.826 0.00 0.00 0.00 3.69
128 129 3.436243 AGTTGAGTTAGGTCTGAGAGGG 58.564 50.000 0.00 0.00 0.00 4.30
129 130 3.166679 GTTGAGTTAGGTCTGAGAGGGT 58.833 50.000 0.00 0.00 0.00 4.34
130 131 2.808919 TGAGTTAGGTCTGAGAGGGTG 58.191 52.381 0.00 0.00 0.00 4.61
131 132 1.478916 GAGTTAGGTCTGAGAGGGTGC 59.521 57.143 0.00 0.00 0.00 5.01
132 133 1.077993 AGTTAGGTCTGAGAGGGTGCT 59.922 52.381 0.00 0.00 0.00 4.40
133 134 1.903183 GTTAGGTCTGAGAGGGTGCTT 59.097 52.381 0.00 0.00 0.00 3.91
134 135 1.561643 TAGGTCTGAGAGGGTGCTTG 58.438 55.000 0.00 0.00 0.00 4.01
135 136 1.197430 AGGTCTGAGAGGGTGCTTGG 61.197 60.000 0.00 0.00 0.00 3.61
136 137 1.194781 GGTCTGAGAGGGTGCTTGGA 61.195 60.000 0.00 0.00 0.00 3.53
137 138 0.908198 GTCTGAGAGGGTGCTTGGAT 59.092 55.000 0.00 0.00 0.00 3.41
138 139 2.111384 GTCTGAGAGGGTGCTTGGATA 58.889 52.381 0.00 0.00 0.00 2.59
139 140 2.111384 TCTGAGAGGGTGCTTGGATAC 58.889 52.381 0.00 0.00 0.00 2.24
140 141 0.824109 TGAGAGGGTGCTTGGATACG 59.176 55.000 0.00 0.00 42.51 3.06
141 142 0.824759 GAGAGGGTGCTTGGATACGT 59.175 55.000 0.00 0.00 42.51 3.57
142 143 1.207329 GAGAGGGTGCTTGGATACGTT 59.793 52.381 0.00 0.00 42.51 3.99
143 144 1.628846 AGAGGGTGCTTGGATACGTTT 59.371 47.619 0.00 0.00 42.51 3.60
144 145 2.039879 AGAGGGTGCTTGGATACGTTTT 59.960 45.455 0.00 0.00 42.51 2.43
145 146 3.262405 AGAGGGTGCTTGGATACGTTTTA 59.738 43.478 0.00 0.00 42.51 1.52
146 147 3.606687 AGGGTGCTTGGATACGTTTTAG 58.393 45.455 0.00 0.00 42.51 1.85
147 148 3.008704 AGGGTGCTTGGATACGTTTTAGT 59.991 43.478 0.00 0.00 42.51 2.24
148 149 3.373130 GGGTGCTTGGATACGTTTTAGTC 59.627 47.826 0.00 0.00 42.51 2.59
149 150 4.251268 GGTGCTTGGATACGTTTTAGTCT 58.749 43.478 0.00 0.00 42.51 3.24
150 151 4.329256 GGTGCTTGGATACGTTTTAGTCTC 59.671 45.833 0.00 0.00 42.51 3.36
151 152 4.927425 GTGCTTGGATACGTTTTAGTCTCA 59.073 41.667 0.00 0.00 42.51 3.27
152 153 5.581085 GTGCTTGGATACGTTTTAGTCTCAT 59.419 40.000 0.00 0.00 42.51 2.90
153 154 5.580691 TGCTTGGATACGTTTTAGTCTCATG 59.419 40.000 0.00 0.00 42.51 3.07
154 155 5.810587 GCTTGGATACGTTTTAGTCTCATGA 59.189 40.000 0.00 0.00 42.51 3.07
155 156 6.237861 GCTTGGATACGTTTTAGTCTCATGAC 60.238 42.308 0.00 0.00 41.21 3.06
157 158 7.634671 TGGATACGTTTTAGTCTCATGACTA 57.365 36.000 0.00 2.20 46.46 2.59
169 170 6.282199 GTCTCATGACTAAAAGTAGTGGGA 57.718 41.667 0.00 0.00 40.82 4.37
170 171 6.100668 GTCTCATGACTAAAAGTAGTGGGAC 58.899 44.000 0.00 7.84 40.82 4.46
171 172 6.017192 TCTCATGACTAAAAGTAGTGGGACT 58.983 40.000 0.00 0.00 40.82 3.85
172 173 7.122353 GTCTCATGACTAAAAGTAGTGGGACTA 59.878 40.741 13.07 0.00 40.82 2.59
173 174 7.672660 TCTCATGACTAAAAGTAGTGGGACTAA 59.327 37.037 0.00 0.00 40.82 2.24
174 175 8.197592 TCATGACTAAAAGTAGTGGGACTAAA 57.802 34.615 0.00 0.00 40.82 1.85
175 176 8.311836 TCATGACTAAAAGTAGTGGGACTAAAG 58.688 37.037 0.00 0.00 40.82 1.85
176 177 6.461640 TGACTAAAAGTAGTGGGACTAAAGC 58.538 40.000 0.00 0.00 40.82 3.51
177 178 6.269307 TGACTAAAAGTAGTGGGACTAAAGCT 59.731 38.462 0.00 0.00 40.82 3.74
178 179 7.075851 ACTAAAAGTAGTGGGACTAAAGCTT 57.924 36.000 0.00 0.00 39.20 3.74
179 180 6.935208 ACTAAAAGTAGTGGGACTAAAGCTTG 59.065 38.462 0.00 0.00 39.20 4.01
180 181 3.336138 AGTAGTGGGACTAAAGCTTGC 57.664 47.619 0.00 0.00 31.62 4.01
181 182 2.907042 AGTAGTGGGACTAAAGCTTGCT 59.093 45.455 0.00 0.00 31.62 3.91
182 183 4.094476 AGTAGTGGGACTAAAGCTTGCTA 58.906 43.478 0.00 0.00 31.62 3.49
183 184 3.618690 AGTGGGACTAAAGCTTGCTAG 57.381 47.619 0.00 1.12 0.00 3.42
184 185 5.211394 GTAGTGGGACTAAAGCTTGCTAGC 61.211 50.000 12.54 12.54 38.90 3.42
193 194 3.796764 GCTTGCTAGCCTCTTCCAT 57.203 52.632 13.29 0.00 41.74 3.41
194 195 1.307097 GCTTGCTAGCCTCTTCCATG 58.693 55.000 13.29 0.00 41.74 3.66
195 196 1.307097 CTTGCTAGCCTCTTCCATGC 58.693 55.000 13.29 0.00 0.00 4.06
196 197 0.914644 TTGCTAGCCTCTTCCATGCT 59.085 50.000 13.29 0.00 39.10 3.79
197 198 0.467384 TGCTAGCCTCTTCCATGCTC 59.533 55.000 13.29 0.00 36.57 4.26
198 199 0.599728 GCTAGCCTCTTCCATGCTCG 60.600 60.000 2.29 0.00 36.57 5.03
199 200 0.033228 CTAGCCTCTTCCATGCTCGG 59.967 60.000 0.00 0.00 36.57 4.63
200 201 0.397114 TAGCCTCTTCCATGCTCGGA 60.397 55.000 0.00 0.00 36.57 4.55
201 202 1.053264 AGCCTCTTCCATGCTCGGAT 61.053 55.000 0.00 0.00 34.19 4.18
202 203 0.602372 GCCTCTTCCATGCTCGGATC 60.602 60.000 0.00 0.00 34.19 3.36
203 204 0.034616 CCTCTTCCATGCTCGGATCC 59.965 60.000 0.00 0.00 34.19 3.36
204 205 0.755079 CTCTTCCATGCTCGGATCCA 59.245 55.000 13.41 0.00 34.19 3.41
205 206 1.139654 CTCTTCCATGCTCGGATCCAA 59.860 52.381 13.41 0.00 34.19 3.53
206 207 1.559219 TCTTCCATGCTCGGATCCAAA 59.441 47.619 13.41 0.00 34.19 3.28
207 208 2.173356 TCTTCCATGCTCGGATCCAAAT 59.827 45.455 13.41 0.00 34.19 2.32
208 209 3.390967 TCTTCCATGCTCGGATCCAAATA 59.609 43.478 13.41 0.00 34.19 1.40
209 210 3.126001 TCCATGCTCGGATCCAAATAC 57.874 47.619 13.41 0.00 0.00 1.89
210 211 2.705658 TCCATGCTCGGATCCAAATACT 59.294 45.455 13.41 0.00 0.00 2.12
211 212 3.901222 TCCATGCTCGGATCCAAATACTA 59.099 43.478 13.41 0.00 0.00 1.82
212 213 4.346709 TCCATGCTCGGATCCAAATACTAA 59.653 41.667 13.41 0.00 0.00 2.24
213 214 5.063204 CCATGCTCGGATCCAAATACTAAA 58.937 41.667 13.41 0.00 0.00 1.85
214 215 5.180117 CCATGCTCGGATCCAAATACTAAAG 59.820 44.000 13.41 0.00 0.00 1.85
215 216 5.607939 TGCTCGGATCCAAATACTAAAGA 57.392 39.130 13.41 0.00 0.00 2.52
216 217 5.601662 TGCTCGGATCCAAATACTAAAGAG 58.398 41.667 13.41 7.05 0.00 2.85
217 218 5.362717 TGCTCGGATCCAAATACTAAAGAGA 59.637 40.000 13.41 0.00 0.00 3.10
218 219 5.692654 GCTCGGATCCAAATACTAAAGAGAC 59.307 44.000 13.41 0.00 0.00 3.36
219 220 6.461788 GCTCGGATCCAAATACTAAAGAGACT 60.462 42.308 13.41 0.00 0.00 3.24
220 221 7.255520 GCTCGGATCCAAATACTAAAGAGACTA 60.256 40.741 13.41 0.00 0.00 2.59
221 222 8.529424 TCGGATCCAAATACTAAAGAGACTAA 57.471 34.615 13.41 0.00 0.00 2.24
222 223 8.974238 TCGGATCCAAATACTAAAGAGACTAAA 58.026 33.333 13.41 0.00 0.00 1.85
223 224 9.595823 CGGATCCAAATACTAAAGAGACTAAAA 57.404 33.333 13.41 0.00 0.00 1.52
257 258 7.765695 TGAGCATTTATTATCCTCCAAATCC 57.234 36.000 0.00 0.00 0.00 3.01
258 259 7.529555 TGAGCATTTATTATCCTCCAAATCCT 58.470 34.615 0.00 0.00 0.00 3.24
259 260 7.667219 TGAGCATTTATTATCCTCCAAATCCTC 59.333 37.037 0.00 0.00 29.61 3.71
260 261 6.950619 AGCATTTATTATCCTCCAAATCCTCC 59.049 38.462 0.00 0.00 0.00 4.30
261 262 6.721208 GCATTTATTATCCTCCAAATCCTCCA 59.279 38.462 0.00 0.00 0.00 3.86
262 263 7.233348 GCATTTATTATCCTCCAAATCCTCCAA 59.767 37.037 0.00 0.00 0.00 3.53
263 264 9.317827 CATTTATTATCCTCCAAATCCTCCAAT 57.682 33.333 0.00 0.00 0.00 3.16
264 265 9.903190 ATTTATTATCCTCCAAATCCTCCAATT 57.097 29.630 0.00 0.00 0.00 2.32
265 266 8.940397 TTATTATCCTCCAAATCCTCCAATTC 57.060 34.615 0.00 0.00 0.00 2.17
266 267 4.886755 ATCCTCCAAATCCTCCAATTCA 57.113 40.909 0.00 0.00 0.00 2.57
267 268 4.240881 TCCTCCAAATCCTCCAATTCAG 57.759 45.455 0.00 0.00 0.00 3.02
268 269 3.851976 TCCTCCAAATCCTCCAATTCAGA 59.148 43.478 0.00 0.00 0.00 3.27
269 270 4.292041 TCCTCCAAATCCTCCAATTCAGAA 59.708 41.667 0.00 0.00 0.00 3.02
270 271 4.400567 CCTCCAAATCCTCCAATTCAGAAC 59.599 45.833 0.00 0.00 0.00 3.01
271 272 5.259632 CTCCAAATCCTCCAATTCAGAACT 58.740 41.667 0.00 0.00 0.00 3.01
272 273 5.256474 TCCAAATCCTCCAATTCAGAACTC 58.744 41.667 0.00 0.00 0.00 3.01
273 274 4.095483 CCAAATCCTCCAATTCAGAACTCG 59.905 45.833 0.00 0.00 0.00 4.18
274 275 2.386661 TCCTCCAATTCAGAACTCGC 57.613 50.000 0.00 0.00 0.00 5.03
275 276 1.623311 TCCTCCAATTCAGAACTCGCA 59.377 47.619 0.00 0.00 0.00 5.10
276 277 2.237143 TCCTCCAATTCAGAACTCGCAT 59.763 45.455 0.00 0.00 0.00 4.73
277 278 2.353889 CCTCCAATTCAGAACTCGCATG 59.646 50.000 0.00 0.00 0.00 4.06
278 279 3.005554 CTCCAATTCAGAACTCGCATGT 58.994 45.455 0.00 0.00 0.00 3.21
279 280 2.743664 TCCAATTCAGAACTCGCATGTG 59.256 45.455 0.00 0.00 0.00 3.21
280 281 2.485426 CCAATTCAGAACTCGCATGTGT 59.515 45.455 6.09 0.00 0.00 3.72
281 282 3.058016 CCAATTCAGAACTCGCATGTGTT 60.058 43.478 6.09 3.50 34.68 3.32
282 283 4.154015 CCAATTCAGAACTCGCATGTGTTA 59.846 41.667 6.09 0.00 32.29 2.41
283 284 5.334802 CCAATTCAGAACTCGCATGTGTTAA 60.335 40.000 6.09 0.00 32.29 2.01
284 285 5.940192 ATTCAGAACTCGCATGTGTTAAA 57.060 34.783 6.09 1.01 32.29 1.52
285 286 5.743026 TTCAGAACTCGCATGTGTTAAAA 57.257 34.783 6.09 0.00 32.29 1.52
286 287 5.342806 TCAGAACTCGCATGTGTTAAAAG 57.657 39.130 6.09 0.00 32.29 2.27
287 288 4.213270 TCAGAACTCGCATGTGTTAAAAGG 59.787 41.667 6.09 0.00 32.29 3.11
288 289 4.213270 CAGAACTCGCATGTGTTAAAAGGA 59.787 41.667 6.09 0.00 32.29 3.36
289 290 4.452455 AGAACTCGCATGTGTTAAAAGGAG 59.548 41.667 6.09 0.00 32.29 3.69
290 291 4.002906 ACTCGCATGTGTTAAAAGGAGA 57.997 40.909 6.09 0.00 0.00 3.71
291 292 3.997021 ACTCGCATGTGTTAAAAGGAGAG 59.003 43.478 6.09 0.00 0.00 3.20
292 293 3.334691 TCGCATGTGTTAAAAGGAGAGG 58.665 45.455 6.09 0.00 0.00 3.69
293 294 3.007506 TCGCATGTGTTAAAAGGAGAGGA 59.992 43.478 6.09 0.00 0.00 3.71
294 295 3.372206 CGCATGTGTTAAAAGGAGAGGAG 59.628 47.826 0.00 0.00 0.00 3.69
295 296 4.327680 GCATGTGTTAAAAGGAGAGGAGT 58.672 43.478 0.00 0.00 0.00 3.85
296 297 4.762251 GCATGTGTTAAAAGGAGAGGAGTT 59.238 41.667 0.00 0.00 0.00 3.01
297 298 5.938125 GCATGTGTTAAAAGGAGAGGAGTTA 59.062 40.000 0.00 0.00 0.00 2.24
298 299 6.430000 GCATGTGTTAAAAGGAGAGGAGTTAA 59.570 38.462 0.00 0.00 0.00 2.01
299 300 7.040686 GCATGTGTTAAAAGGAGAGGAGTTAAA 60.041 37.037 0.00 0.00 0.00 1.52
300 301 9.014297 CATGTGTTAAAAGGAGAGGAGTTAAAT 57.986 33.333 0.00 0.00 0.00 1.40
301 302 8.391075 TGTGTTAAAAGGAGAGGAGTTAAATG 57.609 34.615 0.00 0.00 0.00 2.32
302 303 8.215050 TGTGTTAAAAGGAGAGGAGTTAAATGA 58.785 33.333 0.00 0.00 0.00 2.57
303 304 9.063615 GTGTTAAAAGGAGAGGAGTTAAATGAA 57.936 33.333 0.00 0.00 0.00 2.57
304 305 9.284968 TGTTAAAAGGAGAGGAGTTAAATGAAG 57.715 33.333 0.00 0.00 0.00 3.02
305 306 9.503399 GTTAAAAGGAGAGGAGTTAAATGAAGA 57.497 33.333 0.00 0.00 0.00 2.87
306 307 9.726438 TTAAAAGGAGAGGAGTTAAATGAAGAG 57.274 33.333 0.00 0.00 0.00 2.85
307 308 7.560796 AAAGGAGAGGAGTTAAATGAAGAGA 57.439 36.000 0.00 0.00 0.00 3.10
308 309 6.790232 AGGAGAGGAGTTAAATGAAGAGAG 57.210 41.667 0.00 0.00 0.00 3.20
309 310 6.498538 AGGAGAGGAGTTAAATGAAGAGAGA 58.501 40.000 0.00 0.00 0.00 3.10
310 311 6.607198 AGGAGAGGAGTTAAATGAAGAGAGAG 59.393 42.308 0.00 0.00 0.00 3.20
311 312 6.605594 GGAGAGGAGTTAAATGAAGAGAGAGA 59.394 42.308 0.00 0.00 0.00 3.10
312 313 7.123547 GGAGAGGAGTTAAATGAAGAGAGAGAA 59.876 40.741 0.00 0.00 0.00 2.87
313 314 8.066612 AGAGGAGTTAAATGAAGAGAGAGAAG 57.933 38.462 0.00 0.00 0.00 2.85
314 315 7.893302 AGAGGAGTTAAATGAAGAGAGAGAAGA 59.107 37.037 0.00 0.00 0.00 2.87
315 316 7.836842 AGGAGTTAAATGAAGAGAGAGAAGAC 58.163 38.462 0.00 0.00 0.00 3.01
316 317 7.673926 AGGAGTTAAATGAAGAGAGAGAAGACT 59.326 37.037 0.00 0.00 0.00 3.24
317 318 8.962679 GGAGTTAAATGAAGAGAGAGAAGACTA 58.037 37.037 0.00 0.00 0.00 2.59
322 323 7.969690 AATGAAGAGAGAGAAGACTAATCCA 57.030 36.000 0.00 0.00 0.00 3.41
323 324 6.767524 TGAAGAGAGAGAAGACTAATCCAC 57.232 41.667 0.00 0.00 0.00 4.02
324 325 6.249192 TGAAGAGAGAGAAGACTAATCCACA 58.751 40.000 0.00 0.00 0.00 4.17
325 326 6.894654 TGAAGAGAGAGAAGACTAATCCACAT 59.105 38.462 0.00 0.00 0.00 3.21
326 327 7.398618 TGAAGAGAGAGAAGACTAATCCACATT 59.601 37.037 0.00 0.00 0.00 2.71
327 328 7.732222 AGAGAGAGAAGACTAATCCACATTT 57.268 36.000 0.00 0.00 0.00 2.32
328 329 8.144862 AGAGAGAGAAGACTAATCCACATTTT 57.855 34.615 0.00 0.00 0.00 1.82
329 330 9.261035 AGAGAGAGAAGACTAATCCACATTTTA 57.739 33.333 0.00 0.00 0.00 1.52
330 331 9.528018 GAGAGAGAAGACTAATCCACATTTTAG 57.472 37.037 0.00 0.00 0.00 1.85
331 332 9.041354 AGAGAGAAGACTAATCCACATTTTAGT 57.959 33.333 0.00 0.00 40.44 2.24
336 337 9.535878 GAAGACTAATCCACATTTTAGTAGAGG 57.464 37.037 0.00 0.00 38.45 3.69
337 338 8.611051 AGACTAATCCACATTTTAGTAGAGGT 57.389 34.615 0.00 0.00 38.45 3.85
338 339 9.710818 AGACTAATCCACATTTTAGTAGAGGTA 57.289 33.333 0.00 0.00 38.45 3.08
339 340 9.747293 GACTAATCCACATTTTAGTAGAGGTAC 57.253 37.037 0.00 0.00 38.45 3.34
340 341 8.702819 ACTAATCCACATTTTAGTAGAGGTACC 58.297 37.037 2.73 2.73 36.99 3.34
341 342 5.945144 TCCACATTTTAGTAGAGGTACCC 57.055 43.478 8.74 0.00 0.00 3.69
342 343 4.718276 TCCACATTTTAGTAGAGGTACCCC 59.282 45.833 8.74 0.00 0.00 4.95
343 344 4.720273 CCACATTTTAGTAGAGGTACCCCT 59.280 45.833 8.74 4.27 46.66 4.79
344 345 5.396436 CCACATTTTAGTAGAGGTACCCCTG 60.396 48.000 8.74 0.00 42.86 4.45
345 346 5.424252 CACATTTTAGTAGAGGTACCCCTGA 59.576 44.000 8.74 0.00 42.86 3.86
346 347 5.424573 ACATTTTAGTAGAGGTACCCCTGAC 59.575 44.000 8.74 1.86 42.86 3.51
347 348 4.961440 TTTAGTAGAGGTACCCCTGACT 57.039 45.455 8.74 9.71 42.86 3.41
348 349 6.407320 TTTTAGTAGAGGTACCCCTGACTA 57.593 41.667 8.74 8.71 42.86 2.59
349 350 3.949586 AGTAGAGGTACCCCTGACTAC 57.050 52.381 8.74 13.78 42.86 2.73
350 351 2.513317 AGTAGAGGTACCCCTGACTACC 59.487 54.545 8.74 0.00 42.86 3.18
351 352 0.635555 AGAGGTACCCCTGACTACCC 59.364 60.000 8.74 0.00 42.86 3.69
352 353 0.635555 GAGGTACCCCTGACTACCCT 59.364 60.000 8.74 0.00 42.86 4.34
353 354 0.635555 AGGTACCCCTGACTACCCTC 59.364 60.000 8.74 0.00 40.58 4.30
354 355 0.635555 GGTACCCCTGACTACCCTCT 59.364 60.000 0.00 0.00 0.00 3.69
355 356 1.008084 GGTACCCCTGACTACCCTCTT 59.992 57.143 0.00 0.00 0.00 2.85
356 357 2.561526 GGTACCCCTGACTACCCTCTTT 60.562 54.545 0.00 0.00 0.00 2.52
357 358 3.310141 GGTACCCCTGACTACCCTCTTTA 60.310 52.174 0.00 0.00 0.00 1.85
358 359 3.117552 ACCCCTGACTACCCTCTTTAG 57.882 52.381 0.00 0.00 0.00 1.85
359 360 2.386113 ACCCCTGACTACCCTCTTTAGT 59.614 50.000 0.00 0.00 32.23 2.24
360 361 3.032459 CCCCTGACTACCCTCTTTAGTC 58.968 54.545 3.08 3.08 43.97 2.59
368 369 0.253327 CCCTCTTTAGTCAGGGGTGC 59.747 60.000 0.00 0.00 45.39 5.01
369 370 1.280457 CCTCTTTAGTCAGGGGTGCT 58.720 55.000 0.00 0.00 28.24 4.40
370 371 1.630878 CCTCTTTAGTCAGGGGTGCTT 59.369 52.381 0.00 0.00 28.24 3.91
371 372 2.616510 CCTCTTTAGTCAGGGGTGCTTG 60.617 54.545 0.00 0.00 28.24 4.01
372 373 1.351017 TCTTTAGTCAGGGGTGCTTGG 59.649 52.381 0.00 0.00 0.00 3.61
373 374 1.351017 CTTTAGTCAGGGGTGCTTGGA 59.649 52.381 0.00 0.00 0.00 3.53
374 375 1.440618 TTAGTCAGGGGTGCTTGGAA 58.559 50.000 0.00 0.00 0.00 3.53
375 376 0.690762 TAGTCAGGGGTGCTTGGAAC 59.309 55.000 0.00 0.00 0.00 3.62
376 377 1.062488 AGTCAGGGGTGCTTGGAACT 61.062 55.000 0.00 0.00 0.00 3.01
377 378 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.000 0.00 0.00 0.00 2.66
378 379 0.555769 TCAGGGGTGCTTGGAACTTT 59.444 50.000 0.00 0.00 0.00 2.66
379 380 1.777878 TCAGGGGTGCTTGGAACTTTA 59.222 47.619 0.00 0.00 0.00 1.85
380 381 2.162681 CAGGGGTGCTTGGAACTTTAG 58.837 52.381 0.00 0.00 0.00 1.85
381 382 0.888619 GGGGTGCTTGGAACTTTAGC 59.111 55.000 0.00 0.00 35.50 3.09
382 383 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.000 0.00 0.00 34.03 3.93
383 384 1.547901 GGGTGCTTGGAACTTTAGCCT 60.548 52.381 0.00 0.00 34.03 4.58
384 385 2.239400 GGTGCTTGGAACTTTAGCCTT 58.761 47.619 0.00 0.00 34.03 4.35
385 386 2.628178 GGTGCTTGGAACTTTAGCCTTT 59.372 45.455 0.00 0.00 34.03 3.11
386 387 3.069586 GGTGCTTGGAACTTTAGCCTTTT 59.930 43.478 0.00 0.00 34.03 2.27
387 388 4.279922 GGTGCTTGGAACTTTAGCCTTTTA 59.720 41.667 0.00 0.00 34.03 1.52
388 389 5.047306 GGTGCTTGGAACTTTAGCCTTTTAT 60.047 40.000 0.00 0.00 34.03 1.40
389 390 6.152154 GGTGCTTGGAACTTTAGCCTTTTATA 59.848 38.462 0.00 0.00 34.03 0.98
390 391 7.251281 GTGCTTGGAACTTTAGCCTTTTATAG 58.749 38.462 0.00 0.00 34.03 1.31
391 392 7.120726 GTGCTTGGAACTTTAGCCTTTTATAGA 59.879 37.037 0.00 0.00 34.03 1.98
392 393 7.336931 TGCTTGGAACTTTAGCCTTTTATAGAG 59.663 37.037 0.00 0.00 34.03 2.43
393 394 7.553044 GCTTGGAACTTTAGCCTTTTATAGAGA 59.447 37.037 0.00 0.00 0.00 3.10
394 395 8.788325 TTGGAACTTTAGCCTTTTATAGAGAC 57.212 34.615 0.00 0.00 0.00 3.36
395 396 8.147244 TGGAACTTTAGCCTTTTATAGAGACT 57.853 34.615 0.00 0.00 0.00 3.24
396 397 9.263446 TGGAACTTTAGCCTTTTATAGAGACTA 57.737 33.333 0.00 0.00 0.00 2.59
426 427 8.178313 AGGTCAAACTAAAATAAGTCCTTTGG 57.822 34.615 0.00 0.00 0.00 3.28
427 428 8.002459 AGGTCAAACTAAAATAAGTCCTTTGGA 58.998 33.333 0.00 0.00 0.00 3.53
428 429 8.803235 GGTCAAACTAAAATAAGTCCTTTGGAT 58.197 33.333 0.00 0.00 32.73 3.41
436 437 8.887036 AAAATAAGTCCTTTGGATTCAAACAC 57.113 30.769 0.00 0.00 37.89 3.32
437 438 4.937201 AAGTCCTTTGGATTCAAACACC 57.063 40.909 0.00 0.00 37.89 4.16
438 439 3.230976 AGTCCTTTGGATTCAAACACCC 58.769 45.455 0.00 0.00 37.89 4.61
439 440 3.117131 AGTCCTTTGGATTCAAACACCCT 60.117 43.478 0.00 0.00 37.89 4.34
440 441 3.255888 GTCCTTTGGATTCAAACACCCTC 59.744 47.826 0.00 0.00 37.89 4.30
441 442 3.140144 TCCTTTGGATTCAAACACCCTCT 59.860 43.478 0.00 0.00 37.89 3.69
442 443 3.256631 CCTTTGGATTCAAACACCCTCTG 59.743 47.826 0.00 0.00 37.89 3.35
443 444 3.874383 TTGGATTCAAACACCCTCTGA 57.126 42.857 0.00 0.00 0.00 3.27
444 445 4.387026 TTGGATTCAAACACCCTCTGAT 57.613 40.909 0.00 0.00 0.00 2.90
445 446 4.387026 TGGATTCAAACACCCTCTGATT 57.613 40.909 0.00 0.00 0.00 2.57
446 447 4.335416 TGGATTCAAACACCCTCTGATTC 58.665 43.478 0.00 0.00 0.00 2.52
447 448 4.202556 TGGATTCAAACACCCTCTGATTCA 60.203 41.667 0.00 0.00 0.00 2.57
448 449 4.952335 GGATTCAAACACCCTCTGATTCAT 59.048 41.667 0.00 0.00 0.00 2.57
449 450 5.420104 GGATTCAAACACCCTCTGATTCATT 59.580 40.000 0.00 0.00 0.00 2.57
450 451 5.710513 TTCAAACACCCTCTGATTCATTG 57.289 39.130 0.00 0.00 0.00 2.82
451 452 4.984295 TCAAACACCCTCTGATTCATTGA 58.016 39.130 0.00 0.00 0.00 2.57
452 453 5.005740 TCAAACACCCTCTGATTCATTGAG 58.994 41.667 0.00 0.00 0.00 3.02
453 454 3.641434 ACACCCTCTGATTCATTGAGG 57.359 47.619 12.82 12.82 45.02 3.86
473 474 4.331968 AGGATGAATTGGCGAGTTGTAAA 58.668 39.130 0.00 0.00 0.00 2.01
569 597 0.955178 AGTCTGTGCCCGATCGATAG 59.045 55.000 18.66 4.63 0.00 2.08
570 598 0.664767 GTCTGTGCCCGATCGATAGC 60.665 60.000 18.66 16.50 0.00 2.97
571 599 0.823769 TCTGTGCCCGATCGATAGCT 60.824 55.000 18.66 0.00 0.00 3.32
572 600 0.665670 CTGTGCCCGATCGATAGCTG 60.666 60.000 18.66 7.45 0.00 4.24
573 601 1.364171 GTGCCCGATCGATAGCTGT 59.636 57.895 18.66 0.00 0.00 4.40
574 602 0.596577 GTGCCCGATCGATAGCTGTA 59.403 55.000 18.66 0.00 0.00 2.74
575 603 0.881796 TGCCCGATCGATAGCTGTAG 59.118 55.000 18.66 0.00 0.00 2.74
604 643 3.933332 GCAGTACCACTAATCTGTTGGTC 59.067 47.826 0.00 0.00 34.38 4.02
605 644 4.504858 CAGTACCACTAATCTGTTGGTCC 58.495 47.826 0.00 0.00 34.38 4.46
606 645 3.518303 AGTACCACTAATCTGTTGGTCCC 59.482 47.826 0.00 0.00 34.38 4.46
607 646 2.632537 ACCACTAATCTGTTGGTCCCT 58.367 47.619 0.00 0.00 0.00 4.20
608 647 2.572104 ACCACTAATCTGTTGGTCCCTC 59.428 50.000 0.00 0.00 0.00 4.30
609 648 2.418746 CCACTAATCTGTTGGTCCCTCG 60.419 54.545 0.00 0.00 0.00 4.63
610 649 2.496070 CACTAATCTGTTGGTCCCTCGA 59.504 50.000 0.00 0.00 0.00 4.04
611 650 3.056107 CACTAATCTGTTGGTCCCTCGAA 60.056 47.826 0.00 0.00 0.00 3.71
612 651 3.581332 ACTAATCTGTTGGTCCCTCGAAA 59.419 43.478 0.00 0.00 0.00 3.46
613 652 3.502123 AATCTGTTGGTCCCTCGAAAA 57.498 42.857 0.00 0.00 0.00 2.29
614 653 3.502123 ATCTGTTGGTCCCTCGAAAAA 57.498 42.857 0.00 0.00 0.00 1.94
615 654 3.502123 TCTGTTGGTCCCTCGAAAAAT 57.498 42.857 0.00 0.00 0.00 1.82
616 655 3.827722 TCTGTTGGTCCCTCGAAAAATT 58.172 40.909 0.00 0.00 0.00 1.82
617 656 3.818773 TCTGTTGGTCCCTCGAAAAATTC 59.181 43.478 0.00 0.00 0.00 2.17
646 870 1.599542 GCGGACCATTAATCTGAGTGC 59.400 52.381 0.00 0.00 0.00 4.40
701 925 3.558411 GCACACAGCGCCGAGATC 61.558 66.667 2.29 0.00 0.00 2.75
702 926 2.182791 CACACAGCGCCGAGATCT 59.817 61.111 2.29 0.00 0.00 2.75
703 927 1.875813 CACACAGCGCCGAGATCTC 60.876 63.158 13.05 13.05 0.00 2.75
705 929 0.748367 ACACAGCGCCGAGATCTCTA 60.748 55.000 20.26 0.00 0.00 2.43
707 931 0.878416 ACAGCGCCGAGATCTCTATC 59.122 55.000 20.26 8.16 0.00 2.08
708 932 0.179202 CAGCGCCGAGATCTCTATCG 60.179 60.000 20.26 18.88 37.19 2.92
748 980 1.589399 CCAGTCCTCCTCTCCTCCCT 61.589 65.000 0.00 0.00 0.00 4.20
793 1025 1.610363 TGGCAATCGGCAAACACTTA 58.390 45.000 0.00 0.00 46.20 2.24
837 1069 1.602377 CAACGTTCTTCTCCAACCCAC 59.398 52.381 0.00 0.00 0.00 4.61
873 1107 4.008933 CCCCGATCCAGCCGATCC 62.009 72.222 5.94 0.00 44.07 3.36
874 1108 4.008933 CCCGATCCAGCCGATCCC 62.009 72.222 5.94 0.00 44.07 3.85
875 1109 4.008933 CCGATCCAGCCGATCCCC 62.009 72.222 5.94 0.00 44.07 4.81
876 1110 2.919856 CGATCCAGCCGATCCCCT 60.920 66.667 5.94 0.00 44.07 4.79
877 1111 2.511452 CGATCCAGCCGATCCCCTT 61.511 63.158 5.94 0.00 44.07 3.95
878 1112 1.373059 GATCCAGCCGATCCCCTTC 59.627 63.158 0.75 0.00 41.51 3.46
879 1113 2.118233 GATCCAGCCGATCCCCTTCC 62.118 65.000 0.75 0.00 41.51 3.46
880 1114 3.878667 CCAGCCGATCCCCTTCCC 61.879 72.222 0.00 0.00 0.00 3.97
881 1115 2.770048 CAGCCGATCCCCTTCCCT 60.770 66.667 0.00 0.00 0.00 4.20
882 1116 2.042930 AGCCGATCCCCTTCCCTT 59.957 61.111 0.00 0.00 0.00 3.95
919 1158 1.185315 CCGCCTCCAATCAAAACCAT 58.815 50.000 0.00 0.00 0.00 3.55
925 1164 4.646492 GCCTCCAATCAAAACCATACATCT 59.354 41.667 0.00 0.00 0.00 2.90
945 1184 1.535444 ACACCACCACATCCGGAGA 60.535 57.895 11.34 0.00 0.00 3.71
948 1187 0.325671 ACCACCACATCCGGAGAGAT 60.326 55.000 11.34 0.00 0.00 2.75
1101 1365 1.792006 CGCCCAAGTACTTCGACTTT 58.208 50.000 4.77 0.00 37.57 2.66
1302 1566 2.017782 CGAGGATCAAGGAGTCGAGAA 58.982 52.381 0.00 0.00 32.32 2.87
1322 1586 1.586564 GGAGGTCAAGATCGACGCG 60.587 63.158 3.53 3.53 36.73 6.01
1503 1767 1.376466 GGAGGAGGCAGCAGTCAAA 59.624 57.895 0.00 0.00 0.00 2.69
1505 1769 1.303155 AGGAGGCAGCAGTCAAAGC 60.303 57.895 0.00 0.00 0.00 3.51
1604 1900 4.095782 TGTGTTCTGTTTCTGCCAGTTAAC 59.904 41.667 0.00 0.00 0.00 2.01
1870 2167 3.939564 AATGCCGGCTGGGAATTC 58.060 55.556 29.70 0.00 40.32 2.17
1986 2286 2.154798 TACCACTGCTGCGACCACTC 62.155 60.000 0.00 0.00 0.00 3.51
1987 2287 3.108289 CACTGCTGCGACCACTCG 61.108 66.667 0.00 0.00 43.28 4.18
1988 2288 3.606662 ACTGCTGCGACCACTCGT 61.607 61.111 0.00 0.00 42.33 4.18
2113 2413 4.673841 GCTGGCATTAAAGAAGAAGAGTGC 60.674 45.833 0.00 0.00 0.00 4.40
2165 2465 7.268199 TGACTCGTAGATATTGATACCGTTT 57.732 36.000 0.00 0.00 33.89 3.60
2185 2485 5.458779 CGTTTTCCAAAGTTTGAGATGGTTC 59.541 40.000 17.33 0.00 34.50 3.62
2342 2642 4.744795 AGACAGGTATAGCAGGAACTTG 57.255 45.455 4.48 0.00 34.60 3.16
2352 2652 4.910458 AGCAGGAACTTGTATTACTGGT 57.090 40.909 0.00 0.00 44.64 4.00
2428 2728 4.335647 CAAGTCCCGGGTGCTGCT 62.336 66.667 22.86 9.30 0.00 4.24
2442 2742 2.555757 GTGCTGCTTCACAAAGGAAGAT 59.444 45.455 7.08 0.00 45.66 2.40
2443 2743 2.555325 TGCTGCTTCACAAAGGAAGATG 59.445 45.455 7.08 0.46 45.66 2.90
2444 2744 2.555757 GCTGCTTCACAAAGGAAGATGT 59.444 45.455 7.08 0.00 45.66 3.06
2454 2754 8.918202 TCACAAAGGAAGATGTTGTAGTTTAT 57.082 30.769 0.00 0.00 33.80 1.40
2527 2827 0.389166 CACTCTCTGAAGGTGGCGAC 60.389 60.000 0.00 0.00 0.00 5.19
2601 2901 6.540189 AGATATGAAACTGCAGGTGTAATGTC 59.460 38.462 19.93 13.31 0.00 3.06
2704 3038 4.791974 CAGCTGAAATGGTCAAGAAGTTC 58.208 43.478 8.42 0.00 35.22 3.01
2846 3182 4.728882 GCATGATAGCAGTTCGAAGTTTGG 60.729 45.833 1.81 0.00 0.00 3.28
2922 3258 7.565323 AACGGTATTAGTAGTTGACTAGGAG 57.435 40.000 0.00 0.00 41.75 3.69
2923 3259 6.657875 ACGGTATTAGTAGTTGACTAGGAGT 58.342 40.000 0.00 0.00 41.75 3.85
2926 3262 7.914346 CGGTATTAGTAGTTGACTAGGAGTTTG 59.086 40.741 0.00 0.00 41.75 2.93
2927 3263 8.747471 GGTATTAGTAGTTGACTAGGAGTTTGT 58.253 37.037 0.00 0.00 41.75 2.83
2930 3266 6.481434 AGTAGTTGACTAGGAGTTTGTTGT 57.519 37.500 0.00 0.00 36.27 3.32
2931 3267 6.885922 AGTAGTTGACTAGGAGTTTGTTGTT 58.114 36.000 0.00 0.00 36.27 2.83
2932 3268 6.761714 AGTAGTTGACTAGGAGTTTGTTGTTG 59.238 38.462 0.00 0.00 36.27 3.33
2933 3269 5.497474 AGTTGACTAGGAGTTTGTTGTTGT 58.503 37.500 0.00 0.00 0.00 3.32
2934 3270 5.944007 AGTTGACTAGGAGTTTGTTGTTGTT 59.056 36.000 0.00 0.00 0.00 2.83
2935 3271 6.433093 AGTTGACTAGGAGTTTGTTGTTGTTT 59.567 34.615 0.00 0.00 0.00 2.83
2936 3272 7.608761 AGTTGACTAGGAGTTTGTTGTTGTTTA 59.391 33.333 0.00 0.00 0.00 2.01
2939 3275 8.962679 TGACTAGGAGTTTGTTGTTGTTTAATT 58.037 29.630 0.00 0.00 0.00 1.40
2950 3286 9.755804 TTGTTGTTGTTTAATTCATATTGCAGA 57.244 25.926 0.00 0.00 0.00 4.26
2951 3287 9.755804 TGTTGTTGTTTAATTCATATTGCAGAA 57.244 25.926 0.00 0.00 0.00 3.02
2953 3289 9.755804 TTGTTGTTTAATTCATATTGCAGAACA 57.244 25.926 0.00 0.00 0.00 3.18
2954 3290 9.755804 TGTTGTTTAATTCATATTGCAGAACAA 57.244 25.926 0.00 0.00 44.01 2.83
3014 3350 9.755804 TGTTGTTGTTTAATTCATATTGCAGAA 57.244 25.926 0.00 0.00 0.00 3.02
3230 3567 4.273480 ACAGTTTGTATGCTCACTGTGAAC 59.727 41.667 12.16 8.12 46.41 3.18
3642 4021 4.878397 TCTTGCTTCTGCTTTTAGATAGCC 59.122 41.667 0.00 0.00 40.48 3.93
3728 4147 8.298566 CGTATTTGACTGTCATAACAAATTCG 57.701 34.615 11.86 12.62 42.11 3.34
3804 4223 5.617252 TCACCTTAAAACGATGGAAAGAGT 58.383 37.500 0.00 0.00 0.00 3.24
3881 4300 4.034285 AGCATACTAGCACCTGGTTTTT 57.966 40.909 0.00 0.00 36.85 1.94
3909 4336 5.164070 CGTTATGTTGTTGATTGTGGCAATG 60.164 40.000 0.00 0.00 0.00 2.82
4026 4457 5.940470 GGCCATCTAGGTACATTTATTGAGG 59.060 44.000 0.00 0.00 40.61 3.86
4063 4494 2.051334 ACTGTGCTGCAACCTTGTAA 57.949 45.000 2.77 0.00 0.00 2.41
4079 4510 7.596749 ACCTTGTAAATTCGACTCTAACATG 57.403 36.000 0.00 0.00 0.00 3.21
4100 4534 3.317993 TGAGCTTTAACAGGGTGAAAAGC 59.682 43.478 15.88 15.88 43.38 3.51
4121 4555 4.081198 AGCACTCAGGAATTGGAACTAGAG 60.081 45.833 0.00 0.00 0.00 2.43
4135 4569 5.548056 TGGAACTAGAGGAATTGGAGAAAGT 59.452 40.000 0.00 0.00 0.00 2.66
4186 4620 8.474006 AACAAAAAGGTCTTGTACATTTCAAC 57.526 30.769 0.00 0.00 41.02 3.18
4397 4831 3.243068 GGTGTGTGCTGAAGTAAACCAAG 60.243 47.826 0.00 0.00 0.00 3.61
4773 5207 9.421806 GATAGATATATGCTGAACATATCCTGC 57.578 37.037 1.62 0.00 46.98 4.85
4790 5224 1.153005 GCTCCCAGGCCATCTCTTG 60.153 63.158 5.01 0.00 0.00 3.02
4984 5418 6.638873 CCGATACTGAAAGAGTAAGTAGCATG 59.361 42.308 0.00 0.00 40.67 4.06
4990 5424 5.179368 TGAAAGAGTAAGTAGCATGTGCAAC 59.821 40.000 7.83 0.00 45.16 4.17
4992 5426 2.678336 GAGTAAGTAGCATGTGCAACCC 59.322 50.000 7.83 0.00 45.16 4.11
5023 5457 5.320549 ACGTACGACCTCTTGATTTATGT 57.679 39.130 24.41 0.00 0.00 2.29
5031 5465 8.883731 ACGACCTCTTGATTTATGTTTTATCTG 58.116 33.333 0.00 0.00 0.00 2.90
5032 5466 8.338259 CGACCTCTTGATTTATGTTTTATCTGG 58.662 37.037 0.00 0.00 0.00 3.86
5033 5467 8.525290 ACCTCTTGATTTATGTTTTATCTGGG 57.475 34.615 0.00 0.00 0.00 4.45
5034 5468 8.336235 ACCTCTTGATTTATGTTTTATCTGGGA 58.664 33.333 0.00 0.00 0.00 4.37
5035 5469 9.189156 CCTCTTGATTTATGTTTTATCTGGGAA 57.811 33.333 0.00 0.00 0.00 3.97
5037 5471 9.973661 TCTTGATTTATGTTTTATCTGGGAAGA 57.026 29.630 0.00 0.00 0.00 2.87
5244 5684 7.523873 AGTAATTTTACCTGCTTTTGCTCCTTC 60.524 37.037 0.00 0.00 39.22 3.46
5388 5845 7.011016 CGAATTTGCACAGAAGGTACATACATA 59.989 37.037 0.00 0.00 0.00 2.29
5389 5846 6.978343 TTTGCACAGAAGGTACATACATAC 57.022 37.500 0.00 0.00 0.00 2.39
5390 5847 5.669164 TGCACAGAAGGTACATACATACA 57.331 39.130 0.00 0.00 0.00 2.29
5391 5848 5.416083 TGCACAGAAGGTACATACATACAC 58.584 41.667 0.00 0.00 0.00 2.90
5392 5849 4.503007 GCACAGAAGGTACATACATACACG 59.497 45.833 0.00 0.00 0.00 4.49
5393 5850 4.503007 CACAGAAGGTACATACATACACGC 59.497 45.833 0.00 0.00 0.00 5.34
5394 5851 3.729217 CAGAAGGTACATACATACACGCG 59.271 47.826 3.53 3.53 0.00 6.01
5395 5852 3.628942 AGAAGGTACATACATACACGCGA 59.371 43.478 15.93 0.00 0.00 5.87
5396 5853 3.344904 AGGTACATACATACACGCGAC 57.655 47.619 15.93 0.00 0.00 5.19
5397 5854 2.039085 GGTACATACATACACGCGACG 58.961 52.381 15.93 5.81 0.00 5.12
5398 5855 1.445731 GTACATACATACACGCGACGC 59.554 52.381 15.93 10.49 0.00 5.19
5399 5856 0.179158 ACATACATACACGCGACGCA 60.179 50.000 21.35 0.00 0.00 5.24
5400 5857 1.128513 CATACATACACGCGACGCAT 58.871 50.000 21.35 0.00 0.00 4.73
5403 5860 1.588932 CATACACGCGACGCATCCT 60.589 57.895 21.35 1.00 0.00 3.24
5418 5875 0.674895 ATCCTTGCCTGTTCGTCAGC 60.675 55.000 5.20 0.00 42.38 4.26
5420 5877 1.302033 CTTGCCTGTTCGTCAGCCT 60.302 57.895 5.20 0.00 42.38 4.58
5421 5878 0.886490 CTTGCCTGTTCGTCAGCCTT 60.886 55.000 5.20 0.00 42.38 4.35
5422 5879 0.465460 TTGCCTGTTCGTCAGCCTTT 60.465 50.000 5.20 0.00 42.38 3.11
5458 5915 0.690762 ACCATGGCGACTAACCAACT 59.309 50.000 13.04 0.00 41.49 3.16
5610 6069 2.829384 GGTGACCAGGCCCAAGTCA 61.829 63.158 14.36 14.36 38.17 3.41
5684 6149 3.645434 AGATGATCTCAGTCTCCAGCTT 58.355 45.455 0.00 0.00 0.00 3.74
5711 6186 2.102252 CTCCATCTGCTGTACCTTCTCC 59.898 54.545 0.00 0.00 0.00 3.71
5735 6210 0.467384 CCCTGACGCCAAGATCATCT 59.533 55.000 0.00 0.00 0.00 2.90
5877 6369 6.037726 TGCTGATTGATTGATGTTATTGTGC 58.962 36.000 0.00 0.00 0.00 4.57
5912 6404 5.301551 TCCAGTTTATCTGTTGTTTGTGCAT 59.698 36.000 0.00 0.00 42.19 3.96
5929 6421 7.920160 TTGTGCATGTCTCACTATTTTGATA 57.080 32.000 0.00 0.00 35.58 2.15
5930 6422 7.543947 TGTGCATGTCTCACTATTTTGATAG 57.456 36.000 0.00 0.00 35.58 2.08
5959 6451 0.804989 AGTGCCGCTTAATTGTCTGC 59.195 50.000 0.00 0.00 0.00 4.26
5977 6469 1.441311 CCCCGTTGCTGCAAAACTT 59.559 52.632 17.80 0.00 0.00 2.66
5978 6470 0.671251 CCCCGTTGCTGCAAAACTTA 59.329 50.000 17.80 0.00 0.00 2.24
6071 6573 1.407434 AAAACACATGCGCAACATCG 58.593 45.000 17.11 3.94 36.64 3.84
6072 6574 0.310543 AAACACATGCGCAACATCGT 59.689 45.000 17.11 4.67 36.64 3.73
6074 6576 0.950555 ACACATGCGCAACATCGTCT 60.951 50.000 17.11 0.00 36.64 4.18
6076 6578 0.999406 ACATGCGCAACATCGTCTAC 59.001 50.000 17.11 0.00 36.64 2.59
6084 6586 3.301906 CGCAACATCGTCTACAAGAAGAG 59.698 47.826 0.00 0.00 36.25 2.85
6087 6589 4.705337 ACATCGTCTACAAGAAGAGGAC 57.295 45.455 10.62 0.00 41.67 3.85
6096 6598 8.705048 GTCTACAAGAAGAGGACGAAAATAAT 57.295 34.615 0.00 0.00 0.00 1.28
6097 6599 8.809478 GTCTACAAGAAGAGGACGAAAATAATC 58.191 37.037 0.00 0.00 0.00 1.75
6162 6727 0.981183 TCAAATACCAGCTCCACCGT 59.019 50.000 0.00 0.00 0.00 4.83
6176 6741 0.512952 CACCGTGGCTTCTCTTTTCG 59.487 55.000 0.00 0.00 0.00 3.46
6203 6775 0.606673 ACCTCGCTTCTTTTGCCCTC 60.607 55.000 0.00 0.00 0.00 4.30
6209 6781 1.812571 GCTTCTTTTGCCCTCGAATGA 59.187 47.619 0.00 0.00 0.00 2.57
6215 6787 0.321210 TTGCCCTCGAATGAAAGCGA 60.321 50.000 0.00 0.00 35.01 4.93
6220 6792 2.611518 CCTCGAATGAAAGCGACTTCT 58.388 47.619 0.00 0.00 32.51 2.85
6231 6803 3.372660 AGCGACTTCTCGAGTTTCTTT 57.627 42.857 13.13 0.00 43.06 2.52
6246 6818 1.597027 CTTTGTCGGCCCGTCTGTT 60.597 57.895 1.63 0.00 0.00 3.16
6249 6821 3.998672 GTCGGCCCGTCTGTTGGA 61.999 66.667 1.63 0.00 0.00 3.53
6254 6826 1.745489 GCCCGTCTGTTGGATGGTC 60.745 63.158 3.63 0.00 46.89 4.02
6269 6841 1.244697 TGGTCTGAGCGTGACTCCTC 61.245 60.000 2.07 0.00 45.61 3.71
6283 6855 2.544267 GACTCCTCTTTTTGTCCACACG 59.456 50.000 0.00 0.00 0.00 4.49
6284 6856 2.169769 ACTCCTCTTTTTGTCCACACGA 59.830 45.455 0.00 0.00 0.00 4.35
6288 6860 2.011222 TCTTTTTGTCCACACGACCAC 58.989 47.619 0.00 0.00 41.18 4.16
6330 6902 1.284715 CGGTGGCCGGAAGTTTTTC 59.715 57.895 5.05 0.00 44.15 2.29
6338 6910 2.224784 GCCGGAAGTTTTTCGAGCTTTA 59.775 45.455 5.05 0.00 33.98 1.85
6362 6970 4.046286 TGAGGTGGTTTTTGGAGCATAT 57.954 40.909 0.00 0.00 0.00 1.78
6364 6972 5.765510 TGAGGTGGTTTTTGGAGCATATAT 58.234 37.500 0.00 0.00 0.00 0.86
6441 7052 1.468914 GTGCCCGATCCTTGTTTCTTC 59.531 52.381 0.00 0.00 0.00 2.87
6477 7088 2.268920 GTGCGCCTGGAGGATTCA 59.731 61.111 4.18 0.00 37.39 2.57
6490 7101 3.242870 GGAGGATTCAATGATGTTGTCGC 60.243 47.826 0.00 0.00 0.00 5.19
6530 7141 2.114825 GTCGTCGTCTTTCGTCTTTGT 58.885 47.619 0.00 0.00 40.80 2.83
6536 7147 2.716398 GTCTTTCGTCTTTGTTGCACC 58.284 47.619 0.00 0.00 0.00 5.01
6554 7165 1.869132 ACCGAGGTTTGCTCGTTTAAC 59.131 47.619 0.00 0.00 42.15 2.01
6578 7189 2.033492 GCGTGTGTAGCGTAGTTTGTTT 60.033 45.455 0.00 0.00 0.00 2.83
6584 7195 5.581479 TGTGTAGCGTAGTTTGTTTTCTTCA 59.419 36.000 0.00 0.00 0.00 3.02
6624 7237 7.571059 GCATTTTGTTTTTGTGTGTCTTCTTGT 60.571 33.333 0.00 0.00 0.00 3.16
6638 7251 6.521133 GTGTCTTCTTGTTGCGATAGAATTTG 59.479 38.462 0.00 0.00 39.76 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.774742 GTTTCATCTATTTACTGTGGAAATGAC 57.225 33.333 0.00 0.00 0.00 3.06
1 2 8.956426 GGTTTCATCTATTTACTGTGGAAATGA 58.044 33.333 0.00 0.00 0.00 2.57
2 3 8.190784 GGGTTTCATCTATTTACTGTGGAAATG 58.809 37.037 0.00 0.00 0.00 2.32
3 4 7.893302 TGGGTTTCATCTATTTACTGTGGAAAT 59.107 33.333 0.00 0.00 0.00 2.17
4 5 7.175990 GTGGGTTTCATCTATTTACTGTGGAAA 59.824 37.037 0.00 0.00 0.00 3.13
5 6 6.657541 GTGGGTTTCATCTATTTACTGTGGAA 59.342 38.462 0.00 0.00 0.00 3.53
6 7 6.012858 AGTGGGTTTCATCTATTTACTGTGGA 60.013 38.462 0.00 0.00 0.00 4.02
7 8 6.180472 AGTGGGTTTCATCTATTTACTGTGG 58.820 40.000 0.00 0.00 0.00 4.17
8 9 7.011482 GCTAGTGGGTTTCATCTATTTACTGTG 59.989 40.741 0.00 0.00 0.00 3.66
9 10 7.048512 GCTAGTGGGTTTCATCTATTTACTGT 58.951 38.462 0.00 0.00 0.00 3.55
10 11 7.047891 TGCTAGTGGGTTTCATCTATTTACTG 58.952 38.462 0.00 0.00 0.00 2.74
11 12 7.195374 TGCTAGTGGGTTTCATCTATTTACT 57.805 36.000 0.00 0.00 0.00 2.24
12 13 7.715249 TCATGCTAGTGGGTTTCATCTATTTAC 59.285 37.037 0.00 0.00 0.00 2.01
13 14 7.801104 TCATGCTAGTGGGTTTCATCTATTTA 58.199 34.615 0.00 0.00 0.00 1.40
14 15 6.662755 TCATGCTAGTGGGTTTCATCTATTT 58.337 36.000 0.00 0.00 0.00 1.40
15 16 6.126652 ACTCATGCTAGTGGGTTTCATCTATT 60.127 38.462 0.00 0.00 24.71 1.73
16 17 5.367937 ACTCATGCTAGTGGGTTTCATCTAT 59.632 40.000 0.00 0.00 24.71 1.98
17 18 4.716784 ACTCATGCTAGTGGGTTTCATCTA 59.283 41.667 0.00 0.00 24.71 1.98
18 19 3.521126 ACTCATGCTAGTGGGTTTCATCT 59.479 43.478 0.00 0.00 24.71 2.90
19 20 3.878778 ACTCATGCTAGTGGGTTTCATC 58.121 45.455 0.00 0.00 24.71 2.92
20 21 4.141620 CCTACTCATGCTAGTGGGTTTCAT 60.142 45.833 8.36 0.00 41.80 2.57
21 22 3.197766 CCTACTCATGCTAGTGGGTTTCA 59.802 47.826 8.36 0.00 41.80 2.69
22 23 3.451178 TCCTACTCATGCTAGTGGGTTTC 59.549 47.826 14.27 0.00 45.67 2.78
23 24 3.450904 TCCTACTCATGCTAGTGGGTTT 58.549 45.455 14.27 0.00 45.67 3.27
24 25 3.034635 CTCCTACTCATGCTAGTGGGTT 58.965 50.000 14.27 0.00 45.67 4.11
25 26 2.023888 ACTCCTACTCATGCTAGTGGGT 60.024 50.000 14.27 6.05 45.67 4.51
26 27 2.672098 ACTCCTACTCATGCTAGTGGG 58.328 52.381 9.88 9.88 46.59 4.61
27 28 3.449018 ACAACTCCTACTCATGCTAGTGG 59.551 47.826 0.00 0.00 0.00 4.00
28 29 4.727507 ACAACTCCTACTCATGCTAGTG 57.272 45.455 0.00 0.00 0.00 2.74
29 30 5.246203 TCAAACAACTCCTACTCATGCTAGT 59.754 40.000 0.00 0.00 0.00 2.57
30 31 5.724328 TCAAACAACTCCTACTCATGCTAG 58.276 41.667 0.00 0.00 0.00 3.42
31 32 5.724328 CTCAAACAACTCCTACTCATGCTA 58.276 41.667 0.00 0.00 0.00 3.49
32 33 4.573900 CTCAAACAACTCCTACTCATGCT 58.426 43.478 0.00 0.00 0.00 3.79
33 34 3.126000 GCTCAAACAACTCCTACTCATGC 59.874 47.826 0.00 0.00 0.00 4.06
34 35 4.573900 AGCTCAAACAACTCCTACTCATG 58.426 43.478 0.00 0.00 0.00 3.07
35 36 4.530161 AGAGCTCAAACAACTCCTACTCAT 59.470 41.667 17.77 0.00 0.00 2.90
36 37 3.898123 AGAGCTCAAACAACTCCTACTCA 59.102 43.478 17.77 0.00 0.00 3.41
37 38 4.021894 TCAGAGCTCAAACAACTCCTACTC 60.022 45.833 17.77 0.00 0.00 2.59
38 39 3.898123 TCAGAGCTCAAACAACTCCTACT 59.102 43.478 17.77 0.00 0.00 2.57
39 40 4.258702 TCAGAGCTCAAACAACTCCTAC 57.741 45.455 17.77 0.00 0.00 3.18
40 41 4.284490 ACATCAGAGCTCAAACAACTCCTA 59.716 41.667 17.77 0.00 0.00 2.94
41 42 3.072184 ACATCAGAGCTCAAACAACTCCT 59.928 43.478 17.77 0.00 0.00 3.69
42 43 3.188048 CACATCAGAGCTCAAACAACTCC 59.812 47.826 17.77 0.00 0.00 3.85
43 44 3.364764 GCACATCAGAGCTCAAACAACTC 60.365 47.826 17.77 0.00 0.00 3.01
44 45 2.551459 GCACATCAGAGCTCAAACAACT 59.449 45.455 17.77 0.00 0.00 3.16
45 46 2.351157 GGCACATCAGAGCTCAAACAAC 60.351 50.000 17.77 0.00 0.00 3.32
46 47 1.881973 GGCACATCAGAGCTCAAACAA 59.118 47.619 17.77 0.00 0.00 2.83
47 48 1.072806 AGGCACATCAGAGCTCAAACA 59.927 47.619 17.77 0.00 0.00 2.83
48 49 1.818642 AGGCACATCAGAGCTCAAAC 58.181 50.000 17.77 0.00 0.00 2.93
49 50 2.568956 AGTAGGCACATCAGAGCTCAAA 59.431 45.455 17.77 3.17 0.00 2.69
50 51 2.167281 GAGTAGGCACATCAGAGCTCAA 59.833 50.000 17.77 3.59 0.00 3.02
51 52 1.753649 GAGTAGGCACATCAGAGCTCA 59.246 52.381 17.77 0.00 0.00 4.26
52 53 1.753649 TGAGTAGGCACATCAGAGCTC 59.246 52.381 5.27 5.27 0.00 4.09
53 54 1.857965 TGAGTAGGCACATCAGAGCT 58.142 50.000 0.00 0.00 0.00 4.09
54 55 2.906691 ATGAGTAGGCACATCAGAGC 57.093 50.000 0.00 0.00 0.00 4.09
55 56 4.397481 TGAATGAGTAGGCACATCAGAG 57.603 45.455 0.00 0.00 0.00 3.35
56 57 4.700700 CATGAATGAGTAGGCACATCAGA 58.299 43.478 0.00 0.00 0.00 3.27
57 58 3.250280 GCATGAATGAGTAGGCACATCAG 59.750 47.826 0.00 0.00 0.00 2.90
58 59 3.118149 AGCATGAATGAGTAGGCACATCA 60.118 43.478 0.00 0.00 0.00 3.07
59 60 3.474600 AGCATGAATGAGTAGGCACATC 58.525 45.455 0.00 0.00 0.00 3.06
60 61 3.572632 AGCATGAATGAGTAGGCACAT 57.427 42.857 0.00 0.00 0.00 3.21
61 62 3.011818 CAAGCATGAATGAGTAGGCACA 58.988 45.455 0.00 0.00 0.00 4.57
62 63 3.012518 ACAAGCATGAATGAGTAGGCAC 58.987 45.455 0.00 0.00 0.00 5.01
63 64 3.354948 ACAAGCATGAATGAGTAGGCA 57.645 42.857 0.00 0.00 0.00 4.75
64 65 4.082571 ACAAACAAGCATGAATGAGTAGGC 60.083 41.667 0.00 0.00 0.00 3.93
65 66 5.181811 TGACAAACAAGCATGAATGAGTAGG 59.818 40.000 0.00 0.00 0.00 3.18
66 67 6.245115 TGACAAACAAGCATGAATGAGTAG 57.755 37.500 0.00 0.00 0.00 2.57
67 68 6.614160 CATGACAAACAAGCATGAATGAGTA 58.386 36.000 0.00 0.00 41.35 2.59
68 69 5.466819 CATGACAAACAAGCATGAATGAGT 58.533 37.500 0.00 0.00 41.35 3.41
69 70 4.326278 GCATGACAAACAAGCATGAATGAG 59.674 41.667 0.00 0.00 41.95 2.90
70 71 4.239304 GCATGACAAACAAGCATGAATGA 58.761 39.130 0.00 0.00 41.95 2.57
71 72 3.369756 GGCATGACAAACAAGCATGAATG 59.630 43.478 0.00 0.00 43.80 2.67
72 73 3.259876 AGGCATGACAAACAAGCATGAAT 59.740 39.130 0.00 0.00 43.80 2.57
73 74 2.629137 AGGCATGACAAACAAGCATGAA 59.371 40.909 0.00 0.00 43.80 2.57
74 75 2.241160 AGGCATGACAAACAAGCATGA 58.759 42.857 0.00 0.00 43.80 3.07
75 76 2.333926 CAGGCATGACAAACAAGCATG 58.666 47.619 0.00 0.00 45.39 4.06
76 77 1.337447 GCAGGCATGACAAACAAGCAT 60.337 47.619 0.62 0.00 43.80 3.79
77 78 0.032403 GCAGGCATGACAAACAAGCA 59.968 50.000 0.62 0.00 43.80 3.91
78 79 0.316204 AGCAGGCATGACAAACAAGC 59.684 50.000 0.62 0.00 41.68 4.01
79 80 2.816087 AGTAGCAGGCATGACAAACAAG 59.184 45.455 0.62 0.00 0.00 3.16
80 81 2.862541 AGTAGCAGGCATGACAAACAA 58.137 42.857 0.62 0.00 0.00 2.83
81 82 2.566833 AGTAGCAGGCATGACAAACA 57.433 45.000 0.62 0.00 0.00 2.83
82 83 3.600388 AGTAGTAGCAGGCATGACAAAC 58.400 45.455 0.62 0.00 0.00 2.93
83 84 3.981071 AGTAGTAGCAGGCATGACAAA 57.019 42.857 0.62 0.00 0.00 2.83
84 85 3.981071 AAGTAGTAGCAGGCATGACAA 57.019 42.857 0.62 0.00 0.00 3.18
85 86 4.278310 TCTAAGTAGTAGCAGGCATGACA 58.722 43.478 0.62 0.00 0.00 3.58
86 87 4.339814 ACTCTAAGTAGTAGCAGGCATGAC 59.660 45.833 0.62 0.00 0.00 3.06
87 88 4.537751 ACTCTAAGTAGTAGCAGGCATGA 58.462 43.478 0.62 0.00 0.00 3.07
88 89 4.927978 ACTCTAAGTAGTAGCAGGCATG 57.072 45.455 0.00 0.00 0.00 4.06
89 90 4.956700 TCAACTCTAAGTAGTAGCAGGCAT 59.043 41.667 0.00 0.00 0.00 4.40
90 91 4.341487 TCAACTCTAAGTAGTAGCAGGCA 58.659 43.478 0.00 0.00 0.00 4.75
91 92 4.399934 ACTCAACTCTAAGTAGTAGCAGGC 59.600 45.833 0.00 0.00 0.00 4.85
92 93 6.518208 AACTCAACTCTAAGTAGTAGCAGG 57.482 41.667 0.00 0.00 0.00 4.85
93 94 7.337436 ACCTAACTCAACTCTAAGTAGTAGCAG 59.663 40.741 0.00 0.00 0.00 4.24
94 95 7.173722 ACCTAACTCAACTCTAAGTAGTAGCA 58.826 38.462 0.00 0.00 0.00 3.49
95 96 7.553760 AGACCTAACTCAACTCTAAGTAGTAGC 59.446 40.741 0.00 0.00 0.00 3.58
96 97 8.885722 CAGACCTAACTCAACTCTAAGTAGTAG 58.114 40.741 0.00 0.00 0.00 2.57
97 98 8.600668 TCAGACCTAACTCAACTCTAAGTAGTA 58.399 37.037 0.00 0.00 0.00 1.82
98 99 7.460071 TCAGACCTAACTCAACTCTAAGTAGT 58.540 38.462 0.00 0.00 0.00 2.73
99 100 7.825270 TCTCAGACCTAACTCAACTCTAAGTAG 59.175 40.741 0.00 0.00 0.00 2.57
100 101 7.687388 TCTCAGACCTAACTCAACTCTAAGTA 58.313 38.462 0.00 0.00 0.00 2.24
101 102 6.544650 TCTCAGACCTAACTCAACTCTAAGT 58.455 40.000 0.00 0.00 0.00 2.24
102 103 6.094881 CCTCTCAGACCTAACTCAACTCTAAG 59.905 46.154 0.00 0.00 0.00 2.18
103 104 5.946972 CCTCTCAGACCTAACTCAACTCTAA 59.053 44.000 0.00 0.00 0.00 2.10
104 105 5.502079 CCTCTCAGACCTAACTCAACTCTA 58.498 45.833 0.00 0.00 0.00 2.43
105 106 4.340617 CCTCTCAGACCTAACTCAACTCT 58.659 47.826 0.00 0.00 0.00 3.24
106 107 3.445805 CCCTCTCAGACCTAACTCAACTC 59.554 52.174 0.00 0.00 0.00 3.01
107 108 3.181416 ACCCTCTCAGACCTAACTCAACT 60.181 47.826 0.00 0.00 0.00 3.16
108 109 3.056465 CACCCTCTCAGACCTAACTCAAC 60.056 52.174 0.00 0.00 0.00 3.18
109 110 3.165875 CACCCTCTCAGACCTAACTCAA 58.834 50.000 0.00 0.00 0.00 3.02
110 111 2.808919 CACCCTCTCAGACCTAACTCA 58.191 52.381 0.00 0.00 0.00 3.41
111 112 1.478916 GCACCCTCTCAGACCTAACTC 59.521 57.143 0.00 0.00 0.00 3.01
112 113 1.077993 AGCACCCTCTCAGACCTAACT 59.922 52.381 0.00 0.00 0.00 2.24
113 114 1.562783 AGCACCCTCTCAGACCTAAC 58.437 55.000 0.00 0.00 0.00 2.34
114 115 1.902508 CAAGCACCCTCTCAGACCTAA 59.097 52.381 0.00 0.00 0.00 2.69
115 116 1.561643 CAAGCACCCTCTCAGACCTA 58.438 55.000 0.00 0.00 0.00 3.08
116 117 1.197430 CCAAGCACCCTCTCAGACCT 61.197 60.000 0.00 0.00 0.00 3.85
117 118 1.194781 TCCAAGCACCCTCTCAGACC 61.195 60.000 0.00 0.00 0.00 3.85
118 119 0.908198 ATCCAAGCACCCTCTCAGAC 59.092 55.000 0.00 0.00 0.00 3.51
119 120 2.111384 GTATCCAAGCACCCTCTCAGA 58.889 52.381 0.00 0.00 0.00 3.27
120 121 1.202463 CGTATCCAAGCACCCTCTCAG 60.202 57.143 0.00 0.00 0.00 3.35
121 122 0.824109 CGTATCCAAGCACCCTCTCA 59.176 55.000 0.00 0.00 0.00 3.27
122 123 0.824759 ACGTATCCAAGCACCCTCTC 59.175 55.000 0.00 0.00 0.00 3.20
123 124 1.276622 AACGTATCCAAGCACCCTCT 58.723 50.000 0.00 0.00 0.00 3.69
124 125 2.109425 AAACGTATCCAAGCACCCTC 57.891 50.000 0.00 0.00 0.00 4.30
125 126 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
126 127 3.340928 ACTAAAACGTATCCAAGCACCC 58.659 45.455 0.00 0.00 0.00 4.61
127 128 4.251268 AGACTAAAACGTATCCAAGCACC 58.749 43.478 0.00 0.00 0.00 5.01
128 129 4.927425 TGAGACTAAAACGTATCCAAGCAC 59.073 41.667 0.00 0.00 0.00 4.40
129 130 5.142061 TGAGACTAAAACGTATCCAAGCA 57.858 39.130 0.00 0.00 0.00 3.91
130 131 5.810587 TCATGAGACTAAAACGTATCCAAGC 59.189 40.000 0.00 0.00 0.00 4.01
131 132 7.223058 GTCATGAGACTAAAACGTATCCAAG 57.777 40.000 0.00 0.00 41.64 3.61
146 147 6.071278 AGTCCCACTACTTTTAGTCATGAGAC 60.071 42.308 0.00 0.00 45.31 3.36
147 148 6.017192 AGTCCCACTACTTTTAGTCATGAGA 58.983 40.000 0.00 0.00 36.31 3.27
148 149 6.287589 AGTCCCACTACTTTTAGTCATGAG 57.712 41.667 0.00 0.00 36.31 2.90
149 150 7.786046 TTAGTCCCACTACTTTTAGTCATGA 57.214 36.000 0.00 0.00 36.31 3.07
150 151 7.064728 GCTTTAGTCCCACTACTTTTAGTCATG 59.935 40.741 0.00 0.00 36.31 3.07
151 152 7.038231 AGCTTTAGTCCCACTACTTTTAGTCAT 60.038 37.037 0.00 0.00 36.31 3.06
152 153 6.269307 AGCTTTAGTCCCACTACTTTTAGTCA 59.731 38.462 0.00 0.00 36.31 3.41
153 154 6.699366 AGCTTTAGTCCCACTACTTTTAGTC 58.301 40.000 0.00 0.00 36.31 2.59
154 155 6.683312 AGCTTTAGTCCCACTACTTTTAGT 57.317 37.500 0.00 0.00 39.30 2.24
155 156 6.128254 GCAAGCTTTAGTCCCACTACTTTTAG 60.128 42.308 0.00 0.00 28.93 1.85
156 157 5.704053 GCAAGCTTTAGTCCCACTACTTTTA 59.296 40.000 0.00 0.00 28.93 1.52
157 158 4.519350 GCAAGCTTTAGTCCCACTACTTTT 59.481 41.667 0.00 0.00 28.93 2.27
158 159 4.072839 GCAAGCTTTAGTCCCACTACTTT 58.927 43.478 0.00 0.00 28.93 2.66
159 160 3.328050 AGCAAGCTTTAGTCCCACTACTT 59.672 43.478 0.00 0.00 28.93 2.24
160 161 2.907042 AGCAAGCTTTAGTCCCACTACT 59.093 45.455 0.00 0.00 28.93 2.57
161 162 3.336138 AGCAAGCTTTAGTCCCACTAC 57.664 47.619 0.00 0.00 28.93 2.73
162 163 3.118738 GCTAGCAAGCTTTAGTCCCACTA 60.119 47.826 10.63 0.00 45.85 2.74
163 164 2.355209 GCTAGCAAGCTTTAGTCCCACT 60.355 50.000 10.63 0.00 45.85 4.00
164 165 2.010497 GCTAGCAAGCTTTAGTCCCAC 58.990 52.381 10.63 0.00 45.85 4.61
165 166 2.403252 GCTAGCAAGCTTTAGTCCCA 57.597 50.000 10.63 0.00 45.85 4.37
176 177 1.134159 AGCATGGAAGAGGCTAGCAAG 60.134 52.381 18.24 0.00 35.82 4.01
177 178 0.914644 AGCATGGAAGAGGCTAGCAA 59.085 50.000 18.24 0.00 35.82 3.91
178 179 0.467384 GAGCATGGAAGAGGCTAGCA 59.533 55.000 18.24 0.00 38.15 3.49
179 180 0.599728 CGAGCATGGAAGAGGCTAGC 60.600 60.000 6.04 6.04 38.15 3.42
180 181 0.033228 CCGAGCATGGAAGAGGCTAG 59.967 60.000 0.00 0.00 38.15 3.42
181 182 0.397114 TCCGAGCATGGAAGAGGCTA 60.397 55.000 0.00 0.00 38.15 3.93
182 183 1.053264 ATCCGAGCATGGAAGAGGCT 61.053 55.000 0.66 0.00 42.46 4.58
183 184 0.602372 GATCCGAGCATGGAAGAGGC 60.602 60.000 0.66 0.00 42.46 4.70
184 185 0.034616 GGATCCGAGCATGGAAGAGG 59.965 60.000 0.00 0.00 42.46 3.69
185 186 0.755079 TGGATCCGAGCATGGAAGAG 59.245 55.000 7.39 0.00 42.46 2.85
186 187 1.203237 TTGGATCCGAGCATGGAAGA 58.797 50.000 7.39 0.00 42.46 2.87
187 188 2.042686 TTTGGATCCGAGCATGGAAG 57.957 50.000 7.39 0.00 42.46 3.46
188 189 2.734755 ATTTGGATCCGAGCATGGAA 57.265 45.000 7.39 0.00 42.46 3.53
189 190 2.705658 AGTATTTGGATCCGAGCATGGA 59.294 45.455 7.39 0.00 43.58 3.41
190 191 3.131709 AGTATTTGGATCCGAGCATGG 57.868 47.619 7.39 0.00 0.00 3.66
191 192 5.991606 TCTTTAGTATTTGGATCCGAGCATG 59.008 40.000 7.39 0.00 0.00 4.06
192 193 6.042093 TCTCTTTAGTATTTGGATCCGAGCAT 59.958 38.462 7.39 0.00 0.00 3.79
193 194 5.362717 TCTCTTTAGTATTTGGATCCGAGCA 59.637 40.000 7.39 0.00 0.00 4.26
194 195 5.692654 GTCTCTTTAGTATTTGGATCCGAGC 59.307 44.000 7.39 0.00 0.00 5.03
195 196 7.045126 AGTCTCTTTAGTATTTGGATCCGAG 57.955 40.000 7.39 3.55 0.00 4.63
196 197 8.529424 TTAGTCTCTTTAGTATTTGGATCCGA 57.471 34.615 7.39 1.27 0.00 4.55
197 198 9.595823 TTTTAGTCTCTTTAGTATTTGGATCCG 57.404 33.333 7.39 0.00 0.00 4.18
231 232 8.810041 GGATTTGGAGGATAATAAATGCTCATT 58.190 33.333 8.48 0.00 38.10 2.57
232 233 8.175431 AGGATTTGGAGGATAATAAATGCTCAT 58.825 33.333 8.48 0.00 36.79 2.90
233 234 7.529555 AGGATTTGGAGGATAATAAATGCTCA 58.470 34.615 8.48 0.00 36.79 4.26
234 235 8.049655 GAGGATTTGGAGGATAATAAATGCTC 57.950 38.462 12.10 12.10 44.60 4.26
235 236 6.950619 GGAGGATTTGGAGGATAATAAATGCT 59.049 38.462 0.00 0.00 41.70 3.79
236 237 6.721208 TGGAGGATTTGGAGGATAATAAATGC 59.279 38.462 0.00 0.00 32.99 3.56
237 238 8.710749 TTGGAGGATTTGGAGGATAATAAATG 57.289 34.615 0.00 0.00 0.00 2.32
238 239 9.903190 AATTGGAGGATTTGGAGGATAATAAAT 57.097 29.630 0.00 0.00 0.00 1.40
239 240 9.367160 GAATTGGAGGATTTGGAGGATAATAAA 57.633 33.333 0.00 0.00 0.00 1.40
240 241 8.510283 TGAATTGGAGGATTTGGAGGATAATAA 58.490 33.333 0.00 0.00 0.00 1.40
241 242 8.056088 TGAATTGGAGGATTTGGAGGATAATA 57.944 34.615 0.00 0.00 0.00 0.98
242 243 6.925934 TGAATTGGAGGATTTGGAGGATAAT 58.074 36.000 0.00 0.00 0.00 1.28
243 244 6.160282 TCTGAATTGGAGGATTTGGAGGATAA 59.840 38.462 0.00 0.00 0.00 1.75
244 245 5.671735 TCTGAATTGGAGGATTTGGAGGATA 59.328 40.000 0.00 0.00 0.00 2.59
245 246 4.479796 TCTGAATTGGAGGATTTGGAGGAT 59.520 41.667 0.00 0.00 0.00 3.24
246 247 3.851976 TCTGAATTGGAGGATTTGGAGGA 59.148 43.478 0.00 0.00 0.00 3.71
247 248 4.240881 TCTGAATTGGAGGATTTGGAGG 57.759 45.455 0.00 0.00 0.00 4.30
248 249 5.259632 AGTTCTGAATTGGAGGATTTGGAG 58.740 41.667 0.00 0.00 0.00 3.86
249 250 5.256474 GAGTTCTGAATTGGAGGATTTGGA 58.744 41.667 0.00 0.00 0.00 3.53
250 251 4.095483 CGAGTTCTGAATTGGAGGATTTGG 59.905 45.833 0.00 0.00 0.00 3.28
251 252 4.437930 GCGAGTTCTGAATTGGAGGATTTG 60.438 45.833 0.00 0.00 0.00 2.32
252 253 3.691609 GCGAGTTCTGAATTGGAGGATTT 59.308 43.478 0.00 0.00 0.00 2.17
253 254 3.274288 GCGAGTTCTGAATTGGAGGATT 58.726 45.455 0.00 0.00 0.00 3.01
254 255 2.237143 TGCGAGTTCTGAATTGGAGGAT 59.763 45.455 0.00 0.00 0.00 3.24
255 256 1.623311 TGCGAGTTCTGAATTGGAGGA 59.377 47.619 0.00 0.00 0.00 3.71
256 257 2.099141 TGCGAGTTCTGAATTGGAGG 57.901 50.000 0.00 0.00 0.00 4.30
257 258 3.005554 ACATGCGAGTTCTGAATTGGAG 58.994 45.455 0.00 0.00 0.00 3.86
258 259 2.743664 CACATGCGAGTTCTGAATTGGA 59.256 45.455 0.00 0.00 0.00 3.53
259 260 2.485426 ACACATGCGAGTTCTGAATTGG 59.515 45.455 0.00 0.00 0.00 3.16
260 261 3.818961 ACACATGCGAGTTCTGAATTG 57.181 42.857 0.00 0.00 0.00 2.32
261 262 5.940192 TTAACACATGCGAGTTCTGAATT 57.060 34.783 0.00 0.00 0.00 2.17
262 263 5.940192 TTTAACACATGCGAGTTCTGAAT 57.060 34.783 0.00 0.00 0.00 2.57
263 264 5.277779 CCTTTTAACACATGCGAGTTCTGAA 60.278 40.000 0.00 0.00 0.00 3.02
264 265 4.213270 CCTTTTAACACATGCGAGTTCTGA 59.787 41.667 0.00 0.00 0.00 3.27
265 266 4.213270 TCCTTTTAACACATGCGAGTTCTG 59.787 41.667 0.00 0.00 0.00 3.02
266 267 4.385825 TCCTTTTAACACATGCGAGTTCT 58.614 39.130 0.00 0.00 0.00 3.01
267 268 4.451096 TCTCCTTTTAACACATGCGAGTTC 59.549 41.667 0.00 0.00 0.00 3.01
268 269 4.385825 TCTCCTTTTAACACATGCGAGTT 58.614 39.130 0.00 0.00 0.00 3.01
269 270 3.997021 CTCTCCTTTTAACACATGCGAGT 59.003 43.478 0.00 0.00 0.00 4.18
270 271 3.372206 CCTCTCCTTTTAACACATGCGAG 59.628 47.826 0.00 0.00 0.00 5.03
271 272 3.007506 TCCTCTCCTTTTAACACATGCGA 59.992 43.478 0.00 0.00 0.00 5.10
272 273 3.334691 TCCTCTCCTTTTAACACATGCG 58.665 45.455 0.00 0.00 0.00 4.73
273 274 4.327680 ACTCCTCTCCTTTTAACACATGC 58.672 43.478 0.00 0.00 0.00 4.06
274 275 7.979444 TTAACTCCTCTCCTTTTAACACATG 57.021 36.000 0.00 0.00 0.00 3.21
275 276 9.014297 CATTTAACTCCTCTCCTTTTAACACAT 57.986 33.333 0.00 0.00 0.00 3.21
276 277 8.215050 TCATTTAACTCCTCTCCTTTTAACACA 58.785 33.333 0.00 0.00 0.00 3.72
277 278 8.617290 TCATTTAACTCCTCTCCTTTTAACAC 57.383 34.615 0.00 0.00 0.00 3.32
278 279 9.284968 CTTCATTTAACTCCTCTCCTTTTAACA 57.715 33.333 0.00 0.00 0.00 2.41
279 280 9.503399 TCTTCATTTAACTCCTCTCCTTTTAAC 57.497 33.333 0.00 0.00 0.00 2.01
280 281 9.726438 CTCTTCATTTAACTCCTCTCCTTTTAA 57.274 33.333 0.00 0.00 0.00 1.52
281 282 9.101325 TCTCTTCATTTAACTCCTCTCCTTTTA 57.899 33.333 0.00 0.00 0.00 1.52
282 283 7.978925 TCTCTTCATTTAACTCCTCTCCTTTT 58.021 34.615 0.00 0.00 0.00 2.27
283 284 7.456269 TCTCTCTTCATTTAACTCCTCTCCTTT 59.544 37.037 0.00 0.00 0.00 3.11
284 285 6.957020 TCTCTCTTCATTTAACTCCTCTCCTT 59.043 38.462 0.00 0.00 0.00 3.36
285 286 6.498538 TCTCTCTTCATTTAACTCCTCTCCT 58.501 40.000 0.00 0.00 0.00 3.69
286 287 6.605594 TCTCTCTCTTCATTTAACTCCTCTCC 59.394 42.308 0.00 0.00 0.00 3.71
287 288 7.639113 TCTCTCTCTTCATTTAACTCCTCTC 57.361 40.000 0.00 0.00 0.00 3.20
288 289 7.893302 TCTTCTCTCTCTTCATTTAACTCCTCT 59.107 37.037 0.00 0.00 0.00 3.69
289 290 7.973944 GTCTTCTCTCTCTTCATTTAACTCCTC 59.026 40.741 0.00 0.00 0.00 3.71
290 291 7.673926 AGTCTTCTCTCTCTTCATTTAACTCCT 59.326 37.037 0.00 0.00 0.00 3.69
291 292 7.836842 AGTCTTCTCTCTCTTCATTTAACTCC 58.163 38.462 0.00 0.00 0.00 3.85
296 297 9.480861 TGGATTAGTCTTCTCTCTCTTCATTTA 57.519 33.333 0.00 0.00 0.00 1.40
297 298 8.257306 GTGGATTAGTCTTCTCTCTCTTCATTT 58.743 37.037 0.00 0.00 0.00 2.32
298 299 7.398618 TGTGGATTAGTCTTCTCTCTCTTCATT 59.601 37.037 0.00 0.00 0.00 2.57
299 300 6.894654 TGTGGATTAGTCTTCTCTCTCTTCAT 59.105 38.462 0.00 0.00 0.00 2.57
300 301 6.249192 TGTGGATTAGTCTTCTCTCTCTTCA 58.751 40.000 0.00 0.00 0.00 3.02
301 302 6.767524 TGTGGATTAGTCTTCTCTCTCTTC 57.232 41.667 0.00 0.00 0.00 2.87
302 303 7.732222 AATGTGGATTAGTCTTCTCTCTCTT 57.268 36.000 0.00 0.00 0.00 2.85
303 304 7.732222 AAATGTGGATTAGTCTTCTCTCTCT 57.268 36.000 0.00 0.00 0.00 3.10
304 305 9.528018 CTAAAATGTGGATTAGTCTTCTCTCTC 57.472 37.037 0.00 0.00 0.00 3.20
305 306 9.041354 ACTAAAATGTGGATTAGTCTTCTCTCT 57.959 33.333 0.00 0.00 37.73 3.10
310 311 9.535878 CCTCTACTAAAATGTGGATTAGTCTTC 57.464 37.037 1.78 0.00 40.53 2.87
311 312 9.047947 ACCTCTACTAAAATGTGGATTAGTCTT 57.952 33.333 1.78 0.00 40.53 3.01
312 313 8.611051 ACCTCTACTAAAATGTGGATTAGTCT 57.389 34.615 1.78 0.00 40.53 3.24
313 314 9.747293 GTACCTCTACTAAAATGTGGATTAGTC 57.253 37.037 1.78 0.00 40.53 2.59
314 315 8.702819 GGTACCTCTACTAAAATGTGGATTAGT 58.297 37.037 4.06 3.93 43.05 2.24
336 337 2.546652 AAGAGGGTAGTCAGGGGTAC 57.453 55.000 0.00 0.00 0.00 3.34
337 338 3.599698 ACTAAAGAGGGTAGTCAGGGGTA 59.400 47.826 0.00 0.00 0.00 3.69
338 339 2.386113 ACTAAAGAGGGTAGTCAGGGGT 59.614 50.000 0.00 0.00 0.00 4.95
339 340 3.032459 GACTAAAGAGGGTAGTCAGGGG 58.968 54.545 6.70 0.00 44.59 4.79
344 345 3.032459 CCCCTGACTAAAGAGGGTAGTC 58.968 54.545 0.00 4.93 46.96 2.59
345 346 3.117552 CCCCTGACTAAAGAGGGTAGT 57.882 52.381 0.00 0.00 46.96 2.73
350 351 1.280457 AGCACCCCTGACTAAAGAGG 58.720 55.000 0.00 0.00 0.00 3.69
351 352 2.616510 CCAAGCACCCCTGACTAAAGAG 60.617 54.545 0.00 0.00 0.00 2.85
352 353 1.351017 CCAAGCACCCCTGACTAAAGA 59.649 52.381 0.00 0.00 0.00 2.52
353 354 1.351017 TCCAAGCACCCCTGACTAAAG 59.649 52.381 0.00 0.00 0.00 1.85
354 355 1.440618 TCCAAGCACCCCTGACTAAA 58.559 50.000 0.00 0.00 0.00 1.85
355 356 1.073284 GTTCCAAGCACCCCTGACTAA 59.927 52.381 0.00 0.00 0.00 2.24
356 357 0.690762 GTTCCAAGCACCCCTGACTA 59.309 55.000 0.00 0.00 0.00 2.59
357 358 1.062488 AGTTCCAAGCACCCCTGACT 61.062 55.000 0.00 0.00 0.00 3.41
358 359 0.178990 AAGTTCCAAGCACCCCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
359 360 0.555769 AAAGTTCCAAGCACCCCTGA 59.444 50.000 0.00 0.00 0.00 3.86
360 361 2.162681 CTAAAGTTCCAAGCACCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
361 362 1.547901 GCTAAAGTTCCAAGCACCCCT 60.548 52.381 0.00 0.00 36.26 4.79
362 363 0.888619 GCTAAAGTTCCAAGCACCCC 59.111 55.000 0.00 0.00 36.26 4.95
363 364 0.888619 GGCTAAAGTTCCAAGCACCC 59.111 55.000 7.02 0.00 38.01 4.61
364 365 1.911057 AGGCTAAAGTTCCAAGCACC 58.089 50.000 7.02 0.00 38.01 5.01
365 366 4.322080 AAAAGGCTAAAGTTCCAAGCAC 57.678 40.909 0.00 0.00 38.01 4.40
366 367 7.172342 TCTATAAAAGGCTAAAGTTCCAAGCA 58.828 34.615 0.00 0.00 38.01 3.91
367 368 7.553044 TCTCTATAAAAGGCTAAAGTTCCAAGC 59.447 37.037 0.00 0.00 35.47 4.01
368 369 8.884726 GTCTCTATAAAAGGCTAAAGTTCCAAG 58.115 37.037 0.00 0.00 0.00 3.61
369 370 8.603304 AGTCTCTATAAAAGGCTAAAGTTCCAA 58.397 33.333 0.00 0.00 0.00 3.53
370 371 8.147244 AGTCTCTATAAAAGGCTAAAGTTCCA 57.853 34.615 0.00 0.00 0.00 3.53
400 401 9.292195 CCAAAGGACTTATTTTAGTTTGACCTA 57.708 33.333 0.00 0.00 0.00 3.08
401 402 8.002459 TCCAAAGGACTTATTTTAGTTTGACCT 58.998 33.333 0.00 0.00 0.00 3.85
402 403 8.173542 TCCAAAGGACTTATTTTAGTTTGACC 57.826 34.615 0.00 0.00 0.00 4.02
410 411 9.974980 GTGTTTGAATCCAAAGGACTTATTTTA 57.025 29.630 0.00 0.00 42.37 1.52
411 412 7.931407 GGTGTTTGAATCCAAAGGACTTATTTT 59.069 33.333 0.00 0.00 42.37 1.82
412 413 7.441836 GGTGTTTGAATCCAAAGGACTTATTT 58.558 34.615 0.00 0.00 42.37 1.40
413 414 6.014584 GGGTGTTTGAATCCAAAGGACTTATT 60.015 38.462 0.00 0.00 42.37 1.40
414 415 5.480422 GGGTGTTTGAATCCAAAGGACTTAT 59.520 40.000 0.00 0.00 42.37 1.73
415 416 4.830600 GGGTGTTTGAATCCAAAGGACTTA 59.169 41.667 0.00 0.00 42.37 2.24
416 417 3.641436 GGGTGTTTGAATCCAAAGGACTT 59.359 43.478 0.00 0.00 42.37 3.01
417 418 3.117131 AGGGTGTTTGAATCCAAAGGACT 60.117 43.478 0.00 0.00 42.37 3.85
418 419 3.230976 AGGGTGTTTGAATCCAAAGGAC 58.769 45.455 0.00 0.00 42.37 3.85
419 420 3.140144 AGAGGGTGTTTGAATCCAAAGGA 59.860 43.478 0.00 0.00 42.37 3.36
420 421 3.256631 CAGAGGGTGTTTGAATCCAAAGG 59.743 47.826 0.00 0.00 42.37 3.11
421 422 4.144297 TCAGAGGGTGTTTGAATCCAAAG 58.856 43.478 0.00 0.00 42.37 2.77
422 423 4.177537 TCAGAGGGTGTTTGAATCCAAA 57.822 40.909 0.00 0.00 39.74 3.28
423 424 3.874383 TCAGAGGGTGTTTGAATCCAA 57.126 42.857 0.00 0.00 0.00 3.53
424 425 4.202556 TGAATCAGAGGGTGTTTGAATCCA 60.203 41.667 0.00 0.00 0.00 3.41
425 426 4.335416 TGAATCAGAGGGTGTTTGAATCC 58.665 43.478 0.00 0.00 0.00 3.01
426 427 6.151648 TCAATGAATCAGAGGGTGTTTGAATC 59.848 38.462 0.00 0.00 0.00 2.52
427 428 6.012113 TCAATGAATCAGAGGGTGTTTGAAT 58.988 36.000 0.00 0.00 0.00 2.57
428 429 5.384336 TCAATGAATCAGAGGGTGTTTGAA 58.616 37.500 0.00 0.00 0.00 2.69
429 430 4.984295 TCAATGAATCAGAGGGTGTTTGA 58.016 39.130 0.00 0.00 0.00 2.69
430 431 4.157289 CCTCAATGAATCAGAGGGTGTTTG 59.843 45.833 9.89 0.00 44.10 2.93
431 432 4.338879 CCTCAATGAATCAGAGGGTGTTT 58.661 43.478 9.89 0.00 44.10 2.83
432 433 3.960571 CCTCAATGAATCAGAGGGTGTT 58.039 45.455 9.89 0.00 44.10 3.32
433 434 3.641434 CCTCAATGAATCAGAGGGTGT 57.359 47.619 9.89 0.00 44.10 4.16
435 436 4.476113 TTCATCCTCAATGAATCAGAGGGT 59.524 41.667 15.75 8.27 46.96 4.34
436 437 5.045012 TTCATCCTCAATGAATCAGAGGG 57.955 43.478 15.75 4.31 46.96 4.30
445 446 3.208594 CTCGCCAATTCATCCTCAATGA 58.791 45.455 0.00 0.00 42.76 2.57
446 447 2.947652 ACTCGCCAATTCATCCTCAATG 59.052 45.455 0.00 0.00 36.65 2.82
447 448 3.287867 ACTCGCCAATTCATCCTCAAT 57.712 42.857 0.00 0.00 0.00 2.57
448 449 2.749076 CAACTCGCCAATTCATCCTCAA 59.251 45.455 0.00 0.00 0.00 3.02
449 450 2.290260 ACAACTCGCCAATTCATCCTCA 60.290 45.455 0.00 0.00 0.00 3.86
450 451 2.359900 ACAACTCGCCAATTCATCCTC 58.640 47.619 0.00 0.00 0.00 3.71
451 452 2.496899 ACAACTCGCCAATTCATCCT 57.503 45.000 0.00 0.00 0.00 3.24
452 453 4.662145 CTTTACAACTCGCCAATTCATCC 58.338 43.478 0.00 0.00 0.00 3.51
453 454 4.098416 GCTTTACAACTCGCCAATTCATC 58.902 43.478 0.00 0.00 0.00 2.92
454 455 3.426159 CGCTTTACAACTCGCCAATTCAT 60.426 43.478 0.00 0.00 0.00 2.57
455 456 2.095969 CGCTTTACAACTCGCCAATTCA 60.096 45.455 0.00 0.00 0.00 2.57
456 457 2.158841 TCGCTTTACAACTCGCCAATTC 59.841 45.455 0.00 0.00 0.00 2.17
457 458 2.147958 TCGCTTTACAACTCGCCAATT 58.852 42.857 0.00 0.00 0.00 2.32
458 459 1.732259 CTCGCTTTACAACTCGCCAAT 59.268 47.619 0.00 0.00 0.00 3.16
459 460 1.144969 CTCGCTTTACAACTCGCCAA 58.855 50.000 0.00 0.00 0.00 4.52
460 461 0.315886 TCTCGCTTTACAACTCGCCA 59.684 50.000 0.00 0.00 0.00 5.69
473 474 0.177604 CAGGATGCCTTCTTCTCGCT 59.822 55.000 0.00 0.00 0.00 4.93
569 597 1.202428 GGTACTGCTACAGCCTACAGC 60.202 57.143 0.00 0.00 41.18 4.40
570 598 2.100197 TGGTACTGCTACAGCCTACAG 58.900 52.381 0.00 0.00 41.18 2.74
571 599 1.822990 GTGGTACTGCTACAGCCTACA 59.177 52.381 0.00 0.00 41.18 2.74
572 600 2.100989 AGTGGTACTGCTACAGCCTAC 58.899 52.381 0.00 0.00 41.18 3.18
573 601 2.526888 AGTGGTACTGCTACAGCCTA 57.473 50.000 0.00 0.00 41.18 3.93
574 602 2.526888 TAGTGGTACTGCTACAGCCT 57.473 50.000 0.00 0.00 41.18 4.58
575 603 3.385111 AGATTAGTGGTACTGCTACAGCC 59.615 47.826 0.00 0.00 41.18 4.85
604 643 3.195661 CGGACTAGGAATTTTTCGAGGG 58.804 50.000 0.00 0.00 0.00 4.30
605 644 3.195661 CCGGACTAGGAATTTTTCGAGG 58.804 50.000 0.00 0.00 0.00 4.63
606 645 2.608090 GCCGGACTAGGAATTTTTCGAG 59.392 50.000 5.05 0.00 0.00 4.04
607 646 2.624636 GCCGGACTAGGAATTTTTCGA 58.375 47.619 5.05 0.00 0.00 3.71
608 647 1.326548 CGCCGGACTAGGAATTTTTCG 59.673 52.381 5.05 0.00 0.00 3.46
609 648 1.669265 CCGCCGGACTAGGAATTTTTC 59.331 52.381 5.05 0.00 0.00 2.29
610 649 1.279846 TCCGCCGGACTAGGAATTTTT 59.720 47.619 5.05 0.00 0.00 1.94
611 650 0.906775 TCCGCCGGACTAGGAATTTT 59.093 50.000 5.05 0.00 0.00 1.82
612 651 2.599216 TCCGCCGGACTAGGAATTT 58.401 52.632 5.05 0.00 0.00 1.82
613 652 4.368003 TCCGCCGGACTAGGAATT 57.632 55.556 5.05 0.00 0.00 2.17
701 925 0.811616 GGTTGGGTGCTGCGATAGAG 60.812 60.000 0.00 0.00 39.76 2.43
702 926 1.220749 GGTTGGGTGCTGCGATAGA 59.779 57.895 0.00 0.00 39.76 1.98
703 927 1.078497 TGGTTGGGTGCTGCGATAG 60.078 57.895 0.00 0.00 0.00 2.08
705 929 2.672996 GTGGTTGGGTGCTGCGAT 60.673 61.111 0.00 0.00 0.00 4.58
708 932 4.912395 TGGGTGGTTGGGTGCTGC 62.912 66.667 0.00 0.00 0.00 5.25
748 980 1.002773 GCAAGTCTTAACGGAGGGGAA 59.997 52.381 0.00 0.00 0.00 3.97
793 1025 1.303806 CCAACGGTCGGGGGATTTT 60.304 57.895 0.00 0.00 0.00 1.82
873 1107 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
874 1108 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
875 1109 1.675007 AGAAGGGAAGGGAAGGGAAG 58.325 55.000 0.00 0.00 0.00 3.46
876 1110 1.993301 GAAGAAGGGAAGGGAAGGGAA 59.007 52.381 0.00 0.00 0.00 3.97
877 1111 1.154434 AGAAGAAGGGAAGGGAAGGGA 59.846 52.381 0.00 0.00 0.00 4.20
878 1112 1.562008 GAGAAGAAGGGAAGGGAAGGG 59.438 57.143 0.00 0.00 0.00 3.95
879 1113 1.562008 GGAGAAGAAGGGAAGGGAAGG 59.438 57.143 0.00 0.00 0.00 3.46
880 1114 1.562008 GGGAGAAGAAGGGAAGGGAAG 59.438 57.143 0.00 0.00 0.00 3.46
881 1115 1.670059 GGGAGAAGAAGGGAAGGGAA 58.330 55.000 0.00 0.00 0.00 3.97
882 1116 0.253207 GGGGAGAAGAAGGGAAGGGA 60.253 60.000 0.00 0.00 0.00 4.20
919 1158 2.236146 GGATGTGGTGGTGTGAGATGTA 59.764 50.000 0.00 0.00 0.00 2.29
925 1164 1.826340 CTCCGGATGTGGTGGTGTGA 61.826 60.000 3.57 0.00 0.00 3.58
945 1184 4.262894 CGAGCTAGGGTTCTCTCTCTATCT 60.263 50.000 0.00 0.00 0.00 1.98
948 1187 2.485835 GCGAGCTAGGGTTCTCTCTCTA 60.486 54.545 0.00 0.00 0.00 2.43
1204 1468 4.821589 GAGAAGGCGCGTGGAGGG 62.822 72.222 8.43 0.00 0.00 4.30
1205 1469 3.708220 GAGAGAAGGCGCGTGGAGG 62.708 68.421 8.43 0.00 0.00 4.30
1215 1479 3.542648 GGTAAATTTCCGGGAGAGAAGG 58.457 50.000 0.00 0.00 0.00 3.46
1274 1538 1.521681 CTTGATCCTCGGGGCGAAC 60.522 63.158 0.00 0.00 34.74 3.95
1302 1566 1.801332 CGTCGATCTTGACCTCCGT 59.199 57.895 0.00 0.00 35.40 4.69
1507 1771 0.405585 ATATCCCCTGCCGGATTTGG 59.594 55.000 5.05 0.00 39.80 3.28
1622 1918 5.102313 CGAGGTCCAAATAGGCAATTTTTC 58.898 41.667 0.00 0.00 35.54 2.29
1623 1919 4.526650 ACGAGGTCCAAATAGGCAATTTTT 59.473 37.500 0.00 0.00 35.54 1.94
1870 2167 7.902387 ATGTCGATATCAGAATTGAGGAATG 57.098 36.000 3.12 0.00 36.61 2.67
1879 2176 3.742882 CACGGCAATGTCGATATCAGAAT 59.257 43.478 16.16 0.00 33.65 2.40
1986 2286 1.003545 CTTCACTGTTGACTTGGCACG 60.004 52.381 0.00 0.00 0.00 5.34
1987 2287 1.334869 CCTTCACTGTTGACTTGGCAC 59.665 52.381 0.00 0.00 0.00 5.01
1988 2288 1.679139 CCTTCACTGTTGACTTGGCA 58.321 50.000 0.00 0.00 0.00 4.92
2113 2413 8.815189 CATGCATATATTTCTCCTACTTGATCG 58.185 37.037 0.00 0.00 0.00 3.69
2165 2465 3.004315 GCGAACCATCTCAAACTTTGGAA 59.996 43.478 1.62 0.00 33.36 3.53
2185 2485 1.722011 ACCCAGAACATCGTTAAGCG 58.278 50.000 0.00 0.00 43.01 4.68
2269 2569 1.891150 ACAGCCTGATTTTCTTGCCTG 59.109 47.619 0.00 0.00 0.00 4.85
2342 2642 7.328737 ACATGGACAAGTTCTACCAGTAATAC 58.671 38.462 0.00 0.00 35.84 1.89
2352 2652 6.041637 AGTTCACAGTACATGGACAAGTTCTA 59.958 38.462 11.55 0.00 0.00 2.10
2387 2687 3.555547 CGTTCAATATCTGGTCATCGCAA 59.444 43.478 0.00 0.00 0.00 4.85
2428 2728 7.639113 AAACTACAACATCTTCCTTTGTGAA 57.361 32.000 0.00 0.00 35.18 3.18
2442 2742 5.001232 GGTGCTTCCTGATAAACTACAACA 58.999 41.667 0.00 0.00 0.00 3.33
2443 2743 4.092968 CGGTGCTTCCTGATAAACTACAAC 59.907 45.833 0.00 0.00 0.00 3.32
2444 2744 4.020928 TCGGTGCTTCCTGATAAACTACAA 60.021 41.667 0.00 0.00 0.00 2.41
2454 2754 2.583441 CCACCTCGGTGCTTCCTGA 61.583 63.158 10.59 0.00 44.16 3.86
2473 2773 1.555075 GGTGCCTCATGGAAGACTGTA 59.445 52.381 0.00 0.00 34.57 2.74
2704 3038 3.067461 CCAAATCTCTAGTCCCTGACTCG 59.933 52.174 0.00 0.00 42.40 4.18
2817 3151 1.605710 GAACTGCTATCATGCGCCAAT 59.394 47.619 4.18 0.00 35.36 3.16
2927 3263 9.755804 TGTTCTGCAATATGAATTAAACAACAA 57.244 25.926 0.00 0.00 0.00 2.83
2928 3264 9.755804 TTGTTCTGCAATATGAATTAAACAACA 57.244 25.926 0.00 0.00 31.35 3.33
2931 3267 9.926158 ACATTGTTCTGCAATATGAATTAAACA 57.074 25.926 0.00 0.00 45.33 2.83
2967 3303 8.089597 ACAACAATTCACAATGAGCATTATGAA 58.910 29.630 16.43 16.43 44.97 2.57
2968 3304 7.604549 ACAACAATTCACAATGAGCATTATGA 58.395 30.769 0.34 0.34 32.92 2.15
2969 3305 7.821595 ACAACAATTCACAATGAGCATTATG 57.178 32.000 0.00 0.00 0.00 1.90
2970 3306 7.874016 ACAACAACAATTCACAATGAGCATTAT 59.126 29.630 0.00 0.00 0.00 1.28
2971 3307 7.208777 ACAACAACAATTCACAATGAGCATTA 58.791 30.769 0.00 0.00 0.00 1.90
2972 3308 6.050432 ACAACAACAATTCACAATGAGCATT 58.950 32.000 0.00 0.00 0.00 3.56
3024 3360 8.266473 TGTGGAAAGGACTACTTAAACTTACAA 58.734 33.333 0.00 0.00 38.85 2.41
3230 3567 9.579610 CAAGAAAAATAAATTAAACAACGGCAG 57.420 29.630 0.00 0.00 0.00 4.85
3261 3598 5.952347 TGCTAGTGGAGATATCCGTATCATT 59.048 40.000 1.12 0.00 39.36 2.57
3268 3605 3.511540 TGGATTGCTAGTGGAGATATCCG 59.488 47.826 1.12 0.00 38.54 4.18
3642 4021 0.458716 GAGGGAAAGACGGAGCTTCG 60.459 60.000 14.32 14.32 0.00 3.79
3690 4109 8.317891 ACAGTCAAATACGTACATTGAATTCA 57.682 30.769 20.91 3.38 35.07 2.57
3804 4223 0.673437 TGTGTCAGCATGTCGAGACA 59.327 50.000 8.48 8.48 46.44 3.41
3881 4300 4.023622 CCACAATCAACAACATAACGTGGA 60.024 41.667 0.00 0.00 43.20 4.02
4026 4457 8.905702 CAGCACAGTAAAAGTGATTATTGTTTC 58.094 33.333 0.00 0.00 39.30 2.78
4063 4494 7.602644 TGTTAAAGCTCATGTTAGAGTCGAATT 59.397 33.333 0.00 0.00 37.94 2.17
4079 4510 3.902150 GCTTTTCACCCTGTTAAAGCTC 58.098 45.455 10.26 0.00 45.47 4.09
4100 4534 4.467795 TCCTCTAGTTCCAATTCCTGAGTG 59.532 45.833 0.00 0.00 0.00 3.51
4121 4555 2.899303 TGGGGACTTTCTCCAATTCC 57.101 50.000 0.00 0.00 45.82 3.01
4135 4569 0.178964 CTTGGCCTTGAACTTGGGGA 60.179 55.000 3.32 0.00 0.00 4.81
4215 4649 6.127366 GGAATGATGTTCAGGCTAATTTTCCA 60.127 38.462 0.00 0.00 0.00 3.53
4773 5207 0.179936 GTCAAGAGATGGCCTGGGAG 59.820 60.000 3.32 0.00 0.00 4.30
4790 5224 1.541588 GGCACCTGAGTGGAAAATGTC 59.458 52.381 0.00 0.00 44.69 3.06
4984 5418 0.953960 CGTAGGACAAGGGGTTGCAC 60.954 60.000 0.00 0.00 0.00 4.57
4990 5424 0.453390 GTCGTACGTAGGACAAGGGG 59.547 60.000 32.59 0.00 39.96 4.79
4992 5426 1.399791 GAGGTCGTACGTAGGACAAGG 59.600 57.143 35.76 8.63 41.47 3.61
5023 5457 4.104086 TCTGAGCCTCTTCCCAGATAAAA 58.896 43.478 0.00 0.00 31.45 1.52
5031 5465 0.032615 TCTCCTCTGAGCCTCTTCCC 60.033 60.000 0.00 0.00 38.58 3.97
5032 5466 1.859302 TTCTCCTCTGAGCCTCTTCC 58.141 55.000 0.00 0.00 38.58 3.46
5033 5467 4.486125 AAATTCTCCTCTGAGCCTCTTC 57.514 45.455 0.00 0.00 38.58 2.87
5034 5468 5.664908 TCATAAATTCTCCTCTGAGCCTCTT 59.335 40.000 0.00 0.00 38.58 2.85
5035 5469 5.215069 TCATAAATTCTCCTCTGAGCCTCT 58.785 41.667 0.00 0.00 38.58 3.69
5036 5470 5.543507 TCATAAATTCTCCTCTGAGCCTC 57.456 43.478 0.00 0.00 38.58 4.70
5037 5471 6.556495 TGTATCATAAATTCTCCTCTGAGCCT 59.444 38.462 0.00 0.00 38.58 4.58
5227 5666 3.728385 ATAGAAGGAGCAAAAGCAGGT 57.272 42.857 0.00 0.00 0.00 4.00
5388 5845 3.112075 CAAGGATGCGTCGCGTGT 61.112 61.111 18.30 2.56 0.00 4.49
5389 5846 4.505217 GCAAGGATGCGTCGCGTG 62.505 66.667 18.30 8.36 43.83 5.34
5398 5855 1.081892 CTGACGAACAGGCAAGGATG 58.918 55.000 0.00 0.00 42.39 3.51
5399 5856 0.674895 GCTGACGAACAGGCAAGGAT 60.675 55.000 13.82 0.00 45.82 3.24
5400 5857 1.301716 GCTGACGAACAGGCAAGGA 60.302 57.895 13.82 0.00 45.82 3.36
5444 5901 2.165319 ACAGAAGTTGGTTAGTCGCC 57.835 50.000 0.00 0.00 0.00 5.54
5458 5915 9.150348 CTTCACACACACATTACATATACAGAA 57.850 33.333 0.00 0.00 0.00 3.02
5610 6069 1.421268 TCATTCACCTGAAGCTGTGGT 59.579 47.619 2.42 1.36 37.48 4.16
5684 6149 1.753649 GTACAGCAGATGGAGAGCAGA 59.246 52.381 0.00 0.00 0.00 4.26
5711 6186 0.035056 ATCTTGGCGTCAGGGGAAAG 60.035 55.000 0.00 0.00 0.00 2.62
5912 6404 9.208022 CAAGTTGTCTATCAAAATAGTGAGACA 57.792 33.333 0.00 0.00 37.81 3.41
5929 6421 0.393077 AGCGGCACTACAAGTTGTCT 59.607 50.000 12.82 0.00 0.00 3.41
5930 6422 1.226746 AAGCGGCACTACAAGTTGTC 58.773 50.000 12.82 0.00 0.00 3.18
5959 6451 0.671251 TAAGTTTTGCAGCAACGGGG 59.329 50.000 7.54 0.00 0.00 5.73
5977 6469 7.315142 CCTTCAAATAGAACAAAAGCAGCATA 58.685 34.615 0.00 0.00 31.61 3.14
5978 6470 6.161381 CCTTCAAATAGAACAAAAGCAGCAT 58.839 36.000 0.00 0.00 31.61 3.79
6071 6573 8.705048 ATTATTTTCGTCCTCTTCTTGTAGAC 57.295 34.615 0.00 0.00 0.00 2.59
6072 6574 8.750298 AGATTATTTTCGTCCTCTTCTTGTAGA 58.250 33.333 0.00 0.00 0.00 2.59
6074 6576 9.720769 AAAGATTATTTTCGTCCTCTTCTTGTA 57.279 29.630 0.00 0.00 0.00 2.41
6076 6578 7.965107 CCAAAGATTATTTTCGTCCTCTTCTTG 59.035 37.037 0.00 0.00 0.00 3.02
6084 6586 9.023967 CATTTCATCCAAAGATTATTTTCGTCC 57.976 33.333 0.00 0.00 0.00 4.79
6162 6727 2.859165 ATGGACGAAAAGAGAAGCCA 57.141 45.000 0.00 0.00 0.00 4.75
6176 6741 2.674796 AAGAAGCGAGGTGTATGGAC 57.325 50.000 0.00 0.00 0.00 4.02
6203 6775 2.251040 TCGAGAAGTCGCTTTCATTCG 58.749 47.619 2.35 3.79 46.39 3.34
6209 6781 3.372660 AGAAACTCGAGAAGTCGCTTT 57.627 42.857 21.68 7.05 46.39 3.51
6215 6787 3.381949 CCGACAAAGAAACTCGAGAAGT 58.618 45.455 21.68 2.89 41.10 3.01
6220 6792 0.601841 GGGCCGACAAAGAAACTCGA 60.602 55.000 0.00 0.00 0.00 4.04
6231 6803 4.308458 CCAACAGACGGGCCGACA 62.308 66.667 35.78 0.00 0.00 4.35
6246 6818 0.900182 AGTCACGCTCAGACCATCCA 60.900 55.000 0.00 0.00 36.68 3.41
6249 6821 0.613292 AGGAGTCACGCTCAGACCAT 60.613 55.000 0.00 0.00 45.88 3.55
6254 6826 2.447244 AAAAGAGGAGTCACGCTCAG 57.553 50.000 0.00 0.00 45.88 3.35
6283 6855 4.459089 GAGAGGCTGGCGGTGGTC 62.459 72.222 0.00 0.00 0.00 4.02
6310 6882 1.730451 AAAAACTTCCGGCCACCGTG 61.730 55.000 2.24 0.00 46.80 4.94
6315 6887 1.512156 GCTCGAAAAACTTCCGGCCA 61.512 55.000 2.24 0.00 0.00 5.36
6323 6895 5.007724 CACCTCAACTAAAGCTCGAAAAACT 59.992 40.000 0.00 0.00 0.00 2.66
6330 6902 2.457366 ACCACCTCAACTAAAGCTCG 57.543 50.000 0.00 0.00 0.00 5.03
6338 6910 2.031870 GCTCCAAAAACCACCTCAACT 58.968 47.619 0.00 0.00 0.00 3.16
6362 6970 7.141758 AGAAATGGCTCACCTAGAATTCATA 57.858 36.000 8.44 0.00 36.63 2.15
6364 6972 5.441718 AGAAATGGCTCACCTAGAATTCA 57.558 39.130 8.44 0.00 36.63 2.57
6441 7052 1.007387 GAAGCAACCAAACCTGCCG 60.007 57.895 0.00 0.00 39.47 5.69
6477 7088 1.464608 CAACCGAGCGACAACATCATT 59.535 47.619 0.00 0.00 0.00 2.57
6530 7141 3.744559 GAGCAAACCTCGGTGCAA 58.255 55.556 0.00 0.00 43.42 4.08
6578 7189 7.591421 AATGCATGGATATCAACATGAAGAA 57.409 32.000 20.05 7.42 45.55 2.52
6584 7195 8.795842 AAAACAAAATGCATGGATATCAACAT 57.204 26.923 0.00 0.00 0.00 2.71
6624 7237 4.926832 TCGAACAGACAAATTCTATCGCAA 59.073 37.500 0.00 0.00 40.32 4.85
6638 7251 5.728898 GCATGGATCTCAATTTCGAACAGAC 60.729 44.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.